Cow genome map

Conread name: Pla1-C0000030_A15

Conread position: 43-148
Cow position: chr1:92196397-92196502 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 43-156
Cow position: chr1:56746305-56746417 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 43-157
Cow position: chr1:72114561-72114675 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 128-463
Cow position: chr1:21300197-21300528 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 137-461
Cow position: chr1:13404936-13404608 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 159

Conread position: 139-463
Cow position: chr1:91902472-91902798 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 68

Conread position: 139-464
Cow position: chr1:88328029-88327704 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 141-463
Cow position: chr1:3969827-3969507 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 12

Conread position: 141-464
Cow position: chr1:22616451-22616131 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 142-464
Cow position: chr1:22629431-22629112 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 154

Conread position: 143-464
Cow position: chr1:62507785-62507465 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 143-464
Cow position: chr1:90393296-90392979 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 144-373
Cow position: chr1:73434043-73433809 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 144-463
Cow position: chr1:1383412-1383094 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 153-433
Cow position: chr1:86705607-86705884 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 48

Conread position: 153-457
Cow position: chr1:44837048-44836743 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 139

Conread position: 155-464
Cow position: chr1:80902004-80901715 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 161-270
Cow position: chr1:82163318-82163210 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 161-322
Cow position: chr1:62927948-62928107 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 161-337
Cow position: chr1:4563807-4563633 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 42, 0

Conread position: 161-344
Cow position: chr1:32961020-32960839 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 150
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 42, 0

Conread position: 161-344
Cow position: chr1:57946409-57946592 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 47, 71

Conread position: 161-356
Cow position: chr1:4208020-4207827 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-363
Cow position: chr1:21132377-21132185 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 161-363
Cow position: chr1:63044679-63044482 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 161-373
Cow position: chr1:53371848-53372053 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 168
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 0

Conread position: 161-401
Cow position: chr1:31352154-31351922 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-408
Cow position: chr1:4375320-4375080 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 161-420
Cow position: chr1:81320849-81320591 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-427
Cow position: chr1:98535096-98535357 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 42

Conread position: 161-446
Cow position: chr1:38545242-38544955 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 104

Conread position: 161-448
Cow position: chr1:61746703-61746417 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 161-452
Cow position: chr1:85151981-85152268 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 111

Conread position: 161-460
Cow position: chr1:10034006-10034301 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-460
Cow position: chr1:17938275-17937977 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-460
Cow position: chr1:70864725-70865019 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 46

Conread position: 161-461
Cow position: chr1:42054097-42053807 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 40

Conread position: 161-461
Cow position: chr1:97205833-97206132 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-462
Cow position: chr1:3440441-3440740 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-462
Cow position: chr1:58172371-58172667 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:7162329-7162040 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:7415964-7416257 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:8745018-8744718 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:18962269-18961970 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 42

Conread position: 161-463
Cow position: chr1:19236018-19235718 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:26585700-26586000 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:33040297-33040597 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:34533720-34534020 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:35598332-35598032 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr1:43225510-43225210 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:46612818-46612518 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:47923383-47923089 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:61281489-61281789 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:61331484-61331184 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:63046364-63046660 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:67831657-67831355 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr1:69770297-69770594 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:76873357-76873656 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:76878510-76878809 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:77748222-77748521 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:82479462-82479762 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:82909356-82909048 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-463
Cow position: chr1:84447161-84447460 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:84449104-84449404 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:84894041-84894341 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 161-463
Cow position: chr1:89431882-89432182 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:89492758-89492462 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:91105517-91105817 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:95456830-95457130 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr1:98988948-98988648 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr1:15743299-15743597 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr1:23371081-23370784 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 161-464
Cow position: chr1:44991494-44991193 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 29

Conread position: 161-464
Cow position: chr1:53368656-53368965 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 40

Conread position: 161-464
Cow position: chr1:55158904-55158602 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 161-464
Cow position: chr1:55327758-55327464 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 38

Conread position: 161-464
Cow position: chr1:82091373-82091674 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 42

Conread position: 161-464
Cow position: chr1:94464589-94464891 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 40

Conread position: 161-464
Cow position: chr1:95474423-95474130 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 163-388
Cow position: chr1:71666991-71666770 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 178-464
Cow position: chr1:81859979-81859695 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 91

Conread position: 188-461
Cow position: chr1:89742758-89742495 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 104

Conread position: 193-464
Cow position: chr1:24440551-24440281 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 10

Conread position: 41-146
Cow position: chr10:31005872-31005767 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 42-148
Cow position: chr10:34661078-34660971 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 43-148
Cow position: chr10:33664961-33665065 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 43-160
Cow position: chr10:63954941-63955057 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 43-163
Cow position: chr10:28775281-28775404 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 43-245
Cow position: chr10:31533888-31534092 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 115, 98

Conread position: 134-320
Cow position: chr10:50016908-50016731 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 19

Conread position: 140-464
Cow position: chr10:24296990-24296671 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 141-464
Cow position: chr10:4710810-4711122 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 141-464
Cow position: chr10:26732486-26732159 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 143-374
Cow position: chr10:42214360-42214589 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 75

Conread position: 143-445
Cow position: chr10:30456690-30456389 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 153

Conread position: 143-463
Cow position: chr10:15888461-15888779 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 10

Conread position: 143-463
Cow position: chr10:55096545-55096860 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 143-464
Cow position: chr10:37908665-37908343 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 143-464
Cow position: chr10:48384748-48384431 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 147-461
Cow position: chr10:51836990-51836675 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 147-464
Cow position: chr10:17836704-17836395 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 161-301
Cow position: chr10:39811007-39810869 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 161-316
Cow position: chr10:17223021-17223174 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 161-319
Cow position: chr10:48373944-48373786 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 131

Conread position: 161-336
Cow position: chr10:11216465-11216296 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 161-394
Cow position: chr10:60936151-60936381 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 63, 42

Conread position: 161-397
Cow position: chr10:54928437-54928203 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 60, 42

Conread position: 161-443
Cow position: chr10:10023469-10023742 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr10:7894945-7894644 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr10:10173406-10173689 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr10:21729199-21728897 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 131

Conread position: 161-463
Cow position: chr10:26291984-26291683 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr10:30720199-30720499 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr10:32365443-32365743 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 161-463
Cow position: chr10:33933820-33933519 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 42

Conread position: 161-463
Cow position: chr10:37125713-37125415 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr10:38397253-38396947 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 49

Conread position: 161-463
Cow position: chr10:39211276-39211577 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 42

Conread position: 161-463
Cow position: chr10:39648467-39648167 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr10:47084530-47084831 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 39

Conread position: 161-463
Cow position: chr10:50087216-50086915 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-463
Cow position: chr10:52826125-52825825 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr10:9799014-9798713 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 50

Conread position: 161-464
Cow position: chr10:14964064-14963760 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 42

Conread position: 161-464
Cow position: chr10:16646808-16646501 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 135

Conread position: 161-464
Cow position: chr10:31527201-31527497 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 42

Conread position: 161-464
Cow position: chr10:38013545-38013849 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 129

Conread position: 161-464
Cow position: chr10:38273621-38273926 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 42

Conread position: 161-464
Cow position: chr10:39139166-39139465 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 36

Conread position: 161-464
Cow position: chr10:39940142-39939842 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 102

Conread position: 161-464
Cow position: chr10:42745091-42745391 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 19

Conread position: 161-464
Cow position: chr10:43288877-43288582 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-464
Cow position: chr10:43489131-43489432 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr10:44203196-44202908 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 181, 74

Conread position: 161-464
Cow position: chr10:44785792-44786093 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr10:50110703-50110410 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 42

Conread position: 161-464
Cow position: chr10:54798941-54799243 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 42

Conread position: 163-463
Cow position: chr10:11682357-11682058 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 40

Conread position: 139-463
Cow position: chr11:63652526-63652207 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 141-463
Cow position: chr11:62009683-62009359 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 66

Conread position: 141-464
Cow position: chr11:30164692-30164993 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 12

Conread position: 143-279
Cow position: chr11:3496166-3496302 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 61

Conread position: 143-463
Cow position: chr11:2293937-2293618 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 143-464
Cow position: chr11:25564875-25565190 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 144-446
Cow position: chr11:8246307-8246609 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 148

Conread position: 144-464
Cow position: chr11:30255562-30255878 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 146-464
Cow position: chr11:9432499-9432817 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 59

Conread position: 147-464
Cow position: chr11:70602155-70601841 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 150-408
Cow position: chr11:24045626-24045374 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 154-463
Cow position: chr11:75402387-75402087 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 156-461
Cow position: chr11:23773396-23773694 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 157-463
Cow position: chr11:29614487-29614788 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 47

Conread position: 160-463
Cow position: chr11:2350660-2350960 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 161-311
Cow position: chr11:26067968-26067813 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 137

Conread position: 161-318
Cow position: chr11:32068114-32067958 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 64, 40

Conread position: 161-338
Cow position: chr11:62881493-62881322 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 161-349
Cow position: chr11:84723318-84723505 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 50, 71

Conread position: 161-358
Cow position: chr11:57625048-57624850 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 42

Conread position: 161-387
Cow position: chr11:35241737-35241517 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 161-407
Cow position: chr11:47757846-47757595 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 133

Conread position: 161-408
Cow position: chr11:18116496-18116741 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 42

Conread position: 161-418
Cow position: chr11:67453795-67454050 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-424
Cow position: chr11:2285855-2286116 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-445
Cow position: chr11:41178093-41178375 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 130

Conread position: 161-461
Cow position: chr11:2421609-2421907 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-461
Cow position: chr11:10851255-10851554 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 161-461
Cow position: chr11:50282268-50281966 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 42

