Cow genome map


           Conread name:
           Pla1-C0000037_O09
        

               Conread position:
               16-190
               

               Cow position:
               chr1:85688472-85688303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               170, 58
               

               Conread position:
               23-200
               

               Cow position:
               chr1:50287520-50287693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               58-406
               

               Cow position:
               chr1:48730562-48730879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               64-347
               

               Cow position:
               chr1:57359764-57359471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               79-371
               

               Cow position:
               chr1:100868075-100868359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               81-407
               

               Cow position:
               chr1:23512383-23512711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 12
               

               Conread position:
               82-407
               

               Cow position:
               chr1:39068688-39069007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 7
               

               Conread position:
               83-323
               

               Cow position:
               chr1:61284393-61284150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               94, 53
               

               Conread position:
               83-407
               

               Cow position:
               chr1:68672348-68672652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 10
               

               Conread position:
               85-236
               

               Cow position:
               chr1:17317125-17317271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               142, 15
               

               Conread position:
               85-370
               

               Cow position:
               chr1:3417596-3417332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               6, 26
               

               Conread position:
               86-216
               

               Cow position:
               chr1:20732484-20732613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               88, 7
               

               Conread position:
               86-218
               

               Cow position:
               chr1:43439102-43439235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 118
               

               Conread position:
               86-296
               

               Cow position:
               chr1:48702037-48701824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               100, 19
               

               Conread position:
               86-352
               

               Cow position:
               chr1:69185462-69185720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               41, 100
               

               Conread position:
               86-369
               

               Cow position:
               chr1:19304821-19304556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 84
               

               Conread position:
               87-407
               

               Cow position:
               chr1:8347372-8347071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               88-195
               

               Cow position:
               chr1:51626578-51626684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               88-372
               

               Cow position:
               chr1:65909763-65909495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               89-184
               

               Cow position:
               chr1:22448024-22448118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               89-302
               

               Cow position:
               chr1:46220963-46221181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               8, 38
               

               Conread position:
               89-328
               

               Cow position:
               chr1:1875646-1875412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               89-350
               

               Cow position:
               chr1:18547732-18547977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               183, 87
               

               Conread position:
               89-380
               

               Cow position:
               chr1:808557-808846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               7, 80
               

               Conread position:
               89-407
               

               Cow position:
               chr1:40206867-40207173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               89-407
               

               Cow position:
               chr1:68245058-68245360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               107, 89
               

               Conread position:
               89-407
               

               Cow position:
               chr1:95153463-95153167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 89
               

               Conread position:
               89-407
               

               Cow position:
               chr1:100770496-100770801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               200, 58
               

               Conread position:
               91-407
               

               Cow position:
               chr1:52956496-52956201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               109, 40
               

               Conread position:
               93-371
               

               Cow position:
               chr1:8359667-8359917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               93-406
               

               Cow position:
               chr1:98576290-98575994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 38
               

               Conread position:
               94-187
               

               Cow position:
               chr1:22466632-22466724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               94-222
               

               Cow position:
               chr1:85162315-85162441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               114, 84
               

               Conread position:
               94-249
               

               Cow position:
               chr1:67544832-67544982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               94-371
               

               Cow position:
               chr1:76436756-76436463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               94-372
               

               Cow position:
               chr1:67919032-67918739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               74, 37
               

               Conread position:
               94-407
               

               Cow position:
               chr1:45552998-45553296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               50, 85
               

               Conread position:
               95-211
               

               Cow position:
               chr1:89835734-89835620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               91, 83
               

               Conread position:
               95-226
               

               Cow position:
               chr1:68400055-68400188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               95-229
               

               Cow position:
               chr1:80422843-80422709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               111, 83
               

               Conread position:
               95-400
               

               Cow position:
               chr1:77892379-77892093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 84
               

               Conread position:
               95-407
               

               Cow position:
               chr1:5023522-5023816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 78
               

               Conread position:
               95-407
               

               Cow position:
               chr1:58037272-58036966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               96-181
               

               Cow position:
               chr1:99023794-99023878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               77
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               96-238
               

               Cow position:
               chr1:92384528-92384390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               122, 79
               

               Conread position:
               96-383
               

               Cow position:
               chr1:89741745-89742029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               101, 53
               

               Conread position:
               97-192
               

               Cow position:
               chr1:40069350-40069257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               97-216
               

               Cow position:
               chr1:65883424-65883303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               89, 81
               

               Conread position:
               98-216
               

               Cow position:
               chr1:89920715-89920595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               88, 80
               

               Conread position:
               98-237
               

               Cow position:
               chr1:43144547-43144405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 91
               

               Conread position:
               98-340
               

               Cow position:
               chr1:38055252-38055487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               99-378
               

               Cow position:
               chr1:24791692-24791969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 6
               

               Conread position:
               99-407
               

               Cow position:
               chr1:81580418-81580117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 72
               

               Conread position:
               100-201
               

               Cow position:
               chr1:95101158-95101060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               100-241
               

               Cow position:
               chr1:77588630-77588770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               88, 17
               

               Conread position:
               100-345
               

               Cow position:
               chr1:46100592-46100831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               101-213
               

               Cow position:
               chr1:75080333-75080445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 79
               

               Conread position:
               101-219
               

               Cow position:
               chr1:6166438-6166319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               105, 76
               

               Conread position:
               101-236
               

               Cow position:
               chr1:69265033-69264897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 21
               

               Conread position:
               101-327
               

               Cow position:
               chr1:76081043-76080834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               101-355
               

               Cow position:
               chr1:9679418-9679165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               89, 95
               

               Conread position:
               101-373
               

               Cow position:
               chr1:54732251-54732504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               101-376
               

               Cow position:
               chr1:95676042-95676312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               101-385
               

               Cow position:
               chr1:68253840-68253562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               85, 76
               

               Conread position:
               101-396
               

               Cow position:
               chr1:80336011-80336292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               221
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               135, 32
               

               Conread position:
               101-407
               

               Cow position:
               chr1:83748174-83747888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               272, 77
               

               Conread position:
               102-399
               

               Cow position:
               chr1:50992164-50991889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               105-197
               

               Cow position:
               chr1:69911314-69911222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 73
               

               Conread position:
               105-404
               

               Cow position:
               chr1:83582688-83582985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               74, 29
               

               Conread position:
               106-332
               

               Cow position:
               chr1:52505928-52506150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               106-368
               

               Cow position:
               chr1:59659297-59659548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               141, 79
               

               Conread position:
               106-406
               

               Cow position:
               chr1:57297709-57297425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               276, 65
               

               Conread position:
               106-445
               

               Cow position:
               chr1:36932397-36932068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 71
               

               Conread position:
               107-369
               

               Cow position:
               chr1:45873847-45874093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               205, 62
               

               Conread position:
               108-338
               

               Cow position:
               chr1:96323169-96322938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               98, 61
               

               Conread position:
               108-383
               

               Cow position:
               chr1:67305011-67305269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               206, 25
               

               Conread position:
               114-322
               

               Cow position:
               chr1:42404370-42404167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 93
               

               Conread position:
               116-298
               

               Cow position:
               chr1:9181878-9181700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               116-406
               

               Cow position:
               chr1:45007704-45007413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               116-407
               

               Cow position:
               chr1:21461115-21460817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               80, 107
               

               Conread position:
               116-407
               

               Cow position:
               chr1:52995246-52994968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               151, 62
               

               Conread position:
               118-447
               

               Cow position:
               chr1:67743549-67743879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               98, 60
               

               Conread position:
               121-390
               

               Cow position:
               chr1:3904333-3904595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               67, 22
               

               Conread position:
               121-407
               

               Cow position:
               chr1:48770036-48769751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 57
               

               Conread position:
               122-383
               

               Cow position:
               chr1:98897461-98897725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               60, 89
               

               Conread position:
               126-407
               

               Cow position:
               chr1:84241102-84240840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 18
               

               Conread position:
               137-333
               

               Cow position:
               chr1:49358265-49358069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 74
               

               Conread position:
               143-327
               

               Cow position:
               chr1:70291995-70291814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               155-358
               

               Cow position:
               chr1:100852913-100852705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               159-406
               

               Cow position:
               chr1:34771307-34771556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               161-397
               

               Cow position:
               chr1:5580247-5580016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 70
               

               Conread position:
               163-407
               

               Cow position:
               chr1:90868260-90868493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               166-407
               

               Cow position:
               chr1:48105253-48105486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               215, 5
               

               Conread position:
               168-381
               

               Cow position:
               chr1:36875213-36875004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               168-406
               

               Cow position:
               chr1:6972715-6972478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               29, 197
               

               Conread position:
               169-390
               

               Cow position:
               chr1:77880548-77880766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               169-402
               

               Cow position:
               chr1:3882269-3882508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               171-343
               

               Cow position:
               chr1:64960253-64960420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               171-353
               

               Cow position:
               chr1:87220635-87220461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               171-363
               

               Cow position:
               chr1:7793339-7793530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               171-384
               

               Cow position:
               chr1:28471017-28470796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               171-390
               

               Cow position:
               chr1:7908218-7908000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               209, 60
               

               Conread position:
               171-397
               

               Cow position:
               chr1:81613572-81613344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               171-407
               

               Cow position:
               chr1:53521098-53520860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               173-343
               

               Cow position:
               chr1:78185686-78185857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               178-406
               

               Cow position:
               chr1:71796138-71796367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               179-406
               

               Cow position:
               chr1:43822581-43822349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               20, 139
               

               Conread position:
               179-407
               

               Cow position:
               chr1:98512099-98511876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               180-347
               

               Cow position:
               chr1:23055221-23055054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 13
               

               Conread position:
               181-407
               

               Cow position:
               chr1:93810605-93810378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               41, 197
               

               Conread position:
               182-350
               

               Cow position:
               chr1:80306205-80306367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               185-403
               

               Cow position:
               chr1:102504740-102504527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               199, 146
               

               Conread position:
               185-407
               

               Cow position:
               chr1:92684524-92684744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               17, 189
               

               Conread position:
               187-337
               

               Cow position:
               chr1:99024066-99024214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               187-383
               

               Cow position:
               chr1:75383137-75382953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               187-407
               

               Cow position:
               chr1:6240116-6240331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               187-448
               

               Cow position:
               chr1:31390425-31390685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               122, 29
               

               Conread position:
               188-361
               

               Cow position:
               chr1:97750450-97750626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               188-407
               

               Cow position:
               chr1:18780161-18780390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               8, 215
               

               Conread position:
               188-407
               

               Cow position:
               chr1:44507141-44506916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               189-372
               

               Cow position:
               chr1:84010935-84010754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               17, 72
               

               Conread position:
               189-406
               

               Cow position:
               chr1:8624287-8624501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               191-407
               

               Cow position:
               chr1:27145493-27145702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 50
               

               Conread position:
               191-407
               

               Cow position:
               chr1:86579123-86578907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               181, 15
               

               Conread position:
               192-348
               

               Cow position:
               chr1:81452516-81452361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               193-404
               

               Cow position:
               chr1:71253396-71253602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               194-385
               

               Cow position:
               chr1:72285906-72286098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               31, 179
               

               Conread position:
               194-388
               

               Cow position:
               chr1:33996763-33996957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               12, 182
               

               Conread position:
               194-406
               

               Cow position:
               chr1:78067909-78068116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               14, 60
               

               Conread position:
               194-407
               

               Cow position:
               chr1:87937056-87936847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               195-342
               

               Cow position:
               chr1:42822433-42822283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-367
               

               Cow position:
               chr1:98684033-98683861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               11, 108
               

               Conread position:
               195-391
               

               Cow position:
               chr1:9143879-9143687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 127
               

               Conread position:
               195-393
               

               Cow position:
               chr1:8670934-8670733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 178
               

               Conread position:
               196-407
               

               Cow position:
               chr1:45670787-45670584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               196-407
               

               Cow position:
               chr1:69264964-69264758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               197-364
               

               Cow position:
               chr1:22461079-22461248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               197-376
               

               Cow position:
               chr1:55230133-55229954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               197-405
               

               Cow position:
               chr1:76285647-76285434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               197-406
               

               Cow position:
               chr1:11226090-11226296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 61
               

               Conread position:
               197-407
               

               Cow position:
               chr1:19885540-19885329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               22, 116
               

               Conread position:
               198-331
               

               Cow position:
               chr1:34318631-34318763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               198-407
               

               Cow position:
               chr1:13547819-13548036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 203
               

               Conread position:
               198-407
               

               Cow position:
               chr1:79164940-79165137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               181, 8
               

               Conread position:
               199-345
               

               Cow position:
               chr1:92095523-92095381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               23, 104
               

               Conread position:
               200-405
               

               Cow position:
               chr1:24777838-24778037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               6, 84
               

               Conread position:
               200-407
               

               Cow position:
               chr1:85549928-85550130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               164
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               202-383
               

               Cow position:
               chr1:78810025-78809846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               203-383
               

               Cow position:
               chr1:21093266-21093090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               203-407
               

               Cow position:
               chr1:74822602-74822397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               8, 29
               

               Conread position:
               204-405
               

               Cow position:
               chr1:65103762-65103568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               169, 24
               

               Conread position:
               205-345
               

               Cow position:
               chr1:24656392-24656254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               205-400
               

               Cow position:
               chr1:13414173-13413983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               181, 103
               

               Conread position:
               205-406
               

               Cow position:
               chr1:186132-186328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               162
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               169, 86
               

               Conread position:
               205-420
               

               Cow position:
               chr1:500322-500106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               165, 25
               

               Conread position:
               206-391
               

               Cow position:
               chr1:86340319-86340503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               206-406
               

               Cow position:
               chr1:33206735-33206927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               103, 26
               

               Conread position:
               206-406
               

               Cow position:
               chr1:54478476-54478273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               168, 22
               

               Conread position:
               208-375
               

               Cow position:
               chr1:76735335-76735499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               208-386
               

               Cow position:
               chr1:101177661-101177484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               87, 73
               

               Conread position:
               208-407
               

               Cow position:
               chr1:55357150-55357337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               208-407
               

               Cow position:
               chr1:63434661-63434858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               208-407
               

               Cow position:
               chr1:68763541-68763735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               37, 109
               

               Conread position:
               209-404
               

               Cow position:
               chr1:52912753-52912948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               154, 76
               

               Conread position:
               210-400
               

               Cow position:
               chr1:31272297-31272488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               210-404
               

               Cow position:
               chr1:61741824-61742019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               92, 104
               

               Conread position:
               210-407
               

               Cow position:
               chr1:6590176-6589988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               213-407
               

               Cow position:
               chr1:52039776-52039580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               160, 10
               

               Conread position:
               214-376
               

               Cow position:
               chr1:66752490-66752651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               215-380
               

               Cow position:
               chr1:67919274-67919110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               215-400
               

               Cow position:
               chr1:34159974-34159790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               77, 16
               

               Conread position:
               215-406
               

               Cow position:
               chr1:56225923-56225736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               215-406
               

               Cow position:
               chr1:97611518-97611712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               215-407
               

               Cow position:
               chr1:1165725-1165548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               215-407
               

               Cow position:
               chr1:64302103-64302300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 102
               

               Conread position:
               216-341
               

               Cow position:
               chr1:70416620-70416747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-381
               

               Cow position:
               chr1:79087721-79087888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               216-383
               

               Cow position:
               chr1:36998322-36998156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               216-407
               

               Cow position:
               chr1:68817660-68817851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               7, 95
               

               Conread position:
               216-407
               

               Cow position:
               chr1:73936005-73936204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               217-407
               

               Cow position:
               chr1:20950850-20950669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               217-407
               

               Cow position:
               chr1:25281521-25281713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               157, 7
               

               Conread position:
               217-407
               

               Cow position:
               chr1:98461420-98461235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               218-344
               

               Cow position:
               chr1:25021938-25022065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               218-383
               

               Cow position:
               chr1:11729312-11729146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               139
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               218-404
               

               Cow position:
               chr1:84768740-84768929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               218-407
               

               Cow position:
               chr1:22035748-22035556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               5, 146
               

               Conread position:
               218-407
               

               Cow position:
               chr1:93044154-93043967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               6, 113
               

               Conread position:
               218-441
               

               Cow position:
               chr1:72105543-72105326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               5, 113
               

               Conread position:
               219-349
               

               Cow position:
               chr1:31630150-31630282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               219-407
               

               Cow position:
               chr1:78697639-78697822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               128, 11
               

               Conread position:
               220-353
               

               Cow position:
               chr1:69691583-69691714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               220-397
               

               Cow position:
               chr1:43311897-43312075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               161, 151
               

               Conread position:
               220-404
               

               Cow position:
               chr1:22824039-22823853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               221-339
               

               Cow position:
               chr1:63905124-63905244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               221-376
               

               Cow position:
               chr1:54157429-54157273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               116, 151
               

               Conread position:
               221-383
               

               Cow position:
               chr1:97144332-97144491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 93
               

               Conread position:
               221-406
               

               Cow position:
               chr1:93528834-93528647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               73, 115
               

               Conread position:
               221-407
               

               Cow position:
               chr1:99642237-99642418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr1:101507492-101507305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               150, 38
               

               Conread position:
               222-345
               

               Cow position:
               chr1:98556987-98557110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-353
               

               Cow position:
               chr1:32014328-32014199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               222-360
               

               Cow position:
               chr1:69445464-69445323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               222-360
               

               Cow position:
               chr1:81568896-81569034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-365
               

               Cow position:
               chr1:759286-759429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-365
               

               Cow position:
               chr1:64019389-64019532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-370
               

               Cow position:
               chr1:56711469-56711615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 92
               

               Conread position:
               222-372
               

               Cow position:
               chr1:49980841-49980692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               222-376
               

               Cow position:
               chr1:78857197-78857352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-380
               

               Cow position:
               chr1:49334258-49334418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               222-382
               

               Cow position:
               chr1:6731312-6731152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               152, 133
               

               Conread position:
               222-383
               

               Cow position:
               chr1:22730866-22730705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               222-384
               

               Cow position:
               chr1:65881937-65881777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               222-384
               

               Cow position:
               chr1:78794099-78794261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-390
               

               Cow position:
               chr1:51446018-51445853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               222-397
               

               Cow position:
               chr1:61005431-61005601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               222-398
               

               Cow position:
               chr1:91874785-91874953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               222-402
               

               Cow position:
               chr1:84203643-84203465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               147, 35
               

               Conread position:
               222-406
               

               Cow position:
               chr1:20667611-20667793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr1:95974531-95974343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               161, 13
               

               Conread position:
               222-406
               

               Cow position:
               chr1:98583885-98583706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               104, 136
               

               Conread position:
               222-407
               

               Cow position:
               chr1:3815553-3815747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               123, 87
               

               Conread position:
               222-407
               

               Cow position:
               chr1:24534124-24534306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               10, 91
               

               Conread position:
               222-407
               

               Cow position:
               chr1:25735000-25734816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               222-407
               

               Cow position:
               chr1:26894840-26895030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr1:37321870-37322054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               145, 84
               

               Conread position:
               222-407
               

               Cow position:
               chr1:47233346-47233531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr1:50930847-50931029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               161, 90
               

               Conread position:
               222-407
               

               Cow position:
               chr1:53623084-53622907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr1:76019564-76019748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               222-407
               

               Cow position:
               chr1:80422404-80422228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr1:84255899-84255711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr1:88360010-88359828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr1:91066020-91066205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               151, 77
               

               Conread position:
               222-407
               

               Cow position:
               chr1:93554968-93554786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               116, 111
               

               Conread position:
               222-407
               

               Cow position:
               chr1:101834948-101834769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               22, 91
               

               Conread position:
               222-407
               

               Cow position:
               chr1:101866366-101866551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               148, 35
               

               Conread position:
               222-407
               

               Cow position:
               chr1:102266137-102266322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               152, 18
               

               Conread position:
               222-417
               

               Cow position:
               chr1:69481818-69482015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               150, 25
               

               Conread position:
               223-343
               

               Cow position:
               chr1:45673885-45673765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-346
               

               Cow position:
               chr1:69411566-69411690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               223-348
               

               Cow position:
               chr1:67539690-67539564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               103, 88
               

               Conread position:
               223-353
               

               Cow position:
               chr1:23633799-23633931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               223-361
               

               Cow position:
               chr1:92603150-92603011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               223-364
               

               Cow position:
               chr1:95153002-95152861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-366
               

               Cow position:
               chr1:4582681-4582538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               223-372
               

               Cow position:
               chr1:51860430-51860579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-372
               

               Cow position:
               chr1:63079138-63078992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               223-373
               

               Cow position:
               chr1:46245610-46245768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               89, 54
               

               Conread position:
               223-376
               

               Cow position:
               chr1:100823168-100823016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               223-379
               

               Cow position:
               chr1:57089550-57089704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               223-380
               

               Cow position:
               chr1:8287500-8287655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               223-381
               

               Cow position:
               chr1:32001188-32001340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 89
               

               Conread position:
               223-387
               

               Cow position:
               chr1:73719593-73719428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               223-391
               

               Cow position:
               chr1:74084060-74084225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-391
               

               Cow position:
               chr1:77739852-77739686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               223-393
               

               Cow position:
               chr1:95835667-95835836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               139
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               223-396
               

               Cow position:
               chr1:94226424-94226596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               223-400
               

               Cow position:
               chr1:3923669-3923842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-403
               

               Cow position:
               chr1:100569287-100569106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               223-404
               

               Cow position:
               chr1:54156600-54156783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               151
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               223-405
               

               Cow position:
               chr1:4291295-4291110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               100, 89
               

               Conread position:
               223-405
               

               Cow position:
               chr1:43388921-43389101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               142, 87
               

               Conread position:
               223-406
               

               Cow position:
               chr1:18936707-18936886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               159, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr1:635325-635141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr1:43352525-43352710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               150, 109
               

               Conread position:
               223-407
               

               Cow position:
               chr1:53370214-53370029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               150, 109
               

               Conread position:
               223-407
               

               Cow position:
               chr1:56618524-56618703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               149, 69
               

               Conread position:
               223-407
               

               Cow position:
               chr1:57420605-57420779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr1:59519045-59518866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               150, 30
               

               Conread position:
               223-407
               

               Cow position:
               chr1:71350596-71350779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr1:72068703-72068891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr1:81481251-81481437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr1:95558168-95557984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               151, 170
               

               Conread position:
               223-407
               

               Cow position:
               chr1:96081609-96081428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               161, 12
               

               Conread position:
               223-407
               

               Cow position:
               chr1:96964447-96964268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-407
               

               Cow position:
               chr1:97696875-97696690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               150, 89
               

               Conread position:
               223-407
               

               Cow position:
               chr1:100474365-100474179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               223-419
               

               Cow position:
               chr1:97779122-97778926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               138, 59
               

               Conread position:
               224-331
               

               Cow position:
               chr1:98396755-98396862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-349
               

               Cow position:
               chr1:87149685-87149810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-371
               

               Cow position:
               chr1:46030237-46030378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               224-381
               

               Cow position:
               chr1:42360418-42360259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               224-382
               

               Cow position:
               chr1:43311641-43311802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               224-400
               

               Cow position:
               chr1:98360274-98360445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               150, 76
               

               Conread position:
               224-405
               

               Cow position:
               chr1:74928014-74927832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               150, 170
               

               Conread position:
               224-407
               

               Cow position:
               chr1:3138043-3137877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               224-437
               

               Cow position:
               chr1:2462507-2462296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               10, 87
               

               Conread position:
               224-445
               

               Cow position:
               chr1:56477722-56477498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               149, 209
               

               Conread position:
               225-362
               

               Cow position:
               chr1:101280609-101280742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               225-389
               

               Cow position:
               chr1:15334020-15333861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               226-405
               

               Cow position:
               chr1:98594693-98594522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr1:100706255-100706081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               17, 101
               

               Conread position:
               228-376
               

               Cow position:
               chr1:49433138-49433286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               228-407
               

               Cow position:
               chr1:28563442-28563625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               8, 85
               

               Conread position:
               228-407
               

               Cow position:
               chr1:41115593-41115767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               121, 82
               

               Conread position:
               228-407
               

               Cow position:
               chr1:96583465-96583653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               230-343
               

               Cow position:
               chr1:52370048-52370160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               230-345
               

               Cow position:
               chr1:81179220-81179339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 10
               

               Conread position:
               230-348
               

               Cow position:
               chr1:64706616-64706499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               230-381
               

               Cow position:
               chr1:47402652-47402500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               101, 47
               

               Conread position:
               230-396
               

               Cow position:
               chr1:30047479-30047641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               143, 62
               

               Conread position:
               230-405
               

               Cow position:
               chr1:91811903-91811731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               13, 95
               

               Conread position:
               230-407
               

               Cow position:
               chr1:24876386-24876209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               147, 93
               

               Conread position:
               230-407
               

               Cow position:
               chr1:46218697-46218520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               151, 101
               

               Conread position:
               230-407
               

               Cow position:
               chr1:52052593-52052773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-335
               

               Cow position:
               chr1:28985443-28985546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               231-336
               

               Cow position:
               chr1:70044476-70044374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               231-343
               

               Cow position:
               chr1:84288526-84288414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-344
               

               Cow position:
               chr1:81638671-81638558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-347
               

               Cow position:
               chr1:19855275-19855164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               231-348
               

               Cow position:
               chr1:45283319-45283200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               231-356
               

               Cow position:
               chr1:76739787-76739912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-360
               

               Cow position:
               chr1:93590463-93590592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-360
               

               Cow position:
               chr1:101525802-101525931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-362
               

               Cow position:
               chr1:42178868-42178737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-369
               

               Cow position:
               chr1:61011304-61011166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-370
               

               Cow position:
               chr1:6381894-6381756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               231-370
               

               Cow position:
               chr1:45315513-45315652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-371
               

               Cow position:
               chr1:73721484-73721343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               231-372
               

               Cow position:
               chr1:16060882-16061022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr1:38706732-38706872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               231-372
               

               Cow position:
               chr1:84103938-84104079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-372
               

               Cow position:
               chr1:99570364-99570505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               231-376
               

               Cow position:
               chr1:1053702-1053559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               231-376
               

               Cow position:
               chr1:102648401-102648256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-379
               

               Cow position:
               chr1:852293-852143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               231-381
               

               Cow position:
               chr1:40530979-40531127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 81
               

               Conread position:
               231-382
               

               Cow position:
               chr1:72011690-72011842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               231-382
               

               Cow position:
               chr1:82936474-82936626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               231-386
               

               Cow position:
               chr1:63530683-63530527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 142
               

               Conread position:
               231-387
               

               Cow position:
               chr1:39417992-39418144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               231-387
               

               Cow position:
               chr1:67529178-67529022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-387
               

               Cow position:
               chr1:71915997-71916153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               143, 99
               

               Conread position:
               231-388
               

               Cow position:
               chr1:102349629-102349780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               231-395
               

               Cow position:
               chr1:87095091-87095254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-397
               

               Cow position:
               chr1:81582237-81582072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               91, 28
               

               Conread position:
               231-401
               

               Cow position:
               chr1:92996768-92996943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               231-403
               

               Cow position:
               chr1:11913754-11913931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               231-403
               

               Cow position:
               chr1:100552098-100551921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr1:874777-874600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr1:10778686-10778515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr1:49082866-49082690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr1:75250233-75250061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               143, 101
               

               Conread position:
               231-405
               

               Cow position:
               chr1:96019351-96019183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-406
               

               Cow position:
               chr1:4027986-4027816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               142, 60
               

               Conread position:
               231-406
               

               Cow position:
               chr1:24406774-24406945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr1:34856505-34856682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr1:76613012-76613188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr1:1956212-1956386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr1:3352577-3352750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr1:7740070-7739893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               139, 75
               

               Conread position:
               231-407
               

               Cow position:
               chr1:8349201-8349369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               231-407
               

               Cow position:
               chr1:21954101-21954284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               131, 26
               

               Conread position:
               231-407
               

               Cow position:
               chr1:28177127-28176957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               231-407
               

               Cow position:
               chr1:41252287-41252459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               107, 86
               

               Conread position:
               231-407
               

               Cow position:
               chr1:47886357-47886538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr1:54258689-54258510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               142, 55
               

               Conread position:
               231-407
               

               Cow position:
               chr1:55428833-55429011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr1:60987112-60986933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr1:68676485-68676309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               14, 113
               

               Conread position:
               231-407
               

               Cow position:
               chr1:72813739-72813562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               142, 124
               

               Conread position:
               231-407
               

               Cow position:
               chr1:76657944-76658132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr1:80841769-80841600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr1:82880767-82880592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               151, 88
               

               Conread position:
               231-407
               

               Cow position:
               chr1:87072818-87072643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               141, 26
               

               Conread position:
               231-407
               

               Cow position:
               chr1:89388467-89388285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 168
               

               Conread position:
               231-407
               

               Cow position:
               chr1:89449023-89448845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr1:99609491-99609316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               142, 78
               

               Conread position:
               231-407
               

               Cow position:
               chr1:102753981-102753800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               100, 22
               

               Conread position:
               231-408
               

               Cow position:
               chr1:6941591-6941410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               97, 148
               

               Conread position:
               231-408
               

               Cow position:
               chr1:6959004-6958823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               97, 148
               

               Conread position:
               231-432
               

               Cow position:
               chr1:99221233-99221431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               142, 22
               

               Conread position:
               231-437
               

               Cow position:
               chr1:102768300-102768098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               129, 78
               

               Conread position:
               231-441
               

               Cow position:
               chr1:30417925-30418123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               178, 104
               

               Conread position:
               231-448
               

               Cow position:
               chr1:47790543-47790758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               149, 49
               

               Conread position:
               231-464
               

               Cow position:
               chr1:83606327-83606560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               134, 172
               

               Conread position:
               232-359
               

               Cow position:
               chr1:73551386-73551515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               232-373
               

               Cow position:
               chr1:45478741-45478878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               232-386
               

               Cow position:
               chr1:242679-242524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               232-386
               

               Cow position:
               chr1:22192891-22192734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               232-388
               

               Cow position:
               chr1:52435394-52435236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               232-395
               

               Cow position:
               chr1:62997918-62997756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               120, 80
               

               Conread position:
               232-400
               

               Cow position:
               chr1:59147223-59147392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 68
               

               Conread position:
               232-402
               

               Cow position:
               chr1:3965955-3965792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               232-403
               

               Cow position:
               chr1:38277907-38278079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               160, 25
               

               Conread position:
               232-405
               

               Cow position:
               chr1:23186677-23186851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               130, 67
               

               Conread position:
               232-406
               

               Cow position:
               chr1:16961888-16962060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               232-407
               

               Cow position:
               chr1:8737-8564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr1:4032754-4032576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               148
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr1:38419145-38418975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               232-407
               

               Cow position:
               chr1:89076511-89076681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               233-338
               

               Cow position:
               chr1:1380118-1380013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-372
               

               Cow position:
               chr1:3914798-3914936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               233-376
               

               Cow position:
               chr1:3762341-3762477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               233-381
               

               Cow position:
               chr1:43872199-43872347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               135, 66
               

               Conread position:
               233-382
               

               Cow position:
               chr1:81629729-81629875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               233-400
               

               Cow position:
               chr1:65318695-65318529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               233-406
               

               Cow position:
               chr1:31934628-31934461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               233-406
               

               Cow position:
               chr1:42541719-42541546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               151, 138
               

               Conread position:
               233-407
               

               Cow position:
               chr1:29626792-29626964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               233-407
               

