Cow genome map
| Conread name: | Pla1-C0000024_G03 |
| Conread position: | 5-342 |
| Cow position: | chr1:13581493-13581158 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 5-343 |
| Cow position: | chr1:24442865-24442524 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 118, 65 |
| Conread position: | 6-283 |
| Cow position: | chr1:61590700-61590416 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 117, 51 |
| Conread position: | 14-384 |
| Cow position: | chr1:32566419-32566062 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 47 |
| Conread position: | 24-343 |
| Cow position: | chr1:81927161-81926839 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 91 |
| Conread position: | 25-343 |
| Cow position: | chr1:72137498-72137826 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 35-343 |
| Cow position: | chr1:27112911-27112600 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 66-311 |
| Cow position: | chr1:87969869-87970112 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 83-343 |
| Cow position: | chr1:50988727-50988462 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 42, 171 |
| Conread position: | 85-339 |
| Cow position: | chr1:30520358-30520621 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 172 |
| Conread position: | 89-384 |
| Cow position: | chr1:61729678-61729381 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 60 |
| Conread position: | 186-384 |
| Cow position: | chr1:44142437-44142243 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 26, 67 |
| Conread position: | 5-384 |
| Cow position: | chr10:46192658-46193036 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 8-343 |
| Cow position: | chr10:22908951-22908607 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 80, 104 |
| Conread position: | 9-343 |
| Cow position: | chr10:21079128-21079482 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 319 |
| Conread position: | 29-343 |
| Cow position: | chr10:29101192-29100864 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 35-356 |
| Cow position: | chr10:39877880-39877555 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 36-384 |
| Cow position: | chr10:22583501-22583160 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 89, 18 |
| Conread position: | 75-353 |
| Cow position: | chr10:32828458-32828743 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 77-383 |
| Cow position: | chr10:6258905-6258599 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 119-343 |
| Cow position: | chr10:14844387-14844616 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 6-343 |
| Cow position: | chr11:29231820-29231481 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 117, 57 |
| Conread position: | 10-343 |
| Cow position: | chr11:21475273-21475618 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 70-343 |
| Cow position: | chr11:46779638-46779363 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 20, 141 |
| Conread position: | 74-384 |
| Cow position: | chr11:4268956-4268633 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 20, 181 |
| Conread position: | 109-302 |
| Cow position: | chr12:11193819-11194012 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 14, 108 |
| Conread position: | 109-302 |
| Cow position: | chr12:11205090-11205283 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 14, 108 |
| Conread position: | 6-343 |
| Cow position: | chr13:6666921-6666571 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 36, 252 |
| Conread position: | 9-343 |
| Cow position: | chr13:13326148-13326492 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 16-284 |
| Cow position: | chr13:15449912-15449643 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 69-343 |
| Cow position: | chr13:5624460-5624181 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 69-343 |
| Cow position: | chr13:34049989-34050268 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 25, 187 |
| Conread position: | 90-343 |
| Cow position: | chr13:19128328-19128071 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 76-361 |
| Cow position: | chr14:45086391-45086677 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 103-343 |
| Cow position: | chr14:42122383-42122139 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 153 |
| Conread position: | 3-343 |
| Cow position: | chr15:20355499-20355160 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 52 |
| Conread position: | 23-384 |
| Cow position: | chr15:21948052-21947693 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 54-339 |
| Cow position: | chr15:14576158-14575861 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 66-318 |
| Cow position: | chr15:17149271-17149524 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 99-343 |
| Cow position: | chr15:35844193-35844435 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 154-386 |
| Cow position: | chr15:29342768-29342524 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 78 |
| Conread position: | 207-387 |
| Cow position: | chr15:24041576-24041744 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-343 |
| Cow position: | chr16:2238011-2237671 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 120, 56 |
| Conread position: | 30-343 |
| Cow position: | chr16:41572165-41572498 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 31-343 |
| Cow position: | chr16:37480078-37479757 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 96-384 |
| Cow position: | chr16:23251127-23250852 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 114 |
| Conread position: | 28-343 |
| Cow position: | chr17:20099130-20098811 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 103-343 |
| Cow position: | chr17:19980712-19980465 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 20, 151 |
| Conread position: | 6-347 |
| Cow position: | chr18:14417506-14417854 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 20-245 |
| Cow position: | chr18:12237728-12237958 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 37, 170 |
| Conread position: | 72-374 |
| Cow position: | chr18:4947557-4947859 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 116, 18 |
| Conread position: | 187-342 |
| Cow position: | chr18:1045999-1046156 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 230-383 |
| Cow position: | chr18:12238207-12238354 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-384 |