Conread position: 161-462
Cow position: chr11:10100190-10100489 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:1268363-1268063 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:2772480-2772778 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:4734425-4734725 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:8366702-8367002 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:10043386-10043686 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:10698604-10698307 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:15047601-15047899 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:17104564-17104264 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:22617804-22617504 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:26592635-26592336 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:34638362-34638062 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:35142190-35141894 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr11:40139429-40139133 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 42

Conread position: 161-463
Cow position: chr11:41314437-41314737 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:47972710-47972426 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:52846617-52846917 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:58136859-58137153 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:72050120-72050422 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 42

Conread position: 161-463
Cow position: chr11:83001171-83001470 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr11:84967250-84967550 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr11:13087525-13087224 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr11:21853109-21852801 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 135

Conread position: 161-464
Cow position: chr11:27906472-27906764 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 42

Conread position: 161-464
Cow position: chr11:31236261-31235962 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 50

Conread position: 161-464
Cow position: chr11:31865778-31866093 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 42

Conread position: 161-464
Cow position: chr11:36930392-36930092 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 42

Conread position: 161-464
Cow position: chr11:40300625-40300327 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr11:62792036-62792334 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr11:71078565-71078865 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 131

Conread position: 161-464
Cow position: chr11:81576540-81576244 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 162-320
Cow position: chr11:8499209-8499361 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 163-464
Cow position: chr11:17279463-17279154 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 90

Conread position: 164-461
Cow position: chr11:38235625-38235340 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 168-336
Cow position: chr11:42017732-42017569 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 95

Conread position: 40-464
Cow position: chr12:1345442-1345847 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 111

Conread position: 42-215
Cow position: chr12:33296996-33297165 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 131, 108

Conread position: 139-463
Cow position: chr12:10359100-10359419 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 143-427
Cow position: chr12:42604777-42604495 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 143-457
Cow position: chr12:21212189-21212502 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 143-464
Cow position: chr12:8172312-8172631 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 10

Conread position: 160-320
Cow position: chr12:26869832-26869670 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 134

Conread position: 161-282
Cow position: chr12:35547710-35547590 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 161-301
Cow position: chr12:36149248-36149110 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 161-339
Cow position: chr12:24756123-24755944 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 147
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 132

Conread position: 161-406
Cow position: chr12:1093325-1093568 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 64

Conread position: 161-418
Cow position: chr12:15939453-15939201 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 161-444
Cow position: chr12:38774514-38774783 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 264, 61

Conread position: 161-460
Cow position: chr12:15821146-15821439 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-461
Cow position: chr12:3070283-3070582 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 132

Conread position: 161-461
Cow position: chr12:31868843-31869136 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 50

Conread position: 161-463
Cow position: chr12:465185-464885 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:1056083-1055784 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 161-463
Cow position: chr12:3545077-3545377 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:5110639-5110345 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:8542450-8542154 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 161-463
Cow position: chr12:8839679-8839979 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:10076083-10076383 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:13042816-13042515 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-463
Cow position: chr12:14940390-14940690 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:15720141-15719845 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:15925328-15925028 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:21579361-21579062 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 42

Conread position: 161-463
Cow position: chr12:21665561-21665863 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-463
Cow position: chr12:22517429-22517124 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 134

Conread position: 161-463
Cow position: chr12:25265908-25265611 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:28012806-28012506 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:32147204-32146905 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:34176980-34177280 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:38893789-38894088 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr12:43533512-43533812 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr12:6186724-6186427 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 161-464
Cow position: chr12:7651409-7651114 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 161-464
Cow position: chr12:21946414-21946707 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 39

Conread position: 161-464
Cow position: chr12:22594179-22594473 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 161-464
Cow position: chr12:37698048-37697751 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 162-463
Cow position: chr12:4965411-4965112 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 162-464
Cow position: chr12:5226660-5226955 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 39

Conread position: 163-464
Cow position: chr12:30011539-30011245 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 163-464
Cow position: chr12:30016646-30016352 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 166-464
Cow position: chr12:9886579-9886281 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 37

Conread position: 42-160
Cow position: chr13:21905754-21905637 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 42-163
Cow position: chr13:44323807-44323687 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 140-464
Cow position: chr13:60489490-60489811 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 143-464
Cow position: chr13:13126530-13126212 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 144-461
Cow position: chr13:12390179-12389863 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 153-462
Cow position: chr13:19565500-19565192 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 155-320
Cow position: chr13:49195160-49195322 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 9

Conread position: 160-320
Cow position: chr13:31510362-31510515 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 161-271
Cow position: chr13:6718947-6718838 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 161-334
Cow position: chr13:60465797-60465626 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 144
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 42, 0

Conread position: 161-356
Cow position: chr13:28700037-28700228 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 158
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 161-364
Cow position: chr13:16248724-16248528 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 161-401
Cow position: chr13:46056159-46056397 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-451
Cow position: chr13:21837080-21836792 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:2725590-2725290 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:5498584-5498288 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-463
Cow position: chr13:6343099-6343399 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:6869524-6869820 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:7402621-7402922 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr13:7870345-7870048 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:8173181-8172882 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:12991391-12991088 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-463
Cow position: chr13:18121654-18121357 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:32081093-32081393 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:35540618-35540918 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:40300530-40300230 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:50112683-50112983 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr13:55337954-55338252 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr13:58313549-58313849 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr13:561172-560870 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 119

Conread position: 161-464
Cow position: chr13:16807806-16808100 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr13:20571498-20571199 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 113

Conread position: 161-464
Cow position: chr13:26073697-26073405 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr13:34728070-34728373 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 127

Conread position: 161-464
Cow position: chr13:43594047-43594348 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 42

Conread position: 161-464
Cow position: chr13:60646369-60646067 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-464
Cow position: chr13:60967561-60967268 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 39

Conread position: 162-463
Cow position: chr13:36672885-36673185 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 41

Conread position: 162-463
Cow position: chr13:39911616-39911913 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 163-464
Cow position: chr13:34905366-34905076 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 166-340
Cow position: chr13:12572222-12572050 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 176-445
Cow position: chr13:38013429-38013167 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 189-446
Cow position: chr13:41337439-41337184 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 35-186
Cow position: chr14:424201-424351 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 138, 0

Conread position: 40-163
Cow position: chr14:28117082-28117206 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 43-148
Cow position: chr14:50122054-50122159 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 43-156
Cow position: chr14:1802225-1802337 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 43-165
Cow position: chr14:23215229-23215350 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 137-464
Cow position: chr14:17690179-17690513 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 70

Conread position: 143-464
Cow position: chr14:29773074-29772747 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 132

Conread position: 143-464
Cow position: chr14:40189842-40189519 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 151

Conread position: 144-343
Cow position: chr14:13276147-13276340 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 60

Conread position: 147-464
Cow position: chr14:27844401-27844716 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 153-459
Cow position: chr14:46178423-46178727 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 153-463
Cow position: chr14:19550558-19550870 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 141

Conread position: 161-270
Cow position: chr14:24973538-24973430 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 161-308
Cow position: chr14:44554927-44555072 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 43

Conread position: 161-320
Cow position: chr14:12066361-12066200 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 109, 42

Conread position: 161-320
Cow position: chr14:38295391-38295549 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 130, 0

Conread position: 161-322
Cow position: chr14:47873037-47872878 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 161-336
Cow position: chr14:9108670-9108494 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 60, 42

Conread position: 161-376
Cow position: chr14:11508730-11508517 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-409
Cow position: chr14:32500248-32500494 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-432
Cow position: chr14:40475639-40475367 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 161-454
Cow position: chr14:28350611-28350330 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-461
Cow position: chr14:30581378-30581080 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr14:5645495-5645795 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr14:8396693-8396393 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr14:13236732-13236433 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr14:13370312-13370609 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr14:14443355-14443055 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr14:15904297-15904594 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr14:17488252-17487951 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr14:21314348-21314048 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr14:23254257-23253956 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr14:24895758-24896057 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr14:26129093-26128793 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr14:29711591-29711891 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr14:34168385-34168685 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr14:40969242-40969532 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr14:9744560-9744260 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr14:13581956-13582243 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 50

Conread position: 161-464
Cow position: chr14:21390295-21390001 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr14:23215287-23215590 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 42

Conread position: 161-464
Cow position: chr14:39433444-39433749 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 134

Conread position: 161-464
Cow position: chr14:40229804-40230108 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 133

Conread position: 161-464
Cow position: chr14:40346346-40346647 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-464
Cow position: chr14:45790095-45790396 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 42

Conread position: 163-313
Cow position: chr14:38459066-38458922 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 32-148
Cow position: chr15:8046538-8046654 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 42-160
Cow position: chr15:47201543-47201426 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 141-407
Cow position: chr15:13641157-13641423 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 151

Conread position: 141-464
Cow position: chr15:13076590-13076916 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 141-464
Cow position: chr15:18214633-18214960 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 156

Conread position: 143-320
Cow position: chr15:29007274-29007099 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 9

Conread position: 143-463
Cow position: chr15:25165032-25164713 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 143-463
Cow position: chr15:36940311-36939992 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 143-464
Cow position: chr15:60689-61014 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 144-320
Cow position: chr15:6488840-6489015 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 88

Conread position: 144-463
Cow position: chr15:12442598-12442917 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 148-464
Cow position: chr15:17193481-17193166 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 55

Conread position: 153-400
Cow position: chr15:4953403-4953647 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 10, 49

Conread position: 153-463
Cow position: chr15:25203890-25203581 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 160-461
Cow position: chr15:45292408-45292705 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 43

Conread position: 160-462
Cow position: chr15:2644258-2643958 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 160-464
Cow position: chr15:8576239-8576544 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 43

Conread position: 161-282
Cow position: chr15:20647255-20647375 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 161-298
Cow position: chr15:33335555-33335690 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 161-299
Cow position: chr15:3276387-3276251 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 161-310
Cow position: chr15:3272808-3272662 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 161-318
Cow position: chr15:6367399-6367244 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 42