               Cow position:
               chr1:42138979-42138804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr1:42482318-42482151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr1:92989711-92989537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               233-441
               

               Cow position:
               chr1:56832658-56832859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               7, 38
               

               Conread position:
               233-446
               

               Cow position:
               chr1:71665816-71666023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               140, 30
               

               Conread position:
               234-371
               

               Cow position:
               chr1:81809019-81809155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               234-390
               

               Cow position:
               chr1:35162530-35162373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               234-403
               

               Cow position:
               chr1:7971532-7971367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               104, 137
               

               Conread position:
               234-406
               

               Cow position:
               chr1:235642-235806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 92
               

               Conread position:
               234-406
               

               Cow position:
               chr1:42868820-42868989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               147, 76
               

               Conread position:
               234-407
               

               Cow position:
               chr1:45019680-45019860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr1:45223701-45223527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               138, 160
               

               Conread position:
               234-426
               

               Cow position:
               chr1:96365778-96365591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               146, 22
               

               Conread position:
               235-344
               

               Cow position:
               chr1:63460997-63460888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-364
               

               Cow position:
               chr1:83301831-83301962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               235-368
               

               Cow position:
               chr1:85712558-85712426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               235-371
               

               Cow position:
               chr1:69940704-69940840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-371
               

               Cow position:
               chr1:97232079-97231943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-372
               

               Cow position:
               chr1:21823481-21823344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-377
               

               Cow position:
               chr1:88338784-88338645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               235-379
               

               Cow position:
               chr1:5636939-5637083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 137
               

               Conread position:
               235-379
               

               Cow position:
               chr1:96599166-96599314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 98
               

               Conread position:
               235-383
               

               Cow position:
               chr1:38205593-38205447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               235-389
               

               Cow position:
               chr1:6964962-6965119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 141
               

               Conread position:
               235-391
               

               Cow position:
               chr1:98413891-98413737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-399
               

               Cow position:
               chr1:26427742-26427909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               235-401
               

               Cow position:
               chr1:31499744-31499576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               235-407
               

               Cow position:
               chr1:6826180-6826347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr1:19466170-19466004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr1:22525997-22525823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr1:27881726-27881560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr1:30442075-30441903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               133, 74
               

               Conread position:
               235-407
               

               Cow position:
               chr1:37726300-37726472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 158
               

               Conread position:
               235-407
               

               Cow position:
               chr1:49317378-49317548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr1:52662054-52662227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               146, 111
               

               Conread position:
               235-407
               

               Cow position:
               chr1:53308275-53308446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               139, 39
               

               Conread position:
               235-407
               

               Cow position:
               chr1:62235328-62235500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               49, 78
               

               Conread position:
               235-407
               

               Cow position:
               chr1:69539810-69539645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr1:72034806-72034976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               14, 8
               

               Conread position:
               235-407
               

               Cow position:
               chr1:75933385-75933220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               145, 77
               

               Conread position:
               235-441
               

               Cow position:
               chr1:16766970-16767168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               174, 8
               

               Conread position:
               235-441
               

               Cow position:
               chr1:48581247-48581046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               236-370
               

               Cow position:
               chr1:102494998-102494874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               236-378
               

               Cow position:
               chr1:95618760-95618618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-383
               

               Cow position:
               chr1:42545661-42545807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               236-404
               

               Cow position:
               chr1:49824946-49825119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 162
               

               Conread position:
               236-407
               

               Cow position:
               chr1:19515501-19515667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr1:88618714-88618543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               139, 157
               

               Conread position:
               237-383
               

               Cow position:
               chr1:74081864-74082009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               237-407
               

               Cow position:
               chr1:21787453-21787278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               237-407
               

               Cow position:
               chr1:43855412-43855249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               137, 74
               

               Conread position:
               237-407
               

               Cow position:
               chr1:53425294-53425123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               82, 135
               

               Conread position:
               237-407
               

               Cow position:
               chr1:101632220-101632391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               238-386
               

               Cow position:
               chr1:5006277-5006131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               238-408
               

               Cow position:
               chr1:97794438-97794602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               136, 70
               

               Conread position:
               238-445
               

               Cow position:
               chr1:30504617-30504411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               239-369
               

               Cow position:
               chr1:24561394-24561524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               239-369
               

               Cow position:
               chr1:24570832-24570962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               239-376
               

               Cow position:
               chr1:95215075-95215212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               239-406
               

               Cow position:
               chr1:37309404-37309569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               242-347
               

               Cow position:
               chr1:22153805-22153701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               242-350
               

               Cow position:
               chr1:6989262-6989154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               242-406
               

               Cow position:
               chr1:30983384-30983542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 70
               

               Conread position:
               242-407
               

               Cow position:
               chr1:61542807-61542970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               242-407
               

               Cow position:
               chr1:66430403-66430245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               242-407
               

               Cow position:
               chr1:68863143-68862980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               132, 78
               

               Conread position:
               243-348
               

               Cow position:
               chr1:55194135-55194240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-381
               

               Cow position:
               chr1:99071246-99071103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr1:6759924-6760080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr1:30189263-30189094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               96, 78
               

               Conread position:
               243-407
               

               Cow position:
               chr1:37706866-37707026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               130, 68
               

               Conread position:
               243-407
               

               Cow position:
               chr1:70435108-70434945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               130, 10
               

               Conread position:
               243-407
               

               Cow position:
               chr1:81868619-81868780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               244-375
               

               Cow position:
               chr1:88111981-88111854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               244-400
               

               Cow position:
               chr1:68845380-68845532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               126, 68
               

               Conread position:
               244-407
               

               Cow position:
               chr1:26702097-26702259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               129, 63
               

               Conread position:
               244-407
               

               Cow position:
               chr1:45288762-45288924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr1:74955911-74956073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               130, 68
               

               Conread position:
               244-407
               

               Cow position:
               chr1:77683462-77683305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr1:81228224-81228394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               245-388
               

               Cow position:
               chr1:101634821-101634680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               245-407
               

               Cow position:
               chr1:68826803-68826957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               245-426
               

               Cow position:
               chr1:39426896-39427074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               164, 128
               

               Conread position:
               246-369
               

               Cow position:
               chr1:31599033-31598910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               247-371
               

               Cow position:
               chr1:102345929-102346053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 7
               

               Conread position:
               247-384
               

               Cow position:
               chr1:89835357-89835224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               247-404
               

               Cow position:
               chr1:21561118-21560966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               247-404
               

               Cow position:
               chr1:75142103-75141948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr1:51394525-51394363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr1:64678802-64678643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr1:81355596-81355761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               247-441
               

               Cow position:
               chr1:26615968-26616160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               100, 9
               

               Conread position:
               249-381
               

               Cow position:
               chr1:51531856-51531726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               251-376
               

               Cow position:
               chr1:77265536-77265415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               251-407
               

               Cow position:
               chr1:56635201-56635043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               123, 108
               

               Conread position:
               252-407
               

               Cow position:
               chr1:42555368-42555211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               253-407
               

               Cow position:
               chr1:16855598-16855749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               253-407
               

               Cow position:
               chr1:26943409-26943255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               121, 140
               

               Conread position:
               255-407
               

               Cow position:
               chr1:43703508-43703355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               255-407
               

               Cow position:
               chr1:48444095-48444246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               136, 116
               

               Conread position:
               256-447
               

               Cow position:
               chr1:78079817-78079629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               155, 129
               

               Conread position:
               257-407
               

               Cow position:
               chr1:55146895-55146750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr1:89485673-89485524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               263-407
               

               Cow position:
               chr1:4374246-4374391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               111, 140
               

               Conread position:
               265-407
               

               Cow position:
               chr1:85597027-85596889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 66
               

               Conread position:
               265-407
               

               Cow position:
               chr1:101946625-101946762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               268-406
               

               Cow position:
               chr1:6788197-6788337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               269-407
               

               Cow position:
               chr1:98311157-98311016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               275-401
               

               Cow position:
               chr1:74832500-74832378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               279-407
               

               Cow position:
               chr1:102647198-102647324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               286-407
               

               Cow position:
               chr1:1991350-1991474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               287-420
               

               Cow position:
               chr1:99311361-99311495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               290-406
               

               Cow position:
               chr1:57639451-57639568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               72-364
               

               Cow position:
               chr10:77634-77333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               97, 184
               

               Conread position:
               72-401
               

               Cow position:
               chr10:47725185-47724874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 87
               

               Conread position:
               79-406
               

               Cow position:
               chr10:24732543-24732228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               79-407
               

               Cow position:
               chr10:24022050-24022366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               86-168
               

               Cow position:
               chr10:9959409-9959327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               73
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               86-175
               

               Cow position:
               chr10:17518654-17518743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               86-176
               

               Cow position:
               chr10:49686933-49686844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               86-330
               

               Cow position:
               chr10:57457863-57457624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               88-407
               

               Cow position:
               chr10:53405693-53405393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               89-348
               

               Cow position:
               chr10:7493349-7493624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               89-407
               

               Cow position:
               chr10:31373861-31374177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 88
               

               Conread position:
               89-407
               

               Cow position:
               chr10:52167415-52167096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               26, 151
               

               Conread position:
               89-407
               

               Cow position:
               chr10:59663749-59664059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 89
               

               Conread position:
               90-345
               

               Cow position:
               chr10:17798435-17798210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               13, 90
               

               Conread position:
               91-226
               

               Cow position:
               chr10:39109508-39109641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               95, 87
               

               Conread position:
               92-341
               

               Cow position:
               chr10:55119648-55119902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               87, 107
               

               Conread position:
               93-376
               

               Cow position:
               chr10:30455622-30455885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               204, 12
               

               Conread position:
               94-210
               

               Cow position:
               chr10:60236917-60237035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               94-310
               

               Cow position:
               chr10:18229228-18229452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               79, 172
               

               Conread position:
               94-327
               

               Cow position:
               chr10:29090370-29090607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               109, 16
               

               Conread position:
               94-407
               

               Cow position:
               chr10:10720455-10720755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               54, 96
               

               Conread position:
               95-278
               

               Cow position:
               chr10:27203556-27203369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               95-348
               

               Cow position:
               chr10:22139572-22139802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               96-228
               

               Cow position:
               chr10:50042799-50042666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               106, 82
               

               Conread position:
               96-236
               

               Cow position:
               chr10:22810854-22810998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               96-332
               

               Cow position:
               chr10:2190894-2191119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               96-407
               

               Cow position:
               chr10:15115824-15115531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               97-407
               

               Cow position:
               chr10:9083513-9083215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               235, 80
               

               Conread position:
               99-222
               

               Cow position:
               chr10:6720214-6720088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               99-363
               

               Cow position:
               chr10:34174772-34175016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               101-376
               

               Cow position:
               chr10:67260314-67260579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               271, 77
               

               Conread position:
               101-407
               

               Cow position:
               chr10:29919623-29919916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 77
               

               Conread position:
               101-407
               

               Cow position:
               chr10:69997596-69997885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               273, 28
               

               Conread position:
               101-473
               

               Cow position:
               chr10:4198180-4197828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               165, 78
               

               Conread position:
               102-407
               

               Cow position:
               chr10:41760109-41760405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               84, 23
               

               Conread position:
               105-261
               

               Cow position:
               chr10:23905601-23905444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               106-310
               

               Cow position:
               chr10:22566940-22567143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 61
               

               Conread position:
               106-322
               

               Cow position:
               chr10:31265841-31266053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 72
               

               Conread position:
               106-348
               

               Cow position:
               chr10:48500596-48500365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               106-406
               

               Cow position:
               chr10:9578756-9579047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               227, 61
               

               Conread position:
               107-407
               

               Cow position:
               chr10:22396442-22396169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               267, 49
               

               Conread position:
               109-407
               

               Cow position:
               chr10:28776563-28776268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               61, 71
               

               Conread position:
               116-212
               

               Cow position:
               chr10:31797887-31797988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               116-367
               

               Cow position:
               chr10:33371585-33371342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 62
               

               Conread position:
               116-407
               

               Cow position:
               chr10:36291033-36290748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               129, 62
               

               Conread position:
               116-407
               

               Cow position:
               chr10:52069296-52069568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 62
               

               Conread position:
               117-379
               

               Cow position:
               chr10:51222933-51223184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               139-405
               

               Cow position:
               chr10:33311295-33311555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               42, 169
               

               Conread position:
               139-407
               

               Cow position:
               chr10:61839757-61839513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               235, 39
               

               Conread position:
               141-277
               

               Cow position:
               chr10:31257311-31257437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               141-407
               

               Cow position:
               chr10:35778711-35778984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 135
               

               Conread position:
               150-407
               

               Cow position:
               chr10:54477281-54477024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 40
               

               Conread position:
               152-348
               

               Cow position:
               chr10:22119950-22120146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               156
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               154-405
               

               Cow position:
               chr10:59849590-59849334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               70, 169
               

               Conread position:
               157-350
               

               Cow position:
               chr10:8847322-8847133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               89, 5
               

               Conread position:
               157-380
               

               Cow position:
               chr10:24830920-24831139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               137, 5
               

               Conread position:
               162-367
               

               Cow position:
               chr10:17991105-17990899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               162-402
               

               Cow position:
               chr10:44421743-44421985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               162-407
               

               Cow position:
               chr10:47651462-47651214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               168-349
               

               Cow position:
               chr10:890119-889938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               168-399
               

               Cow position:
               chr10:29526747-29526970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               168-405
               

               Cow position:
               chr10:35902793-35903035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               168-407
               

               Cow position:
               chr10:22049408-22049178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               170-342
               

               Cow position:
               chr10:17448045-17448216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               170-389
               

               Cow position:
               chr10:24151731-24151950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               65, 36
               

               Conread position:
               171-351
               

               Cow position:
               chr10:23478777-23478962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               171-407
               

               Cow position:
               chr10:23912356-23912583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               25, 151
               

               Conread position:
               171-407
               

               Cow position:
               chr10:41676252-41676495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 109
               

               Conread position:
               173-376
               

               Cow position:
               chr10:31798248-31798451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               6, 73
               

               Conread position:
               179-388
               

               Cow position:
               chr10:53247861-53248064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 52
               

               Conread position:
               179-407
               

               Cow position:
               chr10:38421511-38421734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               68, 11
               

               Conread position:
               181-407
               

               Cow position:
               chr10:31791111-31791340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               186-376
               

               Cow position:
               chr10:50042740-50042557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               188-371
               

               Cow position:
               chr10:24307785-24307971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               190-357
               

               Cow position:
               chr10:35795472-35795308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               159, 16
               

               Conread position:
               190-381
               

               Cow position:
               chr10:15225101-15224908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 128
               

               Conread position:
               190-405
               

               Cow position:
               chr10:30440910-30441128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 70
               

               Conread position:
               192-327
               

               Cow position:
               chr10:668995-668863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               192-406
               

               Cow position:
               chr10:13316072-13315854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               192-407
               

               Cow position:
               chr10:49455959-49456170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               194-331
               

               Cow position:
               chr10:32986040-32986175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               132, 12
               

               Conread position:
               194-332
               

               Cow position:
               chr10:37442669-37442535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-342
               

               Cow position:
               chr10:22810926-22811075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 65
               

               Conread position:
               194-383
               

               Cow position:
               chr10:50015865-50016058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-398
               

               Cow position:
               chr10:24902851-24903062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-407
               

               Cow position:
               chr10:19098966-19098755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               194-407
               

               Cow position:
               chr10:29252298-29252083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               12, 110
               

               Conread position:
               195-387
               

               Cow position:
               chr10:22472453-22472262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               195-407
               

               Cow position:
               chr10:15293397-15293185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               196-407
               

               Cow position:
               chr10:13311858-13311649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               178, 29
               

               Conread position:
               196-407
               

               Cow position:
               chr10:56180690-56180483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               200-407
               

               Cow position:
               chr10:28429383-28429580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               201-407
               

               Cow position:
               chr10:28841080-28840870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               93, 22
               

               Conread position:
               202-404
               

               Cow position:
               chr10:59839166-59839365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               203-405
               

               Cow position:
               chr10:36896522-36896320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               123, 24
               

               Conread position:
               204-407
               

               Cow position:
               chr10:2538212-2538013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               205-349
               

               Cow position:
               chr10:52061938-52061796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               205-353
               

               Cow position:
               chr10:54548631-54548484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               20, 75
               

               Conread position:
               205-366
               

               Cow position:
               chr10:17388959-17388799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               205-406
               

               Cow position:
               chr10:67581402-67581200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               167, 30
               

               Conread position:
               205-407
               

               Cow position:
               chr10:42313023-42312821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               107, 167
               

               Conread position:
               205-407
               

               Cow position:
               chr10:47690507-47690306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               205-453
               

               Cow position:
               chr10:34430106-34430354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               208, 166
               

               Conread position:
               206-342
               

               Cow position:
               chr10:53971990-53972121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               206-354
               

               Cow position:
               chr10:37785248-37785393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               206-391
               

               Cow position:
               chr10:25699770-25699583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr10:23506373-23506573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               106, 85
               

               Conread position:
               206-407
               

               Cow position:
               chr10:24375665-24375470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               5, 96
               

               Conread position:
               207-348
               

               Cow position:
               chr10:59004465-59004324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               207-390
               

               Cow position:
               chr10:29349731-29349546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               207-407
               

               Cow position:
               chr10:24871283-24871083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               37, 165
               

               Conread position:
               208-364
               

               Cow position:
               chr10:6516812-6516658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               209-376
               

               Cow position:
               chr10:1488947-1488780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               209-407
               

               Cow position:
               chr10:4164385-4164185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               210-372
               

               Cow position:
               chr10:23127871-23128034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               210-407
               

               Cow position:
               chr10:52881506-52881702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               172, 23
               

               Conread position:
               214-407
               

               Cow position:
               chr10:47543187-47542999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               9, 118
               

               Conread position:
               216-368
               

               Cow position:
               chr10:33369890-33369744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               8, 16
               

               Conread position:
               216-378
               

               Cow position:
               chr10:13927843-13927682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               7, 140
               

               Conread position:
               216-405
               

               Cow position:
               chr10:69934671-69934854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               216-407
               

               Cow position:
               chr10:35802251-35802451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 166
               

               Conread position:
               217-399
               

               Cow position:
               chr10:33116844-33117026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               162, 83
               

               Conread position:
               218-406
               

               Cow position:
               chr10:19549382-19549568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               218-407
               

               Cow position:
               chr10:50134700-50134889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               129, 16
               

               Conread position:
               219-407
               

               Cow position:
               chr10:15868358-15868167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               219-407
               

               Cow position:
               chr10:40107206-40107022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               10, 39
               

               Conread position:
               220-407
               

               Cow position:
               chr10:24132721-24132902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               154, 10
               

               Conread position:
               221-372
               

               Cow position:
               chr10:26631511-26631361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               221-380
               

               Cow position:
               chr10:8853654-8853497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               221-383
               

               Cow position:
               chr10:34661222-34661379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               221-385
               

               Cow position:
               chr10:14093144-14093301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               221-406
               

               Cow position:
               chr10:51289352-51289169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               151, 14
               

               Conread position:
               221-406
               

               Cow position:
               chr10:51306446-51306260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 113
               

               Conread position:
               221-407
               

               Cow position:
               chr10:10137968-10137785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               222-340
               

               Cow position:
               chr10:19679200-19679082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-341
               

               Cow position:
               chr10:30787526-30787644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               222-343
               

               Cow position:
               chr10:13158216-13158094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               222-343
               

               Cow position:
               chr10:62277226-62277348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               222-353
               

               Cow position:
               chr10:59214379-59214515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               222-357
               

               Cow position:
               chr10:21515768-21515902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               222-370
               

               Cow position:
               chr10:63628290-63628143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               222-372
               

               Cow position:
               chr10:10634321-10634171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-379
               

               Cow position:
               chr10:9575946-9576102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-379
               

               Cow position:
               chr10:33195144-33194985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               222-380
               

               Cow position:
               chr10:54848880-54848725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               154, 98
               

               Conread position:
               222-383
               

               Cow position:
               chr10:32929079-32928913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               222-385
               

               Cow position:
               chr10:32080374-32080213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               157, 90
               

               Conread position:
               222-387
               

               Cow position:
               chr10:40744215-40744053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-391
               

               Cow position:
               chr10:23379236-23379067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               222-399
               

               Cow position:
               chr10:46327793-46327614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               152, 173
               

               Conread position:
               222-403
               

               Cow position:
               chr10:45371158-45370976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               165, 89
               

               Conread position:
               222-405
               

               Cow position:
               chr10:26209145-26209332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               149, 133
               

               Conread position:
               222-406
               

               Cow position:
               chr10:18042282-18042100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr10:19372234-19372419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr10:64042185-64042003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr10:6436162-6435977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr10:10148751-10148572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr10:15309300-15309485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               222-407
               

               Cow position:
               chr10:20132426-20132608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               150
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr10:30522961-30523147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               158, 25
               

               Conread position:
               222-407
               

               Cow position:
               chr10:33084339-33084519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr10:35792028-35791848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr10:36490120-36489936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               132, 10
               

               Conread position:
               222-407
               

               Cow position:
               chr10:41132365-41132184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr10:50360015-50359832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               222-407
               

               Cow position:
               chr10:52296597-52296412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               152, 96
               

               Conread position:
               222-407
               

               Cow position:
               chr10:55395874-55396060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               152, 180
               

               Conread position:
               222-407
               

               Cow position:
               chr10:59010033-59010219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               222-442
               

               Cow position:
               chr10:64285693-64285912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               152, 13
               

               Conread position:
               222-451
               

               Cow position:
               chr10:50332697-50332465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               223-345
               

               Cow position:
               chr10:58638114-58637993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               223-353
               

               Cow position:
               chr10:50050006-50049881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               223-365
               

               Cow position:
               chr10:62454268-62454410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-375
               

               Cow position:
               chr10:10153109-10152959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-376
               

               Cow position:
               chr10:30121507-30121353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               223-377
               

               Cow position:
               chr10:48316846-48316999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               223-378
               

               Cow position:
               chr10:10027672-10027521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               223-385
               

               Cow position:
               chr10:10120295-10120133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 149
               

               Conread position:
               223-387
               

               Cow position:
               chr10:30929784-30929952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               99, 12
               

               Conread position:
               223-387
               

               Cow position:
               chr10:44771751-44771593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               223-401
               

               Cow position:
               chr10:42746016-42745841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               158, 24
               

               Conread position:
               223-405
               

               Cow position:
               chr10:34674118-34673935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               150, 20
               

               Conread position:
               223-405
               

               Cow position:
               chr10:48462242-48462418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               223-405
               

               Cow position:
               chr10:55319597-55319409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               223-406
               

               Cow position:
               chr10:17568000-17568184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               87, 97
               

               Conread position:
               223-406
               

               Cow position:
               chr10:64182545-64182370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr10:2202028-2202206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               92, 17
               

               Conread position:
               223-407
               

               Cow position:
               chr10:2462378-2462568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               52, 97
               

               Conread position:
               223-407
               

               Cow position:
               chr10:4184297-4184110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               152
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr10:19895494-19895315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               158, 33
               

               Conread position:
               223-407
               

               Cow position:
               chr10:24753244-24753067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr10:24756513-24756334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr10:40738094-40737913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr10:41626694-41626511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               154, 59
               

               Conread position:
               223-407
               

               Cow position:
               chr10:42123491-42123676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr10:43509101-43508909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               86, 157
               

               Conread position:
               223-407
               

               Cow position:
               chr10:55382416-55382231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-411
               

               Cow position:
               chr10:16598789-16598596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               223-470
               

               Cow position:
               chr10:66320984-66321227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               186, 18
               

               Conread position:
               224-346
               

               Cow position:
               chr10:33462285-33462407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-361
               

               Cow position:
               chr10:2857147-2857011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               224-376
               

               Cow position:
               chr10:13586803-13586652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               224-403
               

               Cow position:
               chr10:67288391-67288213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               153, 75
               

               Conread position:
               224-407
               

               Cow position:
               chr10:12315246-12315074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               224-407
               

               Cow position:
               chr10:15871772-15871956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               95, 158
               

               Conread position:
               224-407
               

               Cow position:
               chr10:23886360-23886542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               149, 32
               

               Conread position:
               224-407
               

               Cow position:
               chr10:28670718-28670906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               148, 16
               

               Conread position:
               224-407
               

               Cow position:
               chr10:43531365-43531178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               106, 33
               

               Conread position:
               224-407
               

               Cow position:
               chr10:54948035-54948217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               72, 142
               

               Conread position:
               226-381
               

               Cow position:
               chr10:20485461-20485617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               226-382
               

               Cow position:
               chr10:17765871-17766030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               58, 92
               

               Conread position:
               226-383
               

               Cow position:
               chr10:48898764-48898606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               226-387
               

               Cow position:
               chr10:6664132-6663972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               226-406
               

               Cow position:
               chr10:51727325-51727499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr10:2449444-2449265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               150, 25
               

               Conread position:
               226-407
               

               Cow position:
               chr10:2849447-2849266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               154, 75
               

               Conread position:
               226-407
               

               Cow position:
               chr10:17176131-17175953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               42, 95
               

               Conread position:
               227-406
               

               Cow position:
               chr10:48741063-48741241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               147, 8
               

               Conread position:
               228-371
               

               Cow position:
               chr10:58285711-58285846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               228-405
               

               Cow position:
               chr10:51942885-51942710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               103, 76
               

               Conread position:
               229-407
               

               Cow position:
               chr10:12100448-12100631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               230-374
               

               Cow position:
               chr10:65133038-65132895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               230-406
               

               Cow position:
               chr10:58488301-58488132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               135, 54
               

               Conread position:
               230-407
               

               Cow position:
               chr10:22633531-22633707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               230-407
               

               Cow position:
               chr10:35715495-35715684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               230-407
               

               Cow position:
               chr10:59843814-59843996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               101, 154
               

               Conread position:
               231-369
               

               Cow position:
               chr10:39258401-39258539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               231-376
               

               Cow position:
               chr10:41115998-41115853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-376
               

               Cow position:
               chr10:58691000-58690858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               91, 44
               

               Conread position:
               231-377
               

               Cow position:
               chr10:32127861-32127710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               231-378
               

               Cow position:
               chr10:52278818-52278671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 114
               

               Conread position:
               231-381
               

               Cow position:
               chr10:17691148-17691285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               231-382
               

               Cow position:
               chr10:55122900-55122748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr10:39387546-39387395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               140, 19
               

               Conread position:
               231-383
               

               Cow position:
               chr10:50182958-50183102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 69
               

               Conread position:
               231-385
               

               Cow position:
               chr10:37426040-37426193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               231-388
               

               Cow position:
               chr10:9656429-9656588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-390
               

               Cow position:
               chr10:4311266-4311108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr10:43272951-43273108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr10:59151770-59151929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               12, 148
               

               Conread position:
               231-391
               

               Cow position:
               chr10:50533775-50533931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               231-395
               

               Cow position:
               chr10:58736872-58737025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-403
               

               Cow position:
               chr10:30369729-30369904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr10:6532065-6532237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               133, 98
               

               Conread position:
               231-405
               

               Cow position:
               chr10:42637326-42637146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr10:46934688-46934865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               231-405
               

               Cow position:
               chr10:61982480-61982306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 162
               

               Conread position:
               231-406
               

               Cow position:
               chr10:16986425-16986248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr10:31004928-31005101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               139, 44
               

               Conread position:
               231-407
               

               Cow position:
               chr10:10751897-10752071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               143, 101
               

               Conread position:
               231-407
               

               Cow position:
               chr10:13197738-13197917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr10:15425143-15424971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               151, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr10:15426988-15427149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr10:17925980-17926161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               31, 145
               

               Conread position:
               231-407
               

               Cow position:
               chr10:20372042-20372208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               231-407
               

               Cow position:
               chr10:24980924-24981098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 28
               

               Conread position:
               231-407
               

               Cow position:
               chr10:34660149-34660325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               142, 148
               

               Conread position:
               231-407
               

               Cow position:
               chr10:35862135-35862307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               231-407
               

               Cow position:
               chr10:37415883-37415705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               142, 164
               

               Conread position:
               231-407
               

               Cow position:
               chr10:39228241-39228063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               143, 164
               

               Conread position:
               231-407
               

               Cow position:
               chr10:56475562-56475384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               90, 143
               

               Conread position:
               231-429
               

               Cow position:
               chr10:25466160-25465959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-432
               

               Cow position:
               chr10:33914972-33915172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               141, 149
               

               Conread position:
               231-441
               

               Cow position:
               chr10:24276632-24276848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               81, 202
               

               Conread position:
               232-356
               

               Cow position:
               chr10:48123321-48123195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               232-372
               

               Cow position:
               chr10:35605142-35605002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-372
               

               Cow position:
               chr10:50498432-50498570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               232-388
               

               Cow position:
               chr10:31400267-31400111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               13, 140
               

               Conread position:
               232-395
               

               Cow position:
               chr10:48377306-48377467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               232-400
               

               Cow position:
               chr10:63884031-63883864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               142, 100
               

               Conread position:
               232-405
               

               Cow position:
               chr10:10043014-10043185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 44
               

               Conread position:
               232-405
               

               Cow position:
               chr10:16645097-16645269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               147, 48
               

               Conread position:
               232-407
               

               Cow position:
               chr10:1976225-1976398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               232-407
               

               Cow position:
               chr10:11009502-11009330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr10:13918167-13918335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               142, 80
               

               Conread position:
               232-407
               

               Cow position:
               chr10:17844859-17844682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr10:22341669-22341485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               102, 43
               

               Conread position:
               232-407
               

               Cow position:
               chr10:25913705-25913877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               141, 76
               

               Conread position:
               232-407
               

               Cow position:
               chr10:45378912-45379086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr10:46262273-46262106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr10:49472424-49472601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               142, 24
               

               Conread position:
               232-407
               

               Cow position:
               chr10:52113581-52113753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               41, 36
               

               Conread position:
               232-445
               

               Cow position:
               chr10:57059189-57059402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               150, 105
               

               Conread position:
               233-379
               

               Cow position:
               chr10:29091256-29091400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               233-389
               

               Cow position:
               chr10:1108371-1108529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               233-389
               

               Cow position:
               chr10:49168943-49169102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               233-390
               

               Cow position:
               chr10:37014725-37014565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               233-406
               

               Cow position:
               chr10:38430473-38430644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               233-406
               

               Cow position:
               chr10:66194213-66194386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               141, 99
               

               Conread position:
               233-406
               

               Cow position:
               chr10:68829192-68829363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               7, 28
               

               Conread position:
               233-407
               

               Cow position:
               chr10:38370364-38370541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               116, 23
               

               Conread position:
               233-407
               

               Cow position:
               chr10:47182478-47182648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr10:58935078-58935251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               140, 56
               

               Conread position:
               233-407
               

               Cow position:
               chr10:65345382-65345554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               102, 139
               

               Conread position:
               233-407
               

               Cow position:
               chr10:69216454-69216288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr10:6768633-6768791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr10:56733118-56732952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr10:60961025-60960854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               235-363
               

               Cow position:
               chr10:38322201-38322327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               52, 8
               

               Conread position:
               235-378
               

               Cow position:
               chr10:16944562-16944419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               87, 137
               

               Conread position:
               235-383
               

               Cow position:
               chr10:54699616-54699762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               65, 8
               

               Conread position:
               235-391
               

               Cow position:
               chr10:23329001-23328845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-401
               

               Cow position:
               chr10:36002287-36002120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               136, 82
               

