Cow genome map
| Conread name: | Pla1-C0000029_L22 |
| Conread position: | 191-335 |
| Cow position: | chr1:34397237-34397098 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 192-332 |
| Cow position: | chr1:55146103-55146252 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 192-333 |
| Cow position: | chr1:99792352-99792497 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 15 |
| Conread position: | 194-331 |
| Cow position: | chr1:79165773-79165632 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 194-333 |
| Cow position: | chr1:56619121-56618987 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 52 |
| Conread position: | 177-330 |
| Cow position: | chr10:55047002-55047163 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 69, 29 |
| Conread position: | 192-333 |
| Cow position: | chr10:52278256-52278399 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 192-333 |
| Cow position: | chr10:58066603-58066455 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 14 |
| Conread position: | 194-331 |
| Cow position: | chr10:34300018-34300158 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 205-333 |
| Cow position: | chr10:1488403-1488525 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 192-333 |
| Cow position: | chr11:15286080-15285934 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 82, 14 |
| Conread position: | 192-333 |
| Cow position: | chr11:35881441-35881590 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 14 |
| Conread position: | 194-333 |
| Cow position: | chr11:27248034-27248176 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 206-333 |
| Cow position: | chr11:48428639-48428766 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 194-333 |
| Cow position: | chr12:8718598-8718455 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 49 |
| Conread position: | 195-332 |
| Cow position: | chr12:40806916-40807059 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 165-333 |
| Cow position: | chr13:11821770-11821599 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 114, 11 |
| Conread position: | 191-333 |
| Cow position: | chr13:53856983-53856842 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 192-331 |
| Cow position: | chr13:971467-971611 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 82, 14 |
| Conread position: | 204-333 |
| Cow position: | chr13:40943661-40943526 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 204-335 |
| Cow position: | chr13:61170307-61170443 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 192-333 |
| Cow position: | chr15:38395149-38395009 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 194-333 |
| Cow position: | chr15:5692243-5692098 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 204-333 |
| Cow position: | chr15:36724612-36724740 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 204-332 |
| Cow position: | chr16:39474570-39474437 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 206-332 |
| Cow position: | chr16:41895929-41896052 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 70, 43 |
| Conread position: | 194-333 |
| Cow position: | chr17:44233485-44233341 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 91, 129 |
| Conread position: | 194-333 |
| Cow position: | chr18:7649517-7649662 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 192-332 |
| Cow position: | chr19:9582851-9582996 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 14 |
| Conread position: | 193-332 |
| Cow position: | chr19:42762640-42762776 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 89, 13 |
| Conread position: | 194-333 |
| Cow position: | chr19:39697619-39697764 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 194-332 |
| Cow position: | chr2:15568752-15568608 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 194-334 |
| Cow position: | chr2:43596610-43596466 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 220-333 |
| Cow position: | chr2:70746365-70746481 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 95 |
| Conread position: | 191-334 |
| Cow position: | chr21:32297883-32297735 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 15 |
| Conread position: | 192-333 |
| Cow position: | chr22:3270058-3269922 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 90, 15 |
| Conread position: | 192-333 |
| Cow position: | chr23:221633-221774 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 194-333 |
| Cow position: | chr23:26986722-26986576 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 192-333 |
| Cow position: | chr24:15372651-15372801 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 14 |
| Conread position: | 193-333 |
| Cow position: | chr25:15024726-15024867 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 13 |
| Conread position: | 192-333 |
| Cow position: | chr26:13774076-13774218 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 14 |
| Conread position: | 195-333 |
| Cow position: | chr26:19698372-19698228 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 192-333 |
| Cow position: | chr28:6090722-6090869 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 193-333 |
| Cow position: | chr28:4139115-4138970 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 14 |
| Conread position: | 194-333 |
| Cow position: | chr28:10589463-10589321 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 195-332 |
| Cow position: | chr28:25806160-25806304 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 26-333 |
| Cow position: | chr29:26415396-26415715 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 119 |
| Conread position: | 192-333 |
| Cow position: | chr29:45006061-45005915 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 15 |
| Conread position: | 194-333 |
| Cow position: | chr29:18012155-18012300 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 194-332 |
| Cow position: | chr3:17709874-17710018 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 80, 128 |
| Conread position: | 194-333 |
| Cow position: | chr3:17937316-17937172 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 33 |
| Conread position: | 205-332 |
| Cow position: | chr3:41947565-41947436 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 177-332 |
| Cow position: | chr4:23526223-23526385 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 191-332 |
| Cow position: | chr4:3893275-3893424 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 15 |
| Conread position: | 192-333 |
| Cow position: | chr4:67408041-67408188 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 194-332 |
| Cow position: | chr4:19096847-19096989 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 192-333 |
| Cow position: | chr5:24643230-24643087 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 14 |
| Conread position: | 192-334 |
| Cow position: | chr5:64759147-64759007 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 194-333 |
| Cow position: | chr5:39815687-39815556 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 195-333 |
| Cow position: | chr5:29903938-29903794 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 194-333 |
| Cow position: | chr6:58439590-58439723 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 207-333 |
| Cow position: | chr6:7009353-7009479 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 131-288 |
| Cow position: | chr7:15607925-15608082 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 183-333 |
| Cow position: | chr7:26632222-26632067 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 193-332 |
| Cow position: | chr7:47697342-47697484 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 204-333 |
| Cow position: | chr7:39325370-39325490 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 191-333 |
| Cow position: | chr8:57042554-57042407 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 83, 12 |
| Conread position: | 195-334 |
| Cow position: | chr8:35581081-35580945 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 206-333 |
| Cow position: | chr8:20836705-20836840 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 194-333 |
| Cow position: | chr9:44914642-44914785 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 60, 92 |
| Conread position: | 165-333 |
| Cow position: | chrX:13785821-13785649 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 115, 35 |