Conread position: 161-336
Cow position: chr15:4629155-4628976 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 42, 134

Conread position: 161-366
Cow position: chr15:8001473-8001273 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 64, 42

Conread position: 161-374
Cow position: chr15:39407183-39406966 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 135

Conread position: 161-418
Cow position: chr15:4918197-4918455 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 71

Conread position: 161-436
Cow position: chr15:42940001-42940272 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 161-437
Cow position: chr15:4689124-4689394 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 50

Conread position: 161-460
Cow position: chr15:43247895-43248177 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 68, 49

Conread position: 161-461
Cow position: chr15:6158275-6158569 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr15:29217-28918 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr15:442698-442399 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr15:481670-481954 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr15:5020453-5020751 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr15:6563983-6564293 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 42

Conread position: 161-463
Cow position: chr15:9620310-9620009 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-463
Cow position: chr15:11596291-11595991 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr15:20404592-20404292 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr15:25133053-25133353 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr15:31768459-31768160 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr15:49191475-49191175 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr15:50151790-50152091 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 42

Conread position: 161-463
Cow position: chr15:52208406-52208106 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr15:609026-608738 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 39

Conread position: 161-464
Cow position: chr15:21533046-21532747 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 161-464
Cow position: chr15:26388878-26388578 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr15:37382498-37382200 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 131

Conread position: 161-464
Cow position: chr15:42727465-42727763 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr15:47201484-47201170 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 42

Conread position: 161-464
Cow position: chr15:50344644-50344344 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 129

Conread position: 162-463
Cow position: chr15:5640499-5640200 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 189-463
Cow position: chr15:4082102-4082375 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 189-463
Cow position: chr15:6959814-6960087 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 189-463
Cow position: chr15:21909290-21909019 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 92

Conread position: 190-463
Cow position: chr15:28487024-28486752 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 35-160
Cow position: chr16:39457062-39457188 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 97, 117

Conread position: 37-216
Cow position: chr16:49219274-49219095 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 43-148
Cow position: chr16:15369676-15369781 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 43-157
Cow position: chr16:15187749-15187863 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 43-166
Cow position: chr16:24147337-24147461 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 104, 117

Conread position: 141-320
Cow position: chr16:25935465-25935643 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 63

Conread position: 142-365
Cow position: chr16:23403535-23403758 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 63

Conread position: 143-464
Cow position: chr16:41259-41582 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 10

Conread position: 144-321
Cow position: chr16:2408167-2407991 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 88, 59

Conread position: 147-464
Cow position: chr16:4712101-4712413 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 153-463
Cow position: chr16:5345965-5345656 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 153-464
Cow position: chr16:50190384-50190078 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 154-463
Cow position: chr16:15349426-15349123 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 161-320
Cow position: chr16:7541225-7541380 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 161-320
Cow position: chr16:51400818-51400658 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 74

Conread position: 161-339
Cow position: chr16:42074155-42073975 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 125

Conread position: 161-373
Cow position: chr16:49742788-49742576 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 133

Conread position: 161-399
Cow position: chr16:23563191-23563412 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 40, 0

Conread position: 161-406
Cow position: chr16:24228984-24229222 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-453
Cow position: chr16:702002-702282 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 42

Conread position: 161-461
Cow position: chr16:193195-192898 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-461
Cow position: chr16:1563645-1563346 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 161-461
Cow position: chr16:20234884-20234589 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 46

Conread position: 161-463
Cow position: chr16:5525356-5525058 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr16:6677464-6677760 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr16:7385508-7385808 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr16:13721846-13721545 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr16:15904477-15904178 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 161-463
Cow position: chr16:16566840-16567140 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr16:18212452-18212152 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr16:19778194-19777894 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 42

Conread position: 161-463
Cow position: chr16:22798961-22798670 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr16:23877217-23877517 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr16:24407655-24407955 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr16:27593081-27592781 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr16:45465178-45464877 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-464
Cow position: chr16:7701511-7701819 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 137

Conread position: 161-464
Cow position: chr16:10866500-10866800 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr16:13422181-13421882 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 161-464
Cow position: chr16:17664860-17665165 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 40

Conread position: 161-464
Cow position: chr16:18745297-18744993 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 106

Conread position: 161-464
Cow position: chr16:20968144-20967841 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 42

Conread position: 161-464
Cow position: chr16:26666447-26666754 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 42

Conread position: 161-464
Cow position: chr16:50712696-50712395 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 34

Conread position: 161-464
Cow position: chr16:56149526-56149822 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 53

Conread position: 162-269
Cow position: chr16:37388058-37387952 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 163-464
Cow position: chr16:6389911-6389605 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 40

Conread position: 120-427
Cow position: chr17:45881113-45881416 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 36

Conread position: 135-279
Cow position: chr17:21770953-21771100 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 72

Conread position: 139-464
Cow position: chr17:21767171-21767495 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 134

Conread position: 141-464
Cow position: chr17:16447199-16446879 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 13

Conread position: 142-461
Cow position: chr17:15374674-15374971 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 142-464
Cow position: chr17:18885090-18884772 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 144-464
Cow position: chr17:148191-148512 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 149

Conread position: 153-463
Cow position: chr17:15809281-15809591 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 48

Conread position: 161-301
Cow position: chr17:3780953-3781091 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 161-336
Cow position: chr17:37528669-37528496 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 161-367
Cow position: chr17:4920737-4920949 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 37, 136

Conread position: 161-374
Cow position: chr17:24785493-24785704 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-461
Cow position: chr17:19998397-19998692 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 161-463
Cow position: chr17:184450-184749 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr17:2265491-2265791 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr17:8212359-8212657 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr17:8994037-8993738 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr17:15439094-15439393 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr17:17957900-17958199 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr17:19215108-19214807 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 42

Conread position: 161-463
Cow position: chr17:21181790-21182090 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr17:26829441-26829143 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr17:34235948-34235648 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr17:16118162-16117877 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 161-464
Cow position: chr17:18201024-18201328 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 134

Conread position: 161-464
Cow position: chr17:29075072-29074788 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 161-464
Cow position: chr17:36265970-36265676 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 5

Conread position: 176-421
Cow position: chr17:5672202-5671959 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 176-463
Cow position: chr17:5638574-5638289 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 35-163
Cow position: chr18:12241277-12241404 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 137-461
Cow position: chr18:17944011-17944340 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 67

Conread position: 137-463
Cow position: chr18:16463148-16462829 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 141-461
Cow position: chr18:39002627-39002320 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 141-464
Cow position: chr18:1145045-1144733 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 143-463
Cow position: chr18:16640955-16641273 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 143-463
Cow position: chr18:51459338-51459019 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 149-463
Cow position: chr18:26568094-26568406 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 161-299
Cow position: chr18:23688698-23688834 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 161-319
Cow position: chr18:11870013-11870169 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 131
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 161-320
Cow position: chr18:10221164-10221007 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 161-403
Cow position: chr18:4949684-4949925 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 39

Conread position: 161-463
Cow position: chr18:3190270-3190570 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr18:10292257-10292554 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr18:18215487-18215196 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr18:24037320-24037025 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr18:29079263-29079563 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr18:37733215-37733515 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr18:42425099-42425398 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr18:42609150-42608850 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr18:51345814-51346114 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr18:52629732-52629432 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr18:19310678-19310975 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 161-464
Cow position: chr18:23659369-23659079 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 133

Conread position: 161-464
Cow position: chr18:23802549-23802847 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr18:27800355-27800054 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 42

Conread position: 162-462
Cow position: chr18:29071944-29072242 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 188-461
Cow position: chr18:52692689-52692953 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 32-156
Cow position: chr19:42725472-42725599 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 87-403
Cow position: chr19:32617781-32618090 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 40

Conread position: 133-464
Cow position: chr19:1581405-1581072 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 161

Conread position: 141-464
Cow position: chr19:32456821-32457143 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 143-463
Cow position: chr19:39923850-39924168 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 10

Conread position: 143-464
Cow position: chr19:40016079-40015760 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 153-461
Cow position: chr19:41856-42166 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 139

Conread position: 153-463
Cow position: chr19:22512767-22513073 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 161-304
Cow position: chr19:19389366-19389507 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 161-320
Cow position: chr19:38389889-38390045 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 112, 0

Conread position: 161-322
Cow position: chr19:31782102-31782261 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 133
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 161-335
Cow position: chr19:39697016-39697178 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 161-374
Cow position: chr19:35781408-35781620 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-419
Cow position: chr19:16316687-16316431 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr19:2065139-2065437 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 161-463
Cow position: chr19:3086324-3086621 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr19:27081883-27081578 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 161-463
Cow position: chr19:29367060-29367360 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr19:29624568-29624867 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr19:31762609-31762307 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 108

Conread position: 161-464
Cow position: chr19:158656-158361 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 161-464
Cow position: chr19:542092-541785 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 54

Conread position: 161-464
Cow position: chr19:12614318-12614014 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 0

Conread position: 161-464
Cow position: chr19:19501159-19500859 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 42

Conread position: 161-464
Cow position: chr19:29071508-29071222 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 161-464
Cow position: chr19:33932935-33932643 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 161-464
Cow position: chr19:39182008-39181702 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 135

Conread position: 162-461
Cow position: chr19:28596905-28597200 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 41

Conread position: 186-464
Cow position: chr19:48556242-48556534 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 189-320
Cow position: chr19:1583705-1583576 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 43-151
Cow position: chr2:42502445-42502553 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 43-156
Cow position: chr2:77281096-77281208 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 43-160
Cow position: chr2:7370585-7370700 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 43-163
Cow position: chr2:76984993-76984872 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 135-316
Cow position: chr2:76560538-76560721 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 18, 130

Conread position: 141-463
Cow position: chr2:10608841-10608520 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 63

Conread position: 143-463
Cow position: chr2:8529628-8529947 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 143-463
Cow position: chr2:63890283-63889970 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 61