               Conread position:
               235-405
               

               Cow position:
               chr10:53365117-53364944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               235-406
               

               Cow position:
               chr10:4109677-4109510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               235-406
               

               Cow position:
               chr10:66311299-66311129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               110, 53
               

               Conread position:
               235-407
               

               Cow position:
               chr10:721390-721217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               97, 77
               

               Conread position:
               235-407
               

               Cow position:
               chr10:3998999-3998821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr10:28038844-28039018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr10:29166362-29166201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr10:29279535-29279359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               127, 113
               

               Conread position:
               235-407
               

               Cow position:
               chr10:31528059-31527895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr10:31779179-31779353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr10:37707176-37707003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               139, 126
               

               Conread position:
               235-407
               

               Cow position:
               chr10:37708927-37709118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr10:44764407-44764590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               91, 21
               

               Conread position:
               235-407
               

               Cow position:
               chr10:52046960-52046781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               236-406
               

               Cow position:
               chr10:17553266-17553101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               166, 26
               

               Conread position:
               236-407
               

               Cow position:
               chr10:5543162-5543330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr10:16683718-16683893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr10:32417441-32417271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               87, 14
               

               Conread position:
               236-441
               

               Cow position:
               chr10:49846863-49846660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               173, 135
               

               Conread position:
               237-407
               

               Cow position:
               chr10:17073277-17073447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               237-407
               

               Cow position:
               chr10:49045926-49045761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               137, 74
               

               Conread position:
               238-407
               

               Cow position:
               chr10:46184826-46184662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               150, 74
               

               Conread position:
               238-449
               

               Cow position:
               chr10:1749671-1749461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               135, 83
               

               Conread position:
               239-407
               

               Cow position:
               chr10:65423819-65423981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               240-377
               

               Cow position:
               chr10:34700715-34700579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               240-407
               

               Cow position:
               chr10:47412022-47412187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               140, 72
               

               Conread position:
               242-382
               

               Cow position:
               chr10:1195796-1195934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               130, 19
               

               Conread position:
               242-383
               

               Cow position:
               chr10:704913-705053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               242-405
               

               Cow position:
               chr10:20997205-20997366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               28, 32
               

               Conread position:
               242-407
               

               Cow position:
               chr10:28104997-28105165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               242-407
               

               Cow position:
               chr10:33732790-33732950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               128, 45
               

               Conread position:
               243-357
               

               Cow position:
               chr10:38223477-38223591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-386
               

               Cow position:
               chr10:41408356-41408215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 15
               

               Conread position:
               243-405
               

               Cow position:
               chr10:10026431-10026273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               243-406
               

               Cow position:
               chr10:22321604-22321439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr10:11221784-11221620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               133, 100
               

               Conread position:
               243-407
               

               Cow position:
               chr10:16093291-16093128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               130, 67
               

               Conread position:
               243-407
               

               Cow position:
               chr10:19539741-19539904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr10:60237014-60237176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               144, 59
               

               Conread position:
               243-407
               

               Cow position:
               chr10:62286638-62286471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               243-447
               

               Cow position:
               chr10:42230874-42230668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               131, 189
               

               Conread position:
               244-400
               

               Cow position:
               chr10:12486343-12486186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               132, 45
               

               Conread position:
               244-407
               

               Cow position:
               chr10:43438949-43438792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               139, 18
               

               Conread position:
               245-383
               

               Cow position:
               chr10:53934673-53934801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               245-407
               

               Cow position:
               chr10:23936556-23936400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               246-407
               

               Cow position:
               chr10:533610-533447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr10:32834898-32834737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 42
               

               Conread position:
               247-407
               

               Cow position:
               chr10:46492917-46493080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               247-427
               

               Cow position:
               chr10:40420769-40420946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               5, 53
               

               Conread position:
               249-406
               

               Cow position:
               chr10:27716766-27716922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               133, 9
               

               Conread position:
               250-378
               

               Cow position:
               chr10:13578288-13578160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               250-407
               

               Cow position:
               chr10:39586783-39586949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               98, 59
               

               Conread position:
               251-387
               

               Cow position:
               chr10:60962494-60962356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               251-403
               

               Cow position:
               chr10:48282478-48282633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               254-397
               

               Cow position:
               chr10:24560917-24561060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               130, 117
               

               Conread position:
               255-407
               

               Cow position:
               chr10:35887327-35887486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 45
               

               Conread position:
               256-387
               

               Cow position:
               chr10:13404493-13404618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               257-402
               

               Cow position:
               chr10:9526037-9526178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               258-404
               

               Cow position:
               chr10:28623623-28623477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               261-387
               

               Cow position:
               chr10:21462306-21462185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr10:28152315-28152462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               112, 142
               

               Conread position:
               261-407
               

               Cow position:
               chr10:29588776-29588921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               262-400
               

               Cow position:
               chr10:22360044-22360181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               262-407
               

               Cow position:
               chr10:49038647-49038497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 47
               

               Conread position:
               264-407
               

               Cow position:
               chr10:41254513-41254652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               117, 48
               

               Conread position:
               271-407
               

               Cow position:
               chr10:9288099-9287970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               272-407
               

               Cow position:
               chr10:35653723-35653587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               279-407
               

               Cow position:
               chr10:39303801-39303933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               284-407
               

               Cow position:
               chr10:48178397-48178271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               48-184
               

               Cow position:
               chr11:15382260-15382393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               53-423
               

               Cow position:
               chr11:17515718-17515346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               317, 346
               

               Conread position:
               55-238
               

               Cow position:
               chr11:73983760-73983938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               81-203
               

               Cow position:
               chr11:63640652-63640774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               5, 26
               

               Conread position:
               83-192
               

               Cow position:
               chr11:47784983-47784875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 96
               

               Conread position:
               83-236
               

               Cow position:
               chr11:46784665-46784515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               83-295
               

               Cow position:
               chr11:17991429-17991216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               20, 138
               

               Conread position:
               85-229
               

               Cow position:
               chr11:53130961-53130823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               85-330
               

               Cow position:
               chr11:56895732-56895974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               94, 101
               

               Conread position:
               86-183
               

               Cow position:
               chr11:28078688-28078592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               86-235
               

               Cow position:
               chr11:62729125-62728971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               86-407
               

               Cow position:
               chr11:48272442-48272121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 8
               

               Conread position:
               87-203
               

               Cow position:
               chr11:3283238-3283122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 18
               

               Conread position:
               87-249
               

               Cow position:
               chr11:69294942-69295114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               87-367
               

               Cow position:
               chr11:58173866-58173589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               119, 29
               

               Conread position:
               88-332
               

               Cow position:
               chr11:61178587-61178356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               89-280
               

               Cow position:
               chr11:41451779-41451970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               12, 93
               

               Conread position:
               89-383
               

               Cow position:
               chr11:3234335-3234023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               89-405
               

               Cow position:
               chr11:79018819-79019135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 32
               

               Conread position:
               89-407
               

               Cow position:
               chr11:30879915-30879601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               79, 123
               

               Conread position:
               89-407
               

               Cow position:
               chr11:59702715-59702408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               12, 93
               

               Conread position:
               90-367
               

               Cow position:
               chr11:58938521-58938781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               90-407
               

               Cow position:
               chr11:23137833-23138135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               239
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               172, 11
               

               Conread position:
               91-221
               

               Cow position:
               chr11:8419735-8419865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 88
               

               Conread position:
               92-445
               

               Cow position:
               chr11:53512319-53511970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               93-404
               

               Cow position:
               chr11:62778679-62778373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               68, 93
               

               Conread position:
               94-391
               

               Cow position:
               chr11:62609830-62609548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               94-406
               

               Cow position:
               chr11:36849148-36848852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 84
               

               Conread position:
               94-407
               

               Cow position:
               chr11:14466265-14466565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               280, 100
               

               Conread position:
               94-407
               

               Cow position:
               chr11:69119511-69119215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               273, 84
               

               Conread position:
               95-302
               

               Cow position:
               chr11:80601143-80600946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               95-310
               

               Cow position:
               chr11:34623404-34623191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 83
               

               Conread position:
               95-407
               

               Cow position:
               chr11:26845380-26845671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               296, 10
               

               Conread position:
               95-407
               

               Cow position:
               chr11:33311199-33310896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 83
               

               Conread position:
               96-229
               

               Cow position:
               chr11:16796695-16796565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               96-404
               

               Cow position:
               chr11:64351577-64351867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               96-407
               

               Cow position:
               chr11:43430251-43430533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               286, 21
               

               Conread position:
               97-379
               

               Cow position:
               chr11:30888070-30888330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               198, 40
               

               Conread position:
               97-424
               

               Cow position:
               chr11:15073083-15072763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               64, 88
               

               Conread position:
               98-182
               

               Cow position:
               chr11:58186059-58185976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               76
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               101-219
               

               Cow position:
               chr11:48932405-48932524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               85, 77
               

               Conread position:
               101-292
               

               Cow position:
               chr11:55243379-55243559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               101-331
               

               Cow position:
               chr11:37982364-37982578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               101-380
               

               Cow position:
               chr11:83578962-83579224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               101-407
               

               Cow position:
               chr11:4652763-4653054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 70
               

               Conread position:
               106-275
               

               Cow position:
               chr11:63550034-63549873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               106-328
               

               Cow position:
               chr11:42067269-42067056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               100, 28
               

               Conread position:
               106-399
               

               Cow position:
               chr11:10363169-10363457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               264, 64
               

               Conread position:
               106-407
               

               Cow position:
               chr11:37118955-37118630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               56, 27
               

               Conread position:
               108-407
               

               Cow position:
               chr11:30597212-30596911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               110, 31
               

               Conread position:
               111-402
               

               Cow position:
               chr11:73924358-73924633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               133, 22
               

               Conread position:
               116-351
               

               Cow position:
               chr11:68975357-68975124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               90, 198
               

               Conread position:
               116-403
               

               Cow position:
               chr11:64867824-64868087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               217, 18
               

               Conread position:
               116-407
               

               Cow position:
               chr11:61958525-61958821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 146
               

               Conread position:
               118-389
               

               Cow position:
               chr11:27765368-27765097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               50, 105
               

               Conread position:
               122-404
               

               Cow position:
               chr11:63433842-63434129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 150
               

               Conread position:
               126-399
               

               Cow position:
               chr11:62150697-62150961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               248, 52
               

               Conread position:
               131-447
               

               Cow position:
               chr11:29946708-29947031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               46, 20
               

               Conread position:
               139-298
               

               Cow position:
               chr11:62965068-62965230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               57, 39
               

               Conread position:
               147-407
               

               Cow position:
               chr11:36658637-36658897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               149-372
               

               Cow position:
               chr11:71345135-71345365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 85
               

               Conread position:
               155-405
               

               Cow position:
               chr11:41293644-41293892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               41, 7
               

               Conread position:
               159-351
               

               Cow position:
               chr11:17517569-17517378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               30, 14
               

               Conread position:
               161-296
               

               Cow position:
               chr11:36128570-36128439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               161-373
               

               Cow position:
               chr11:56654727-56654513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               75, 28
               

               Conread position:
               161-386
               

               Cow position:
               chr11:61454348-61454568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               36, 13
               

               Conread position:
               161-407
               

               Cow position:
               chr11:66518649-66518413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               210, 18
               

               Conread position:
               162-345
               

               Cow position:
               chr11:65842909-65843088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               162-407
               

               Cow position:
               chr11:5789736-5789967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               165-383
               

               Cow position:
               chr11:34693024-34692800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               166-347
               

               Cow position:
               chr11:70517427-70517610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               25, 5
               

               Conread position:
               168-385
               

               Cow position:
               chr11:28644256-28644034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               169-372
               

               Cow position:
               chr11:29983557-29983758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               171-376
               

               Cow position:
               chr11:35669795-35669997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               171-402
               

               Cow position:
               chr11:47837483-47837246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               25, 40
               

               Conread position:
               171-403
               

               Cow position:
               chr11:34963230-34962992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 8
               

               Conread position:
               171-405
               

               Cow position:
               chr11:51195926-51196153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               203, 19
               

               Conread position:
               171-405
               

               Cow position:
               chr11:51729445-51729213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               171-405
               

               Cow position:
               chr11:83926202-83925976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               52, 28
               

               Conread position:
               171-407
               

               Cow position:
               chr11:33348026-33348260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               63, 85
               

               Conread position:
               175-407
               

               Cow position:
               chr11:26535941-26535700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               182-379
               

               Cow position:
               chr11:33697784-33697594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               183-407
               

               Cow position:
               chr11:67246937-67246716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               187-406
               

               Cow position:
               chr11:34032057-34032277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               188-402
               

               Cow position:
               chr11:70277970-70278179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               190-353
               

               Cow position:
               chr11:35363622-35363459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               192-370
               

               Cow position:
               chr11:18587461-18587635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               192-390
               

               Cow position:
               chr11:77128804-77128600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               193-351
               

               Cow position:
               chr11:84775213-84775054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               10, 66
               

               Conread position:
               194-343
               

               Cow position:
               chr11:70709927-70709771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-377
               

               Cow position:
               chr11:4429997-4430179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               194-384
               

               Cow position:
               chr11:6633844-6633657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               194-399
               

               Cow position:
               chr11:69076049-69075840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               13, 140
               

               Conread position:
               194-406
               

               Cow position:
               chr11:63917343-63917548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               130, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr11:70826086-70825874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               12, 178
               

               Conread position:
               195-332
               

               Cow position:
               chr11:4436884-4436746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-382
               

               Cow position:
               chr11:56290648-56290461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               11, 177
               

               Conread position:
               195-404
               

               Cow position:
               chr11:35213031-35213243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               195-406
               

               Cow position:
               chr11:22747195-22747405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               195-407
               

               Cow position:
               chr11:40478715-40478926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               11, 182
               

               Conread position:
               195-407
               

               Cow position:
               chr11:40573202-40573409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               187, 25
               

               Conread position:
               196-405
               

               Cow position:
               chr11:83033106-83033311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               178, 10
               

               Conread position:
               196-407
               

               Cow position:
               chr11:16906915-16907120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               197-403
               

               Cow position:
               chr11:17831090-17831293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               197-457
               

               Cow position:
               chr11:3283158-3282907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               9, 116
               

               Conread position:
               198-332
               

               Cow position:
               chr11:35860713-35860581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               198-383
               

               Cow position:
               chr11:62754180-62754372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               198-407
               

               Cow position:
               chr11:36238908-36238707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               200-383
               

               Cow position:
               chr11:48650104-48649919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               201-390
               

               Cow position:
               chr11:63909538-63909722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               5, 20
               

               Conread position:
               202-369
               

               Cow position:
               chr11:5249398-5249565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 100
               

               Conread position:
               202-405
               

               Cow position:
               chr11:7924465-7924665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               169, 92
               

               Conread position:
               204-407
               

               Cow position:
               chr11:4207435-4207235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               205-345
               

               Cow position:
               chr11:41983044-41983181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               205-371
               

               Cow position:
               chr11:71111015-71110851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               205-372
               

               Cow position:
               chr11:37778701-37778872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               205-386
               

               Cow position:
               chr11:44017100-44016919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-386
               

               Cow position:
               chr11:82730870-82731054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               205-387
               

               Cow position:
               chr11:84498829-84499007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               169, 82
               

               Conread position:
               205-405
               

               Cow position:
               chr11:73512320-73512511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr11:34144799-34144991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               186, 94
               

               Conread position:
               205-407
               

               Cow position:
               chr11:63919928-63920125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr11:72375550-72375762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               206-357
               

               Cow position:
               chr11:3797842-3797691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               206-407
               

               Cow position:
               chr11:12111338-12111530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               166, 18
               

               Conread position:
               206-407
               

               Cow position:
               chr11:21508128-21507927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               207-353
               

               Cow position:
               chr11:47784898-47784752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-407
               

               Cow position:
               chr11:55761989-55761794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               208-383
               

               Cow position:
               chr11:46953070-46952896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               208-407
               

               Cow position:
               chr11:32436455-32436255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               162, 27
               

               Conread position:
               209-377
               

               Cow position:
               chr11:18086226-18086386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               209-458
               

               Cow position:
               chr11:35573370-35573617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               200, 108
               

               Conread position:
               210-370
               

               Cow position:
               chr11:30272819-30272970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               210-407
               

               Cow position:
               chr11:2084262-2084065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               164, 21
               

               Conread position:
               211-406
               

               Cow position:
               chr11:7460493-7460690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 49
               

               Conread position:
               212-406
               

               Cow position:
               chr11:31875209-31875015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               215-331
               

               Cow position:
               chr11:46499125-46499010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               215-352
               

               Cow position:
               chr11:80586390-80586252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               215-362
               

               Cow position:
               chr11:63382073-63382222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               216-378
               

               Cow position:
               chr11:5219047-5219206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-380
               

               Cow position:
               chr11:17990131-17990287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               78, 8
               

               Conread position:
               216-404
               

               Cow position:
               chr11:77118814-77118638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 42
               

               Conread position:
               216-405
               

               Cow position:
               chr11:80761263-80761453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               32, 42
               

               Conread position:
               216-407
               

               Cow position:
               chr11:35536702-35536511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               7, 92
               

               Conread position:
               218-380
               

               Cow position:
               chr11:63485050-63484897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               218-397
               

               Cow position:
               chr11:83043249-83043430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               218-406
               

               Cow position:
               chr11:76114755-76114576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               218-407
               

               Cow position:
               chr11:68904962-68905151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               6, 32
               

               Conread position:
               219-371
               

               Cow position:
               chr11:27913396-27913244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               219-391
               

               Cow position:
               chr11:71934845-71935015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               30, 23
               

               Conread position:
               219-407
               

               Cow position:
               chr11:70978625-70978807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               222-337
               

               Cow position:
               chr11:59916254-59916140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 9
               

               Conread position:
               222-343
               

               Cow position:
               chr11:30805026-30805145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               222-345
               

               Cow position:
               chr11:77241813-77241692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               222-348
               

               Cow position:
               chr11:18791958-18792085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               222-349
               

               Cow position:
               chr11:66099754-66099881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-370
               

               Cow position:
               chr11:46427299-46427447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               222-376
               

               Cow position:
               chr11:29786388-29786544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               222-376
               

               Cow position:
               chr11:84977250-84977405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               222-380
               

               Cow position:
               chr11:1067331-1067489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-383
               

               Cow position:
               chr11:65826642-65826802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-387
               

               Cow position:
               chr11:17227536-17227698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-387
               

               Cow position:
               chr11:30867292-30867128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               222-387
               

               Cow position:
               chr11:41809384-41809547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-388
               

               Cow position:
               chr11:82289687-82289524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               152, 86
               

               Conread position:
               222-389
               

               Cow position:
               chr11:66041387-66041226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               222-390
               

               Cow position:
               chr11:30209712-30209884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               222-390
               

               Cow position:
               chr11:46746747-46746571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               222-396
               

               Cow position:
               chr11:62620485-62620309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               145, 173
               

               Conread position:
               222-401
               

               Cow position:
               chr11:33753803-33753974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               222-401
               

               Cow position:
               chr11:57608354-57608527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               160, 25
               

               Conread position:
               222-402
               

               Cow position:
               chr11:62812841-62813024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               222-405
               

               Cow position:
               chr11:6233771-6233954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               164, 149
               

               Conread position:
               222-405
               

               Cow position:
               chr11:30370213-30370033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               222-407
               

               Cow position:
               chr11:259065-259249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               169, 18
               

               Conread position:
               222-407
               

               Cow position:
               chr11:1070982-1071169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               142, 173
               

               Conread position:
               222-407
               

               Cow position:
               chr11:13043037-13043222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr11:17493591-17493400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               222-407
               

               Cow position:
               chr11:31410769-31410960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr11:34646698-34646511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               145, 173
               

               Conread position:
               222-407
               

               Cow position:
               chr11:38577670-38577849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr11:44032120-44031925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr11:47004454-47004268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               222-407
               

               Cow position:
               chr11:48296139-48295956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               158, 89
               

               Conread position:
               222-407
               

               Cow position:
               chr11:54334437-54334257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr11:63482322-63482502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               222-407
               

               Cow position:
               chr11:63847953-63847772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr11:67312889-67312694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               222-418
               

               Cow position:
               chr11:82107793-82107981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               222-426
               

               Cow position:
               chr11:38236360-38236155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               171, 152
               

               Conread position:
               222-441
               

               Cow position:
               chr11:80530465-80530259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               187, 11
               

               Conread position:
               223-344
               

               Cow position:
               chr11:49396418-49396539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-345
               

               Cow position:
               chr11:47585955-47586073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               223-363
               

               Cow position:
               chr11:62168224-62168363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               223-364
               

               Cow position:
               chr11:69415491-69415630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               54, 46
               

               Conread position:
               223-364
               

               Cow position:
               chr11:69417509-69417370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               54, 46
               

               Conread position:
               223-375
               

               Cow position:
               chr11:55052979-55052826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               223-376
               

               Cow position:
               chr11:48660042-48659888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-386
               

               Cow position:
               chr11:39854910-39855072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               149, 89
               

               Conread position:
               223-390
               

               Cow position:
               chr11:32690863-32691031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               223-390
               

               Cow position:
               chr11:67615139-67615308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               144, 83
               

               Conread position:
               223-398
               

               Cow position:
               chr11:61137067-61137243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               223-399
               

               Cow position:
               chr11:69307621-69307442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               223-405
               

               Cow position:
               chr11:8670123-8669933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr11:3393102-3393288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               151, 61
               

               Conread position:
               223-407
               

               Cow position:
               chr11:13592843-13592660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr11:17676265-17676447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr11:19591887-19592067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               223-407
               

               Cow position:
               chr11:25620283-25620476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               93, 179
               

               Conread position:
               223-407
               

               Cow position:
               chr11:52690414-52690598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               151, 33
               

               Conread position:
               223-407
               

               Cow position:
               chr11:63435628-63435441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               151
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               149, 88
               

               Conread position:
               223-407
               

               Cow position:
               chr11:64029161-64029338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr11:65607581-65607767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               114, 158
               

               Conread position:
               223-407
               

               Cow position:
               chr11:67804850-67804677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr11:71807459-71807647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               73, 114
               

               Conread position:
               223-407
               

               Cow position:
               chr11:72871013-72870824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 158
               

               Conread position:
               223-407
               

               Cow position:
               chr11:84385531-84385712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               223-441
               

               Cow position:
               chr11:78380957-78381164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               224-391
               

               Cow position:
               chr11:15369494-15369326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               224-404
               

               Cow position:
               chr11:21844032-21844208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               149, 51
               

               Conread position:
               224-404
               

               Cow position:
               chr11:77319521-77319339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               224-406
               

               Cow position:
               chr11:37804449-37804631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               150, 7
               

               Conread position:
               224-407
               

               Cow position:
               chr11:11125769-11125586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               150, 29
               

               Conread position:
               224-407
               

               Cow position:
               chr11:43360678-43360859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               148, 19
               

               Conread position:
               224-407
               

               Cow position:
               chr11:48474810-48474627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr11:50152704-50152892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 174
               

               Conread position:
               224-437
               

               Cow position:
               chr11:87155626-87155412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               150, 102
               

               Conread position:
               225-403
               

               Cow position:
               chr11:59873033-59872859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 10
               

               Conread position:
               225-407
               

               Cow position:
               chr11:19586565-19586378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               225-407
               

               Cow position:
               chr11:49153054-49152875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               226-340
               

               Cow position:
               chr11:9836352-9836466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr11:76606777-76606599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               227-389
               

               Cow position:
               chr11:1362364-1362524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               228-407
               

               Cow position:
               chr11:9221629-9221804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               146, 103
               

               Conread position:
               228-407
               

               Cow position:
               chr11:63998989-63999166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               146, 111
               

               Conread position:
               228-407
               

               Cow position:
               chr11:73353958-73354130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               229-406
               

               Cow position:
               chr11:16540964-16540786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               230-341
               

               Cow position:
               chr11:8106166-8106058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               230-345
               

               Cow position:
               chr11:63517209-63517097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               230-406
               

               Cow position:
               chr11:8147797-8147974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               10, 132
               

               Conread position:
               230-407
               

               Cow position:
               chr11:42359220-42359036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               231-332
               

               Cow position:
               chr11:70600729-70600830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-335
               

               Cow position:
               chr11:60720356-60720460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-342
               

               Cow position:
               chr11:30320905-30320791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-345
               

               Cow position:
               chr11:62808407-62808520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               231-346
               

               Cow position:
               chr11:15366873-15366988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-347
               

               Cow position:
               chr11:77208173-77208058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               231-348
               

               Cow position:
               chr11:29482336-29482453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-351
               

               Cow position:
               chr11:9698998-9698882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               231-351
               

               Cow position:
               chr11:46884473-46884353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-359
               

               Cow position:
               chr11:43914391-43914263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-368
               

               Cow position:
               chr11:53717707-53717844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-370
               

               Cow position:
               chr11:18543411-18543545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr11:15373939-15373797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               231-372
               

               Cow position:
               chr11:28078593-28078462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               231-374
               

               Cow position:
               chr11:18508931-18509075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               231-377
               

               Cow position:
               chr11:3714920-3714778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               143, 101
               

               Conread position:
               231-377
               

               Cow position:
               chr11:17321749-17321601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               231-379
               

               Cow position:
               chr11:81762967-81762815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               37, 108
               

               Conread position:
               231-380
               

               Cow position:
               chr11:30925254-30925108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               231-381
               

               Cow position:
               chr11:62155738-62155588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-382
               

               Cow position:
               chr11:62889794-62889945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr11:7874238-7874085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               5, 27
               

               Conread position:
               231-383
               

               Cow position:
               chr11:34136340-34136190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               231-383
               

               Cow position:
               chr11:62742546-62742695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr11:81931017-81931163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-385
               

               Cow position:
               chr11:53147432-53147585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 88
               

               Conread position:
               231-388
               

               Cow position:
               chr11:1380775-1380615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-391
               

               Cow position:
               chr11:69168686-69168525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-402
               

               Cow position:
               chr11:26143996-26144168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               132, 149
               

               Conread position:
               231-403
               

               Cow position:
               chr11:23407564-23407389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               134, 165
               

               Conread position:
               231-403
               

               Cow position:
               chr11:36799208-36799374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               231-403
               

               Cow position:
               chr11:71492762-71492927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr11:33414336-33414163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr11:39462723-39462547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr11:53510403-53510577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               142, 83
               

               Conread position:
               231-407
               

               Cow position:
               chr11:41279-41098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               62, 108
               

               Conread position:
               231-407
               

               Cow position:
               chr11:4199370-4199196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr11:6202543-6202370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 141
               

               Conread position:
               231-407
               

               Cow position:
               chr11:8988132-8988303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr11:15772614-15772791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               150, 101
               

               Conread position:
               231-407
               

               Cow position:
               chr11:17278576-17278742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr11:19946529-19946358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               145, 21
               

               Conread position:
               231-407
               

               Cow position:
               chr11:22977775-22977947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr11:27565430-27565259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr11:27747023-27746849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr11:30355158-30354981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr11:33345545-33345367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr11:35684401-35684571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr11:35926810-35926983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               143, 30
               

               Conread position:
               231-407
               

               Cow position:
               chr11:40459208-40459035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 145
               

               Conread position:
               231-407
               

               Cow position:
               chr11:41603587-41603766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               139, 37
               

               Conread position:
               231-407
               

               Cow position:
               chr11:42296520-42296694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr11:55744567-55744395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr11:58990591-58990427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr11:70756578-70756405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               14, 97
               

               Conread position:
               231-407
               

               Cow position:
               chr11:71341365-71341542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               151, 140
               

               Conread position:
               231-407
               

               Cow position:
               chr11:77705850-77705679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               146, 51
               

               Conread position:
               231-407
               

               Cow position:
               chr11:82940525-82940698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               231-407
               

               Cow position:
               chr11:83230301-83230473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               231-445
               

               Cow position:
               chr11:71009224-71009025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 36
               

               Conread position:
               232-341
               

               Cow position:
               chr11:41980106-41980215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-351
               

               Cow position:
               chr11:15682881-15683000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-358
               

               Cow position:
               chr11:45350413-45350539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-361
               

               Cow position:
               chr11:30894905-30895034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-396
               

               Cow position:
               chr11:30638851-30639013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               232-401
               

               Cow position:
               chr11:4662949-4663116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               232-406
               

               Cow position:
               chr11:20602325-20602147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               130, 52
               

               Conread position:
               232-407
               

               Cow position:
               chr11:3740052-3739876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               152, 139
               

               Conread position:
               232-407
               

               Cow position:
               chr11:8544919-8545089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               232-407
               

               Cow position:
               chr11:8840657-8840822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr11:64101870-64101706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr11:70086431-70086252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               142, 56
               

               Conread position:
               233-340
               

               Cow position:
               chr11:46452233-46452126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-350
               

               Cow position:
               chr11:42056204-42056087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-400
               

               Cow position:
               chr11:63202151-63202319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               233-401
               

               Cow position:
               chr11:67912054-67912223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               233-406
               

               Cow position:
               chr11:17889631-17889801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               37, 41
               

               Conread position:
               233-406
               

               Cow position:
               chr11:19247102-19247275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               141, 84
               

               Conread position:
               233-406
               

               Cow position:
               chr11:37918953-37919120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               233-406
               

               Cow position:
               chr11:68913239-68913067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               10, 139
               

               Conread position:
               233-407
               

               Cow position:
               chr11:7590286-7590117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr11:18572898-18572725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr11:26483803-26483638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr11:41985948-41986120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr11:46999076-46998908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               99, 87
               

               Conread position:
               233-407
               

               Cow position:
               chr11:50472414-50472241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               149, 108
               

               Conread position:
               233-458
               

               Cow position:
               chr11:30808496-30808729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               144, 204
               

               Conread position:
               234-407
               

               Cow position:
               chr11:5217365-5217543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               234-407
               

               Cow position:
               chr11:23232423-23232592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               93, 53
               

               Conread position:
               234-441
               

               Cow position:
               chr11:63065750-63065550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               39, 100
               

               Conread position:
               235-373
               

               Cow position:
               chr11:45849402-45849542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               235-377
               

               Cow position:
               chr11:7307729-7307584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               235-380
               

               Cow position:
               chr11:21910531-21910675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-381
               

               Cow position:
               chr11:16934555-16934707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               235-382
               

               Cow position:
               chr11:16320380-16320236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               8, 57
               

               Conread position:
               235-386
               

               Cow position:
               chr11:39250067-39249918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               235-388
               

               Cow position:
               chr11:29659655-29659502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-393
               

               Cow position:
               chr11:13500111-13499953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               139, 102
               

               Conread position:
               235-393
               

               Cow position:
               chr11:22499271-22499428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               135, 77
               

               Conread position:
               235-402
               

               Cow position:
               chr11:49149145-49148967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               235-406
               

               Cow position:
               chr11:66188222-66188398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               140, 21
               

               Conread position:
               235-407
               

               Cow position:
               chr11:377546-377720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr11:5031680-5031850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr11:9270631-9270802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               141, 26
               

               Conread position:
               235-407
               

               Cow position:
               chr11:31506945-31506768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr11:41313561-41313733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               145, 136
               

               Conread position:
               235-407
               

               Cow position:
               chr11:56821146-56821327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr11:58588441-58588270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               8, 57
               

               Conread position:
               235-407
               

               Cow position:
               chr11:70206414-70206245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr11:80412918-80413088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               91, 137
               