| Cow position: | chr19:40471168-40470783 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 2-384 |
| Cow position: | chr19:48860224-48859841 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 53 |
| Conread position: | 4-343 |
| Cow position: | chr19:1583794-1584139 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 58 |
| Conread position: | 71-343 |
| Cow position: | chr19:14159557-14159287 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 53, 32 |
| Conread position: | 72-384 |
| Cow position: | chr19:5730448-5730759 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 76-343 |
| Cow position: | chr19:1660273-1660560 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 102-337 |
| Cow position: | chr19:11900348-11900607 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 152-343 |
| Cow position: | chr19:1489382-1489188 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 3-245 |
| Cow position: | chr2:45967053-45966813 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 77, 52 |
| Conread position: | 3-343 |
| Cow position: | chr2:45915860-45915507 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 116, 194 |
| Conread position: | 5-343 |
| Cow position: | chr2:5903358-5903017 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 54-332 |
| Cow position: | chr2:34594941-34594656 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 119-343 |
| Cow position: | chr2:31454559-31454789 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 72, 175 |
| Conread position: | 7-343 |
| Cow position: | chr20:30429769-30430117 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 35, 252 |
| Conread position: | 10-343 |
| Cow position: | chr20:25849320-25848986 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 25-243 |
| Cow position: | chr20:13499631-13499853 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 98, 37 |
| Conread position: | 26-343 |
| Cow position: | chr20:18323445-18323104 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 28, 57 |
| Conread position: | 4-343 |
| Cow position: | chr21:31514701-31514358 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 38, 57 |
| Conread position: | 6-343 |
| Cow position: | chr21:36979294-36978944 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 239 |
| Conread position: | 9-343 |
| Cow position: | chr21:4565076-4565419 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 81 |
| Conread position: | 11-361 |
| Cow position: | chr21:3780388-3780751 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 31, 254 |
| Conread position: | 22-343 |
| Cow position: | chr21:34000460-34000119 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 42, 150 |
| Conread position: | 34-342 |
| Cow position: | chr21:1688528-1688215 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 71-302 |
| Cow position: | chr21:2712590-2712811 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 107-384 |
| Cow position: | chr21:23651878-23652154 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 111 |
| Conread position: | 112-339 |
| Cow position: | chr21:42915526-42915759 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 119 |
| Conread position: | 7-343 |
| Cow position: | chr22:296885-297236 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 35, 247 |
| Conread position: | 71-290 |
| Cow position: | chr22:37135271-37135493 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 71-342 |
| Cow position: | chr22:39450319-39450594 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 71-347 |
| Cow position: | chr22:30146737-30147019 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 74-343 |
| Cow position: | chr22:46422364-46422093 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 79 |
| Conread position: | 85-343 |
| Cow position: | chr22:1323671-1323935 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 169 |
| Conread position: | 112-355 |
| Cow position: | chr22:37413233-37413479 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 53 |
| Conread position: | 201-384 |
| Cow position: | chr22:3272425-3272250 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 239-343 |
| Cow position: | chr22:36560378-36560272 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 239-384 |
| Cow position: | chr22:36574324-36574190 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 6-343 |
| Cow position: | chr23:4639154-4638814 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 8-345 |
| Cow position: | chr23:26838256-26838615 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 11-343 |
| Cow position: | chr23:22145867-22145522 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 68-343 |
| Cow position: | chr23:4435153-4435438 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 188-338 |
| Cow position: | chr23:6220906-6221063 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 7-361 |
| Cow position: | chr24:14755523-14755889 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 257 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 35, 249 |
| Conread position: | 9-334 |
| Cow position: | chr24:14870805-14870460 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 106 |
| Conread position: | 30-339 |
| Cow position: | chr24:17957995-17957662 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 107-350 |
| Cow position: | chr24:35840266-35840011 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 16, 179 |
| Conread position: | 11-343 |
| Cow position: | chr25:20097910-20098250 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 27, 80 |
| Conread position: | 119-343 |
| Cow position: | chr25:29152455-29152223 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 151 |
| Conread position: | 88-343 |
| Cow position: | chr26:17322218-17322488 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 12-384 |
| Cow position: | chr27:25085003-25085382 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 270 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 22-343 |
| Cow position: | chr28:32358988-32359310 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 82-338 |
| Cow position: | chr28:9714992-9714731 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 128 |
| Conread position: | 5-384 |
| Cow position: | chr29:10822465-10822091 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 118, 29 |
| Conread position: | 7-343 |
| Cow position: | chr29:21431404-21431057 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 35, 251 |