Conread position: 143-463
Cow position: chr2:67682741-67683060 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 153-329
Cow position: chr2:7506617-7506447 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 51

Conread position: 153-374
Cow position: chr2:104777-104559 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 10, 49

Conread position: 153-464
Cow position: chr2:30380242-30380552 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 157-464
Cow position: chr2:45917798-45917491 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 46

Conread position: 160-464
Cow position: chr2:65930434-65930142 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 43

Conread position: 161-278
Cow position: chr2:31272725-31272609 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 161-320
Cow position: chr2:36722025-36722176 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 161-336
Cow position: chr2:59410780-59410607 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 161-353
Cow position: chr2:9219939-9219751 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 170, 109

Conread position: 161-362
Cow position: chr2:62735145-62735344 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-373
Cow position: chr2:576532-576736 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 161-374
Cow position: chr2:7905911-7906118 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 102

Conread position: 161-374
Cow position: chr2:50431672-50431462 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-378
Cow position: chr2:11002456-11002663 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 161-379
Cow position: chr2:5797829-5797612 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-388
Cow position: chr2:50565289-50565510 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 204, 42

Conread position: 161-406
Cow position: chr2:4804763-4804520 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 161-447
Cow position: chr2:2603637-2603922 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-454
Cow position: chr2:46265278-46265566 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 42

Conread position: 161-457
Cow position: chr2:18020937-18020643 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 161-457
Cow position: chr2:74469017-74468723 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-458
Cow position: chr2:9042684-9042389 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 50

Conread position: 161-458
Cow position: chr2:70915928-70916219 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-461
Cow position: chr2:48534016-48533718 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-462
Cow position: chr2:57938371-57938670 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:825977-825677 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:2212515-2212216 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 161-463
Cow position: chr2:4180141-4179842 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 42

Conread position: 161-463
Cow position: chr2:6945025-6945325 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:11813574-11813273 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr2:14938646-14938946 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:17119102-17118803 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:22344994-22345294 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:24423053-24422754 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:37396356-37396656 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 42

Conread position: 161-463
Cow position: chr2:44094341-44094640 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:48721710-48722010 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:53204151-53203849 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 43

Conread position: 161-463
Cow position: chr2:54148263-54148563 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:54740446-54740751 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 46

Conread position: 161-463
Cow position: chr2:55164330-55164031 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:60051493-60051193 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:62731500-62731800 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:62999795-62999495 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr2:77859296-77859594 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr2:86508461-86508160 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-464
Cow position: chr2:12330900-12331208 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 135, 208

Conread position: 161-464
Cow position: chr2:16717927-16717632 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 161-464
Cow position: chr2:16752921-16752623 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 161-464
Cow position: chr2:32417655-32417356 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 48

Conread position: 161-464
Cow position: chr2:35194684-35194983 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr2:37324860-37325160 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 42

Conread position: 161-464
Cow position: chr2:38335351-38335652 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr2:41157154-41157446 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 42

Conread position: 161-464
Cow position: chr2:68191377-68191094 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 55

Conread position: 161-464
Cow position: chr2:85739335-85739643 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 136

Conread position: 162-464
Cow position: chr2:39107228-39107527 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 163-464
Cow position: chr2:209128-208828 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 40

Conread position: 42-157
Cow position: chr20:17845152-17845266 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 42-163
Cow position: chr20:25856604-25856724 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 141-461
Cow position: chr20:6055256-6054929 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 143-320
Cow position: chr20:14094027-14094202 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 10

Conread position: 143-461
Cow position: chr20:14210901-14210596 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 10

Conread position: 143-463
Cow position: chr20:8970429-8970115 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 143-464
Cow position: chr20:29370945-29370623 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 149

Conread position: 145-464
Cow position: chr20:35159113-35158795 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 59

Conread position: 153-463
Cow position: chr20:39391656-39391347 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 161-335
Cow position: chr20:14925147-14924975 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 161-369
Cow position: chr20:16526792-16526999 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 144, 0

Conread position: 161-373
Cow position: chr20:10538130-10538340 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 130, 0

Conread position: 161-426
Cow position: chr20:31220765-31221029 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 42

Conread position: 161-433
Cow position: chr20:30146926-30147196 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-436
Cow position: chr20:28714735-28714460 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-452
Cow position: chr20:27339335-27339618 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 161-460
Cow position: chr20:34776390-34776679 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 161-461
Cow position: chr20:21398312-21398594 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 161-462
Cow position: chr20:19441414-19441711 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr20:753936-754236 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr20:826275-826580 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr20:6135496-6135196 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr20:13619293-13618999 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr20:16584496-16584793 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-463
Cow position: chr20:18651104-18651404 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr20:28100318-28100018 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr20:28323973-28324273 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr20:28443854-28443557 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr20:30384750-30384451 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr20:30479604-30479904 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr20:31784818-31784518 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr20:34458775-34458479 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr20:5958650-5958349 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr20:9536389-9536695 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 131

Conread position: 161-464
Cow position: chr20:12241630-12241319 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 184

Conread position: 161-464
Cow position: chr20:16515818-16516119 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 42

Conread position: 161-464
Cow position: chr20:16942145-16941851 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 42

Conread position: 161-464
Cow position: chr20:20353645-20353359 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 190, 40

Conread position: 161-464
Cow position: chr20:40781233-40781534 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 162-464
Cow position: chr20:11454107-11453805 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 130

Conread position: 165-464
Cow position: chr20:9339512-9339811 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 38

Conread position: 189-461
Cow position: chr20:33731267-33731548 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 12

Conread position: 190-391
Cow position: chr20:13501171-13501371 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 101, 0

Conread position: 45-153
Cow position: chr21:13678172-13678064 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 134-464
Cow position: chr21:10668749-10668437 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 68

Conread position: 146-463
Cow position: chr21:744114-743806 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 147-461
Cow position: chr21:470884-471196 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 6

Conread position: 147-464
Cow position: chr21:1463497-1463809 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 6

Conread position: 147-464
Cow position: chr21:22719510-22719198 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 153-463
Cow position: chr21:3923507-3923816 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 153-464
Cow position: chr21:18979573-18979279 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 142

Conread position: 161-299
Cow position: chr21:451241-451380 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 111, 42

Conread position: 161-322
Cow position: chr21:6965867-6965709 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 161-374
Cow position: chr21:28428653-28428864 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 63, 12

Conread position: 161-397
Cow position: chr21:9010502-9010266 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 59

Conread position: 161-431
Cow position: chr21:2419799-2420066 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 86

Conread position: 161-462
Cow position: chr21:6623418-6623723 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 161-463
Cow position: chr21:451482-451779 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 42

Conread position: 161-463
Cow position: chr21:4541582-4541282 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr21:7047577-7047280 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr21:11509546-11509842 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr21:23329738-23329438 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr21:30966338-30966038 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr21:34900069-34899780 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr21:39429225-39429524 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr21:39486669-39486369 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr21:45307-45621 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 135

Conread position: 161-464
Cow position: chr21:3766165-3765861 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 132

Conread position: 161-464
Cow position: chr21:4559469-4559167 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-464
Cow position: chr21:15546088-15545785 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 130

Conread position: 161-464
Cow position: chr21:16278006-16278303 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 86

Conread position: 161-464
Cow position: chr21:21216870-21216565 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 137

Conread position: 161-464
Cow position: chr21:26829958-26829661 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 136

Conread position: 161-464
Cow position: chr21:27864251-27863944 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 39

Conread position: 161-464
Cow position: chr21:28476898-28477201 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-464
Cow position: chr21:29214879-29214580 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 166-461
Cow position: chr21:25156894-25157185 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 37

Conread position: 171-464
Cow position: chr21:23605949-23606247 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 127

Conread position: 175-464
Cow position: chr21:28839589-28839877 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 118, 0

Conread position: 187-463
Cow position: chr21:19613874-19614149 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 16

Conread position: 190-464
Cow position: chr21:20107445-20107174 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 190-464
Cow position: chr21:26852553-26852826 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 21

Conread position: 193-464
Cow position: chr21:8071460-8071197 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 10

Conread position: 40-171
Cow position: chr22:13768648-13768779 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 43-147
Cow position: chr22:34901237-34901341 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 43-165
Cow position: chr22:12869083-12868964 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 43-245
Cow position: chr22:30963273-30963474 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 98

Conread position: 136-373
Cow position: chr22:25765306-25765071 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 89, 25

Conread position: 139-461
Cow position: chr22:45106717-45106404 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 141-463
Cow position: chr22:16203209-16203525 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 143-464
Cow position: chr22:13897050-13897365 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 144-464
Cow position: chr22:556913-556600 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 150-464
Cow position: chr22:34607899-34608199 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 153-284
Cow position: chr22:24817340-24817211 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 49

Conread position: 160-387
Cow position: chr22:15953577-15953353 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 43

Conread position: 160-399
Cow position: chr22:18188615-18188845 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 161-279
Cow position: chr22:28714331-28714448 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 161-319
Cow position: chr22:44382157-44382313 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 161-321
Cow position: chr22:5331351-5331189 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 48, 132

Conread position: 161-373
Cow position: chr22:34625549-34625753 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 119, 0

Conread position: 161-399
Cow position: chr22:34893981-34894214 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-445
Cow position: chr22:15858210-15858496 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 130

Conread position: 161-454
Cow position: chr22:322391-322109 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 161-460
Cow position: chr22:31645530-31645822 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 58

Conread position: 161-461
Cow position: chr22:6928661-6928957 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 161-461
Cow position: chr22:32894340-32894636 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 42

Conread position: 161-463
Cow position: chr22:981754-982054 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:3274925-3274627 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:7304070-7303763 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 42

Conread position: 161-463
Cow position: chr22:8299571-8299882 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-463
Cow position: chr22:14807686-14807986 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:19597531-19597236 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 42