               Conread position:
               235-408
               

               Cow position:
               chr11:36920479-36920657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               235-421
               

               Cow position:
               chr11:64048499-64048315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               235-432
               

               Cow position:
               chr11:18785782-18785975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               139, 67
               

               Conread position:
               235-441
               

               Cow position:
               chr11:56734725-56734520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               235-442
               

               Cow position:
               chr11:30211001-30210794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 109
               

               Conread position:
               236-352
               

               Cow position:
               chr11:32782789-32782905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr11:84890623-84890797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               138, 53
               

               Conread position:
               237-372
               

               Cow position:
               chr11:80616329-80616202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               237-403
               

               Cow position:
               chr11:42043902-42044066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               6, 25
               

               Conread position:
               237-405
               

               Cow position:
               chr11:42083562-42083397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               144, 83
               

               Conread position:
               237-407
               

               Cow position:
               chr11:18698973-18698801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               237-407
               

               Cow position:
               chr11:32398729-32398560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               143, 34
               

               Conread position:
               237-407
               

               Cow position:
               chr11:36112513-36112349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               237-407
               

               Cow position:
               chr11:53778710-53778539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               141
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               238-369
               

               Cow position:
               chr11:61130574-61130703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               238-405
               

               Cow position:
               chr11:39118850-39118678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               239-405
               

               Cow position:
               chr11:36987041-36986881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               239-406
               

               Cow position:
               chr11:33527144-33526977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               58, 133
               

               Conread position:
               242-407
               

               Cow position:
               chr11:64638437-64638605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               132, 78
               

               Conread position:
               242-441
               

               Cow position:
               chr11:49934642-49934846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               131, 192
               

               Conread position:
               243-377
               

               Cow position:
               chr11:77013868-77013738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               243-383
               

               Cow position:
               chr11:21438296-21438156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-389
               

               Cow position:
               chr11:48512251-48512110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               243-399
               

               Cow position:
               chr11:63469963-63469806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               243-399
               

               Cow position:
               chr11:83032768-83032613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               243-405
               

               Cow position:
               chr11:48306259-48306421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               131, 136
               

               Conread position:
               243-405
               

               Cow position:
               chr11:55333997-55333837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               243-406
               

               Cow position:
               chr11:34829698-34829857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               131, 65
               

               Conread position:
               243-407
               

               Cow position:
               chr11:28993652-28993808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               244-359
               

               Cow position:
               chr11:2900634-2900749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               244-369
               

               Cow position:
               chr11:18608151-18608276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               244-382
               

               Cow position:
               chr11:50073024-50072887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               244-390
               

               Cow position:
               chr11:38639198-38639050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               132, 104
               

               Conread position:
               244-397
               

               Cow position:
               chr11:53553302-53553157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               244-404
               

               Cow position:
               chr11:8428598-8428437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               244-408
               

               Cow position:
               chr11:45897963-45898130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               83, 131
               

               Conread position:
               244-442
               

               Cow position:
               chr11:7414789-7414982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               159, 76
               

               Conread position:
               245-376
               

               Cow position:
               chr11:58400334-58400207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               245-381
               

               Cow position:
               chr11:34106584-34106722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               245-406
               

               Cow position:
               chr11:63687534-63687691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               245-407
               

               Cow position:
               chr11:67600870-67600706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               246-406
               

               Cow position:
               chr11:77546499-77546342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr11:42066948-42066782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 100
               

               Conread position:
               251-402
               

               Cow position:
               chr11:13040092-13040238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               251-407
               

               Cow position:
               chr11:52983755-52983600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               253-400
               

               Cow position:
               chr11:75874677-75874827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               254-398
               

               Cow position:
               chr11:71482456-71482311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               254-407
               

               Cow position:
               chr11:55203383-55203536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               130, 139
               

               Conread position:
               255-407
               

               Cow position:
               chr11:75965576-75965726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               258-407
               

               Cow position:
               chr11:49231946-49231797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               121, 135
               

               Conread position:
               262-407
               

               Cow position:
               chr11:41175880-41176026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               262-407
               

               Cow position:
               chr11:70273375-70273229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               266-405
               

               Cow position:
               chr11:5075163-5075302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               115, 125
               

               Conread position:
               269-407
               

               Cow position:
               chr11:61858841-61858979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               104, 110
               

               Conread position:
               275-407
               

               Cow position:
               chr11:18340985-18341117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               99, 58
               

               Conread position:
               294-406
               

               Cow position:
               chr11:27386302-27386417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               300-406
               

               Cow position:
               chr11:10076799-10076692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               300-407
               

               Cow position:
               chr11:21427962-21428069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 71
               

               Conread position:
               75-322
               

               Cow position:
               chr12:26962390-26962646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               105, 59
               

               Conread position:
               79-182
               

               Cow position:
               chr12:38774062-38774163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               83-183
               

               Cow position:
               chr12:46101577-46101676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               83-331
               

               Cow position:
               chr12:23912798-23913032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               84-406
               

               Cow position:
               chr12:17775028-17774697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 181
               

               Conread position:
               86-353
               

               Cow position:
               chr12:2661189-2661457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               16, 89
               

               Conread position:
               86-366
               

               Cow position:
               chr12:7920482-7920186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               92, 53
               

               Conread position:
               86-369
               

               Cow position:
               chr12:22894380-22894112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               87-344
               

               Cow position:
               chr12:25436302-25436046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               99, 91
               

               Conread position:
               88-370
               

               Cow position:
               chr12:32419168-32419431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               89-183
               

               Cow position:
               chr12:19664146-19664240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               79
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               89-268
               

               Cow position:
               chr12:5135853-5135688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               89-372
               

               Cow position:
               chr12:20284351-20284053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 122
               

               Conread position:
               92-201
               

               Cow position:
               chr12:30919604-30919499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               94-350
               

               Cow position:
               chr12:23908070-23908318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               21, 94
               

               Conread position:
               94-407
               

               Cow position:
               chr12:44920227-44919937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               282, 70
               

               Conread position:
               96-284
               

               Cow position:
               chr12:39674496-39674668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               96-310
               

               Cow position:
               chr12:7515044-7514813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               96-356
               

               Cow position:
               chr12:5543601-5543839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               97-345
               

               Cow position:
               chr12:34275813-34275579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               235, 81
               

               Conread position:
               98-322
               

               Cow position:
               chr12:15790266-15790046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               99-360
               

               Cow position:
               chr12:25445101-25444864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               100-381
               

               Cow position:
               chr12:29779715-29779985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               101-339
               

               Cow position:
               chr12:8472530-8472772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               85, 76
               

               Conread position:
               101-347
               

               Cow position:
               chr12:39452285-39452526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               55, 77
               

               Conread position:
               101-407
               

               Cow position:
               chr12:3906691-3906376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               231
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               128, 82
               

               Conread position:
               102-352
               

               Cow position:
               chr12:27572047-27572282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               102-407
               

               Cow position:
               chr12:45820166-45820465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 76
               

               Conread position:
               107-289
               

               Cow position:
               chr12:34459868-34459681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               107-407
               

               Cow position:
               chr12:7000427-7000701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               274, 62
               

               Conread position:
               107-407
               

               Cow position:
               chr12:18765789-18766075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               275, 29
               

               Conread position:
               110-358
               

               Cow position:
               chr12:45723498-45723268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               116-347
               

               Cow position:
               chr12:21044880-21045102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 53
               

               Conread position:
               116-352
               

               Cow position:
               chr12:6225975-6226186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               116-382
               

               Cow position:
               chr12:4793378-4793124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               258, 69
               

               Conread position:
               117-340
               

               Cow position:
               chr12:38182690-38182465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 147
               

               Conread position:
               117-407
               

               Cow position:
               chr12:27037270-27037548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               263, 61
               

               Conread position:
               117-407
               

               Cow position:
               chr12:31960054-31959790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               269, 54
               

               Conread position:
               136-397
               

               Cow position:
               chr12:14131599-14131852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               139-407
               

               Cow position:
               chr12:25321079-25320825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               238, 39
               

               Conread position:
               140-384
               

               Cow position:
               chr12:4797469-4797227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               48, 38
               

               Conread position:
               148-390
               

               Cow position:
               chr12:42698090-42698312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               160-390
               

               Cow position:
               chr12:3879831-3880061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               162-381
               

               Cow position:
               chr12:31532252-31532471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 8
               

               Conread position:
               166-361
               

               Cow position:
               chr12:1767058-1766861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               13, 151
               

               Conread position:
               170-407
               

               Cow position:
               chr12:2286727-2286488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               171-353
               

               Cow position:
               chr12:22859599-22859424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               171-407
               

               Cow position:
               chr12:11836377-11836134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               172-407
               

               Cow position:
               chr12:29969712-29969483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               57, 6
               

               Conread position:
               175-407
               

               Cow position:
               chr12:2711636-2711399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               176-331
               

               Cow position:
               chr12:15832329-15832176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               179-372
               

               Cow position:
               chr12:23764613-23764432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               179-435
               

               Cow position:
               chr12:31228697-31228448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               232, 11
               

               Conread position:
               185-407
               

               Cow position:
               chr12:30753849-30753626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               11, 129
               

               Conread position:
               186-372
               

               Cow position:
               chr12:44901378-44901199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               188-407
               

               Cow position:
               chr12:1773540-1773762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               191-407
               

               Cow position:
               chr12:32051628-32051414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               29, 16
               

               Conread position:
               192-403
               

               Cow position:
               chr12:6688009-6687798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               181, 61
               

               Conread position:
               192-406
               

               Cow position:
               chr12:41581231-41581022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               18, 110
               

               Conread position:
               194-345
               

               Cow position:
               chr12:28651228-28651078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-385
               

               Cow position:
               chr12:34148243-34148436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               195-322
               

               Cow position:
               chr12:4962751-4962622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-343
               

               Cow position:
               chr12:30226818-30226966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               195-351
               

               Cow position:
               chr12:42143273-42143119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               196-403
               

               Cow position:
               chr12:32715155-32714951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               191, 10
               

               Conread position:
               198-371
               

               Cow position:
               chr12:3675416-3675588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               198-407
               

               Cow position:
               chr12:44595699-44595908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               200-406
               

               Cow position:
               chr12:42286081-42285872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               202-345
               

               Cow position:
               chr12:28598371-28598227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               203-379
               

               Cow position:
               chr12:45167909-45168087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               17, 58
               

               Conread position:
               205-343
               

               Cow position:
               chr12:27430612-27430473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               205-357
               

               Cow position:
               chr12:24437530-24437682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-390
               

               Cow position:
               chr12:11660026-11659844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               168, 83
               

               Conread position:
               205-406
               

               Cow position:
               chr12:29995356-29995556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 130
               

               Conread position:
               206-339
               

               Cow position:
               chr12:20355318-20355186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               206-379
               

               Cow position:
               chr12:30919529-30919356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr12:8943118-8943317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               31, 157
               

               Conread position:
               206-407
               

               Cow position:
               chr12:23574865-23574666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               167, 24
               

               Conread position:
               207-371
               

               Cow position:
               chr12:45014782-45014618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               209-371
               

               Cow position:
               chr12:39663102-39663261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               210-356
               

               Cow position:
               chr12:25441741-25441594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               127, 59
               

               Conread position:
               210-407
               

               Cow position:
               chr12:9914889-9914692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               211-369
               

               Cow position:
               chr12:1701707-1701864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               214-407
               

               Cow position:
               chr12:19697494-19697305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               215-390
               

               Cow position:
               chr12:6241414-6241239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               215-407
               

               Cow position:
               chr12:35770926-35771116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr12:15700174-15699975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               78, 66
               

               Conread position:
               216-407
               

               Cow position:
               chr12:16147582-16147388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               96, 15
               

               Conread position:
               216-407
               

               Cow position:
               chr12:38774149-38774336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               217-372
               

               Cow position:
               chr12:6754288-6754134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               217-400
               

               Cow position:
               chr12:40910192-40910381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               6, 41
               

               Conread position:
               218-369
               

               Cow position:
               chr12:1889488-1889636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               219-400
               

               Cow position:
               chr12:7960494-7960674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               115, 6
               

               Conread position:
               219-407
               

               Cow position:
               chr12:7978128-7977938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               154, 93
               

               Conread position:
               220-367
               

               Cow position:
               chr12:12912847-12912994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 104
               

               Conread position:
               220-407
               

               Cow position:
               chr12:24032588-24032400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 148
               

               Conread position:
               221-398
               

               Cow position:
               chr12:17881950-17881773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               221-401
               

               Cow position:
               chr12:27802962-27803144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               158, 14
               

               Conread position:
               221-407
               

               Cow position:
               chr12:1031068-1030881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               153, 87
               

               Conread position:
               221-407
               

               Cow position:
               chr12:30194790-30194610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               152, 112
               

               Conread position:
               222-339
               

               Cow position:
               chr12:6958308-6958190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               222-370
               

               Cow position:
               chr12:7311468-7311320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 13
               

               Conread position:
               222-372
               

               Cow position:
               chr12:45001980-45002129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               222-375
               

               Cow position:
               chr12:15163227-15163075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               222-379
               

               Cow position:
               chr12:19502342-19502496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               222-383
               

               Cow position:
               chr12:12301006-12300841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 20
               

               Conread position:
               222-384
               

               Cow position:
               chr12:23836418-23836257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               21, 98
               

               Conread position:
               222-389
               

               Cow position:
               chr12:4866905-4866735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               222-389
               

               Cow position:
               chr12:42163126-42162966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               113, 22
               

               Conread position:
               222-389
               

               Cow position:
               chr12:42181041-42181207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-402
               

               Cow position:
               chr12:41159675-41159498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-402
               

               Cow position:
               chr12:46120743-46120922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 152
               

               Conread position:
               222-405
               

               Cow position:
               chr12:16056770-16056955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               150, 173
               

               Conread position:
               222-405
               

               Cow position:
               chr12:33323407-33323590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               222-406
               

               Cow position:
               chr12:4341656-4341836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr12:41474177-41473991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr12:5714713-5714531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               151, 10
               

               Conread position:
               222-407
               

               Cow position:
               chr12:7884593-7884779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               152, 172
               

               Conread position:
               222-407
               

               Cow position:
               chr12:10942375-10942188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr12:15122414-15122225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr12:18523657-18523466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               158
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               92, 114
               

               Conread position:
               222-407
               

               Cow position:
               chr12:30805946-30805757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               71, 162
               

               Conread position:
               222-407
               

               Cow position:
               chr12:33851445-33851261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               151, 103
               

               Conread position:
               222-407
               

               Cow position:
               chr12:42879782-42879596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               223-370
               

               Cow position:
               chr12:34195623-34195767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               223-373
               

               Cow position:
               chr12:7457458-7457606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               223-380
               

               Cow position:
               chr12:3599673-3599828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               223-381
               

               Cow position:
               chr12:13911486-13911654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               223-399
               

               Cow position:
               chr12:19261282-19261104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               151, 172
               

               Conread position:
               223-400
               

               Cow position:
               chr12:23446807-23446630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               150, 99
               

               Conread position:
               223-402
               

               Cow position:
               chr12:42749525-42749348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 90
               

               Conread position:
               223-403
               

               Cow position:
               chr12:7299371-7299554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               20, 152
               

               Conread position:
               223-407
               

               Cow position:
               chr12:11587861-11587676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               156, 148
               

               Conread position:
               223-407
               

               Cow position:
               chr12:23916929-23916746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               151, 89
               

               Conread position:
               223-407
               

               Cow position:
               chr12:26749865-26750056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               223-407
               

               Cow position:
               chr12:29675055-29675236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               223-407
               

               Cow position:
               chr12:42967081-42966902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               158, 33
               

               Conread position:
               223-419
               

               Cow position:
               chr12:45092533-45092339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               224-357
               

               Cow position:
               chr12:43854979-43854847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               224-386
               

               Cow position:
               chr12:37256099-37255944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               224-406
               

               Cow position:
               chr12:23939303-23939127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               153, 39
               

               Conread position:
               224-407
               

               Cow position:
               chr12:6210071-6210255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr12:44517652-44517833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               226-396
               

               Cow position:
               chr12:24023718-24023885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               226-397
               

               Cow position:
               chr12:4135163-4134990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               9, 169
               

               Conread position:
               226-405
               

               Cow position:
               chr12:18943574-18943753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr12:46333428-46333253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               230-356
               

               Cow position:
               chr12:23106017-23105891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               230-405
               

               Cow position:
               chr12:17671510-17671341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               231-341
               

               Cow position:
               chr12:18938947-18938837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 43
               

               Conread position:
               231-343
               

               Cow position:
               chr12:31841648-31841536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-343
               

               Cow position:
               chr12:37123728-37123616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 26
               

               Conread position:
               231-351
               

               Cow position:
               chr12:3586197-3586077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-353
               

               Cow position:
               chr12:47929279-47929158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               231-355
               

               Cow position:
               chr12:29200315-29200441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               231-357
               

               Cow position:
               chr12:26147091-26147217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               231-357
               

               Cow position:
               chr12:26868735-26868860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-359
               

               Cow position:
               chr12:35469369-35469496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               231-360
               

               Cow position:
               chr12:12532413-12532541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               231-365
               

               Cow position:
               chr12:9439373-9439506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-367
               

               Cow position:
               chr12:25814232-25814090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr12:36994037-36994178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr12:38154992-38155133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-375
               

               Cow position:
               chr12:45069305-45069452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               231-376
               

               Cow position:
               chr12:29966181-29966040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               139, 81
               

               Conread position:
               231-379
               

               Cow position:
               chr12:37993653-37993801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr12:40881839-40881982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               231-387
               

               Cow position:
               chr12:45090273-45090427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr12:40157946-40158100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               231-400
               

               Cow position:
               chr12:5635374-5635539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-404
               

               Cow position:
               chr12:6720406-6720229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               91, 16
               

               Conread position:
               231-405
               

               Cow position:
               chr12:24222442-24222614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               231-406
               

               Cow position:
               chr12:6410655-6410830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               66, 141
               

               Conread position:
               231-406
               

               Cow position:
               chr12:30661873-30662043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr12:3623773-3623597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr12:4162276-4162464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr12:9766798-9766977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               142, 165
               

               Conread position:
               231-407
               

               Cow position:
               chr12:13988448-13988274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr12:15173902-15173728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr12:18103533-18103708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr12:19258356-19258182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               23, 69
               

               Conread position:
               231-407
               

               Cow position:
               chr12:20479259-20479426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr12:25188267-25188089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               49, 44
               

               Conread position:
               231-407
               

               Cow position:
               chr12:35368721-35368544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr12:37728223-37728043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               101, 80
               

               Conread position:
               231-407
               

               Cow position:
               chr12:38126445-38126624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr12:42254745-42254570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               152, 9
               

               Conread position:
               231-407
               

               Cow position:
               chr12:44733013-44733189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-441
               

               Cow position:
               chr12:3950267-3950475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               138, 9
               

               Conread position:
               231-443
               

               Cow position:
               chr12:37008628-37008832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               151, 76
               

               Conread position:
               231-447
               

               Cow position:
               chr12:10834054-10834261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               209, 68
               

               Conread position:
               232-361
               

               Cow position:
               chr12:11109832-11109703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               21, 26
               

               Conread position:
               232-371
               

               Cow position:
               chr12:9229422-9229561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-379
               

               Cow position:
               chr12:8859256-8859106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 94
               

               Conread position:
               232-407
               

               Cow position:
               chr12:4596542-4596368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               98, 141
               

               Conread position:
               232-407
               

               Cow position:
               chr12:14223059-14222879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               232-407
               

               Cow position:
               chr12:28582432-28582601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               147, 27
               

               Conread position:
               232-407
               

               Cow position:
               chr12:30438314-30438144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr12:31269232-31269053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr12:34465925-34466104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr12:36790734-36790908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               162, 132
               

               Conread position:
               232-408
               

               Cow position:
               chr12:5631804-5631980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               144, 80
               

               Conread position:
               233-383
               

               Cow position:
               chr12:15495976-15495825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               233-388
               

               Cow position:
               chr12:4769001-4768848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               140, 10
               

               Conread position:
               233-389
               

               Cow position:
               chr12:27621957-27622119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               233-396
               

               Cow position:
               chr12:30210560-30210394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               233-405
               

               Cow position:
               chr12:4720024-4719850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               233-406
               

               Cow position:
               chr12:48415439-48415612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               140, 100
               

               Conread position:
               233-407
               

               Cow position:
               chr12:6242102-6242272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               233-407
               

               Cow position:
               chr12:7110274-7110103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr12:15050548-15050714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               141, 37
               

               Conread position:
               233-407
               

               Cow position:
               chr12:42602167-42602339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               235-343
               

               Cow position:
               chr12:24397088-24397196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 57
               

               Conread position:
               235-343
               

               Cow position:
               chr12:44559925-44559817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-351
               

               Cow position:
               chr12:44542341-44542225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-387
               

               Cow position:
               chr12:47267234-47267385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               235-400
               

               Cow position:
               chr12:27563302-27563469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               235-402
               

               Cow position:
               chr12:7854135-7854299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               235-403
               

               Cow position:
               chr12:3197343-3197177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               235-404
               

               Cow position:
               chr12:33458222-33458051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               139, 86
               

               Conread position:
               235-406
               

               Cow position:
               chr12:46314629-46314800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               136, 98
               

               Conread position:
               235-407
               

               Cow position:
               chr12:19691159-19691331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               137, 77
               

               Conread position:
               235-407
               

               Cow position:
               chr12:25280427-25280601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr12:26217749-26217923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr12:30590842-30590670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               88, 139
               

               Conread position:
               235-407
               

               Cow position:
               chr12:31429495-31429667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               8, 97
               

               Conread position:
               235-407
               

               Cow position:
               chr12:31517096-31517270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr12:33976274-33976103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr12:34161488-34161319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr12:41215810-41215981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               138, 85
               

               Conread position:
               235-407
               

               Cow position:
               chr12:47804231-47804057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               145, 54
               

               Conread position:
               236-406
               

               Cow position:
               chr12:1333304-1333132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               143, 17
               

               Conread position:
               236-407
               

               Cow position:
               chr12:24152414-24152240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               30, 160
               

               Conread position:
               236-407
               

               Cow position:
               chr12:24211481-24211315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               138, 92
               

               Conread position:
               238-386
               

               Cow position:
               chr12:5940413-5940265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               91, 134
               

               Conread position:
               238-407
               

               Cow position:
               chr12:23855904-23855740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               143, 25
               

               Conread position:
               242-372
               

               Cow position:
               chr12:15389139-15389009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               242-407
               

               Cow position:
               chr12:5801111-5800936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 103
               

               Conread position:
               243-404
               

               Cow position:
               chr12:30819311-30819147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               134, 153
               

               Conread position:
               244-401
               

               Cow position:
               chr12:40807468-40807305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr12:12304446-12304288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               130, 68
               

               Conread position:
               245-407
               

               Cow position:
               chr12:17717127-17716977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               246-349
               

               Cow position:
               chr12:44028574-44028473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               246-367
               

               Cow position:
               chr12:43691353-43691473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               246-377
               

               Cow position:
               chr12:44905691-44905565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               246-407
               

               Cow position:
               chr12:8868818-8868974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               131, 66
               

               Conread position:
               247-380
               

               Cow position:
               chr12:25110378-25110507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr12:18963866-18964024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               248-405
               

               Cow position:
               chr12:19400755-19400912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               125, 9
               

               Conread position:
               249-407
               

               Cow position:
               chr12:15038916-15039073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               129, 9
               

               Conread position:
               252-407
               

               Cow position:
               chr12:25452389-25452545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               254-441
               

               Cow position:
               chr12:9894838-9894654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               155, 117
               

               Conread position:
               255-407
               

               Cow position:
               chr12:10491327-10491173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               7, 48
               

               Conread position:
               265-407
               

               Cow position:
               chr12:30413902-30414045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               271-376
               

               Cow position:
               chr12:25530115-25530010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               275-376
               

               Cow position:
               chr12:39675462-39675562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               279-407
               

               Cow position:
               chr12:37137495-37137620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               103, 54
               

               Conread position:
               282-404
               

               Cow position:
               chr12:17624797-17624921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               282-406
               

               Cow position:
               chr12:18420498-18420374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               57, 43
               

               Conread position:
               291-407
               

               Cow position:
               chr12:25193069-25192953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               300-407
               

               Cow position:
               chr12:29921775-29921880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               56-372
               

               Cow position:
               chr13:13181911-13182203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               84-203
               

               Cow position:
               chr13:45023453-45023336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               102, 22
               

               Conread position:
               84-399
               

               Cow position:
               chr13:5082377-5082688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               102, 21
               

               Conread position:
               85-385
               

               Cow position:
               chr13:547206-547512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               86-176
               

               Cow position:
               chr13:9124699-9124789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               78
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               88-406
               

               Cow position:
               chr13:26369237-26369568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               85, 180
               

               Conread position:
               89-204
               

               Cow position:
               chr13:39398404-39398519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               80, 92
               

               Conread position:
               89-204
               

               Cow position:
               chr13:41616631-41616515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 99
               

               Conread position:
               93-177
               

               Cow position:
               chr13:29831649-29831565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               74
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-289
               

               Cow position:
               chr13:3948253-3948429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               94-310
               

               Cow position:
               chr13:26365647-26365852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               94-350
               

               Cow position:
               chr13:32387262-32387017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               151, 77
               

               Conread position:
               94-400
               

               Cow position:
               chr13:17621996-17622321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               14, 187
               

               Conread position:
               94-407
               

               Cow position:
               chr13:4420086-4420388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               162, 10
               

               Conread position:
               94-407
               

               Cow position:
               chr13:21283960-21283658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 11
               

               Conread position:
               95-183
               

               Cow position:
               chr13:42672650-42672562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               76
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-304
               

               Cow position:
               chr13:4980794-4980988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               96-229
               

               Cow position:
               chr13:372630-372499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               115, 20
               

               Conread position:
               96-239
               

               Cow position:
               chr13:15808463-15808604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               90, 30
               

               Conread position:
               96-407
               

               Cow position:
               chr13:11095911-11096218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 131
               

               Conread position:
               97-350
               

               Cow position:
               chr13:12302603-12302360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               250, 81
               

               Conread position:
               98-266
               

               Cow position:
               chr13:50712840-50713002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               15, 82
               

               Conread position:
               98-406
               

               Cow position:
               chr13:37381557-37381844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               99-226
               

               Cow position:
               chr13:18112388-18112515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               99-407
               

               Cow position:
               chr13:13176381-13176695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 142
               

               Conread position:
               99-407
               

               Cow position:
               chr13:36771691-36771376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 6
               

               Conread position:
               101-273
               

               Cow position:
               chr13:11071442-11071282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               101-400
               

               Cow position:
               chr13:185291-185570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               272, 62
               

               Conread position:
               101-407
               

               Cow position:
               chr13:28683096-28683408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 58
               

               Conread position:
               102-407
               

               Cow position:
               chr13:11643696-11643985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               102-407
               

               Cow position:
               chr13:55316436-55316145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               272, 76
               

               Conread position:
               105-318
               

               Cow position:
               chr13:37021239-37021042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               106-364
               

               Cow position:
               chr13:9589116-9589369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               67, 28
               

               Conread position:
               106-376
               

               Cow position:
               chr13:51814180-51813922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 73
               

               Conread position:
               106-389
               

               Cow position:
               chr13:25450724-25450459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               267, 72
               

               Conread position:
               106-402
               

               Cow position:
               chr13:51116265-51115982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 72
               

               Conread position:
               106-404
               

               Cow position:
               chr13:8354969-8355246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               274, 72
               

               Conread position:
               106-407
               

               Cow position:
               chr13:3211301-3211595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 57
               

               Conread position:
               107-204
               

               Cow position:
               chr13:20722861-20722958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               89, 78
               

               Conread position:
               107-407
               

               Cow position:
               chr13:1733387-1733088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 56
               

               Conread position:
               108-434
               

               Cow position:
               chr13:9117809-9117502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               111-407
               

               Cow position:
               chr13:2413799-2414072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               116-338
               

               Cow position:
               chr13:32363444-32363205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               118-405
               

               Cow position:
               chr13:38278395-38278107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 60
               

               Conread position:
               120-350
               

               Cow position:
               chr13:9884291-9884521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               121-407
               

               Cow position:
               chr13:1043189-1042922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               249, 58
               

               Conread position:
               121-407
               

               Cow position:
               chr13:39367723-39368004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 85
               

               Conread position:
               122-349
               

               Cow position:
               chr13:1075271-1075053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               132-407
               

               Cow position:
               chr13:14771233-14771499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               120, 47
               

               Conread position:
               136-434
               

               Cow position:
               chr13:43829026-43829315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 28
               

               Conread position:
               139-348
               

               Cow position:
               chr13:563583-563383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               40, 47
               

               Conread position:
               140-407
               

               Cow position:
               chr13:56148306-56148567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 38
               

               Conread position:
               140-407
               

               Cow position:
               chr13:56160661-56160400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 38
               

               Conread position:
               157-406
               

               Cow position:
               chr13:11060786-11061026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               126, 21
               

               Conread position:
               159-407
               

               Cow position:
               chr13:13765582-13765829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               19, 138
               

               Conread position:
               159-407
               

               Cow position:
               chr13:45725686-45725939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               166-344
               

               Cow position:
               chr13:37517370-37517196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 5
               

               Conread position:
               168-346
               

               Cow position:
               chr13:6608578-6608399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               168-400
               

               Cow position:
               chr13:11591558-11591786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               168-407
               

               Cow position:
               chr13:12206857-12207087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               172-331
               

               Cow position:
               chr13:15808579-15808734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 6
               

               Conread position:
               176-406
               

               Cow position:
               chr13:51940550-51940779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               204, 30
               

               Conread position:
               185-407
               

               Cow position:
               chr13:18172151-18172382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 217
               

               Conread position:
               186-407
               

               Cow position:
               chr13:37640412-37640627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               187-406
               

               Cow position:
               chr13:20706378-20706163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               188-359
               

               Cow position:
               chr13:21294899-21295071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               188-407
               

               Cow position:
               chr13:7663598-7663378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               50, 60
               

               Conread position:
               190-407
               

               Cow position:
               chr13:52586210-52585990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               191-383
               

               Cow position:
               chr13:19750545-19750736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               186, 29
               

               Conread position:
               194-381
               

               Cow position:
               chr13:23167269-23167083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               195-325
               

               Cow position:
               chr13:41616215-41616086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               12, 59
               

               Conread position:
               196-384
               

               Cow position:
               chr13:26889056-26889243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               196-403
               

               Cow position:
               chr13:17439936-17439730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               10, 115
               

               Conread position:
               197-370
               

               Cow position:
               chr13:7104489-7104661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               200-383
               

               Cow position:
               chr13:40154894-40154707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               201-407
               

               Cow position:
               chr13:3315836-3315634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               5, 20
               

               Conread position:
               205-350
               

               Cow position:
               chr13:5079523-5079374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               205-368
               

               Cow position:
               chr13:39398498-39398658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               148, 15
               

               Conread position:
               205-379
               

               Cow position:
               chr13:42640227-42640397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               18, 138
               

               Conread position:
               205-400
               

               Cow position:
               chr13:23270360-23270173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               205-406
               

               Cow position:
               chr13:6389238-6389422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               205-406
               

               Cow position:
               chr13:43893482-43893279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr13:2773969-2774171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               120, 170
               

               Conread position:
               205-407
               

               Cow position:
               chr13:7076098-7076302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               18, 133
               