| Conread position: | 7-384 |
| Cow position: | chr29:43324967-43325344 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 235 |
| Conread position: | 10-339 |
| Cow position: | chr29:4517064-4517393 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 125, 29 |
| Conread position: | 81-343 |
| Cow position: | chr29:31547160-31546890 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 174 |
| Conread position: | 153-343 |
| Cow position: | chr29:12794079-12794275 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 4-343 |
| Cow position: | chr3:72671172-72670842 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 5-343 |
| Cow position: | chr3:54291212-54290869 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 65 |
| Conread position: | 7-343 |
| Cow position: | chr3:6783731-6784079 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 252 |
| Conread position: | 31-343 |
| Cow position: | chr3:19945635-19945960 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 229 |
| Conread position: | 71-384 |
| Cow position: | chr3:79431335-79431027 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 24, 83 |
| Conread position: | 84-343 |
| Cow position: | chr3:63946589-63946840 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 119-361 |
| Cow position: | chr3:52661296-52661548 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 91, 114 |
| Conread position: | 9-344 |
| Cow position: | chr4:18102485-18102137 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 340 |
| Conread position: | 22-344 |
| Cow position: | chr4:19094157-19094491 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 155 |
| Conread position: | 30-343 |
| Cow position: | chr4:34221933-34222264 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 81-343 |
| Cow position: | chr4:65916511-65916770 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 157 |
| Conread position: | 83-344 |
| Cow position: | chr4:44107162-44106887 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 97-262 |
| Cow position: | chr4:4178642-4178810 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 142 |
| Conread position: | 119-343 |
| Cow position: | chr4:44899561-44899789 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 73, 125 |
| Conread position: | 153-343 |
| Cow position: | chr4:19252888-19253079 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 39, 103 |
| Conread position: | 3-384 |
| Cow position: | chr5:58151540-58151152 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 89 |
| Conread position: | 4-343 |
| Cow position: | chr5:7142791-7142454 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 31-300 |
| Cow position: | chr5:23230281-23230551 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 36-347 |
| Cow position: | chr5:43988407-43988721 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 92-343 |
| Cow position: | chr5:11115414-11115158 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 9-343 |
| Cow position: | chr6:39910746-39911086 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 127 |
| Conread position: | 35-384 |
| Cow position: | chr6:69144004-69144355 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 68-384 |
| Cow position: | chr6:64717793-64718108 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 110-347 |
| Cow position: | chr6:7193657-7193406 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 5-343 |
| Cow position: | chr7:30117986-30117644 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 6-384 |
| Cow position: | chr7:47974796-47974418 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 9-384 |
| Cow position: | chr7:31095762-31095384 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 108 |
| Conread position: | 30-343 |
| Cow position: | chr7:19045927-19045603 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 30-384 |
| Cow position: | chr7:68896182-68896531 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 181, 24 |
| Conread position: | 31-343 |
| Cow position: | chr7:60728929-60728610 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 36-343 |
| Cow position: | chr7:63949547-63949222 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 21 |
| Conread position: | 68-339 |
| Cow position: | chr7:67814051-67814317 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 92-384 |
| Cow position: | chr7:51920757-51921047 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 6, 19 |
| Conread position: | 1-384 |
| Cow position: | chr8:18054411-18054794 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 33 |
| Conread position: | 4-291 |
| Cow position: | chr8:42154590-42154297 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 32-343 |
| Cow position: | chr8:18210744-18210423 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 133 |
| Conread position: | 35-343 |
| Cow position: | chr8:16090557-16090866 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 4-339 |
| Cow position: | chr9:4308024-4307688 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 55, 88 |
| Conread position: | 9-339 |
| Cow position: | chr9:20176369-20176031 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 102-343 |
| Cow position: | chr9:29044328-29044080 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 17, 153 |
| Conread position: | 3-343 |
| Cow position: | chrX:14596090-14596438 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 5-384 |
| Cow position: | chrX:4752379-4751987 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 6-343 |
| Cow position: | chrX:16037195-16036854 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 85 |
| Conread position: | 6-343 |
| Cow position: | chrX:41887746-41887394 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 84 |
| Conread position: | 7-343 |
| Cow position: | chrX:18220668-18221012 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 35, 229 |
| Conread position: | 9-343 |
| Cow position: | chrX:14460760-14461099 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 114, 81 |
| Conread position: | 57-343 |
| Cow position: | chrX:33535864-33536162 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 8, 46 |
| Conread position: | 78-362 |
| Cow position: | chrX:24808242-24807950 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 136-343 |
| Cow position: | chrX:47395878-47395656 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 27, 57 |