Conread position: 161-463
Cow position: chr22:19712957-19712658 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:20237142-20236842 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:22107474-22107774 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:22563101-22563401 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:22607590-22607890 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 161-463
Cow position: chr22:27306532-27306232 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:28996877-28996577 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr22:29855281-29855579 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-464
Cow position: chr22:1310511-1310213 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 42

Conread position: 161-464
Cow position: chr22:1325642-1325938 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 131

Conread position: 161-464
Cow position: chr22:5041536-5041844 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 161-464
Cow position: chr22:8417684-8417982 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 161-464
Cow position: chr22:9277230-9277522 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 39

Conread position: 161-464
Cow position: chr22:22022099-22022395 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 161-464
Cow position: chr22:33093770-33094070 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 176-460
Cow position: chr22:12968813-12968531 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 27

Conread position: 188-464
Cow position: chr22:25912171-25912440 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 73

Conread position: 190-464
Cow position: chr22:645482-645222 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 193-463
Cow position: chr22:43949395-43949127 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 193-464
Cow position: chr22:37829855-37829585 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 10

Conread position: 40-157
Cow position: chr23:11128382-11128499 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 42-155
Cow position: chr23:33233956-33233843 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 141-464
Cow position: chr23:26230535-26230840 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 147-330
Cow position: chr23:5539724-5539546 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 6

Conread position: 147-460
Cow position: chr23:10013745-10014057 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 148-445
Cow position: chr23:14911020-14910724 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 56

Conread position: 161-279
Cow position: chr23:31771845-31771728 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 161-318
Cow position: chr23:3709824-3709979 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 161-320
Cow position: chr23:20541393-20541552 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 42

Conread position: 161-432
Cow position: chr23:3286184-3286451 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-450
Cow position: chr23:31704320-31704607 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 124
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 161-457
Cow position: chr23:14265768-14266059 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 161-461
Cow position: chr23:40825224-40825506 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 161-463
Cow position: chr23:954375-954075 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:1113377-1113677 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:2320525-2320225 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:2369216-2369506 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:3302280-3302580 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:8707816-8708116 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:9267437-9267138 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:10874237-10873937 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:10936871-10936572 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:11070505-11070789 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:11079810-11080110 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:14215809-14215509 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:15568987-15569287 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:29043209-29043509 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 161-463
Cow position: chr23:31605853-31606153 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr23:35285095-35284795 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr23:4516958-4517252 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 161-464
Cow position: chr23:5624154-5623854 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 161-464
Cow position: chr23:14738324-14738633 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 129

Conread position: 161-464
Cow position: chr23:14970529-14970230 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr23:25357771-25358059 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 161-464
Cow position: chr23:29471884-29471586 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr23:30623076-30622774 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 40

Conread position: 161-464
Cow position: chr23:33233897-33233604 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 101

Conread position: 163-397
Cow position: chr23:362215-361983 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 165-463
Cow position: chr23:610129-610426 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 84

Conread position: 165-464
Cow position: chr23:10554797-10554497 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 127

Conread position: 175-461
Cow position: chr23:7374119-7374392 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 117

Conread position: 42-151
Cow position: chr24:28688870-28688979 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 43-149
Cow position: chr24:34760969-34761075 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 139-270
Cow position: chr24:14146672-14146542 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 144-414
Cow position: chr24:19706738-19707002 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 144-462
Cow position: chr24:45087023-45087341 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 144-463
Cow position: chr24:6442938-6443254 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 147-350
Cow position: chr24:36036327-36036117 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 6

Conread position: 153-411
Cow position: chr24:9071338-9071081 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 139

Conread position: 153-463
Cow position: chr24:34270701-34271006 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 161-446
Cow position: chr24:207478-207201 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-459
Cow position: chr24:34761027-34761321 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-460
Cow position: chr24:5910336-5910634 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 130

Conread position: 161-460
Cow position: chr24:17566362-17566660 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-461
Cow position: chr24:17188756-17188457 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 42

Conread position: 161-462
Cow position: chr24:32359629-32359329 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 42

Conread position: 161-463
Cow position: chr24:3794000-3794300 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr24:6067826-6067529 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr24:6325854-6325554 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr24:14250066-14249765 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 161-463
Cow position: chr24:14352870-14353163 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr24:18112973-18113274 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 42

Conread position: 161-463
Cow position: chr24:22047551-22047256 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr24:22795076-22795373 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr24:33639980-33639680 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 161-464
Cow position: chr24:5862836-5862535 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr24:6035663-6035361 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 161-464
Cow position: chr24:7749138-7749436 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 161-464
Cow position: chr24:12147071-12146771 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr24:12202999-12202691 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 80, 70

Conread position: 161-464
Cow position: chr24:14760411-14760717 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 135

Conread position: 161-464
Cow position: chr24:32608829-32609127 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 161-464
Cow position: chr24:33229847-33230156 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 140

Conread position: 161-464
Cow position: chr24:41671376-41671671 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 103

Conread position: 163-461
Cow position: chr24:12377596-12377301 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 40

Conread position: 42-148
Cow position: chr25:20075633-20075739 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 139-463
Cow position: chr25:18330586-18330257 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 68

Conread position: 144-329
Cow position: chr25:6955265-6955448 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 0

Conread position: 144-463
Cow position: chr25:17585825-17585501 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 144-463
Cow position: chr25:36350935-36351253 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 161-340
Cow position: chr25:19682497-19682680 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 135

Conread position: 161-382
Cow position: chr25:9395623-9395846 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 77, 134

Conread position: 161-443
Cow position: chr25:26780871-26780591 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-453
Cow position: chr25:21950340-21950632 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 132

Conread position: 161-454
Cow position: chr25:18474413-18474697 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-454
Cow position: chr25:33838591-33838878 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-459
Cow position: chr25:20790722-20790411 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 42, 107

Conread position: 161-461
Cow position: chr25:20772124-20771824 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 161-463
Cow position: chr25:3688350-3688650 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr25:4858284-4857983 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr25:8655506-8655804 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr25:13956175-13955875 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr25:17210919-17210620 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr25:17994308-17994008 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr25:19923736-19924034 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr25:32610205-32609905 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr25:34121881-34121579 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr25:34164347-34164047 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr25:35553883-35554183 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr25:33979194-33978896 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 133

Conread position: 161-464
Cow position: chr25:41135533-41135242 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 162-462
Cow position: chr25:40322074-40321782 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 135, 63

Conread position: 162-464
Cow position: chr25:10137030-10137340 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 38

Conread position: 163-355
Cow position: chr25:16401674-16401484 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 40, 0

Conread position: 164-460
Cow position: chr25:41366930-41366652 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 164-464
Cow position: chr25:26681795-26682077 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 43-215
Cow position: chr26:30652960-30652786 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 105, 134

Conread position: 142-463
Cow position: chr26:800127-800451 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 64

Conread position: 142-464
Cow position: chr26:3689958-3690279 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 60

Conread position: 144-463
Cow position: chr26:13183763-13184081 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 150-463
Cow position: chr26:35121783-35121472 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 153-463
Cow position: chr26:1636953-1636643 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 153-463
Cow position: chr26:3571984-3571675 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 160-319
Cow position: chr26:21247242-21247399 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 132
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 160-452
Cow position: chr26:13976633-13976372 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 5, 0

Conread position: 161-322
Cow position: chr26:2201999-2202158 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 161-375
Cow position: chr26:4728854-4728646 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 131
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 161-400
Cow position: chr26:13773522-13773751 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-430
Cow position: chr26:14487790-14487528 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 42

Conread position: 161-431
Cow position: chr26:30569660-30569391 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 42

Conread position: 161-461
Cow position: chr26:755903-755613 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 161-461
Cow position: chr26:9100523-9100223 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 131

Conread position: 161-463
Cow position: chr26:4440295-4440000 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 161-463
Cow position: chr26:4728608-4728310 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr26:7559145-7558847 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr26:8885314-8885613 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 161-463
Cow position: chr26:16864745-16865046 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr26:18857586-18857885 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr26:22691857-22692156 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr26:26286331-26286630 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr26:28706592-28706292 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr26:30594158-30593869 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 161-463
Cow position: chr26:33253016-33252716 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr26:35560592-35560292 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr26:387151-387450 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 162-463
Cow position: chr26:1390454-1390753 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 162-463
Cow position: chr26:11537297-11537596 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 163-320
Cow position: chr26:34015310-34015466 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 129
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 126, 0

Conread position: 191-403
Cow position: chr26:11362200-11361990 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 100, 0

Conread position: 141-464
Cow position: chr27:16823566-16823250 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 143-463
Cow position: chr27:3653293-3652974 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 59

Conread position: 147-464
Cow position: chr27:10324517-10324208 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 147-464
Cow position: chr27:27729079-27728767 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 160-463
Cow position: chr27:10579368-10579669 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 161-328
Cow position: chr27:2681946-2682113 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 131

Conread position: 161-381
Cow position: chr27:15866877-15866657 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 157, 40

Conread position: 161-416
Cow position: chr27:8187262-8187511 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 161-463
Cow position: chr27:165494-165195 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr27:3649907-3650207 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr27:13353732-13354031 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr27:5853173-5853473 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 161-464
Cow position: chr27:8262263-8262567 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 131

Conread position: 161-464
Cow position: chr27:8427276-8427597 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 136

Conread position: 161-464
Cow position: chr27:13182859-13182562 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 45

Conread position: 161-464
Cow position: chr27:15033465-15033165 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr27:21451869-21452171 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 67

Conread position: 161-464
Cow position: chr27:26785243-26785538 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 174-464
Cow position: chr27:18740821-18741105 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 118

Conread position: 42-156
Cow position: chr28:22322421-22322533 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 43-160
Cow position: chr28:29807027-29806911 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 141-402
Cow position: chr28:17030646-17030376 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 214, 150