               Conread position:
               205-407
               

               Cow position:
               chr13:9900003-9900192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               176, 25
               

               Conread position:
               206-370
               

               Cow position:
               chr13:15143999-15143836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               38, 22
               

               Conread position:
               206-376
               

               Cow position:
               chr13:13775398-13775230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               206-383
               

               Cow position:
               chr13:53330113-53330298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               207-353
               

               Cow position:
               chr13:47227517-47227369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               207-383
               

               Cow position:
               chr13:6926362-6926537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               207-407
               

               Cow position:
               chr13:38873100-38872908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               208-386
               

               Cow position:
               chr13:2404607-2404774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               208-405
               

               Cow position:
               chr13:42672577-42672380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               40, 15
               

               Conread position:
               208-407
               

               Cow position:
               chr13:20271379-20271183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               62, 27
               

               Conread position:
               215-406
               

               Cow position:
               chr13:7149655-7149470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               215-407
               

               Cow position:
               chr13:15193037-15192846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               158
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               9, 108
               

               Conread position:
               215-407
               

               Cow position:
               chr13:34261081-34261274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               19, 164
               

               Conread position:
               216-362
               

               Cow position:
               chr13:37751213-37751068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               216-372
               

               Cow position:
               chr13:18340383-18340542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-385
               

               Cow position:
               chr13:54582726-54582895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 79
               

               Conread position:
               216-397
               

               Cow position:
               chr13:25695914-25695734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr13:1147299-1147107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               7, 138
               

               Conread position:
               216-407
               

               Cow position:
               chr13:3989056-3989247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               7, 28
               

               Conread position:
               218-352
               

               Cow position:
               chr13:50622956-50622823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               218-379
               

               Cow position:
               chr13:55765324-55765163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               5, 37
               

               Conread position:
               218-388
               

               Cow position:
               chr13:19582228-19582061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               5, 40
               

               Conread position:
               218-402
               

               Cow position:
               chr13:18491450-18491641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               218-407
               

               Cow position:
               chr13:43185025-43184828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               107, 36
               

               Conread position:
               219-370
               

               Cow position:
               chr13:6486392-6486244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               219-407
               

               Cow position:
               chr13:20174597-20174792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               114, 181
               

               Conread position:
               221-405
               

               Cow position:
               chr13:4664996-4664824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr13:16020711-16020896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               153, 10
               

               Conread position:
               222-338
               

               Cow position:
               chr13:16163441-16163557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-346
               

               Cow position:
               chr13:21188227-21188351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-352
               

               Cow position:
               chr13:28439268-28439398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-367
               

               Cow position:
               chr13:17813330-17813475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-373
               

               Cow position:
               chr13:24110339-24110490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               129
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-379
               

               Cow position:
               chr13:15996893-15997049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               222-380
               

               Cow position:
               chr13:15083524-15083677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               152, 31
               

               Conread position:
               222-381
               

               Cow position:
               chr13:8699878-8699719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-383
               

               Cow position:
               chr13:9707887-9707728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               152, 9
               

               Conread position:
               222-393
               

               Cow position:
               chr13:51822015-51821850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               222-402
               

               Cow position:
               chr13:18166591-18166772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr13:1568791-1568966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               152, 84
               

               Conread position:
               222-406
               

               Cow position:
               chr13:9265967-9265787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               142, 31
               

               Conread position:
               222-407
               

               Cow position:
               chr13:827105-827286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr13:10925060-10924869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               152, 44
               

               Conread position:
               222-407
               

               Cow position:
               chr13:13297538-13297719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               151, 48
               

               Conread position:
               222-407
               

               Cow position:
               chr13:13320656-13320838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               152, 163
               

               Conread position:
               222-407
               

               Cow position:
               chr13:15460915-15460730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               131, 13
               

               Conread position:
               222-407
               

               Cow position:
               chr13:17110086-17110264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               156, 77
               

               Conread position:
               222-407
               

               Cow position:
               chr13:17837810-17837993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               150
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr13:20137680-20137868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr13:20666527-20666341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               166, 90
               

               Conread position:
               222-407
               

               Cow position:
               chr13:24230072-24230253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               152
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               6, 163
               

               Conread position:
               222-407
               

               Cow position:
               chr13:37818892-37818706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               143, 77
               

               Conread position:
               222-410
               

               Cow position:
               chr13:28440676-28440488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               152, 90
               

               Conread position:
               222-441
               

               Cow position:
               chr13:26480345-26480136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               187, 84
               

               Conread position:
               222-472
               

               Cow position:
               chr13:43919403-43919152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 154
               

               Conread position:
               223-348
               

               Cow position:
               chr13:53865496-53865621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-352
               

               Cow position:
               chr13:30148703-30148574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-370
               

               Cow position:
               chr13:16908077-16908224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-377
               

               Cow position:
               chr13:56958841-56958982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               223-380
               

               Cow position:
               chr13:54286867-54286712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               223-382
               

               Cow position:
               chr13:37621497-37621341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               223-385
               

               Cow position:
               chr13:15993247-15993408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               223-386
               

               Cow position:
               chr13:19223515-19223669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               223-400
               

               Cow position:
               chr13:52055732-52055555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-402
               

               Cow position:
               chr13:18929389-18929567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-404
               

               Cow position:
               chr13:17021865-17021688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               223-406
               

               Cow position:
               chr13:37593087-37592901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr13:6974022-6974204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               151
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr13:11260135-11260314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               148, 89
               

               Conread position:
               223-407
               

               Cow position:
               chr13:15257507-15257325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               151, 76
               

               Conread position:
               223-407
               

               Cow position:
               chr13:15289061-15288879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               156, 89
               

               Conread position:
               223-407
               

               Cow position:
               chr13:19188161-19188344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr13:19393152-19393338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               151, 83
               

               Conread position:
               223-407
               

               Cow position:
               chr13:20562853-20563039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr13:21275719-21275901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr13:43595243-43595065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               223-412
               

               Cow position:
               chr13:40491074-40491267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               223-426
               

               Cow position:
               chr13:28552450-28552648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               224-406
               

               Cow position:
               chr13:25926651-25926836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr13:585009-584828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               150, 88
               

               Conread position:
               224-407
               

               Cow position:
               chr13:9975215-9975032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 153
               

               Conread position:
               224-407
               

               Cow position:
               chr13:11321756-11321572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               119, 150
               

               Conread position:
               224-407
               

               Cow position:
               chr13:21242223-21242040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               162, 147
               

               Conread position:
               224-407
               

               Cow position:
               chr13:46111830-46112010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               150, 75
               

               Conread position:
               226-387
               

               Cow position:
               chr13:6183557-6183396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr13:9644017-9643843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               230-406
               

               Cow position:
               chr13:17159011-17158832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               230-407
               

               Cow position:
               chr13:20650115-20649940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               230-441
               

               Cow position:
               chr13:48037490-48037698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               142, 82
               

               Conread position:
               231-331
               

               Cow position:
               chr13:25521047-25520947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-341
               

               Cow position:
               chr13:6975977-6975867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-351
               

               Cow position:
               chr13:43787969-43787849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-351
               

               Cow position:
               chr13:43839808-43839688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-366
               

               Cow position:
               chr13:52536430-52536568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               231-367
               

               Cow position:
               chr13:10522805-10522937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr13:4404399-4404540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-372
               

               Cow position:
               chr13:27180909-27181050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-373
               

               Cow position:
               chr13:20519929-20520071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-373
               

               Cow position:
               chr13:47243684-47243545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 91
               

               Conread position:
               231-373
               

               Cow position:
               chr13:48222680-48222538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-379
               

               Cow position:
               chr13:59461112-59461253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               231-381
               

               Cow position:
               chr13:21981104-21980957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               143, 43
               

               Conread position:
               231-381
               

               Cow position:
               chr13:45352899-45353050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               231-387
               

               Cow position:
               chr13:14576081-14576235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               42, 37
               

               Conread position:
               231-387
               

               Cow position:
               chr13:55081011-55081168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               139, 26
               

               Conread position:
               231-399
               

               Cow position:
               chr13:37069213-37069386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-400
               

               Cow position:
               chr13:16014679-16014850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               231-403
               

               Cow position:
               chr13:52057425-52057600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               143, 163
               

               Conread position:
               231-404
               

               Cow position:
               chr13:25817395-25817569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               140, 73
               

               Conread position:
               231-405
               

               Cow position:
               chr13:5263413-5263243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr13:6616891-6616710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr13:25579322-25579146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-406
               

               Cow position:
               chr13:42200487-42200662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr13:51901452-51901635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr13:60509252-60509075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr13:8609679-8609505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr13:12547040-12546867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr13:15282066-15281896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               139, 9
               

               Conread position:
               231-407
               

               Cow position:
               chr13:15991363-15991187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               22, 118
               

               Conread position:
               231-407
               

               Cow position:
               chr13:17350223-17350397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               140, 59
               

               Conread position:
               231-407
               

               Cow position:
               chr13:17823082-17822907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr13:18197740-18197563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               141, 124
               

               Conread position:
               231-407
               

               Cow position:
               chr13:19278963-19279140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               142, 97
               

               Conread position:
               231-407
               

               Cow position:
               chr13:21170394-21170573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr13:23856079-23856256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               136, 108
               

               Conread position:
               231-407
               

               Cow position:
               chr13:37503715-37503537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               66, 74
               

               Conread position:
               231-407
               

               Cow position:
               chr13:40722839-40722667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr13:43762037-43762214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               139, 22
               

               Conread position:
               231-407
               

               Cow position:
               chr13:55162080-55162255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr13:60973948-60974126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               141, 22
               

               Conread position:
               231-407
               

               Cow position:
               chr13:62007975-62008156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               153
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-412
               

               Cow position:
               chr13:8667487-8667667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               83, 97
               

               Conread position:
               231-441
               

               Cow position:
               chr13:24715109-24715320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               92, 200
               

               Conread position:
               232-346
               

               Cow position:
               chr13:11942310-11942196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-373
               

               Cow position:
               chr13:32017643-32017502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               232-375
               

               Cow position:
               chr13:6980790-6980931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               232-380
               

               Cow position:
               chr13:14796078-14796224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               232-404
               

               Cow position:
               chr13:23478899-23479073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               141, 163
               

               Conread position:
               232-406
               

               Cow position:
               chr13:6342219-6342045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               152, 80
               

               Conread position:
               232-407
               

               Cow position:
               chr13:12925649-12925817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               232-408
               

               Cow position:
               chr13:51857017-51856841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 140
               

               Conread position:
               233-379
               

               Cow position:
               chr13:2776158-2776303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               233-407
               

               Cow position:
               chr13:17971159-17970983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               158, 56
               

               Conread position:
               234-376
               

               Cow position:
               chr13:34018801-34018943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               234-402
               

               Cow position:
               chr13:6442234-6442074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               235-344
               

               Cow position:
               chr13:37978258-37978150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               235-381
               

               Cow position:
               chr13:44003573-44003718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               139, 107
               

               Conread position:
               235-385
               

               Cow position:
               chr13:52569131-52568983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               235-403
               

               Cow position:
               chr13:20784462-20784634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr13:6861053-6861226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               235-407
               

               Cow position:
               chr13:20839438-20839607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr13:24753759-24753926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr13:25428351-25428184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr13:25435251-25435076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr13:25537495-25537670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr13:34728966-34728798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               134, 39
               

               Conread position:
               235-407
               

               Cow position:
               chr13:37981872-37981701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               137, 74
               

               Conread position:
               235-407
               

               Cow position:
               chr13:43194041-43194221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               236-376
               

               Cow position:
               chr13:47193263-47193393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               236-385
               

               Cow position:
               chr13:49457557-49457704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               145, 95
               

               Conread position:
               236-402
               

               Cow position:
               chr13:8232875-8233034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr13:8555338-8555502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr13:37947078-37946906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               140, 63
               

               Conread position:
               237-407
               

               Cow position:
               chr13:5758469-5758297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 158
               

               Conread position:
               237-407
               

               Cow position:
               chr13:52284690-52284852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               136, 22
               

               Conread position:
               238-379
               

               Cow position:
               chr13:24215799-24215658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 18
               

               Conread position:
               238-404
               

               Cow position:
               chr13:7265244-7265080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               138, 15
               

               Conread position:
               242-390
               

               Cow position:
               chr13:50457737-50457881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               242-407
               

               Cow position:
               chr13:15974496-15974656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 111
               

               Conread position:
               242-407
               

               Cow position:
               chr13:47322531-47322362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               242-441
               

               Cow position:
               chr13:18989602-18989791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               166, 14
               

               Conread position:
               243-377
               

               Cow position:
               chr13:18516926-18517059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               243-380
               

               Cow position:
               chr13:33974614-33974750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               243-390
               

               Cow position:
               chr13:15069838-15069982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               243-406
               

               Cow position:
               chr13:46736095-46736255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr13:9593386-9593552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               130, 16
               

               Conread position:
               243-407
               

               Cow position:
               chr13:45074034-45073874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               137, 69
               

               Conread position:
               243-407
               

               Cow position:
               chr13:59170533-59170695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               244-403
               

               Cow position:
               chr13:10845485-10845635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               244-406
               

               Cow position:
               chr13:6061127-6060964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr13:8652561-8652395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr13:29831556-29831393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               40, 109
               

               Conread position:
               245-404
               

               Cow position:
               chr13:12670569-12670404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               125, 154
               

               Conread position:
               246-405
               

               Cow position:
               chr13:19240314-19240478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               101, 25
               

               Conread position:
               247-386
               

               Cow position:
               chr13:33054488-33054351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               247-396
               

               Cow position:
               chr13:31529761-31529912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr13:6153900-6153739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr13:10989185-10989032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr13:49022984-49022822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               248-407
               

               Cow position:
               chr13:15110199-15110363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               248-407
               

               Cow position:
               chr13:52749584-52749434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               248-421
               

               Cow position:
               chr13:15984894-15985067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 10
               

               Conread position:
               251-406
               

               Cow position:
               chr13:46181680-46181834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               251-407
               

               Cow position:
               chr13:2803355-2803516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               35, 125
               

               Conread position:
               252-407
               

               Cow position:
               chr13:19183757-19183910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               253-407
               

               Cow position:
               chr13:8524728-8524572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               253-407
               

               Cow position:
               chr13:60393674-60393827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               255-372
               

               Cow position:
               chr13:15739585-15739698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               256-407
               

               Cow position:
               chr13:25531897-25531744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               114, 76
               

               Conread position:
               258-407
               

               Cow position:
               chr13:15621706-15621858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               116, 24
               

               Conread position:
               258-407
               

               Cow position:
               chr13:60389593-60389449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               261-381
               

               Cow position:
               chr13:40493821-40493938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               262-389
               

               Cow position:
               chr13:54145574-54145450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 59
               

               Conread position:
               262-403
               

               Cow position:
               chr13:8369065-8369198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               262-407
               

               Cow position:
               chr13:16187997-16187853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               262-407
               

               Cow position:
               chr13:18243761-18243905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               263-383
               

               Cow position:
               chr13:50713110-50713230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               271-407
               

               Cow position:
               chr13:52929619-52929753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               279-407
               

               Cow position:
               chr13:61166534-61166407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               287-407
               

               Cow position:
               chr13:7097855-7097971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               294-406
               

               Cow position:
               chr13:57445267-57445152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               89, 26
               

               Conread position:
               297-406
               

               Cow position:
               chr13:20128600-20128707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               300-407
               

               Cow position:
               chr13:16024526-16024634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               301-407
               

               Cow position:
               chr13:2192649-2192754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 71
               

               Conread position:
               83-183
               

               Cow position:
               chr14:17475743-17475643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               83-373
               

               Cow position:
               chr14:22997800-22997510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               57, 35
               

               Conread position:
               87-199
               

               Cow position:
               chr14:20599907-20600022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 101
               

               Conread position:
               87-407
               

               Cow position:
               chr14:33827935-33828261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               129, 82
               

               Conread position:
               88-407
               

               Cow position:
               chr14:18657819-18657503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 80
               

               Conread position:
               89-183
               

               Cow position:
               chr14:27364407-27364502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               89-331
               

               Cow position:
               chr14:29631733-29631956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               93-302
               

               Cow position:
               chr14:4357062-4356855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               9, 95
               

               Conread position:
               94-239
               

               Cow position:
               chr14:5639568-5639427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               111, 11
               

               Conread position:
               94-313
               

               Cow position:
               chr14:25675431-25675220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-385
               

               Cow position:
               chr14:29911845-29912126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               94-407
               

               Cow position:
               chr14:20385209-20384884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               85, 39
               

               Conread position:
               94-441
               

               Cow position:
               chr14:10631323-10630992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 95
               

               Conread position:
               95-351
               

               Cow position:
               chr14:4209293-4209551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 83
               

               Conread position:
               96-211
               

               Cow position:
               chr14:12034966-12035086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 66
               

               Conread position:
               96-400
               

               Cow position:
               chr14:37155681-37155970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               8, 83
               

               Conread position:
               97-233
               

               Cow position:
               chr14:37152097-37151963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               97-327
               

               Cow position:
               chr14:26881210-26880988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               96, 81
               

               Conread position:
               97-407
               

               Cow position:
               chr14:17238141-17238454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               89, 81
               

               Conread position:
               99-203
               

               Cow position:
               chr14:33326792-33326687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               101-210
               

               Cow position:
               chr14:48762210-48762317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               85, 77
               

               Conread position:
               101-330
               

               Cow position:
               chr14:4044225-4044461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               77, 163
               

               Conread position:
               101-353
               

               Cow position:
               chr14:15490966-15491203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               101-407
               

               Cow position:
               chr14:18763622-18763343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               103-331
               

               Cow position:
               chr14:49825635-49825862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               83, 73
               

               Conread position:
               105-406
               

               Cow position:
               chr14:22582970-22583247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               106-407
               

               Cow position:
               chr14:26097910-26097591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               116-403
               

               Cow position:
               chr14:44257742-44258023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 62
               

               Conread position:
               119-406
               

               Cow position:
               chr14:25824499-25824789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               64, 59
               

               Conread position:
               159-351
               

               Cow position:
               chr14:16207648-16207453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               22, 18
               

               Conread position:
               168-346
               

               Cow position:
               chr14:42276486-42276663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 146
               

               Conread position:
               169-337
               

               Cow position:
               chr14:16761745-16761579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               172-370
               

               Cow position:
               chr14:24712759-24712560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               179-406
               

               Cow position:
               chr14:25778976-25779197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               180-407
               

               Cow position:
               chr14:33309626-33309406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               183-406
               

               Cow position:
               chr14:48900056-48900276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               184-354
               

               Cow position:
               chr14:25611364-25611534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               190-407
               

               Cow position:
               chr14:24981348-24981555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               191-388
               

               Cow position:
               chr14:20481955-20481759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               194-406
               

               Cow position:
               chr14:37884027-37883814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               179, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr14:19129393-19129610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr14:34331436-34331224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               176, 36
               

               Conread position:
               194-409
               

               Cow position:
               chr14:34096678-34096468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               12, 120
               

               Conread position:
               195-344
               

               Cow position:
               chr14:25073014-25073163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 59
               

               Conread position:
               195-376
               

               Cow position:
               chr14:34983755-34983940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-406
               

               Cow position:
               chr14:1978187-1977971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               41, 12
               

               Conread position:
               199-332
               

               Cow position:
               chr14:20362070-20361944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               202-407
               

               Cow position:
               chr14:40165322-40165524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               205-378
               

               Cow position:
               chr14:39037128-39037293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               205-382
               

               Cow position:
               chr14:27076878-27077052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr14:8786648-8786451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               14, 49
               

               Conread position:
               206-365
               

               Cow position:
               chr14:18350958-18350798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               206-402
               

               Cow position:
               chr14:42330255-42330448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               91, 41
               

               Conread position:
               206-405
               

               Cow position:
               chr14:33341660-33341855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               168, 51
               

               Conread position:
               206-406
               

               Cow position:
               chr14:12634981-12634787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr14:5572846-5573043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               207-338
               

               Cow position:
               chr14:20070972-20071103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-371
               

               Cow position:
               chr14:16749786-16749620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               11, 49
               

               Conread position:
               207-407
               

               Cow position:
               chr14:35503260-35503465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               208-342
               

               Cow position:
               chr14:27303558-27303694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               208-407
               

               Cow position:
               chr14:12127507-12127311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               210-407
               

               Cow position:
               chr14:45052347-45052541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 47
               

               Conread position:
               212-407
               

               Cow position:
               chr14:49021992-49021802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               214-407
               

               Cow position:
               chr14:47672976-47672786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               20, 115
               

               Conread position:
               215-406
               

               Cow position:
               chr14:5630070-5630261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               25, 171
               

               Conread position:
               215-406
               

               Cow position:
               chr14:7695175-7695367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 104
               

               Conread position:
               215-407
               

               Cow position:
               chr14:16032921-16033109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               138, 99
               

               Conread position:
               215-407
               

               Cow position:
               chr14:19618840-19618650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               158, 8
               

               Conread position:
               216-406
               

               Cow position:
               chr14:49487870-49488061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               7, 97
               

               Conread position:
               217-400
               

               Cow position:
               chr14:1859700-1859520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               96, 7
               

               Conread position:
               218-407
               

               Cow position:
               chr14:12035323-12035508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               219-383
               

               Cow position:
               chr14:11056817-11056656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               219-383
               

               Cow position:
               chr14:14466541-14466387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               219-405
               

               Cow position:
               chr14:37901908-37902098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               153, 86
               

               Conread position:
               220-407
               

               Cow position:
               chr14:46654627-46654443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               161, 33
               

               Conread position:
               220-447
               

               Cow position:
               chr14:12520388-12520161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               189, 158
               

               Conread position:
               221-387
               

               Cow position:
               chr14:18309392-18309226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               221-405
               

               Cow position:
               chr14:8541296-8541116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr14:10858349-10858534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               221-407
               

               Cow position:
               chr14:24387356-24387549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr14:36289883-36289698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               52, 47
               

               Conread position:
               221-407
               

               Cow position:
               chr14:42155059-42154863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 80
               

               Conread position:
               222-342
               

               Cow position:
               chr14:24785574-24785694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-346
               

               Cow position:
               chr14:11697392-11697515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               222-348
               

               Cow position:
               chr14:47200207-47200085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               222-377
               

               Cow position:
               chr14:22916374-22916221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               222-378
               

               Cow position:
               chr14:10691712-10691554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               222-379
               

               Cow position:
               chr14:20466853-20467003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               222-386
               

               Cow position:
               chr14:4848264-4848430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               150, 109
               

               Conread position:
               222-400
               

               Cow position:
               chr14:48496228-48496053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               152, 70
               

               Conread position:
               222-401
               

               Cow position:
               chr14:20600301-20600481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 155
               

               Conread position:
               222-406
               

               Cow position:
               chr14:8101709-8101890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr14:46685223-46685398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               111, 63
               

               Conread position:
               222-407
               

               Cow position:
               chr14:6541810-6541623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr14:6735948-6735758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               12, 72
               

               Conread position:
               222-407
               

               Cow position:
               chr14:16550087-16549903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               222-407
               

               Cow position:
               chr14:24236743-24236928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               222-407
               

               Cow position:
               chr14:29964936-29965118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr14:35420848-35420662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 36
               

               Conread position:
               222-407
               

               Cow position:
               chr14:41127825-41127995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr14:42436941-42437126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               155
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 112
               

               Conread position:
               222-407
               

               Cow position:
               chr14:45605014-45605192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               152, 57
               

               Conread position:
               222-420
               

               Cow position:
               chr14:13928493-13928686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               120, 46
               

               Conread position:
               222-443
               

               Cow position:
               chr14:11643333-11643116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               152, 98
               

               Conread position:
               222-445
               

               Cow position:
               chr14:12511980-12511764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               223-351
               

               Cow position:
               chr14:20915062-20914932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               223-369
               

               Cow position:
               chr14:30431651-30431505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               223-376
               

               Cow position:
               chr14:27823349-27823501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-379
               

               Cow position:
               chr14:27733524-27733676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               147, 44
               

               Conread position:
               223-386
               

               Cow position:
               chr14:15428395-15428558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-388
               

               Cow position:
               chr14:10609597-10609763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-400
               

               Cow position:
               chr14:34775829-34775654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-405
               

               Cow position:
               chr14:28378276-28378459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr14:7036440-7036254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr14:12954465-12954281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               156, 24
               

               Conread position:
               223-407
               

               Cow position:
               chr14:15055074-15054888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr14:19951483-19951670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr14:23104082-23103895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 77
               

               Conread position:
               223-407
               

               Cow position:
               chr14:42419356-42419173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               150, 169
               

               Conread position:
               223-407
               

               Cow position:
               chr14:50362711-50362896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               223-426
               

               Cow position:
               chr14:38144190-38143988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               186, 152
               

               Conread position:
               224-379
               

               Cow position:
               chr14:21535388-21535234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               224-383
               

               Cow position:
               chr14:1646266-1646108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               46, 89
               

               Conread position:
               224-384
               

               Cow position:
               chr14:18941367-18941210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               224-400
               

               Cow position:
               chr14:40283536-40283717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               90, 111
               

               Conread position:
               224-405
               

               Cow position:
               chr14:48744434-48744612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr14:33830220-33830397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr14:36443100-36442916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr14:37422864-37422687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               146, 60
               

               Conread position:
               225-385
               

               Cow position:
               chr14:45291455-45291300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               225-407
               

               Cow position:
               chr14:3943631-3943452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               225-407
               

               Cow position:
               chr14:20712768-20712589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               147, 66
               

               Conread position:
               226-407
               

               Cow position:
               chr14:4282586-4282407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               151
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               145, 86
               

               Conread position:
               226-407
               

               Cow position:
               chr14:9901104-9901279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               230-406
               

               Cow position:
               chr14:29723661-29723491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               230-407
               

               Cow position:
               chr14:23478751-23478921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               230-407
               

               Cow position:
               chr14:46997963-46998137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               231-329
               

               Cow position:
               chr14:19513619-19513521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-332
               

               Cow position:
               chr14:44153051-44152950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-341
               

               Cow position:
               chr14:18270286-18270396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-343
               

               Cow position:
               chr14:50519254-50519142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-346
               

               Cow position:
               chr14:18412666-18412551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-359
               

               Cow position:
               chr14:21406785-21406657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-361
               

               Cow position:
               chr14:20245244-20245113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               231-371
               

               Cow position:
               chr14:50146805-50146944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               231-373
               

               Cow position:
               chr14:5959063-5958920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               231-379
               

               Cow position:
               chr14:34399873-34399726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-380
               

               Cow position:
               chr14:50589471-50589324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               231-383
               

               Cow position:
               chr14:34449046-34448894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-387
               

               Cow position:
               chr14:28924093-28924249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-388
               

               Cow position:
               chr14:4227297-4227138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               231-388
               

               Cow position:
               chr14:23419721-23419880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-388
               

               Cow position:
               chr14:39618451-39618295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-391
               

               Cow position:
               chr14:13385294-13385452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               231-397
               

               Cow position:
               chr14:10693329-10693168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-399
               

               Cow position:
               chr14:16256684-16256861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-403
               

               Cow position:
               chr14:25225653-25225828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               139, 165
               

               Conread position:
               231-405
               

               Cow position:
               chr14:11031356-11031186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr14:11470222-11470050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               142, 26
               

               Conread position:
               231-405
               

               Cow position:
               chr14:40230710-40230540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-406
               

               Cow position:
               chr14:40754322-40754145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr14:1796118-1796291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               149, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr14:4990927-4991106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr14:7959712-7959878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               151, 76
               

               Conread position:
               231-407
               

               Cow position:
               chr14:14316812-14316983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr14:19863509-19863332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               147
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr14:21357483-21357661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               151, 79
               

               Conread position:
               231-407
               

               Cow position:
               chr14:21933418-21933239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr14:27275088-27275260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr14:33247504-33247331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr14:35381517-35381691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr14:38920877-38921050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               100, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr14:45718338-45718165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               82, 50
               

               Conread position:
               232-331
               

               Cow position:
               chr14:24806523-24806619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               232-361
               

               Cow position:
               chr14:11567331-11567460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-376
               

               Cow position:
               chr14:23078866-23078722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-406
               

               Cow position:
               chr14:14187257-14187432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               232-406
               

               Cow position:
               chr14:32452175-32452352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr14:4203172-4202993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr14:12244459-12244281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr14:14622250-14622079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr14:22941802-22941621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               233-398
               

               Cow position:
               chr14:4109563-4109398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               31, 38
               

               Conread position:
               233-405
               

               Cow position:
               chr14:26628596-26628423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               233-407
               

               Cow position:
               chr14:15504229-15504053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               233-407
               

               Cow position:
               chr14:26655207-26655034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               233-426
               

               Cow position:
               chr14:7198425-7198622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               139, 176
               

               Conread position:
               235-349
               

               Cow position:
               chr14:3173808-3173694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-401
               

               Cow position:
               chr14:16834251-16834420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               235-401
               

               Cow position:
               chr14:37447534-37447374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               235-402
               

               Cow position:
               chr14:23424191-23424353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               235-402
               

               Cow position:
               chr14:23442952-23443114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr14:13809869-13810038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               138, 94
               

               Conread position:
               235-407
               

               Cow position:
               chr14:15039684-15039510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               138, 107
               

               Conread position:
               235-407
               

               Cow position:
               chr14:17841362-17841188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               145, 36
               

               Conread position:
               235-407
               

               Cow position:
               chr14:19594208-19594029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr14:25385957-25385785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               139, 72
               

               Conread position:
               235-407
               

               Cow position:
               chr14:28115257-28115085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               55, 26
               

               Conread position:
               235-407
               

               Cow position:
               chr14:38355117-38355287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               139, 104
               

               Conread position:
               235-407
               

               Cow position:
               chr14:41253063-41252888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               236-329
               

               Cow position:
               chr14:41267802-41267709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-400
               

               Cow position:
               chr14:36555216-36555062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               236-405
               

               Cow position:
               chr14:47510890-47511057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               7, 77
               

               Conread position:
               236-407
               

               Cow position:
               chr14:4877299-4877131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               236-407
               

               Cow position:
               chr14:16352279-16352446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               236-407
               

               Cow position:
               chr14:19394293-19394460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               237-407
               

               Cow position:
               chr14:1868869-1868696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               14, 145
               

               Conread position:
               237-407
               

               Cow position:
               chr14:13426781-13426947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               238-406
               

               Cow position:
               chr14:48412950-48412780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               238-407
               

               Cow position:
               chr14:25399001-25399174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               100, 95
               

               Conread position:
               242-407
               

               Cow position:
               chr14:803622-803788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               130, 59
               

               Conread position:
               242-407
               

               Cow position:
               chr14:10697565-10697405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               132, 14
               

               Conread position:
               243-376
               

               Cow position:
               chr14:2038871-2038738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               244-379
               

               Cow position:
               chr14:33643898-33644029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               244-383
               

               Cow position:
               chr14:40033933-40034068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               126, 67
               

               Conread position:
               244-386
               

               Cow position:
               chr14:12002841-12002975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               244-391
               

               Cow position:
               chr14:24839719-24839865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               142, 127
               

               Conread position:
               244-406
               

               Cow position:
               chr14:25403997-25403834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr14:39778690-39778856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               245-382
               

               Cow position:
               chr14:38286036-38285895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 121
               

               Conread position:
               246-407
               

               Cow position:
               chr14:49767403-49767567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               247-406
               

               Cow position:
               chr14:23712622-23712792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               249-407
               

               Cow position:
               chr14:40269897-40269742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               251-407
               

               Cow position:
               chr14:41180769-41180608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               251-407
               

               Cow position:
               chr14:41302885-41302732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               255-388
               

               Cow position:
               chr14:3665754-3665892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               256-407
               

               Cow position:
               chr14:22966706-22966853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               256-426
               

               Cow position:
               chr14:38378966-38379142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 143
               

               Conread position:
               259-381
               

               Cow position:
               chr14:32018062-32018184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               260-407
               

               Cow position:
               chr14:46061896-46062048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr14:33338521-33338373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               265-383
               

               Cow position:
               chr14:26499564-26499683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               267-407
               

               Cow position:
               chr14:3564245-3564382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               272-441
               

               Cow position:
               chr14:29029795-29029964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               104, 36
               

               Conread position:
               36-328
               

               Cow position:
               chr15:12693297-12693597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               79-385
               

               Cow position:
               chr15:27016401-27016124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               82-330
               

               Cow position:
               chr15:12442047-12441795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               86-400
               

               Cow position:
               chr15:17664423-17664108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               89-183
               

               Cow position:
               chr15:52791818-52791914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               82, 17
               

               Conread position:
               89-184
               

               Cow position:
               chr15:15147331-15147235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               89-199
               

               Cow position:
               chr15:25208882-25208772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               92, 97
               

               Conread position:
               89-204
               

               Cow position:
               chr15:18834478-18834363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               99, 90
               

               Conread position:
               89-342
               

               Cow position:
               chr15:13250947-13251188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               89-365
               

               Cow position:
               chr15:10431662-10431919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               8, 22
               

               Conread position:
               89-402
               

               Cow position:
               chr15:46868876-46868569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               291, 62
               

               Conread position:
               91-335
               

               Cow position:
               chr15:1984127-1984373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 88
               

               Conread position:
               94-208
               

               Cow position:
               chr15:21520024-21520135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-226
               

               Cow position:
               chr15:12656353-12656216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-226
               

               Cow position:
               chr15:47592806-47592678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-280
               

               Cow position:
               chr15:12323453-12323270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 84
               

               Conread position:
               94-343
               

               Cow position:
               chr15:24953688-24953439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               94-407
               

               Cow position:
               chr15:35441230-35440928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 42
               

               Conread position:
               95-338
               

               Cow position:
               chr15:52389493-52389735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               12, 117
               

               Conread position:
               95-400
               

               Cow position:
               chr15:36782482-36782185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               96-206
               

               Cow position:
               chr15:225919-225809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               90, 78
               

               Conread position:
               96-344
               

               Cow position:
               chr15:16703700-16703941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               96-407
               

               Cow position:
               chr15:10737896-10737599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 157
               

               Conread position:
               97-214
               

               Cow position:
               chr15:42415048-42415164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               109, 19
               

               Conread position:
               100-226
               

               Cow position:
               chr15:53811659-53811531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               100-399
               

               Cow position:
               chr15:10335621-10335896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               274, 78
               

               Conread position:
               101-225
               

               Cow position:
               chr15:16911911-16911791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               105-407
               

               Cow position:
               chr15:21389301-21389021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 64
               

               Conread position:
               106-380
               

               Cow position:
               chr15:51633226-51632942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               62, 220
               

               Conread position:
               114-369
               

               Cow position:
               chr15:5566781-5567034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               65, 131
               

               Conread position:
               116-365
               

               Cow position:
               chr15:21166550-21166319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               116-370
               

               Cow position:
               chr15:48590377-48590134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               116-383
               

               Cow position:
               chr15:5044615-5044350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 55
               

               Conread position:
               136-348
               

               Cow position:
               chr15:9483741-9483937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               139-298
               

               Cow position:
               chr15:42461994-42462151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               139-383
               

               Cow position:
               chr15:14261369-14261135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               139-407
               

               Cow position:
               chr15:43788132-43788399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               49, 179
               

               Conread position:
               140-405
               

               Cow position:
               chr15:23780187-23779926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 131
               

               Conread position:
               171-398
               

               Cow position:
               chr15:36388201-36388431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               171-407
               

               Cow position:
               chr15:26919367-26919128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 203
               

               Conread position:
               189-406
               

               Cow position:
               chr15:29330941-29331150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               185, 19
               

               Conread position:
               190-378
               

               Cow position:
               chr15:1284208-1284391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               190-407
               

               Cow position:
               chr15:38827390-38827177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               194-343
               

               Cow position:
               chr15:42190385-42190529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-356
               

               Cow position:
               chr15:52804724-52804564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               12, 60
               

               Conread position:
               194-399
               

               Cow position:
               chr15:42789217-42789008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               12, 189
               

               Conread position:
               194-406
               

               Cow position:
               chr15:17162131-17162337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               195-368
               

               Cow position:
               chr15:18776815-18776642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               195-376
               

               Cow position:
               chr15:33976760-33976573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 182
               

               Conread position:
               196-329
               

               Cow position:
               chr15:16911728-16911595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 5
               

               Conread position:
               196-407
               

               Cow position:
               chr15:6427691-6427483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               133, 10
               

               Conread position:
               197-390
               

               Cow position:
               chr15:39316903-39316710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               177, 9
               

               Conread position:
               197-399
               

               Cow position:
               chr15:44280041-44280242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               197-402
               

               Cow position:
               chr15:14281487-14281694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               198-403
               

               Cow position:
               chr15:47042691-47042484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               97, 8
               

               Conread position:
               198-407
               

               Cow position:
               chr15:13554292-13554501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               199-406
               

               Cow position:
               chr15:22871555-22871752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               205-351
               

               Cow position:
               chr15:12357567-12357709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               205-367
               

               Cow position:
               chr15:39520114-39520276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-387
               

               Cow position:
               chr15:5726269-5726452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               149
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               27, 173
               

               Conread position:
               205-403
               

               Cow position:
               chr15:12596-12795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 25
               

               Conread position:
               205-407
               

               Cow position:
               chr15:10442558-10442356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 143
               

               Conread position:
               205-407
               

               Cow position:
               chr15:12870918-12870717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr15:32977902-32977697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               206-356
               

               Cow position:
               chr15:44853192-44853341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 15
               

               Conread position:
               206-388
               

               Cow position:
               chr15:6037509-6037327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               13, 107
               

               Conread position:
               206-390
               

               Cow position:
               chr15:41582824-41583012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               206-406
               

               Cow position:
               chr15:35945480-35945675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               207-355
               

               Cow position:
               chr15:4500651-4500801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               207-407
               

               Cow position:
               chr15:12723039-12723234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               111, 25
               

               Conread position:
               207-410
               

               Cow position:
               chr15:31024939-31025142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               27, 134
               

               Conread position:
               209-373
               

               Cow position:
               chr15:24982230-24982064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               214-370
               

               Cow position:
               chr15:4248101-4248259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               214-406
               

               Cow position:
               chr15:31560434-31560250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               20, 96
               

               Conread position:
               214-407
               

               Cow position:
               chr15:24797850-24797664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               215-369
               

               Cow position:
               chr15:26529844-26530000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               215-407
               

               Cow position:
               chr15:22531622-22531809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               216-375
               

               Cow position:
               chr15:19402961-19403109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               7, 73
               

               Conread position:
               216-399
               

               Cow position:
               chr15:41087944-41087759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               216-407
               

               Cow position:
               chr15:22938806-22938615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               7, 177
               

               Conread position:
               216-407
               

               Cow position:
               chr15:44640855-44641044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               217-352
               

               Cow position:
               chr15:38196122-38195988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               7, 111
               

               Conread position:
               217-407
               

               Cow position:
               chr15:10088277-10088465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               218-407
               

               Cow position:
               chr15:5408939-5408757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               5, 106
               

               Conread position:
               218-407
               

               Cow position:
               chr15:16603784-16603970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               166, 121
               

               Conread position:
               219-359
               

               Cow position:
               chr15:40309353-40309491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               219-378
               

               Cow position:
               chr15:12913537-12913379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               125, 5
               

               Conread position:
               220-406
               

               Cow position:
               chr15:85283-85104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               221-390
               

               Cow position:
               chr15:4178984-4178812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               221-402
               

               Cow position:
               chr15:17337324-17337501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr15:49922096-49922283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               222-335
               

               Cow position:
               chr15:36450030-36450143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               96, 20
               

               Conread position:
               222-352
               

               Cow position:
               chr15:34223829-34223959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-366
               

               Cow position:
               chr15:4903957-4904096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               222-366
               

               Cow position:
               chr15:48095324-48095467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 96
               

               Conread position:
               222-381
               

               Cow position:
               chr15:9465640-9465799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               222-381
               

               Cow position:
               chr15:52432306-52432469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               222-383
               

               Cow position:
               chr15:29604737-29604576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-383
               

               Cow position:
               chr15:31495260-31495101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               222-388
               

               Cow position:
               chr15:36849141-36849309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 53
               

               Conread position:
               222-389
               

               Cow position:
               chr15:15154264-15154431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               150, 40
               

               Conread position:
               222-390
               

               Cow position:
               chr15:26158633-26158466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 36
               

               Conread position:
               222-400
               

               Cow position:
               chr15:6647413-6647594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               222-402
               

               Cow position:
               chr15:31928933-31928754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               148
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-405
               

               Cow position:
               chr15:43626433-43626613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr15:4418436-4418256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr15:5235034-5234855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               151
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr15:28823854-28823668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               119, 32
               

               Conread position:
               222-407
               

               Cow position:
               chr15:286441-286629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr15:1083407-1083228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr15:5683113-5683288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr15:6272924-6272740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               152, 31
               

               Conread position:
               222-407
               

               Cow position:
               chr15:13284989-13285166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr15:14176536-14176352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               155
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr15:16583727-16583550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr15:19186650-19186473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr15:21803694-21803513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               222-407
               

               Cow position:
               chr15:34139944-34140133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr15:38883112-38883299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               119, 90
               

               Conread position:
               222-407
               

               Cow position:
               chr15:39599411-39599589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               223-369
               

               Cow position:
               chr15:22444020-22443878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               223-379
               

               Cow position:
               chr15:44436717-44436870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               26, 41
               

               Conread position:
               223-397
               

               Cow position:
               chr15:25349936-25350107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               93, 32
               

               Conread position:
               223-405
               

               Cow position:
               chr15:36793530-36793341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr15:4919102-4918919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               158, 105
               

               Conread position:
               223-407
               

               Cow position:
               chr15:7429935-7430124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               91, 17
               

               Conread position:
               223-407
               

               Cow position:
               chr15:20459344-20459157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr15:20534486-20534296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               223-407
               

               Cow position:
               chr15:21941881-21941696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               151, 78
               

               Conread position:
               223-407
               

               Cow position:
               chr15:35641979-35642166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               106, 56
               

               Conread position:
               223-407
               

               Cow position:
               chr15:39405709-39405885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr15:53037001-53036820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               156, 86
               

               Conread position:
               224-385
               

               Cow position:
               chr15:5535395-5535233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               224-406
               

               Cow position:
               chr15:2141338-2141147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr15:2968302-2968485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               158, 96
               

               Conread position:
               224-407
               

               Cow position:
               chr15:9497535-9497352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr15:21420906-21421086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               157, 37
               

               Conread position:
               224-407
               

               Cow position:
               chr15:31857558-31857736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               225-331
               

               Cow position:
               chr15:12966613-12966715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               225-392
               

               Cow position:
               chr15:2799948-2800114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               129, 7
               

               Conread position:
               225-403
               

               Cow position:
               chr15:26573346-26573521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               225-407
               

               Cow position:
               chr15:915875-915698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               226-383
               

               Cow position:
               chr15:16307388-16307545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 56
               

               Conread position:
               226-407
               

               Cow position:
               chr15:1804371-1804188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               74, 135
               

               Conread position:
               226-407
               

               Cow position:
               chr15:34207220-34207042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               153, 104
               

               Conread position:
               226-437
               

               Cow position:
               chr15:29810089-29810296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               228-401
               

               Cow position:
               chr15:19771105-19771273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               230-400
               

               Cow position:
               chr15:9781442-9781606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               230-407
               

               Cow position:
               chr15:16928123-16927949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               230-407
               

               Cow position:
               chr15:19920362-19920187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 115
               

               Conread position:
               231-347
               

               Cow position:
               chr15:29793221-29793105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-356
               

               Cow position:
               chr15:20488115-20487989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               231-357
               

               Cow position:
               chr15:36458230-36458104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-361
               

               Cow position:
               chr15:3690322-3690452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-371
               

               Cow position:
               chr15:6128991-6128854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               106, 34
               

               Conread position:
               231-372
               

               Cow position:
               chr15:40368262-40368403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-376
               

               Cow position:
               chr15:24031171-24031317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               231-377
               

               Cow position:
               chr15:24629393-24629247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr15:25650438-25650289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr15:41000097-40999945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               139, 9
               

               Conread position:
               231-384
               

               Cow position:
               chr15:20856504-20856349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               231-386
               

               Cow position:
               chr15:10858076-10858237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               231-387
               

               Cow position:
               chr15:12001570-12001421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr15:25386411-25386574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               48, 130
               

               Conread position:
               231-390
               

               Cow position:
               chr15:28924783-28924621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-400
               

               Cow position:
               chr15:16112372-16112542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 43
               

               Conread position:
               231-400
               

               Cow position:
               chr15:16908405-16908574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-400
               

               Cow position:
               chr15:22939353-22939182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               231-400
               

               Cow position:
               chr15:39286436-39286270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               231-400
               

               Cow position:
               chr15:43673972-43673795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 154
               

               Conread position:
               231-403
               

               Cow position:
               chr15:17100737-17100567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr15:1330131-1329955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               143, 162
               

               Conread position:
               231-407
               

               Cow position:
               chr15:5158346-5158522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               150, 164
               

               Conread position:
               231-407
               

               Cow position:
               chr15:5717685-5717860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               143, 35
               

               Conread position:
               231-407
               

               Cow position:
               chr15:5929869-5930038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               231-407
               

               Cow position:
               chr15:16667523-16667351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               143, 58
               

               Conread position:
               231-407
               

               Cow position:
               chr15:21821952-21821778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr15:21893751-21893929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               147
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               143, 86
               

               Conread position:
               231-407
               

               Cow position:
               chr15:23572714-23572537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               142, 124
               

               Conread position:
               231-407
               

               Cow position:
               chr15:26912100-26911929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr15:27900538-27900361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               155, 98
               

               Conread position:
               231-407
               

               Cow position:
               chr15:27973245-27973070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               231-407
               

               Cow position:
               chr15:35205180-35205001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               99, 23
               

               Conread position:
               231-407
               

               Cow position:
               chr15:36391646-36391822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               231-407
               

               Cow position:
               chr15:39621310-39621488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr15:41624922-41624740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr15:52454403-52454580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               54, 163
               

               Conread position:
               231-434
               

               Cow position:
               chr15:43114749-43114547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               231-444
               

               Cow position:
               chr15:795050-794831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               21, 205
               

               Conread position:
               232-365
               

               Cow position:
               chr15:19002307-19002170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               232-387
               

               Cow position:
               chr15:10880918-10880757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               232-391
               

               Cow position:
               chr15:2145165-2145005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               85, 108
               

               Conread position:
               232-405
               

               Cow position:
               chr15:20370482-20370311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               100, 142
               

               Conread position:
               232-405
               

               Cow position:
               chr15:31042841-31043015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               232-407
               

               Cow position:
               chr15:22136663-22136833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               138, 80
               

               Conread position:
               232-407
               

               Cow position:
               chr15:41527999-41527829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr15:49273932-49274099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               232-410
               

               Cow position:
               chr15:23798557-23798374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               233-373
               

               Cow position:
               chr15:16616166-16616300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               31, 80
               

               Conread position:
               233-386
               

               Cow position:
               chr15:38652626-38652475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               233-386
               

               Cow position:
               chr15:52878251-52878403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               73, 100
               

               Conread position:
               233-388
               

               Cow position:
               chr15:29541852-29542007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               141, 23
               

               Conread position:
               233-400
               

               Cow position:
               chr15:12785404-12785566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               233-400
               

               Cow position:
               chr15:32324231-32324064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               145, 81
               

               Conread position:
               233-403
               

               Cow position:
               chr15:19553949-19553779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               106, 9
               

               Conread position:
               233-403
               

               Cow position:
               chr15:28047788-28047611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               7, 48
               

               Conread position:
               233-407
               

               Cow position:
               chr15:6905507-6905682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr15:28258483-28258308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               233-407
               

               Cow position:
               chr15:44658337-44658504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               234-375
               

               Cow position:
               chr15:4485129-4485271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               234-380
               

               Cow position:
               chr15:23719508-23719363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr15:19950454-19950623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               137, 46
               

               Conread position:
               234-407
               

               Cow position:
               chr15:34284436-34284263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               46, 138
               

               Conread position:
               234-448
               

               Cow position:
               chr15:45584708-45584911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               235-339
               

               Cow position:
               chr15:16230198-16230302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-372
               

               Cow position:
               chr15:30981916-30982052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               235-378
               

               Cow position:
               chr15:14020461-14020604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-405
               

               Cow position:
               chr15:11559379-11559210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               145, 156
               

               Conread position:
               235-406
               

               Cow position:
               chr15:9971002-9970829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               139, 95
               

               Conread position:
               235-407
               

               Cow position:
               chr15:4138111-4138280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               235-407
               

               Cow position:
               chr15:22553565-22553391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               136, 77
               

               Conread position:
               235-407
               

               Cow position:
               chr15:50177085-50177260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               235-441
               

               Cow position:
               chr15:11996050-11995846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               174, 18
               

               Conread position:
               236-380
               

               Cow position:
               chr15:7192285-7192145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               236-396
               

               Cow position:
               chr15:37205025-37205182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               236-400
               

               Cow position:
               chr15:17196125-17196283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr15:662491-662321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               237-388
               

               Cow position:
               chr15:31637279-31637433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               237-407
               

               Cow position:
               chr15:20422800-20422632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               14, 21
               

               Conread position:
               237-407
               

               Cow position:
               chr15:39326539-39326367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               53, 112
               

               Conread position:
               238-407
               

               Cow position:
               chr15:15573856-15573683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               74, 119
               

               Conread position:
               238-445
               

               Cow position:
               chr15:43599168-43599372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               142, 133
               

               Conread position:
               239-407
               

               Cow position:
               chr15:26903171-26903344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               135, 20
               

               Conread position:
               239-407
               

               Cow position:
               chr15:50322574-50322743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr15:20351816-20351978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               244-398
               

               Cow position:
               chr15:23768272-23768120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               244-405
               

               Cow position:
               chr15:47843266-47843102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               247-402
               

               Cow position:
               chr15:225816-225660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               251-406
               

               Cow position:
               chr15:4534903-4535057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               123, 48
               

               Conread position:
               253-407
               

               Cow position:
               chr15:4508141-4508296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               253-407
               

               Cow position:
               chr15:5727649-5727802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               253-407
               

               Cow position:
               chr15:35417631-35417480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               254-441
               

               Cow position:
               chr15:16639772-16639961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               77, 129
               

               Conread position:
               256-386
               

               Cow position:
               chr15:38845898-38846029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               257-407
               

               Cow position:
               chr15:36618100-36618250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr15:6969989-6970136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               265-405
               

               Cow position:
               chr15:4461041-4460901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               117, 43
               

               Conread position:
               72-407
               

               Cow position:
               chr16:7456197-7456516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               81-226
               

               Cow position:
               chr16:20025747-20025606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               83-381
               

               Cow position:
               chr16:24403190-24403459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               223
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               84-369
               

               Cow position:
               chr16:5727173-5726914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               86-181
               

               Cow position:
               chr16:4911234-4911329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               11, 93
               

               Conread position:
               86-181
               

               Cow position:
               chr16:30613006-30613101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               22, 93
               

               Conread position:
               86-184
               

               Cow position:
               chr16:7665856-7665757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               86-372
               

               Cow position:
               chr16:6310449-6310724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 93
               

               Conread position:
               87-345
               

               Cow position:
               chr16:51620228-51620476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               87-407
               

               Cow position:
               chr16:17627166-17626872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               236
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               198, 42
               

               Conread position:
               88-407
               

               Cow position:
               chr16:39646826-39646486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               89-177
               

               Cow position:
               chr16:8809884-8809972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               76
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               89-190
               

               Cow position:
               chr16:8953461-8953561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               89-228
               

               Cow position:
               chr16:12091440-12091574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               89-272
               

               Cow position:
               chr16:12414281-12414464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               7, 143
               

               Conread position:
               90-340
               

               Cow position:
               chr16:52705832-52706067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               17, 80
               

               Conread position:
               90-407
               

               Cow position:
               chr16:30142960-30143263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               106, 11
               

               Conread position:
               93-372
               

               Cow position:
               chr16:11391161-11390880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               93-407
               

               Cow position:
               chr16:11102580-11102881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               274, 78
               

               Conread position:
               94-212
               

               Cow position:
               chr16:44568798-44568915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               94-241
               

               Cow position:
               chr16:18429796-18429649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               125, 91
               

               Conread position:
               94-343
               

               Cow position:
               chr16:41038226-41037987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               81, 85
               

               Conread position:
               94-370
               

               Cow position:
               chr16:55592802-55592543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               94-372
               

               Cow position:
               chr16:39202396-39202117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               94-386
               

               Cow position:
               chr16:17291775-17292061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               145, 63
               

               Conread position:
               94-407
               

               Cow position:
               chr16:7550219-7549908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 104
               

               Conread position:
               94-407
               

               Cow position:
               chr16:43675151-43674816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 262
               

               Conread position:
               95-190
               

               Cow position:
               chr16:56248726-56248821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               91, 83
               

               Conread position:
               95-366
               

               Cow position:
               chr16:50286765-50286496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 38
               

               Conread position:
               95-408
               

               Cow position:
               chr16:6319437-6319141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 75
               

               Conread position:
               96-304
               

               Cow position:
               chr16:48099706-48099505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               96-407
               

               Cow position:
               chr16:54084291-54083977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               135, 82
               

               Conread position:
               97-353
               

               Cow position:
               chr16:16945051-16945302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               152, 81
               

               Conread position:
               99-331
               

               Cow position:
               chr16:11922802-11923010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               160, 66
               

               Conread position:
               101-203
               

               Cow position:
               chr16:20749412-20749309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               85, 75
               

               Conread position:
               101-212
               

               Cow position:
               chr16:11083197-11083083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               101-280
               

               Cow position:
               chr16:39238501-39238323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               104, 77
               

               Conread position:
               101-348
               

               Cow position:
               chr16:53614326-53614097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               101-388
               

               Cow position:
               chr16:13726071-13725789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 14
               

               Conread position:
               101-407
               

               Cow position:
               chr16:7499301-7499002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               102-206
               

               Cow position:
               chr16:30358707-30358811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               102-389
               

               Cow position:
               chr16:56843908-56844187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               15, 70
               

               Conread position:
               102-407
               

               Cow position:
               chr16:28834072-28833778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               270, 57
               

               Conread position:
               106-331
               

               Cow position:
               chr16:33752958-33752751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               111-344
               

               Cow position:
               chr16:52803725-52803952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               215, 52
               

               Conread position:
               116-391
               

               Cow position:
               chr16:6213824-6213559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               92, 38
               

               Conread position:
               116-403
               

               Cow position:
               chr16:30135689-30135948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               265, 32
               

               Conread position:
               118-407
               

               Cow position:
               chr16:496149-496434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               122-361
               

               Cow position:
               chr16:9279897-9280129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               139-386
               

               Cow position:
               chr16:13414434-13414704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               140-413
               

               Cow position:
               chr16:12010310-12010033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               149-405
               

               Cow position:
               chr16:23955634-23955887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               149-406
               

               Cow position:
               chr16:17135922-17135670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               149-407
               

               Cow position:
               chr16:33530605-33530354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               149-407
               

               Cow position:
               chr16:35297282-35297009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               151-366
               

               Cow position:
               chr16:22824641-22824851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               154-404
               

               Cow position:
               chr16:33135135-33134886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 20
               

               Conread position:
               161-356
               

               Cow position:
               chr16:12454601-12454796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               161-407
               

               Cow position:
               chr16:26030704-26030943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               162-383
               

               Cow position:
               chr16:8205898-8206107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               162-405
               

               Cow position:
               chr16:9161269-9161022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               210, 15
               

               Conread position:
               168-370
               

               Cow position:
               chr16:6270136-6269928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               168-406
               

               Cow position:
               chr16:12634069-12633830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               168-407
               

               Cow position:
               chr16:12500975-12501219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               20, 134
               

               Conread position:
               168-407
               

               Cow position:
               chr16:22804416-22804657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               171-339
               

               Cow position:
               chr16:34433344-34433516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 7
               

               Conread position:
               171-373
               

               Cow position:
               chr16:55968617-55968418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               171-380
               

               Cow position:
               chr16:34291112-34291322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               172-332
               

               Cow position:
               chr16:27032752-27032593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               52, 26
               

               Conread position:
               174-353
               

               Cow position:
               chr16:6378949-6379128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 9
               

               Conread position:
               177-383
               

               Cow position:
               chr16:56875489-56875696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               10, 80
               

               Conread position:
               178-407
               

               Cow position:
               chr16:41689862-41689638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               184-406
               

               Cow position:
               chr16:9500690-9500459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               22, 218
               

               Conread position:
               185-404
               

               Cow position:
               chr16:31162966-31163182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               150, 41
               

               Conread position:
               187-368
               

               Cow position:
               chr16:48448882-48448704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               188-380
               

               Cow position:
               chr16:4736428-4736615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               188-407
               

               Cow position:
               chr16:18141167-18141387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               190-407
               

               Cow position:
               chr16:25839781-25839560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               191-370
               

               Cow position:
               chr16:12097798-12097620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               191-400
               

               Cow position:
               chr16:43105355-43105566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               192-370
               

               Cow position:
               chr16:1415142-1415319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               10, 124
               

               Conread position:
               194-368
               

               Cow position:
               chr16:14046375-14046542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 94
               

               Conread position:
               194-403
               

               Cow position:
               chr16:9973343-9973553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr16:3634270-3634052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               168, 12
               

               Conread position:
               196-407
               

               Cow position:
               chr16:13611303-13611512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               196-407
               

               Cow position:
               chr16:18353805-18354015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               196-407
               

               Cow position:
               chr16:44683507-44683720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               121, 10
               

               Conread position:
               197-343
               

               Cow position:
               chr16:20265412-20265557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               197-373
               

               Cow position:
               chr16:50282279-50282457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               197-407
               

               Cow position:
               chr16:38905090-38905287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               197-407
               

               Cow position:
               chr16:52133367-52133571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               197-441
               

               Cow position:
               chr16:4971887-4972112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               198-445
               

               Cow position:
               chr16:22841910-22842154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               184, 8
               

               Conread position:
               200-380
               

               Cow position:
               chr16:10945294-10945468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               201-375
               

               Cow position:
               chr16:45044963-45044792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               5, 132
               

               Conread position:
               201-407
               

               Cow position:
               chr16:43276164-43275963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               5, 29
               

               Conread position:
               202-407
               

               Cow position:
               chr16:15960143-15960350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               204-372
               

               Cow position:
               chr16:18048011-18048178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               205-337
               

               Cow position:
               chr16:11019376-11019504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               124, 25
               

               Conread position:
               205-381
               

               Cow position:
               chr16:30174388-30174558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               205-407
               

               Cow position:
               chr16:8273694-8273896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               167, 175
               

               Conread position:
               205-407
               

               Cow position:
               chr16:31348622-31348826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               118, 93
               

               Conread position:
               205-407
               

               Cow position:
               chr16:33869628-33869819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr16:50453911-50453704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               21, 118
               

               Conread position:
               206-316
               

               Cow position:
               chr16:23187687-23187577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               206-377
               

               Cow position:
               chr16:15905109-15905278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               206-381
               

               Cow position:
               chr16:46548128-46548300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr16:7619040-7619236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               206-407
               

               Cow position:
               chr16:54734383-54734187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               207-407
               

               Cow position:
               chr16:47303983-47304183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               208-405
               

               Cow position:
               chr16:17143072-17142882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               210-406
               

               Cow position:
               chr16:8193593-8193393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 66
               

               Conread position:
               210-441
               

               Cow position:
               chr16:42444294-42444064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               207, 33
               

               Conread position:
               211-379
               

               Cow position:
               chr16:41530162-41530329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               211-390
               

               Cow position:
               chr16:45122174-45121991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               212-407
               

               Cow position:
               chr16:56796529-56796724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               214-387
               

               Cow position:
               chr16:53508850-53509023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               20, 7
               

               Conread position:
               214-398
               

               Cow position:
               chr16:28395948-28396133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               164, 19
               

               Conread position:
               214-404
               

               Cow position:
               chr16:47964685-47964871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               214-406
               

               Cow position:
               chr16:22773115-22772920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               20, 169
               

               Conread position:
               214-407
               

               Cow position:
               chr16:42733876-42734074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               37, 45
               

               Conread position:
               214-407
               

               Cow position:
               chr16:50931391-50931575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               215-347
               

               Cow position:
               chr16:11653271-11653140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               215-358
               

               Cow position:
               chr16:9836640-9836782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               88, 107
               

               Conread position:
               215-368
               

               Cow position:
               chr16:13252178-13252325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               215-403
               

               Cow position:
               chr16:45554575-45554388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               113, 15
               

               Conread position:
               215-407
               

               Cow position:
               chr16:18206096-18205902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 140
               

               Conread position:
               215-407
               

               Cow position:
               chr16:48385272-48385459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               159, 15
               

               Conread position:
               216-376
               

               Cow position:
               chr16:11359282-11359124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-388
               

               Cow position:
               chr16:49860367-49860195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               111, 7
               

               Conread position:
               216-404
               

               Cow position:
               chr16:36203485-36203680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 41
               

               Conread position:
               216-407
               

               Cow position:
               chr16:11083131-11082944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               7, 64
               

               Conread position:
               216-407
               

               Cow position:
               chr16:22380220-22380412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 7
               

               Conread position:
               216-407
               

               Cow position:
               chr16:51598479-51598664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 116
               

               Conread position:
               216-445
               

               Cow position:
               chr16:44210424-44210660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               7, 27
               

               Conread position:
               217-405
               

               Cow position:
               chr16:7429511-7429321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               34, 42
               

               Conread position:
               217-407
               

               Cow position:
               chr16:17982013-17982200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               153, 22
               

               Conread position:
               218-399
               

               Cow position:
               chr16:7505216-7505037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               5, 68
               

               Conread position:
               218-407
               

               Cow position:
               chr16:42241988-42242174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               219-348
               

               Cow position:
               chr16:43758515-43758645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               219-407
               

               Cow position:
               chr16:11008463-11008285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               155, 16
               

               Conread position:
               219-407
               

               Cow position:
               chr16:35623122-35623301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               220-406
               

               Cow position:
               chr16:30036861-30037049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               220-407
               

               Cow position:
               chr16:2223268-2223460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               220-407
               

               Cow position:
               chr16:29766455-29766279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               57, 104
               

               Conread position:
               221-385
               

               Cow position:
               chr16:55945011-55945175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               22, 150
               

               Conread position:
               221-407
               

               Cow position:
               chr16:21317465-21317656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               222-352
               

               Cow position:
               chr16:19053756-19053886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-371
               