Conread position: 141-429
Cow position: chr28:8717501-8717219 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 141-463
Cow position: chr28:15966142-15965822 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 141-463
Cow position: chr28:18559524-18559204 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 141-463
Cow position: chr28:28471471-28471789 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 62

Conread position: 144-373
Cow position: chr28:25804325-25804553 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 21, 60

Conread position: 144-464
Cow position: chr28:4958052-4957727 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 151

Conread position: 161-290
Cow position: chr28:21104507-21104379 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 161-353
Cow position: chr28:3882315-3882505 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-418
Cow position: chr28:10303309-10303564 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 161-426
Cow position: chr28:7059702-7059965 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-454
Cow position: chr28:22353589-22353873 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 40

Conread position: 161-461
Cow position: chr28:23544095-23544387 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr28:444880-445171 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr28:1943824-1943524 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr28:6535326-6535025 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-463
Cow position: chr28:7830030-7830333 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 42

Conread position: 161-463
Cow position: chr28:12117768-12117468 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr28:13536148-13536448 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr28:15047680-15047980 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr28:15917055-15916756 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-463
Cow position: chr28:17369525-17369821 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr28:22582253-22582553 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr28:24886332-24886631 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr28:25828867-25829167 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr28:34581881-34581581 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr28:5768422-5768721 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 98

Conread position: 161-464
Cow position: chr28:7685470-7685157 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 161-464
Cow position: chr28:10530252-10529946 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 42

Conread position: 161-464
Cow position: chr28:19552909-19552612 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 42

Conread position: 161-464
Cow position: chr28:23839440-23839733 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr28:23868710-23869004 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr28:24671493-24671789 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 132

Conread position: 162-393
Cow position: chr28:17314868-17315097 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 163-464
Cow position: chr28:10772550-10772843 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 40

Conread position: 166-464
Cow position: chr28:26923151-26922860 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 175-461
Cow position: chr28:22322492-22322767 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 190-320
Cow position: chr28:33369954-33369832 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 190-442
Cow position: chr28:15973352-15973100 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 235, 101

Conread position: 144-464
Cow position: chr29:14208143-14207824 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 147-464
Cow position: chr29:9639100-9638795 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 153-463
Cow position: chr29:3330026-3330325 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 51

Conread position: 153-463
Cow position: chr29:31765474-31765782 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 161-320
Cow position: chr29:43326957-43327115 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 130, 0

Conread position: 161-344
Cow position: chr29:35265360-35265541 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 150
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 42, 0

Conread position: 161-374
Cow position: chr29:4164131-4164342 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-421
Cow position: chr29:35291106-35291356 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-432
Cow position: chr29:32515771-32516039 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-461
Cow position: chr29:41183738-41183441 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr29:727172-727472 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr29:2950109-2950409 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr29:10032211-10031910 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 42

Conread position: 161-463
Cow position: chr29:15569976-15570277 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 161-463
Cow position: chr29:16185336-16185036 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr29:19524696-19524398 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr29:21474592-21474892 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr29:24983128-24982828 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr29:29565898-29565596 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-464
Cow position: chr29:2745065-2744759 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 134

Conread position: 161-464
Cow position: chr29:8589299-8588993 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 134

Conread position: 161-464
Cow position: chr29:8667029-8667324 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr29:9332345-9332656 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 143

Conread position: 161-464
Cow position: chr29:27814230-27814519 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 161-464
Cow position: chr29:29056401-29056691 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 42

Conread position: 161-464
Cow position: chr29:38409640-38409940 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 162-463
Cow position: chr29:1742943-1743242 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 162-463
Cow position: chr29:14568740-14569039 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 35-156
Cow position: chr3:8605623-8605503 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 37-156
Cow position: chr3:60932558-60932676 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 37-156
Cow position: chr3:61677827-61677947 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 42-148
Cow position: chr3:26993422-26993528 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 42-160
Cow position: chr3:81374954-81374837 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 43-463
Cow position: chr3:29573827-29573425 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 32

Conread position: 94-464
Cow position: chr3:3837319-3836950 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 34

Conread position: 141-392
Cow position: chr3:67021665-67021426 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 143-319
Cow position: chr3:30334151-30334326 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 10

Conread position: 143-463
Cow position: chr3:42186806-42187125 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 147-374
Cow position: chr3:16293574-16293348 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 6

Conread position: 147-464
Cow position: chr3:37600073-37600389 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 153-463
Cow position: chr3:5474887-5475196 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 153-463
Cow position: chr3:49907685-49907378 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 154-408
Cow position: chr3:77697133-77696881 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 160-464
Cow position: chr3:12872464-12872762 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 41

Conread position: 160-464
Cow position: chr3:18761826-18762125 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 41

Conread position: 161-279
Cow position: chr3:69779847-69779964 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 161-317
Cow position: chr3:11334508-11334353 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 42

Conread position: 161-317
Cow position: chr3:11446790-11446953 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 42

Conread position: 161-323
Cow position: chr3:72669203-72669044 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 135
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 161-329
Cow position: chr3:29130449-29130612 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 161-331
Cow position: chr3:49999492-49999660 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 142
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 77, 42

Conread position: 161-338
Cow position: chr3:42424144-42423971 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 161-343
Cow position: chr3:822733-822553 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-372
Cow position: chr3:40004154-40003944 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-400
Cow position: chr3:36571079-36570839 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 42

Conread position: 161-405
Cow position: chr3:47986796-47987037 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-421
Cow position: chr3:64654025-64654280 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-457
Cow position: chr3:7155450-7155156 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-459
Cow position: chr3:29282116-29282406 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-460
Cow position: chr3:16620399-16620100 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 131

Conread position: 161-460
Cow position: chr3:29311500-29311799 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 42

Conread position: 161-461
Cow position: chr3:58950816-58951113 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 40

Conread position: 161-461
Cow position: chr3:72390274-72390573 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 161-461
Cow position: chr3:83761982-83761683 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 42

Conread position: 161-462
Cow position: chr3:16332776-16333072 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 114

Conread position: 161-462
Cow position: chr3:42507857-42507558 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-462
Cow position: chr3:53879910-53879610 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-462
Cow position: chr3:66968523-66968223 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr3:302578-302878 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:2075137-2075437 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:3372828-3372530 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:6785673-6785970 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:6838386-6838689 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 42

Conread position: 161-463
Cow position: chr3:12797705-12797405 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 161-463
Cow position: chr3:14212747-14213047 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:16226231-16226531 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:18862797-18863094 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:18875325-18875027 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:19958951-19959251 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:21593639-21593938 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:30615584-30615285 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 42

Conread position: 161-463
Cow position: chr3:31022036-31022329 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:36861747-36861450 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:37894188-37894490 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 42

Conread position: 161-463
Cow position: chr3:37972385-37972683 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:39921589-39921291 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:40520583-40520283 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:41018954-41018654 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:41207209-41206909 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr3:44927170-44927470 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:45097596-45097896 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:45947169-45946869 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:46683190-46683490 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 19

Conread position: 161-463
Cow position: chr3:47078256-47077956 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:51256295-51256595 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:53934667-53934951 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:61677891-61678190 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 65

Conread position: 161-463
Cow position: chr3:65178727-65179030 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr3:65536471-65536771 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:66887841-66887536 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 42

Conread position: 161-463
Cow position: chr3:68889216-68888916 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr3:72174949-72174642 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 42

Conread position: 161-463
Cow position: chr3:78520404-78520702 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-464
Cow position: chr3:2507285-2506990 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 161-464
Cow position: chr3:13085184-13084884 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 42

Conread position: 161-464
Cow position: chr3:23735916-23735613 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 112

Conread position: 161-464
Cow position: chr3:35884764-35884464 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 96

Conread position: 161-464
Cow position: chr3:49649574-49649871 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 42

Conread position: 161-464
Cow position: chr3:61242739-61243036 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 42

Conread position: 163-463
Cow position: chr3:24265557-24265854 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 176-464
Cow position: chr3:47469024-47468742 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 187
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 42

Conread position: 190-461
Cow position: chr3:80759596-80759863 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 64

Conread position: 42-163
Cow position: chr4:18107944-18108066 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 43-156
Cow position: chr4:61449617-61449728 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 76-454
Cow position: chr4:54170502-54170868 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 31

Conread position: 147-436
Cow position: chr4:18973642-18973926 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 6

Conread position: 147-458
Cow position: chr4:3252404-3252098 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 6

Conread position: 149-460
Cow position: chr4:4673289-4672963 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 55

Conread position: 153-461
Cow position: chr4:67767572-67767877 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 160-464
Cow position: chr4:8760441-8760753 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 103, 167

Conread position: 161-296
Cow position: chr4:23451862-23451731 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 161-341
Cow position: chr4:8700300-8700478 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 161-387
Cow position: chr4:47269329-47269555 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 42

Conread position: 161-436
Cow position: chr4:34209256-34209526 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 161-460
Cow position: chr4:22237255-22236972 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 39

Conread position: 161-463
Cow position: chr4:162242-162542 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 161-463
Cow position: chr4:3129017-3129317 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr4:6266054-6265773 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr4:9375927-9375631 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr4:17821692-17821992 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr4:18738582-18738282 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr4:19586094-19585794 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr4:20616556-20616256 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr4:20656903-20656604 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 42

Conread position: 161-463
Cow position: chr4:24140037-24140337 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr4:30474541-30474842 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 42

Conread position: 161-463
Cow position: chr4:46585745-46585445 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr4:47115998-47116298 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr4:48732838-48733138 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr4:54161901-54161605 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr4:62120168-62120469 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 39

Conread position: 161-464
Cow position: chr4:1499929-1499634 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 45

Conread position: 166-355
Cow position: chr4:35868354-35868551 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 134

Conread position: 171-345
Cow position: chr4:13327956-13327782 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 32

Conread position: 175-461
Cow position: chr4:22743559-22743842 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 116