               Cow position:
               chr16:29026332-29026186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-372
               

               Cow position:
               chr16:11390158-11390309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               222-379
               

               Cow position:
               chr16:17283574-17283417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               85, 150
               

               Conread position:
               222-391
               

               Cow position:
               chr16:49229644-49229810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               222-398
               

               Cow position:
               chr16:15953692-15953872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               222-402
               

               Cow position:
               chr16:19644015-19643832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               96, 31
               

               Conread position:
               222-404
               

               Cow position:
               chr16:9830571-9830391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               222-404
               

               Cow position:
               chr16:11584278-11584453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 53
               

               Conread position:
               222-404
               

               Cow position:
               chr16:31117488-31117670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               166, 121
               

               Conread position:
               222-406
               

               Cow position:
               chr16:7702646-7702472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               152, 78
               

               Conread position:
               222-406
               

               Cow position:
               chr16:23681489-23681308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               151, 84
               

               Conread position:
               222-406
               

               Cow position:
               chr16:46552920-46552745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr16:5364028-5363837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr16:13306745-13306926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr16:14754196-14754381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               87, 159
               

               Conread position:
               222-407
               

               Cow position:
               chr16:16402206-16402379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               222-407
               

               Cow position:
               chr16:16548736-16548551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               222-407
               

               Cow position:
               chr16:17282785-17282604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               148, 90
               

               Conread position:
               222-407
               

               Cow position:
               chr16:18757712-18757898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               150, 120
               

               Conread position:
               222-407
               

               Cow position:
               chr16:19670226-19670408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr16:20872148-20871966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               222-407
               

               Cow position:
               chr16:36286558-36286741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               152, 13
               

               Conread position:
               222-407
               

               Cow position:
               chr16:48545948-48545762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr16:51112753-51112935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr16:54664672-54664859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               60, 97
               

               Conread position:
               222-419
               

               Cow position:
               chr16:45785864-45785665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               151, 195
               

               Conread position:
               222-420
               

               Cow position:
               chr16:12077360-12077549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               223-331
               

               Cow position:
               chr16:9097149-9097041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-338
               

               Cow position:
               chr16:7611989-7611874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-346
               

               Cow position:
               chr16:28199154-28199032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               223-370
               

               Cow position:
               chr16:35297527-35297385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               122, 47
               

               Conread position:
               223-372
               

               Cow position:
               chr16:258160-258302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               223-372
               

               Cow position:
               chr16:22329287-22329138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-377
               

               Cow position:
               chr16:15254631-15254781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               223-383
               

               Cow position:
               chr16:22738400-22738245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               151, 29
               

               Conread position:
               223-385
               

               Cow position:
               chr16:20205587-20205425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-388
               

               Cow position:
               chr16:44138367-44138531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               155, 88
               

               Conread position:
               223-396
               

               Cow position:
               chr16:25154617-25154795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               77, 47
               

               Conread position:
               223-407
               

               Cow position:
               chr16:820380-820190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               155
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr16:3614867-3614687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               17, 77
               

               Conread position:
               223-407
               

               Cow position:
               chr16:7665763-7665578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               223-407
               

               Cow position:
               chr16:8522264-8522451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr16:15370812-15370624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr16:22984879-22984699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr16:29038040-29037853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               149, 33
               

               Conread position:
               223-407
               

               Cow position:
               chr16:35188375-35188196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr16:37452488-37452674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr16:38663585-38663768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               158, 80
               

               Conread position:
               223-407
               

               Cow position:
               chr16:40700611-40700787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               151, 36
               

               Conread position:
               223-407
               

               Cow position:
               chr16:42633618-42633809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               145, 119
               

               Conread position:
               223-407
               

               Cow position:
               chr16:48145277-48145461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               103, 57
               

               Conread position:
               223-407
               

               Cow position:
               chr16:56082239-56082421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               224-352
               

               Cow position:
               chr16:51382498-51382623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               224-376
               

               Cow position:
               chr16:12939745-12939592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               125, 96
               

               Conread position:
               224-381
               

               Cow position:
               chr16:9578367-9578524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               148, 65
               

               Conread position:
               224-403
               

               Cow position:
               chr16:33405369-33405550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr16:30186767-30186585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               224-407
               

               Cow position:
               chr16:30358938-30359119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               224-408
               

               Cow position:
               chr16:28444365-28444548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               150, 168
               

               Conread position:
               225-371
               

               Cow position:
               chr16:56265624-56265480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               225-404
               

               Cow position:
               chr16:26649505-26649685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               149, 167
               

               Conread position:
               225-407
               

               Cow position:
               chr16:48006369-48006551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               226-331
               

               Cow position:
               chr16:16280250-16280355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               226-371
               

               Cow position:
               chr16:7496377-7496235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               226-381
               

               Cow position:
               chr16:29655448-29655294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               226-389
               

               Cow position:
               chr16:8673490-8673652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               112, 21
               

               Conread position:
               226-406
               

               Cow position:
               chr16:39165361-39165184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               146
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr16:8076379-8076566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr16:14685267-14685448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 148
               

               Conread position:
               228-337
               

               Cow position:
               chr16:50569384-50569276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               230-383
               

               Cow position:
               chr16:53086222-53086373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               132, 107
               

               Conread position:
               230-384
               

               Cow position:
               chr16:12324574-12324420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               230-400
               

               Cow position:
               chr16:4698871-4699036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               230-407
               

               Cow position:
               chr16:21905265-21905105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               144, 41
               

               Conread position:
               230-407
               

               Cow position:
               chr16:50688640-50688463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-335
               

               Cow position:
               chr16:33290502-33290398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-338
               

               Cow position:
               chr16:4102713-4102820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-343
               

               Cow position:
               chr16:15203251-15203363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-353
               

               Cow position:
               chr16:30908828-30908951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               231-353
               

               Cow position:
               chr16:34412926-34412805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               231-364
               

               Cow position:
               chr16:5382301-5382163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               231-364
               

               Cow position:
               chr16:12220799-12220666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-367
               

               Cow position:
               chr16:8065529-8065668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               231-368
               

               Cow position:
               chr16:9596488-9596351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-368
               

               Cow position:
               chr16:13996078-13996214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-377
               

               Cow position:
               chr16:40745241-40745387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-379
               

               Cow position:
               chr16:15023513-15023661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-380
               

               Cow position:
               chr16:44713362-44713511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               33, 59
               

               Conread position:
               231-380
               

               Cow position:
               chr16:51697203-51697052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               231-382
               

               Cow position:
               chr16:7812808-7812657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-383
               

               Cow position:
               chr16:9560377-9560528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               231-386
               

               Cow position:
               chr16:45046956-45046801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               78, 93
               

               Conread position:
               231-387
               

               Cow position:
               chr16:15407441-15407595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               231-387
               

               Cow position:
               chr16:30027991-30027836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               122, 136
               

               Conread position:
               231-391
               

               Cow position:
               chr16:20648030-20647878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               102, 61
               

               Conread position:
               231-400
               

               Cow position:
               chr16:48086752-48086921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               149, 37
               

               Conread position:
               231-402
               

               Cow position:
               chr16:10366042-10365865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               102, 81
               

               Conread position:
               231-405
               

               Cow position:
               chr16:9497149-9497323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr16:26676568-26676743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               231-406
               

               Cow position:
               chr16:53830474-53830643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               149, 81
               

               Conread position:
               231-406
               

               Cow position:
               chr16:56565714-56565540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               83, 146
               

               Conread position:
               231-407
               

               Cow position:
               chr16:4910407-4910585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr16:8018086-8017909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               89, 163
               

               Conread position:
               231-407
               

               Cow position:
               chr16:8025737-8025908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr16:8933310-8933482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr16:10773239-10773074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr16:13578743-13578920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr16:22919585-22919408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               143, 122
               

               Conread position:
               231-407
               

               Cow position:
               chr16:29557507-29557686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               31, 86
               

               Conread position:
               231-407
               

               Cow position:
               chr16:38243545-38243720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr16:40514364-40514539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               149, 138
               

               Conread position:
               231-407
               

               Cow position:
               chr16:42340314-42340137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr16:44429001-44428821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr16:48340576-48340755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               145, 165
               

               Conread position:
               231-407
               

               Cow position:
               chr16:49169263-49169443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr16:50289268-50289091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               143, 30
               

               Conread position:
               231-407
               

               Cow position:
               chr16:54226482-54226657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               143, 81
               

               Conread position:
               231-445
               

               Cow position:
               chr16:51869757-51869545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               178, 161
               

               Conread position:
               232-383
               

               Cow position:
               chr16:52854905-52855065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               62, 148
               

               Conread position:
               232-386
               

               Cow position:
               chr16:56665692-56665536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               232-389
               

               Cow position:
               chr16:30715621-30715460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               232-390
               

               Cow position:
               chr16:13712816-13712973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               232-398
               

               Cow position:
               chr16:34753843-34754010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               142, 162
               

               Conread position:
               232-403
               

               Cow position:
               chr16:29677517-29677686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr16:4192317-4192483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr16:4399852-4399678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr16:14242485-14242312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               142, 64
               

               Conread position:
               232-407
               

               Cow position:
               chr16:20633759-20633937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               61, 113
               

               Conread position:
               232-407
               

               Cow position:
               chr16:34220303-34220125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               142, 164
               

               Conread position:
               232-407
               

               Cow position:
               chr16:46452626-46452804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr16:56670802-56670979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               120, 150
               

               Conread position:
               233-380
               

               Cow position:
               chr16:45943650-45943805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               233-384
               

               Cow position:
               chr16:11957462-11957612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               233-386
               

               Cow position:
               chr16:22323695-22323854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               93, 145
               

               Conread position:
               233-400
               

               Cow position:
               chr16:8441692-8441857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               233-407
               

               Cow position:
               chr16:591691-591869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 174
               

               Conread position:
               233-407
               

               Cow position:
               chr16:25380379-25380552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               99, 139
               

               Conread position:
               233-407
               

               Cow position:
               chr16:32301890-32302063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               83, 139
               

               Conread position:
               234-390
               

               Cow position:
               chr16:11916094-11916255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               37, 98
               

               Conread position:
               234-407
               

               Cow position:
               chr16:7583512-7583339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               140, 159
               

               Conread position:
               235-371
               

               Cow position:
               chr16:50677983-50677840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               235-387
               

               Cow position:
               chr16:40446378-40446226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               14, 80
               

               Conread position:
               235-389
               

               Cow position:
               chr16:27723338-27723183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               145, 118
               

               Conread position:
               235-393
               

               Cow position:
               chr16:8438538-8438693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               93, 140
               

               Conread position:
               235-407
               

               Cow position:
               chr16:1220065-1220241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               134, 82
               

               Conread position:
               235-407
               

               Cow position:
               chr16:8322869-8323041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               146, 19
               

               Conread position:
               235-407
               

               Cow position:
               chr16:8768907-8768744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr16:14974430-14974593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr16:15809092-15808916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               101, 112
               

               Conread position:
               235-407
               

               Cow position:
               chr16:26372837-26373007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr16:42432997-42433174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr16:43505697-43505861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr16:48493294-48493120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               235-411
               

               Cow position:
               chr16:12687998-12688171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               236-405
               

               Cow position:
               chr16:23738294-23738122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr16:8448542-8448706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr16:23366353-23366186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               236-411
               

               Cow position:
               chr16:51043765-51043589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               137, 75
               

               Conread position:
               236-441
               

               Cow position:
               chr16:23472861-23472656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               146, 17
               

               Conread position:
               237-407
               

               Cow position:
               chr16:22327622-22327441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               96, 147
               

               Conread position:
               238-406
               

               Cow position:
               chr16:27160753-27160923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               238-407
               

               Cow position:
               chr16:10148393-10148222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               242-384
               

               Cow position:
               chr16:29096028-29095892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               242-385
               

               Cow position:
               chr16:11477972-11478110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               134, 14
               

               Conread position:
               242-388
               

               Cow position:
               chr16:50409352-50409207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               7, 16
               

               Conread position:
               242-406
               

               Cow position:
               chr16:44580965-44581132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               242-407
               

               Cow position:
               chr16:16565227-16565063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               243-397
               

               Cow position:
               chr16:15726254-15726407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               5, 14
               

               Conread position:
               243-404
               

               Cow position:
               chr16:50667397-50667230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               243-406
               

               Cow position:
               chr16:42176751-42176587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               128, 13
               

               Conread position:
               243-407
               

               Cow position:
               chr16:16597663-16597502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr16:36120877-36121038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr16:38091117-38091283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               130, 43
               

               Conread position:
               243-407
               

               Cow position:
               chr16:53627322-53627486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               246-371
               

               Cow position:
               chr16:8030882-8030757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               247-406
               

               Cow position:
               chr16:14758837-14758676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               126, 65
               

               Conread position:
               247-406
               

               Cow position:
               chr16:52889310-52889468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               134, 9
               

               Conread position:
               250-406
               

               Cow position:
               chr16:13648426-13648279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               252-407
               

               Cow position:
               chr16:11774951-11775107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               48, 123
               

               Conread position:
               252-407
               

               Cow position:
               chr16:31426439-31426285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               253-383
               

               Cow position:
               chr16:30940039-30939911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               100, 55
               

               Conread position:
               254-381
               

               Cow position:
               chr16:27261856-27261979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               255-407
               

               Cow position:
               chr16:50521570-50521419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               256-379
               

               Cow position:
               chr16:32327751-32327629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               258-407
               

               Cow position:
               chr16:35758293-35758146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               122, 112
               

               Conread position:
               261-386
               

               Cow position:
               chr16:53408842-53408966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               264-373
               

               Cow position:
               chr16:12503136-12503030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               264-407
               

               Cow position:
               chr16:9933241-9933100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               108, 12
               

               Conread position:
               277-405
               

               Cow position:
               chr16:24672286-24672413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               104, 35
               

               Conread position:
               54-323
               

               Cow position:
               chr17:12088623-12088370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               83-362
               

               Cow position:
               chr17:5742997-5743264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               84-331
               

               Cow position:
               chr17:21206208-21206445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 96
               

               Conread position:
               86-407
               

               Cow position:
               chr17:21604715-21604396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               87-403
               

               Cow position:
               chr17:8823601-8823295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               77, 33
               

               Conread position:
               88-203
               

               Cow position:
               chr17:40243458-40243343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               100, 88
               

               Conread position:
               88-402
               

               Cow position:
               chr17:22016810-22017100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               89-199
               

               Cow position:
               chr17:21466005-21466118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               89-211
               

               Cow position:
               chr17:24766670-24766796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               89-399
               

               Cow position:
               chr17:29157713-29157405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               15, 94
               

               Conread position:
               89-407
               

               Cow position:
               chr17:9117934-9117629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               94-347
               

               Cow position:
               chr17:25159548-25159802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 37
               

               Conread position:
               94-390
               

               Cow position:
               chr17:25796022-25796337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               9, 184
               

               Conread position:
               95-199
               

               Cow position:
               chr17:31480783-31480884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               95-370
               

               Cow position:
               chr17:25193250-25193508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               95-407
               

               Cow position:
               chr17:15299603-15299892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               76, 84
               

               Conread position:
               96-225
               

               Cow position:
               chr17:4813884-4814013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               90, 82
               

               Conread position:
               97-331
               

               Cow position:
               chr17:39768324-39768103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               97-358
               

               Cow position:
               chr17:42744737-42744486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               248, 8
               

               Conread position:
               97-407
               

               Cow position:
               chr17:38990396-38990086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               91, 28
               

               Conread position:
               99-190
               

               Cow position:
               chr17:9858909-9858818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-199
               

               Cow position:
               chr17:1364853-1364755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               100-310
               

               Cow position:
               chr17:10510192-10510393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 79
               

               Conread position:
               100-407
               

               Cow position:
               chr17:8079588-8079299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               100-407
               

               Cow position:
               chr17:9487561-9487283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               100-407
               

               Cow position:
               chr17:28814227-28814517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 34
               

               Conread position:
               101-219
               

               Cow position:
               chr17:41912856-41912737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               87, 77
               

               Conread position:
               101-221
               

               Cow position:
               chr17:10234564-10234680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               101-239
               

               Cow position:
               chr17:23736966-23736828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               105, 77
               

               Conread position:
               101-273
               

               Cow position:
               chr17:40793504-40793331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               122, 77
               

               Conread position:
               101-406
               

               Cow position:
               chr17:2662718-2662408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 79
               

               Conread position:
               101-406
               

               Cow position:
               chr17:7577914-7577573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               254
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               101-406
               

               Cow position:
               chr17:25718384-25718089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 77
               

               Conread position:
               101-407
               

               Cow position:
               chr17:1409950-1410257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 74
               

               Conread position:
               101-407
               

               Cow position:
               chr17:39715427-39715140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               272, 32
               

               Conread position:
               102-329
               

               Cow position:
               chr17:20856277-20856481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               102-379
               

               Cow position:
               chr17:24554262-24554007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               102-404
               

               Cow position:
               chr17:15340485-15340768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               223, 34
               

               Conread position:
               103-407
               

               Cow position:
               chr17:40288736-40289013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               105-331
               

               Cow position:
               chr17:10302075-10302296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 73
               

               Conread position:
               106-344
               

               Cow position:
               chr17:35173098-35172859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               72, 143
               

               Conread position:
               107-381
               

               Cow position:
               chr17:5720133-5719877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               264, 40
               

               Conread position:
               108-343
               

               Cow position:
               chr17:25141812-25141591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               108-382
               

               Cow position:
               chr17:6849060-6848804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               116-347
               

               Cow position:
               chr17:969136-968926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               116-407
               

               Cow position:
               chr17:17060423-17060698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               258, 43
               

               Conread position:
               118-323
               

               Cow position:
               chr17:20185522-20185308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               100, 60
               

               Conread position:
               121-211
               

               Cow position:
               chr17:484936-484850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               81
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               122-407
               

               Cow position:
               chr17:18860449-18860740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               66, 16
               

               Conread position:
               150-346
               

               Cow position:
               chr17:5344855-5344660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               32, 23
               

               Conread position:
               152-406
               

               Cow position:
               chr17:11214993-11215248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               54, 161
               

               Conread position:
               155-406
               

               Cow position:
               chr17:20780756-20780494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               156-351
               

               Cow position:
               chr17:21268533-21268335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               168-382
               

               Cow position:
               chr17:23883051-23883263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               150, 11
               

               Conread position:
               169-407
               

               Cow position:
               chr17:25097674-25097445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               171-407
               

               Cow position:
               chr17:13922710-13922461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               171-407
               

               Cow position:
               chr17:27303752-27303976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               175-406
               

               Cow position:
               chr17:14004038-14003801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               178-400
               

               Cow position:
               chr17:20874604-20874386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               196, 16
               

               Conread position:
               182-407
               

               Cow position:
               chr17:21922424-21922651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 192
               

               Conread position:
               183-379
               

               Cow position:
               chr17:28536944-28536756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               186-346
               

               Cow position:
               chr17:20306520-20306369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               187-390
               

               Cow position:
               chr17:31585615-31585412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               113, 9
               

               Conread position:
               187-444
               

               Cow position:
               chr17:32553856-32554099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               188-407
               

               Cow position:
               chr17:17410495-17410273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               189-401
               

               Cow position:
               chr17:38833242-38833031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               155, 17
               

               Conread position:
               190-406
               

               Cow position:
               chr17:26802744-26802958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               176, 17
               

               Conread position:
               191-407
               

               Cow position:
               chr17:11280903-11281125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               139, 15
               

               Conread position:
               191-407
               

               Cow position:
               chr17:20335844-20335647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               193-387
               

               Cow position:
               chr17:21788463-21788660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               194-351
               

               Cow position:
               chr17:35541974-35542132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               12, 65
               

               Conread position:
               194-360
               

               Cow position:
               chr17:9713148-9713313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-369
               

               Cow position:
               chr17:22074304-22074478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-407
               

               Cow position:
               chr17:21680973-21680747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               139, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr17:34751214-34751423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               195-357
               

               Cow position:
               chr17:10508244-10508402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               195-367
               

               Cow position:
               chr17:37430310-37430483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               196-350
               

               Cow position:
               chr17:21359219-21359064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               197-357
               

               Cow position:
               chr17:3291264-3291104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               197-381
               

               Cow position:
               chr17:27639854-27640040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               197-406
               

               Cow position:
               chr17:2275660-2275459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               199-391
               

               Cow position:
               chr17:13243858-13244047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               24, 102
               

               Conread position:
               199-406
               

               Cow position:
               chr17:7590276-7590476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               201-399
               

               Cow position:
               chr17:21325518-21325322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               173, 19
               

               Conread position:
               204-407
               

               Cow position:
               chr17:27202865-27203061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               205-371
               

               Cow position:
               chr17:11224281-11224122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               205-377
               

               Cow position:
               chr17:31480857-31481033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               106, 38
               

               Conread position:
               205-407
               

               Cow position:
               chr17:5422884-5423090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               14, 192
               

               Conread position:
               205-407
               

               Cow position:
               chr17:9854155-9853969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr17:25189467-25189270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               179, 25
               

               Conread position:
               205-407
               

               Cow position:
               chr17:26231138-26230933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               206-356
               

               Cow position:
               chr17:21655629-21655477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               206-406
               

               Cow position:
               chr17:21292865-21293061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               88, 53
               

               Conread position:
               206-407
               

               Cow position:
               chr17:30728685-30728489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               206-445
               

               Cow position:
               chr17:21738691-21738930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               170, 224
               

               Conread position:
               207-422
               

               Cow position:
               chr17:24163214-24163003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               167, 13
               

               Conread position:
               208-407
               

               Cow position:
               chr17:6936500-6936693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               166, 82
               

               Conread position:
               208-407
               

               Cow position:
               chr17:18766810-18767011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               12, 169
               

               Conread position:
               208-448
               

               Cow position:
               chr17:7698226-7697996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               209, 27
               

               Conread position:
               209-402
               

               Cow position:
               chr17:22128100-22127908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               209-407
               

               Cow position:
               chr17:15684691-15684495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               213-368
               

               Cow position:
               chr17:41666316-41666162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               214-385
               

               Cow position:
               chr17:11831941-11832111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               214-405
               

               Cow position:
               chr17:9746687-9746499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               165, 98
               

               Conread position:
               215-406
               

               Cow position:
               chr17:38263315-38263510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               216-332
               

               Cow position:
               chr17:18776014-18776130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               216-348
               

               Cow position:
               chr17:10825652-10825520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               127, 10
               

               Conread position:
               216-391
               

               Cow position:
               chr17:43141536-43141711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 42
               

               Conread position:
               216-407
               

               Cow position:
               chr17:17682737-17682919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 39
               

               Conread position:
               217-446
               

               Cow position:
               chr17:33275579-33275806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               165, 7
               

               Conread position:
               218-347
               

               Cow position:
               chr17:35457643-35457778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               218-367
               

               Cow position:
               chr17:8108187-8108332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               218-407
               

               Cow position:
               chr17:20990019-20990213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               94, 127
               

               Conread position:
               218-407
               

               Cow position:
               chr17:40852142-40851957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               61, 6
               

               Conread position:
               219-407
               

               Cow position:
               chr17:11215725-11215909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               153, 34
               

               Conread position:
               221-345
               

               Cow position:
               chr17:42259383-42259260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               91, 113
               

               Conread position:
               221-404
               

               Cow position:
               chr17:33793331-33793149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               153, 91
               

               Conread position:
               221-406
               

               Cow position:
               chr17:12219771-12219953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               160, 116
               

               Conread position:
               221-406
               

               Cow position:
               chr17:36864798-36864610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr17:18818738-18818550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               15, 40
               

               Conread position:
               221-407
               

               Cow position:
               chr17:27429733-27429558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               152, 91
               

               Conread position:
               221-407
               

               Cow position:
               chr17:32471613-32471802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               221-411
               

               Cow position:
               chr17:5012907-5013099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               49, 135
               

               Conread position:
               222-337
               

               Cow position:
               chr17:21298610-21298495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-344
               

               Cow position:
               chr17:11985709-11985833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               222-345
               

               Cow position:
               chr17:26225194-26225071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-351
               

               Cow position:
               chr17:10414665-10414536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-364
               

               Cow position:
               chr17:3097489-3097631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 134
               

               Conread position:
               222-365
               

               Cow position:
               chr17:1634325-1634468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-367
               

               Cow position:
               chr17:20929408-20929263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-377
               

               Cow position:
               chr17:26072594-26072749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               222-379
               

               Cow position:
               chr17:27440341-27440187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               23, 91
               

               Conread position:
               222-384
               

               Cow position:
               chr17:40276907-40276744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-386
               

               Cow position:
               chr17:9940861-9940694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               90, 7
               

               Conread position:
               222-386
               

               Cow position:
               chr17:17035116-17034953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               222-390
               

               Cow position:
               chr17:6566643-6566477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               109, 38
               

               Conread position:
               222-398
               

               Cow position:
               chr17:22056861-22057037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               159, 149
               

               Conread position:
               222-399
               

               Cow position:
               chr17:34790897-34791076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               98, 173
               

               Conread position:
               222-403
               

               Cow position:
               chr17:32989643-32989462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               151, 128
               

               Conread position:
               222-403
               

               Cow position:
               chr17:32993457-32993638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               151, 128
               

               Conread position:
               222-404
               

               Cow position:
               chr17:12959273-12959090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               162, 144
               

               Conread position:
               222-406
               

               Cow position:
               chr17:17193653-17193477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               222-406
               

               Cow position:
               chr17:20848690-20848505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               7, 102
               

               Conread position:
               222-406
               

               Cow position:
               chr17:24752161-24752335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 53
               

               Conread position:
               222-407
               

               Cow position:
               chr17:1025658-1025838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 102
               

               Conread position:
               222-407
               

               Cow position:
               chr17:9770669-9770493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               150, 35
               

               Conread position:
               222-407
               

               Cow position:
               chr17:9911924-9911739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               150, 90
               

               Conread position:
               222-407
               

               Cow position:
               chr17:24883404-24883585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr17:25126516-25126334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr17:25917062-25916879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               51, 32
               

               Conread position:
               222-441
               

               Cow position:
               chr17:7143027-7142815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               223-331
               

               Cow position:
               chr17:22139746-22139638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-332
               

               Cow position:
               chr17:10650278-10650170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               223-335
               

               Cow position:
               chr17:3387882-3387771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               223-342
               

               Cow position:
               chr17:42346853-42346972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-352
               

               Cow position:
               chr17:10803042-10802918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               223-368
               

               Cow position:
               chr17:18673874-18674008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               223-373
               

               Cow position:
               chr17:12342314-12342465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               223-376
               

               Cow position:
               chr17:9509830-9509981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 34
               

               Conread position:
               223-376
               

               Cow position:
               chr17:17222507-17222353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               223-381
               

               Cow position:
               chr17:25467148-25466995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               223-381
               

               Cow position:
               chr17:43957826-43957668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-385
               

               Cow position:
               chr17:9935643-9935803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               223-389
               

               Cow position:
               chr17:15355097-15354931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-389
               

               Cow position:
               chr17:24841861-24841695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-403
               

               Cow position:
               chr17:29472632-29472452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-405
               

               Cow position:
               chr17:11618750-11618570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-405
               

               Cow position:
               chr17:17180209-17180026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               146, 108
               

               Conread position:
               223-405
               

               Cow position:
               chr17:24077567-24077388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               150, 88
               

               Conread position:
               223-407
               

               Cow position:
               chr17:908906-908725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               151, 132
               

               Conread position:
               223-407
               

               Cow position:
               chr17:1492983-1493168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr17:5349958-5350143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr17:7803009-7803193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               159, 170
               

               Conread position:
               223-407
               

               Cow position:
               chr17:11839888-11839698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               223-407
               

               Cow position:
               chr17:22564350-22564164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               154, 47
               

               Conread position:
               223-407
               

               Cow position:
               chr17:24587790-24587604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               151, 172
               

               Conread position:
               223-407
               

               Cow position:
               chr17:30665435-30665254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               152, 33
               

               Conread position:
               223-407
               

               Cow position:
               chr17:35149364-35149546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr17:37816029-37816208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               223-408
               

               Cow position:
               chr17:21039723-21039543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               223-427
               

               Cow position:
               chr17:14033476-14033680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               149, 118
               

               Conread position:
               223-441
               

               Cow position:
               chr17:16371423-16371205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               29, 171
               

               Conread position:
               224-381
               

               Cow position:
               chr17:5900534-5900377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr17:1469540-1469358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               149, 75
               

               Conread position:
               224-407
               

               Cow position:
               chr17:27048320-27048140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr17:32418951-32419132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr17:36330794-36330976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               155, 32
               

               Conread position:
               224-407
               

               Cow position:
               chr17:40771994-40771819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               225-376
               

               Cow position:
               chr17:29245607-29245456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               226-383
               

               Cow position:
               chr17:29356077-29356236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               112, 108
               

               Conread position:
               226-406
               

               Cow position:
               chr17:39857548-39857373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               151, 40
               

               Conread position:
               228-391
               

               Cow position:
               chr17:1562626-1562783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               146, 86
               

               Conread position:
               231-344
               

               Cow position:
               chr17:8723276-8723389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-349
               

               Cow position:
               chr17:20234369-20234251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               231-368
               

               Cow position:
               chr17:27292299-27292436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-377
               

               Cow position:
               chr17:24862616-24862470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-377
               

               Cow position:
               chr17:40673528-40673382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-379
               

               Cow position:
               chr17:40355416-40355268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-386
               

               Cow position:
               chr17:20904944-20905097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               143, 35
               

               Conread position:
               231-386
               

               Cow position:
               chr17:34078953-34079108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-391
               

               Cow position:
               chr17:7959338-7959179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               95, 44
               

               Conread position:
               231-391
               

               Cow position:
               chr17:11296810-11296644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               231-401
               

               Cow position:
               chr17:40331922-40331755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               143, 81
               

               Conread position:
               231-402
               

               Cow position:
               chr17:3067701-3067869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               231-404
               

               Cow position:
               chr17:8815350-8815175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               136, 164
               

               Conread position:
               231-404
               

               Cow position:
               chr17:17059581-17059408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               139, 97
               

               Conread position:
               231-404
               

               Cow position:
               chr17:39606588-39606413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               142, 164
               

               Conread position:
               231-405
               

               Cow position:
               chr17:6329273-6329098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               143, 163
               

               Conread position:
               231-406
               

               Cow position:
               chr17:2810790-2810609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr17:18720289-18720466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr17:950130-949956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               231-407
               

               Cow position:
               chr17:979011-979173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr17:10431817-10431994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 9
               

               Conread position:
               231-407
               

               Cow position:
               chr17:16158647-16158473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr17:20884681-20884505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr17:20932489-20932312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               149, 140
               

               Conread position:
               231-407
               

               Cow position:
               chr17:21495529-21495359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               143, 68
               

               Conread position:
               231-407
               

               Cow position:
               chr17:21959530-21959704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr17:24580137-24580314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               141, 58
               

               Conread position:
               231-407
               

               Cow position:
               chr17:25584399-25584221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr17:26000274-26000099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               143, 9
               

               Conread position:
               231-407
               

               Cow position:
               chr17:26789577-26789402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               143, 106
               

               Conread position:
               231-407
               

               Cow position:
               chr17:28982332-28982161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               150, 20
               

               Conread position:
               231-407
               

               Cow position:
               chr17:35573910-35573739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr17:40384053-40384222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 61
               

               Conread position:
               231-408
               

               Cow position:
               chr17:5768062-5767890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               231-430
               