Conread position: 176-339
Cow position: chr4:28613058-28613216 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 190-464
Cow position: chr4:11308824-11309108 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 47

Conread position: 35-149
Cow position: chr5:34637634-34637749 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 37-153
Cow position: chr5:36406353-36406470 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 43-160
Cow position: chr5:54868420-54868536 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 132-463
Cow position: chr5:53854934-53855246 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 89

Conread position: 137-463
Cow position: chr5:443075-442747 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 70

Conread position: 141-463
Cow position: chr5:56931649-56931329 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 143-340
Cow position: chr5:23353984-23354183 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 147, 60

Conread position: 143-464
Cow position: chr5:12133836-12134156 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 61

Conread position: 150-464
Cow position: chr5:31634686-31634987 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 69

Conread position: 153-322
Cow position: chr5:10066297-10066129 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 10, 51

Conread position: 153-463
Cow position: chr5:38662978-38663283 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 153-463
Cow position: chr5:72857128-72857438 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 161-315
Cow position: chr5:29763169-29763321 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 161-319
Cow position: chr5:18667569-18667725 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 161-320
Cow position: chr5:51684355-51684201 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 161-323
Cow position: chr5:26073526-26073366 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 42

Conread position: 161-363
Cow position: chr5:17425888-17425687 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 130, 0

Conread position: 161-363
Cow position: chr5:20408799-20408598 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 130, 0

Conread position: 161-406
Cow position: chr5:5787068-5786824 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 42

Conread position: 161-436
Cow position: chr5:7140838-7140566 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 134

Conread position: 161-459
Cow position: chr5:28223701-28223995 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 132

Conread position: 161-463
Cow position: chr5:2977047-2977349 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 42

Conread position: 161-463
Cow position: chr5:4963124-4962825 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:5106485-5106784 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:10479384-10479082 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 133

Conread position: 161-463
Cow position: chr5:11835200-11834900 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:18118713-18118413 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:20107768-20107470 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:23882068-23881769 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:29255952-29255652 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:31285119-31285419 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:31709562-31709853 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:36369730-36369430 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 161-463
Cow position: chr5:37380348-37380646 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:38883426-38883127 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:39363134-39363434 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:45179585-45179287 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:46779777-46780072 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 12

Conread position: 161-463
Cow position: chr5:46816841-46816542 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:47565055-47564755 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:47565523-47565223 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:47590332-47590033 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:54927660-54927364 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 161-463
Cow position: chr5:54929988-54929692 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 161-463
Cow position: chr5:54951860-54951555 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 42

Conread position: 161-463
Cow position: chr5:55722791-55723091 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:57986757-57987054 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:58192177-58192477 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr5:59064705-59065005 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 161-463
Cow position: chr5:75754862-75754562 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr5:10542414-10542115 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr5:47343135-47343437 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 42

Conread position: 161-464
Cow position: chr5:60519425-60519122 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 238, 130

Conread position: 161-464
Cow position: chr5:70593740-70593440 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 162-445
Cow position: chr5:36410177-36409896 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 162-463
Cow position: chr5:51746481-51746780 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 163-464
Cow position: chr5:18250311-18250610 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 166-464
Cow position: chr5:31097552-31097264 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 7

Conread position: 190-460
Cow position: chr5:63648201-63647933 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 13

Conread position: 38-151
Cow position: chr6:6471598-6471485 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 43-157
Cow position: chr6:917401-917515 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 43-230
Cow position: chr6:1537048-1537232 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 132, 107

Conread position: 141-464
Cow position: chr6:32125326-32125650 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 143-464
Cow position: chr6:2111017-2110713 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 143-464
Cow position: chr6:50120548-50120233 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 107

Conread position: 148-464
Cow position: chr6:47988313-47988613 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 144

Conread position: 153-463
Cow position: chr6:40278444-40278753 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 50

Conread position: 161-317
Cow position: chr6:21856974-21856820 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 161-320
Cow position: chr6:55041767-55041613 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 161-320
Cow position: chr6:56926134-56926291 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 161-320
Cow position: chr6:60332745-60332903 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 130, 0

Conread position: 161-320
Cow position: chr6:64719717-64719873 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 161-326
Cow position: chr6:49442344-49442508 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 79, 42

Conread position: 161-387
Cow position: chr6:227557-227779 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 161-442
Cow position: chr6:53543082-53542805 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-443
Cow position: chr6:51150343-51150623 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-452
Cow position: chr6:67553633-67553922 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-459
Cow position: chr6:12352237-12352535 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 132

Conread position: 161-461
Cow position: chr6:28701165-28700866 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-461
Cow position: chr6:51877154-51877453 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 131

Conread position: 161-463
Cow position: chr6:3152616-3152913 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr6:12997820-12998117 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr6:16049892-16049595 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 42

Conread position: 161-463
Cow position: chr6:19706828-19707130 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 43

Conread position: 161-463
Cow position: chr6:21712107-21712407 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr6:22737305-22737005 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr6:23568192-23567907 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr6:25374707-25374407 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr6:27173242-27173542 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr6:28000995-28000695 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr6:28065391-28065689 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr6:37387967-37388267 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr6:62665176-62665476 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr6:6200731-6201031 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 161-464
Cow position: chr6:13740956-13741250 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 161-464
Cow position: chr6:16737275-16737573 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 50

Conread position: 161-464
Cow position: chr6:19059677-19059975 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 46

Conread position: 161-464
Cow position: chr6:36531675-36531977 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 42

Conread position: 161-464
Cow position: chr6:46764005-46763704 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 161-464
Cow position: chr6:55169874-55170172 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 42

Conread position: 161-464
Cow position: chr6:57308625-57308923 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 162-464
Cow position: chr6:61632337-61632044 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 163-463
Cow position: chr6:36901413-36901711 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 163-464
Cow position: chr6:42267124-42267418 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 181-464
Cow position: chr6:49444535-49444820 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 110

Conread position: 184-460
Cow position: chr6:7112292-7112017 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 108

Conread position: 35-163
Cow position: chr7:42431057-42431186 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 40-160
Cow position: chr7:49750330-49750449 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 42-157
Cow position: chr7:21571734-21571849 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 101
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 42-228
Cow position: chr7:752283-752105 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 139-464
Cow position: chr7:49844810-49844487 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 16

Conread position: 141-282
Cow position: chr7:12439-12299 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 12

Conread position: 141-463
Cow position: chr7:12214-11898 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 143-398
Cow position: chr7:64355491-64355745 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 143-464
Cow position: chr7:194440-194122 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 10

Conread position: 143-464
Cow position: chr7:51917308-51917620 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 143-464
Cow position: chr7:54089788-54089475 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 76

Conread position: 144-464
Cow position: chr7:49217226-49217545 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 152-464
Cow position: chr7:61652657-61652965 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 73

Conread position: 153-340
Cow position: chr7:956141-956326 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 59

Conread position: 153-460
Cow position: chr7:24797899-24797594 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 125

Conread position: 153-460
Cow position: chr7:64405793-64406095 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 161-269
Cow position: chr7:33064843-33064740 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 161-315
Cow position: chr7:37520971-37521120 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 161-326
Cow position: chr7:54482785-54482623 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 65

Conread position: 161-329
Cow position: chr7:18871514-18871351 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 39

Conread position: 161-342
Cow position: chr7:54657-54478 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 151
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-343
Cow position: chr7:250206-250029 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 54, 0

Conread position: 161-350
Cow position: chr7:21571793-21571979 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 161-393
Cow position: chr7:19398706-19398473 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 40, 132

Conread position: 161-401
Cow position: chr7:25845664-25845902 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-436
Cow position: chr7:10727588-10727316 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 161-443
Cow position: chr7:55486566-55486287 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-460
Cow position: chr7:536364-536067 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 42

Conread position: 161-461
Cow position: chr7:63771167-63771466 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 131

Conread position: 161-463
Cow position: chr7:548267-548567 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 42

Conread position: 161-463
Cow position: chr7:899763-899463 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr7:982103-981803 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr7:1441343-1441046 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr7:7249273-7248973 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 161-463
Cow position: chr7:7278049-7278348 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr7:14098398-14098702 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 42

Conread position: 161-463
Cow position: chr7:21423876-21423582 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr7:23141045-23141345 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr7:25443259-25443560 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-463
Cow position: chr7:28621728-28622029 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr7:33296684-33296984 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr7:34548083-34548383 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr7:37166336-37166636 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr7:37507265-37506964 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 42

Conread position: 161-463
Cow position: chr7:46266654-46266953 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr7:50961566-50961866 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 42

Conread position: 161-464
Cow position: chr7:19467005-19466705 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 161-464
Cow position: chr7:20770566-20770273 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr7:26455751-26455461 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 42

Conread position: 161-464
Cow position: chr7:32283174-32283470 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 42

Conread position: 161-464
Cow position: chr7:37454543-37454842 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 111

Conread position: 161-464
Cow position: chr7:42301949-42301648 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr7:58614061-58614363 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 42

Conread position: 162-463
Cow position: chr7:23445111-23445411 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 41

Conread position: 162-464
Cow position: chr7:46799570-46799270 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 163-445
Cow position: chr7:39850641-39850919 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 163-461
Cow position: chr7:59659998-59660300 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 139

Conread position: 163-463
Cow position: chr7:64012920-64013216 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 40

Conread position: 43-149
Cow position: chr8:53320137-53320243 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 43-156
Cow position: chr8:42009561-42009673 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 43-157
Cow position: chr8:22030733-22030847 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 134-464
Cow position: chr8:38043493-38043155 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 31

Conread position: 141-463
Cow position: chr8:24193190-24193510 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 141-464
Cow position: chr8:19423637-19423319 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 142-359
Cow position: chr8:21212019-21212237 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 151

Conread position: 143-270
Cow position: chr8:23651285-23651158 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 61

Conread position: 143-461
Cow position: chr8:30489241-30488929 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 61

Conread position: 143-463
Cow position: chr8:1500293-1499975 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 144-463
Cow position: chr8:32042448-32042764 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 147-443
Cow position: chr8:27152765-27152476 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 153-458
Cow position: chr8:11136466-11136176 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 153-463
Cow position: chr8:50762061-50762370 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 161-269
Cow position: chr8:36561073-36560967 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 161-319
Cow position: chr8:16940299-16940142 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 42

Conread position: 161-320
Cow position: chr8:1820539-1820383 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 20

Conread position: 161-320
Cow position: chr8:8820901-8821060 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 42

Conread position: 161-320
Cow position: chr8:46106073-46106230 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 123

Conread position: 161-322
Cow position: chr8:6061806-6061647 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 133
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 161-322
Cow position: chr8:31976730-31976570 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 136
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 130, 0

Conread position: 161-408
Cow position: chr8:34253215-34253460 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-443
Cow position: chr8:60267044-60267324 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-458
Cow position: chr8:19988503-19988221 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-461
Cow position: chr8:46953354-46953652 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-462
Cow position: chr8:26868934-26868635 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:1583151-1583448 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 161-463
Cow position: chr8:3956855-3957155 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:6464472-6464172 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 42

Conread position: 161-463
Cow position: chr8:6588357-6588057 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:7051172-7050872 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:8382075-8382366 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:8652679-8652379 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:8667148-8666849 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr8:12078132-12077832 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:14258751-14259052 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr8:17434378-17434678 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:21090654-21090354 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:22531549-22531250 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:22568618-22568318 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:25534805-25535104 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:28880076-28880375 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:32607707-32607407 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:35291551-35291251 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:39740013-39739714 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:41659135-41658834 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 40

Conread position: 161-463
Cow position: chr8:44016881-44017181 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:46961696-46961996 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:47065926-47065626 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:47463212-47463511 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:50430466-50430170 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:50817532-50817832 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 42

Conread position: 161-463
Cow position: chr8:55270851-55270552 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:60064773-60065071 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr8:60769726-60769426 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr8:1998854-1999151 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 42

Conread position: 161-464
Cow position: chr8:26039293-26039585 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 161-464
Cow position: chr8:26625092-26625394 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 64

Conread position: 161-464
Cow position: chr8:42117027-42117328 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr8:45354828-45354531 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 161-464
Cow position: chr8:46480650-46480336 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 142

Conread position: 161-464
Cow position: chr8:49620115-49620416 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 163-464
Cow position: chr8:42748726-42749029 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 48

Conread position: 190-464
Cow position: chr8:51603180-51602908 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 36

Conread position: 194-464
Cow position: chr8:24234386-24234655 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 36-149
Cow position: chr9:49981759-49981874 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 37-156
Cow position: chr9:25959407-25959289 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 42-146
Cow position: chr9:30401553-30401657 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 43-160
Cow position: chr9:54413338-54413222 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 137-325
Cow position: chr9:42404620-42404804 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 66, 0

Conread position: 141-463
Cow position: chr9:45876824-45877148 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 66

Conread position: 143-464
Cow position: chr9:217805-217476 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 194

Conread position: 147-399
Cow position: chr9:55621320-55621074 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 6

Conread position: 153-463
Cow position: chr9:1307031-1306720 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 161-271
Cow position: chr9:49220937-49220828 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 161-296
Cow position: chr9:2873805-2873938 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 161-309
Cow position: chr9:54459172-54459026 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 161-350
Cow position: chr9:58133273-58133078 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 161-372
Cow position: chr9:27107249-27107041 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-372
Cow position: chr9:33999562-33999771 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 40, 65

Conread position: 161-373
Cow position: chr9:17307134-17307347 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 150, 130

Conread position: 161-373
Cow position: chr9:49981826-49982037 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 161-374
Cow position: chr9:13493068-13493270 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 161-374
Cow position: chr9:30139288-30139073 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 121

Conread position: 161-374
Cow position: chr9:61023626-61023413 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 196, 130

Conread position: 161-393
Cow position: chr9:25959343-25959115 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 222, 42

Conread position: 161-446
Cow position: chr9:6707588-6707305 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-460
Cow position: chr9:825575-825278 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 67

Conread position: 161-460
Cow position: chr9:26478372-26478076 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 48

Conread position: 161-460
Cow position: chr9:43670184-43670466 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 40

Conread position: 161-460
Cow position: chr9:44920592-44920892 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 106

Conread position: 161-461
Cow position: chr9:3052595-3052892 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:771918-771619 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:777481-777181 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:1070954-1070654 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:1838280-1838581 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 42

Conread position: 161-463
Cow position: chr9:2681818-2682118 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:3311618-3311916 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chr9:4191647-4191947 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:4673385-4673685 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 42

Conread position: 161-463
Cow position: chr9:4940169-4939864 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 12

Conread position: 161-463
Cow position: chr9:10643616-10643308 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 137

Conread position: 161-463
Cow position: chr9:10803002-10803302 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:13312887-13313172 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:18243653-18243353 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:18710822-18711122 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:19545840-19546148 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 42

Conread position: 161-463
Cow position: chr9:22570434-22570733 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 42

Conread position: 161-463
Cow position: chr9:29083236-29082937 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:29534149-29534449 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:31417186-31416886 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:37908177-37908478 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 42

Conread position: 161-463
Cow position: chr9:39303223-39302923 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chr9:42053200-42052906 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 161-463
Cow position: chr9:50840762-50841076 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 42

Conread position: 161-464
Cow position: chr9:126174-125887 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr9:1983699-1983989 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 161-464
Cow position: chr9:11477930-11477629 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr9:14045995-14046293 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr9:27898358-27898657 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chr9:34059304-34059003 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-464
Cow position: chr9:45975006-45974708 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 162-343
Cow position: chr9:39697113-39696933 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 151
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 162-464
Cow position: chr9:34917944-34918236 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 175-461
Cow position: chr9:4862231-4861950 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 117

Conread position: 185-464
Cow position: chr9:11850516-11850236 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 53

Conread position: 42-147
Cow position: chrX:10866690-10866585 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 43-157
Cow position: chrX:18244165-18244279 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 43-245
Cow position: chrX:37488909-37489115 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 154

Conread position: 44-156
Cow position: chrX:15140355-15140243 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 44-160
Cow position: chrX:150652-150768 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 141-464
Cow position: chrX:27616026-27616343 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 142-464
Cow position: chrX:11855383-11855708 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 153

Conread position: 144-305
Cow position: chrX:3569271-3569432 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 60

Conread position: 144-463
Cow position: chrX:2486412-2486092 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 60

Conread position: 144-464
Cow position: chrX:1947730-1947420 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 68

Conread position: 146-463
Cow position: chrX:21343619-21343932 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 9

Conread position: 146-463
Cow position: chrX:24735167-24735482 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 146-464
Cow position: chrX:40384268-40384585 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 57

Conread position: 146-464
Cow position: chrX:40601341-40601658 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 57

Conread position: 147-325
Cow position: chrX:40070387-40070210 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 6

Conread position: 147-355
Cow position: chrX:41791491-41791282 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 13, 6

Conread position: 147-463
Cow position: chrX:26760344-26760030 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 153-463
Cow position: chrX:26275367-26275677 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 156-374
Cow position: chrX:38228080-38227863 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 67, 47

Conread position: 157-463
Cow position: chrX:18462741-18462437 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 160-463
Cow position: chrX:3372616-3372315 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 160-463
Cow position: chrX:13030974-13030673 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 161-287
Cow position: chrX:20356757-20356632 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 161-336
Cow position: chrX:5426479-5426306 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 161-342
Cow position: chrX:15977715-15977536 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 149
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 42, 0

Conread position: 161-349
Cow position: chrX:7444145-7444331 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-353
Cow position: chrX:39292980-39292790 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-365
Cow position: chrX:13206190-13206392 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-373
Cow position: chrX:29790581-29790373 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 161-396
Cow position: chrX:22077104-22076871 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-424
Cow position: chrX:29779961-29780225 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 155

Conread position: 161-439
Cow position: chrX:15151437-15151163 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-461
Cow position: chrX:14782107-14781810 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-461
Cow position: chrX:27445915-27446231 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 186, 90

Conread position: 161-463
Cow position: chrX:2500393-2500093 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:2559722-2559422 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:2579657-2579957 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:3081893-3081593 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:3361059-3361359 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:3464839-3464538 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chrX:5124121-5123821 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:5406298-5406597 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:6372418-6372719 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 161-463
Cow position: chrX:6870326-6870025 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 42

Conread position: 161-463
Cow position: chrX:7096696-7096996 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:10931911-10932211 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:16086885-16086586 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:17054807-17055107 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:20742230-20742525 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:21768042-21768342 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:24769619-24769322 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:25289441-25289141 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:26617683-26617383 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:28518482-28518183 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 161-463
Cow position: chrX:29083305-29083616 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 42

Conread position: 161-463
Cow position: chrX:35533092-35533389 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:38330620-38330920 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-463
Cow position: chrX:39560414-39560114 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chrX:323152-323454 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 161-464
Cow position: chrX:11083368-11083071 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 102

Conread position: 161-464
Cow position: chrX:21592529-21592826 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 161-464
Cow position: chrX:22887898-22888197 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 161-464
Cow position: chrX:24173923-24173626 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 161-464
Cow position: chrX:27590792-27590494 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 42

Conread position: 161-464
Cow position: chrX:29722457-29722751 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-464
Cow position: chrX:30139546-30139245 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 162-320
Cow position: chrX:35024299-35024450 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 162-464
Cow position: chrX:44206201-44206502 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 129

Conread position: 163-461
Cow position: chrX:45903417-45903713 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 189-316
Cow position: chrX:8482704-8482830 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 36, 14

Conread position: 193-460
Cow position: chrX:29876788-29876526 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 30, 10