               Cow position:
               chr17:34836329-34836131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               232-363
               

               Cow position:
               chr17:33653528-33653664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               232-371
               

               Cow position:
               chr17:43717179-43717309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               62, 82
               

               Conread position:
               232-387
               

               Cow position:
               chr17:35334252-35334098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               232-390
               

               Cow position:
               chr17:25930383-25930541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               142, 39
               

               Conread position:
               232-407
               

               Cow position:
               chr17:21489468-21489641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr17:21806295-21806469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr17:25502267-25502092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               142, 79
               

               Conread position:
               232-407
               

               Cow position:
               chr17:36791283-36791115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               142, 79
               

               Conread position:
               232-407
               

               Cow position:
               chr17:37699193-37699369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               142, 162
               

               Conread position:
               233-399
               

               Cow position:
               chr17:16868116-16868279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               149, 21
               

               Conread position:
               233-402
               

               Cow position:
               chr17:26448698-26448532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               233-406
               

               Cow position:
               chr17:37481915-37482083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               6, 38
               

               Conread position:
               233-407
               

               Cow position:
               chr17:1035441-1035615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               151, 160
               

               Conread position:
               233-407
               

               Cow position:
               chr17:4786333-4786513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               49, 146
               

               Conread position:
               233-407
               

               Cow position:
               chr17:8690296-8690459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               143, 66
               

               Conread position:
               233-408
               

               Cow position:
               chr17:14848392-14848562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               147, 14
               

               Conread position:
               233-412
               

               Cow position:
               chr17:15376746-15376579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               172, 23
               

               Conread position:
               233-441
               

               Cow position:
               chr17:27183788-27183992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               234-396
               

               Cow position:
               chr17:3153420-3153579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr17:5898372-5898548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 142
               

               Conread position:
               234-407
               

               Cow position:
               chr17:40741806-40741631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               98, 29
               

               Conread position:
               235-346
               

               Cow position:
               chr17:5247271-5247160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-370
               

               Cow position:
               chr17:31991086-31990952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               235-383
               

               Cow position:
               chr17:36275487-36275336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               235-400
               

               Cow position:
               chr17:30718264-30718431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               235-403
               

               Cow position:
               chr17:32278753-32278919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               56, 119
               

               Conread position:
               235-403
               

               Cow position:
               chr17:32280819-32280653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               56, 119
               

               Conread position:
               235-406
               

               Cow position:
               chr17:20810336-20810506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               138, 26
               

               Conread position:
               235-406
               

               Cow position:
               chr17:28468276-28468110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               137, 71
               

               Conread position:
               235-406
               

               Cow position:
               chr17:36814515-36814343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               138, 159
               

               Conread position:
               235-407
               

               Cow position:
               chr17:3354036-3353864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               149, 52
               

               Conread position:
               235-407
               

               Cow position:
               chr17:4213897-4213728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               8, 18
               

               Conread position:
               235-407
               

               Cow position:
               chr17:7693216-7693046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               235-407
               

               Cow position:
               chr17:10561788-10561612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               80, 127
               

               Conread position:
               235-407
               

               Cow position:
               chr17:11156340-11156509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr17:21755279-21755447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               8, 79
               

               Conread position:
               235-407
               

               Cow position:
               chr17:31856825-31856653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               143, 25
               

               Conread position:
               235-408
               

               Cow position:
               chr17:27795807-27795628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               235-426
               

               Cow position:
               chr17:5144008-5144202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               98, 38
               

               Conread position:
               235-426
               

               Cow position:
               chr17:29026226-29026038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               64, 137
               

               Conread position:
               235-441
               

               Cow position:
               chr17:14652626-14652831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 35
               

               Conread position:
               236-369
               

               Cow position:
               chr17:4833376-4833508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               236-372
               

               Cow position:
               chr17:34835955-34836091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-380
               

               Cow position:
               chr17:37129351-37129208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               236-403
               

               Cow position:
               chr17:41891909-41892079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 20
               

               Conread position:
               236-404
               

               Cow position:
               chr17:12536312-12536483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr17:10458779-10458955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr17:40312858-40312688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               145, 60
               

               Conread position:
               237-380
               

               Cow position:
               chr17:10769359-10769502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               237-402
               

               Cow position:
               chr17:7571255-7571087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               237-406
               

               Cow position:
               chr17:1114040-1113874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               237-407
               

               Cow position:
               chr17:20992890-20993057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               137, 92
               

               Conread position:
               238-372
               

               Cow position:
               chr17:8544455-8544321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               96, 21
               

               Conread position:
               238-390
               

               Cow position:
               chr17:7760322-7760470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               238-407
               

               Cow position:
               chr17:9565451-9565290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               239-381
               

               Cow position:
               chr17:12288944-12288804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               243-369
               

               Cow position:
               chr17:15702501-15702376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               243-390
               

               Cow position:
               chr17:13638770-13638625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               137, 48
               

               Conread position:
               243-407
               

               Cow position:
               chr17:23280709-23280875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               131, 29
               

               Conread position:
               244-380
               

               Cow position:
               chr17:33052996-33052854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 99
               

               Conread position:
               244-383
               

               Cow position:
               chr17:1350595-1350454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr17:30529400-30529559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               245-383
               

               Cow position:
               chr17:22032551-22032691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               55, 129
               

               Conread position:
               247-379
               

               Cow position:
               chr17:8986463-8986595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               251-391
               

               Cow position:
               chr17:33913437-33913576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               102, 121
               

               Conread position:
               251-406
               

               Cow position:
               chr17:21628615-21628463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               254-390
               

               Cow position:
               chr17:25587321-25587457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               130, 117
               

               Conread position:
               255-378
               

               Cow position:
               chr17:25169211-25169089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               255-402
               

               Cow position:
               chr17:23798416-23798266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               256-407
               

               Cow position:
               chr17:7851220-7851069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               257-406
               

               Cow position:
               chr17:31230991-31231131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr17:3782171-3782026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               113, 59
               

               Conread position:
               261-407
               

               Cow position:
               chr17:22246117-22245974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               262-406
               

               Cow position:
               chr17:14761995-14762138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               265-407
               

               Cow position:
               chr17:924003-923860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               105, 122
               

               Conread position:
               266-407
               

               Cow position:
               chr17:11101684-11101818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               266-407
               

               Cow position:
               chr17:32265367-32265504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               275-407
               

               Cow position:
               chr17:7567280-7567412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               106, 96
               

               Conread position:
               61-310
               

               Cow position:
               chr18:38438548-38438786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               7, 120
               

               Conread position:
               76-184
               

               Cow position:
               chr18:8208232-8208338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               78-380
               

               Cow position:
               chr18:56157941-56157647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               229, 90
               

               Conread position:
               79-409
               

               Cow position:
               chr18:4623908-4624241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               82-329
               

               Cow position:
               chr18:871909-871650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               97, 23
               

               Conread position:
               83-204
               

               Cow position:
               chr18:8390397-8390276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 96
               

               Conread position:
               83-229
               

               Cow position:
               chr18:40356760-40356906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               103, 22
               

               Conread position:
               85-203
               

               Cow position:
               chr18:9008640-9008520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               86-379
               

               Cow position:
               chr18:24529655-24529932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               87-183
               

               Cow position:
               chr18:17195165-17195262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               87-210
               

               Cow position:
               chr18:40475997-40476118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               119, 91
               

               Conread position:
               87-222
               

               Cow position:
               chr18:23026847-23026980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               107, 83
               

               Conread position:
               88-223
               

               Cow position:
               chr18:19849591-19849722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               88-226
               

               Cow position:
               chr18:56171559-56171698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 105
               

               Conread position:
               89-224
               

               Cow position:
               chr18:41553186-41553323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               90, 126
               

               Conread position:
               89-407
               

               Cow position:
               chr18:4872306-4871982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 206
               

               Conread position:
               89-407
               

               Cow position:
               chr18:7077179-7076865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               97, 16
               

               Conread position:
               90-209
               

               Cow position:
               chr18:54928139-54928256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               106, 88
               

               Conread position:
               91-183
               

               Cow position:
               chr18:5072240-5072331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               91-407
               

               Cow position:
               chr18:28768568-28768273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               283, 53
               

               Conread position:
               93-407
               

               Cow position:
               chr18:25647043-25647343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               281, 85
               

               Conread position:
               94-212
               

               Cow position:
               chr18:40759395-40759279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               94-240
               

               Cow position:
               chr18:41009200-41009063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               94-286
               

               Cow position:
               chr18:39190294-39190472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 86
               

               Conread position:
               94-320
               

               Cow position:
               chr18:54660001-54659770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               80, 53
               

               Conread position:
               94-370
               

               Cow position:
               chr18:51867342-51867604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               237, 73
               

               Conread position:
               94-406
               

               Cow position:
               chr18:35536993-35537324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               92, 84
               

               Conread position:
               95-407
               

               Cow position:
               chr18:16997490-16997161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               95, 83
               

               Conread position:
               95-445
               

               Cow position:
               chr18:27109080-27109423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               96-337
               

               Cow position:
               chr18:43060874-43061112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               82, 9
               

               Conread position:
               97-298
               

               Cow position:
               chr18:30570277-30570485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               97-372
               

               Cow position:
               chr18:43020161-43020459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               224
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               73, 9
               

               Conread position:
               98-226
               

               Cow position:
               chr18:21206305-21206178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               70, 79
               

               Conread position:
               99-388
               

               Cow position:
               chr18:56190728-56191033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               70, 239
               

               Conread position:
               101-219
               

               Cow position:
               chr18:45079097-45079217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               85, 77
               

               Conread position:
               101-225
               

               Cow position:
               chr18:51190341-51190469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               101-245
               

               Cow position:
               chr18:31125531-31125390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               121, 69
               

               Conread position:
               101-367
               

               Cow position:
               chr18:19433989-19433712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               72, 169
               

               Conread position:
               101-381
               

               Cow position:
               chr18:15025870-15025606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               167, 32
               

               Conread position:
               101-407
               

               Cow position:
               chr18:47966719-47967015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               67, 118
               

               Conread position:
               102-404
               

               Cow position:
               chr18:9177092-9176812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               265, 31
               

               Conread position:
               106-329
               

               Cow position:
               chr18:35077443-35077236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               106-372
               

               Cow position:
               chr18:1607469-1607197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 23
               

               Conread position:
               107-401
               

               Cow position:
               chr18:35012115-35012402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 62
               

               Conread position:
               108-298
               

               Cow position:
               chr18:49543781-49543607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               110-345
               

               Cow position:
               chr18:49982936-49982700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               113-407
               

               Cow position:
               chr18:21266703-21266412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               114-405
               

               Cow position:
               chr18:19896270-19896544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               260, 47
               

               Conread position:
               116-383
               

               Cow position:
               chr18:11263019-11262769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               122-379
               

               Cow position:
               chr18:49324237-49324497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               122-407
               

               Cow position:
               chr18:25984374-25984661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               57, 141
               

               Conread position:
               133-407
               

               Cow position:
               chr18:39022419-39022168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               139-316
               

               Cow position:
               chr18:53751953-53751778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 69
               

               Conread position:
               141-407
               

               Cow position:
               chr18:51594630-51594895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               161-407
               

               Cow position:
               chr18:21102625-21102863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               166-407
               

               Cow position:
               chr18:39875112-39875350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               187, 5
               

               Conread position:
               167-446
               

               Cow position:
               chr18:2619061-2619346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               6, 25
               

               Conread position:
               168-389
               

               Cow position:
               chr18:38757689-38757909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               171-341
               

               Cow position:
               chr18:52625315-52625492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               183-376
               

               Cow position:
               chr18:19788113-19787917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               183-405
               

               Cow position:
               chr18:7359872-7359655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               185-406
               

               Cow position:
               chr18:19272966-19273192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               185-419
               

               Cow position:
               chr18:51212962-51212738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               224, 11
               

               Conread position:
               187-407
               

               Cow position:
               chr18:22214620-22214390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               192-387
               

               Cow position:
               chr18:35692978-35692783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               194-328
               

               Cow position:
               chr18:23921584-23921715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-390
               

               Cow position:
               chr18:24342962-24342769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               195-400
               

               Cow position:
               chr18:39434948-39434740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               13, 80
               

               Conread position:
               196-407
               

               Cow position:
               chr18:36459049-36458842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               101, 27
               

               Conread position:
               196-407
               

               Cow position:
               chr18:51392523-51392732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               10, 124
               

               Conread position:
               197-360
               

               Cow position:
               chr18:47963743-47963580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               197-431
               

               Cow position:
               chr18:5701364-5701132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               219, 11
               

               Conread position:
               198-342
               

               Cow position:
               chr18:53962313-53962453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               199-356
               

               Cow position:
               chr18:45985511-45985666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               199-379
               

               Cow position:
               chr18:6399521-6399695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               35, 8
               

               Conread position:
               205-356
               

               Cow position:
               chr18:11672152-11672002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               205-404
               

               Cow position:
               chr18:47512119-47511916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr18:4556063-4556257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr18:23162995-23162801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               177, 18
               

               Conread position:
               205-407
               

               Cow position:
               chr18:37023442-37023644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               166, 11
               

               Conread position:
               206-407
               

               Cow position:
               chr18:3158483-3158693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               14, 158
               

               Conread position:
               206-407
               

               Cow position:
               chr18:10656549-10656343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               207-373
               

               Cow position:
               chr18:21768723-21768561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               208-369
               

               Cow position:
               chr18:6075290-6075449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               214-382
               

               Cow position:
               chr18:19295983-19295821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               214-383
               

               Cow position:
               chr18:43014767-43014929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               163, 7
               

               Conread position:
               216-330
               

               Cow position:
               chr18:52589869-52589982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 42
               

               Conread position:
               216-348
               

               Cow position:
               chr18:19809582-19809715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-369
               

               Cow position:
               chr18:4851383-4851531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               7, 102
               

               Conread position:
               218-344
               

               Cow position:
               chr18:39460318-39460191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               218-383
               

               Cow position:
               chr18:46647062-46647224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               5, 100
               

               Conread position:
               218-391
               

               Cow position:
               chr18:14225492-14225319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               5, 147
               

               Conread position:
               218-404
               

               Cow position:
               chr18:1571139-1571325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               5, 115
               

               Conread position:
               218-406
               

               Cow position:
               chr18:51655947-51656134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               5, 14
               

               Conread position:
               221-350
               

               Cow position:
               chr18:29390101-29390230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               93, 121
               

               Conread position:
               221-378
               

               Cow position:
               chr18:5072316-5072473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               221-386
               

               Cow position:
               chr18:912012-912174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 97
               

               Conread position:
               221-391
               

               Cow position:
               chr18:5647909-5647735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               221-391
               

               Cow position:
               chr18:50359426-50359254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               144
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               221-403
               

               Cow position:
               chr18:44262724-44262539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               93, 101
               

               Conread position:
               221-407
               

               Cow position:
               chr18:5766509-5766321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               15, 96
               

               Conread position:
               221-407
               

               Cow position:
               chr18:6609757-6609949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 157
               

               Conread position:
               221-407
               

               Cow position:
               chr18:48242286-48242098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               53, 109
               

               Conread position:
               222-329
               

               Cow position:
               chr18:27637587-27637478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               222-372
               

               Cow position:
               chr18:46072556-46072406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-372
               

               Cow position:
               chr18:51192647-51192797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-373
               

               Cow position:
               chr18:35827281-35827431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               222-381
               

               Cow position:
               chr18:44909146-44908986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-382
               

               Cow position:
               chr18:20641403-20641563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-383
               

               Cow position:
               chr18:36768718-36768878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 92
               

               Conread position:
               222-390
               

               Cow position:
               chr18:45903804-45903971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               157, 90
               

               Conread position:
               222-391
               

               Cow position:
               chr18:4489815-4489981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               154, 135
               

               Conread position:
               222-396
               

               Cow position:
               chr18:3180504-3180334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr18:29474836-29474650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               151, 60
               

               Conread position:
               222-407
               

               Cow position:
               chr18:728118-727941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               151, 44
               

               Conread position:
               222-407
               

               Cow position:
               chr18:4673397-4673214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               151, 88
               

               Conread position:
               222-407
               

               Cow position:
               chr18:10214097-10214287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr18:19193272-19193457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr18:19883626-19883438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               82, 175
               

               Conread position:
               222-407
               

               Cow position:
               chr18:20174038-20174220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr18:20175104-20175283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr18:32883394-32883215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr18:33883873-33883693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr18:51691368-51691555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               13, 150
               

               Conread position:
               222-407
               

               Cow position:
               chr18:56159554-56159370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               158, 60
               

               Conread position:
               223-330
               

               Cow position:
               chr18:5189601-5189708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-342
               

               Cow position:
               chr18:2108338-2108220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               223-345
               

               Cow position:
               chr18:23821740-23821862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-348
               

               Cow position:
               chr18:45185964-45185838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               223-364
               

               Cow position:
               chr18:47410635-47410494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-367
               

               Cow position:
               chr18:11765284-11765427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               223-372
               

               Cow position:
               chr18:2773300-2773449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-379
               

               Cow position:
               chr18:47920838-47920677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               103, 152
               

               Conread position:
               223-381
               

               Cow position:
               chr18:31557068-31557225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-404
               

               Cow position:
               chr18:33896324-33896518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               223-406
               

               Cow position:
               chr18:11867431-11867246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               223-406
               

               Cow position:
               chr18:19646267-19646084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               223-406
               

               Cow position:
               chr18:39623893-39623710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               20, 170
               

               Conread position:
               223-407
               

               Cow position:
               chr18:1144094-1144277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               160, 51
               

               Conread position:
               223-407
               

               Cow position:
               chr18:5632360-5632174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr18:12273750-12273566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr18:21195243-21195436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr18:24508139-24508330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr18:24759564-24759747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr18:25282463-25282644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr18:35874170-35873986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               159, 119
               

               Conread position:
               223-407
               

               Cow position:
               chr18:51405819-51405997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               158, 55
               

               Conread position:
               223-407
               

               Cow position:
               chr18:51643274-51643459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               154
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               28, 36
               

               Conread position:
               223-407
               

               Cow position:
               chr18:55747777-55747595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               224-338
               

               Cow position:
               chr18:49197510-49197394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               224-371
               

               Cow position:
               chr18:45558239-45558091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               224-386
               

               Cow position:
               chr18:51383306-51383468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               150, 126
               

               Conread position:
               224-407
               

               Cow position:
               chr18:33157906-33157725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               99, 28
               

               Conread position:
               224-407
               

               Cow position:
               chr18:47417088-47416902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               148, 57
               

               Conread position:
               226-407
               

               Cow position:
               chr18:11377453-11377273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               228-380
               

               Cow position:
               chr18:47693152-47693000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               146, 7
               

               Conread position:
               230-374
               

               Cow position:
               chr18:49655771-49655627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               57, 38
               

               Conread position:
               231-362
               

               Cow position:
               chr18:39168615-39168485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               231-370
               

               Cow position:
               chr18:16044065-16044206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               231-378
               

               Cow position:
               chr18:40047417-40047560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               231-379
               

               Cow position:
               chr18:4649643-4649498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               114, 43
               

               Conread position:
               231-381
               

               Cow position:
               chr18:2549219-2549368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-381
               

               Cow position:
               chr18:52251773-52251922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-382
               

               Cow position:
               chr18:19765273-19765122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-383
               

               Cow position:
               chr18:4203846-4203996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr18:30341100-30341248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr18:46048836-46048684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr18:50082173-50082325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr18:56184019-56183864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               231-387
               

               Cow position:
               chr18:9008209-9008058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               231-388
               

               Cow position:
               chr18:36746175-36746331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-390
               

               Cow position:
               chr18:4757950-4758107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               155, 25
               

               Conread position:
               231-398
               

               Cow position:
               chr18:24719397-24719231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               231-399
               

               Cow position:
               chr18:21192330-21192498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               142, 38
               

               Conread position:
               231-404
               

               Cow position:
               chr18:11779738-11779565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 154
               

               Conread position:
               231-405
               

               Cow position:
               chr18:55692900-55692723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-406
               

               Cow position:
               chr18:10322891-10322716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               12, 170
               

               Conread position:
               231-407
               

               Cow position:
               chr18:1954505-1954682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr18:2863906-2864086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr18:5078690-5078867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               150, 25
               

               Conread position:
               231-407
               

               Cow position:
               chr18:5711569-5711741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr18:12584755-12584935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr18:18918876-18919048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr18:30586141-30586314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               142, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr18:45104354-45104536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr18:48713635-48713458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               149, 135
               

               Conread position:
               231-407
               

               Cow position:
               chr18:48828691-48828872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               232-357
               

               Cow position:
               chr18:23649005-23648880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               232-367
               

               Cow position:
               chr18:11657739-11657603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               127, 68
               

               Conread position:
               232-371
               

               Cow position:
               chr18:135573-135710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               232-371
               

               Cow position:
               chr18:11754213-11754077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               232-372
               

               Cow position:
               chr18:22170701-22170561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-387
               

               Cow position:
               chr18:56171931-56172082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               232-390
               

               Cow position:
               chr18:27388666-27388507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               83, 39
               

               Conread position:
               232-405
               

               Cow position:
               chr18:24266324-24266499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               232-405
               

               Cow position:
               chr18:52855138-52854961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               232-406
               

               Cow position:
               chr18:48962019-48961843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               62, 149
               

               Conread position:
               232-406
               

               Cow position:
               chr18:50974210-50974385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 162
               

               Conread position:
               232-406
               

               Cow position:
               chr18:51676008-51676181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               150, 22
               

               Conread position:
               232-407
               

               Cow position:
               chr18:1585030-1585208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr18:1931375-1931546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               148, 80
               

               Conread position:
               232-407
               

               Cow position:
               chr18:3211961-3211781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr18:28657828-28658000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               233-372
               

               Cow position:
               chr18:4757490-4757627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               233-387
               

               Cow position:
               chr18:56155595-56155449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               233-391
               

               Cow position:
               chr18:23446979-23447139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               233-406
               

               Cow position:
               chr18:2774057-2774226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               233-406
               

               Cow position:
               chr18:21782769-21782602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr18:7109210-7109037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               141, 20
               

               Conread position:
               233-407
               

               Cow position:
               chr18:32873674-32873500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               233-407
               

               Cow position:
               chr18:38344889-38344714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 99
               

               Conread position:
               233-427
               

               Cow position:
               chr18:44027990-44028179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               147, 98
               

               Conread position:
               234-407
               

               Cow position:
               chr18:7956229-7956052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               235-361
               

               Cow position:
               chr18:44917837-44917711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-370
               

               Cow position:
               chr18:47125320-47125455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-384
               

               Cow position:
               chr18:247615-247757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               126, 77
               

               Conread position:
               235-386
               

               Cow position:
               chr18:7481226-7481084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               235-400
               

               Cow position:
               chr18:21380488-21380650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               139, 120
               

               Conread position:
               235-407
               

               Cow position:
               chr18:29796348-29796516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr18:31586295-31586459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr18:36264692-36264857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr18:51850484-51850649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               146, 72
               

               Conread position:
               235-407
               

               Cow position:
               chr18:56181375-56181555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               8, 41
               

               Conread position:
               235-408
               

               Cow position:
               chr18:56301972-56301797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               147, 74
               

               Conread position:
               236-407
               

               Cow position:
               chr18:43555445-43555616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr18:47486122-47485961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr18:52634991-52635170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr18:53642671-53642844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 49
               

               Conread position:
               236-407
               

               Cow position:
               chr18:56044632-56044465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               236-410
               

               Cow position:
               chr18:24976978-24977162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               236-427
               

               Cow position:
               chr18:9900841-9900646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 140
               

               Conread position:
               237-407
               

               Cow position:
               chr18:29371945-29371777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               241-369
               

               Cow position:
               chr18:15301216-15301088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               122, 63
               

               Conread position:
               243-342
               

               Cow position:
               chr18:28297792-28297889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               243-381
               

               Cow position:
               chr18:381004-380867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               243-383
               

               Cow position:
               chr18:1732802-1732937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               128, 39
               

               Conread position:
               243-391
               

               Cow position:
               chr18:35889028-35889170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               243-400
               

               Cow position:
               chr18:31672441-31672596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr18:18369290-18369454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               137, 10
               

               Conread position:
               243-407
               

               Cow position:
               chr18:47517133-47517308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               90, 10
               

               Conread position:
               244-366
               

               Cow position:
               chr18:52003601-52003481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               244-376
               

               Cow position:
               chr18:52406763-52406636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               130, 61
               

               Conread position:
               244-399
               

               Cow position:
               chr18:20798399-20798236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               245-383
               

               Cow position:
               chr18:14888361-14888223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               125, 72
               

               Conread position:
               245-406
               

               Cow position:
               chr18:9066772-9066603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               246-407
               

               Cow position:
               chr18:3166420-3166589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 81
               

               Conread position:
               247-407
               

               Cow position:
               chr18:56166049-56165892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               248-381
               

               Cow position:
               chr18:47565890-47565761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               248-407
               

               Cow position:
               chr18:4182121-4182281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               131, 23
               

               Conread position:
               249-407
               

               Cow position:
               chr18:10576177-10576011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               80, 152
               

               Conread position:
               251-406
               

               Cow position:
               chr18:23476623-23476778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               252-399
               

               Cow position:
               chr18:2098681-2098827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               254-407
               

               Cow position:
               chr18:49659822-49659972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               40, 60
               

               Conread position:
               255-376
               

               Cow position:
               chr18:21708067-21708188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               255-381
               

               Cow position:
               chr18:55015428-55015302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               255-407
               

               Cow position:
               chr18:13360114-13359973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               255-407
               

               Cow position:
               chr18:19849697-19849847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               118, 75
               

               Conread position:
               260-405
               

               Cow position:
               chr18:31125173-31125311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr18:40759261-40759115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               271-379
               

               Cow position:
               chr18:34813691-34813583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               279-407
               

               Cow position:
               chr18:14815312-14815434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               83-309
               

               Cow position:
               chr19:54919583-54919819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               86-407
               

               Cow position:
               chr19:4800967-4800673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               89-175
               

               Cow position:
               chr19:10755501-10755416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               76
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               89-239
               

               Cow position:
               chr19:18344247-18344388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               89-306
               

               Cow position:
               chr19:11241972-11242184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               156, 44
               

               Conread position:
               89-338
               

               Cow position:
               chr19:43642560-43642795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               89-445
               

               Cow position:
               chr19:11424081-11424418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               93-283
               

               Cow position:
               chr19:20301392-20301578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               94-210
               

               Cow position:
               chr19:29471807-29471692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               92, 31
               

               Conread position:
               94-287
               

               Cow position:
               chr19:43498677-43498872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               40, 87
               

               Conread position:
               94-383
               

               Cow position:
               chr19:20092766-20093039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               96-377
               

               Cow position:
               chr19:51396975-51397236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               97-309
               

               Cow position:
               chr19:13451870-13452079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               97-407
               

               Cow position:
               chr19:12036274-12036579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 81
               

               Conread position:
               97-407
               

               Cow position:
               chr19:35742380-35742091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               277, 8
               

               Conread position:
               99-199
               

               Cow position:
               chr19:10093500-10093401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               101-175
               

               Cow position:
               chr19:51073035-51072961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               75
               

               Alignm identity:
               69
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               101-375
               

               Cow position:
               chr19:10114417-10114668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               102-359
               

               Cow position:
               chr19:22438873-22438624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               88, 77
               

               Conread position:
               105-407
               

               Cow position:
               chr19:34619814-34620100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               267, 52
               

               Conread position:
               106-351
               

               Cow position:
               chr19:9733340-9733580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               116-325
               

               Cow position:
               chr19:56147259-56147050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               118-385
               

               Cow position:
               chr19:48475336-48475084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               118-406
               

               Cow position:
               chr19:30886606-30886327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               132-406
               

               Cow position:
               chr19:33237366-33237108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               139-310
               

               Cow position:
               chr19:29210906-29210721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               141-397
               

               Cow position:
               chr19:1948465-1948213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 134
               

               Conread position:
               157-381
               

               Cow position:
               chr19:33241321-33241549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 219
               

               Conread position:
               161-311
               

               Cow position:
               chr19:11754413-11754563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               161-391
               

               Cow position:
               chr19:39254271-39254498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               164-441
               

               Cow position:
               chr19:53840686-53840421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               171-320
               

               Cow position:
               chr19:18344372-18344526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               171-374
               

               Cow position:
               chr19:7675906-7676113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               16, 150
               

               Conread position:
               175-343
               

               Cow position:
               chr19:33931697-33931864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               176-402
               

               Cow position:
               chr19:15719457-15719684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               200, 176
               

               Conread position:
               178-371
               

               Cow position:
               chr19:7675392-7675200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               179-407
               

               Cow position:
               chr19:42236186-42235957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               184-356
               

               Cow position:
               chr19:17069004-17068837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               188-301
               

               Cow position:
               chr19:33702205-33702318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               190-407
               

               Cow position:
               chr19:8375156-8375375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               191-379
               

               Cow position:
               chr19:4587591-4587781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               194-378
               

               Cow position:
               chr19:2068412-2068225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               194-379
               

               Cow position:
               chr19:18921100-18921288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               194-406
               

               Cow position:
               chr19:7404235-7404447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               180, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr19:16693888-16694112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               195-407
               

               Cow position:
               chr19:17273597-17273799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               196-404
               

               Cow position:
               chr19:43647556-43647346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               81, 10
               

               Conread position:
               198-407
               

               Cow position:
               chr19:22134015-22134214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               199-407
               

               Cow position:
               chr19:13316284-13316486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               199-407
               

               Cow position:
               chr19:40051257-40051461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               199-407
               

               Cow position:
               chr19:43058661-43058467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               201-331
               

               Cow position:
               chr19:4449904-4449773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               5, 110
               

               Conread position:
               201-372
               

               Cow position:
               chr19:38664193-38664355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               5, 41
               

               Conread position:
               205-341
               

               Cow position:
               chr19:1553839-1553704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               205-406
               

               Cow position:
               chr19:6079233-6079428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               205-407
               

               Cow position:
               chr19:22449798-22450000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               205-439
               

               Cow position:
               chr19:43373171-43372945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               206-404
               

               Cow position:
               chr19:34757870-34758066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               17, 166
               

               Conread position:
               206-407
               

               Cow position:
               chr19:54915561-54915762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               166, 173
               

               Conread position:
               206-408
               

               Cow position:
               chr19:51185553-51185354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               207-342
               

               Cow position:
               chr19:44757351-44757485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               207-406
               

               Cow position:
               chr19:10242709-10242513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               161
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               210-344
               

               Cow position:
               chr19:15076071-15076207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               210-402
               

               Cow position:
               chr19:1664061-1664258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               212-339
               

               Cow position:
               chr19:4586420-4586549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               214-408
               

               Cow position:
               chr19:28447564-28447369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 106
               

               Conread position:
               215-352
               

               Cow position:
               chr19:24933402-24933538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               93, 43
               

               Conread position:
               215-407
               

               Cow position:
               chr19:38339859-38340049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               216-348
               

               Cow position:
               chr19:52356375-52356241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-406
               

               Cow position:
               chr19:41024344-41024154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               164, 7
               

               Conread position:
               216-406
               

               Cow position:
               chr19:41695538-41695734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr19:12711754-12711945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               34, 41
               

               Conread position:
               217-344
               

               Cow position:
               chr19:14581483-14581356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               7, 93
               

               Conread position:
               218-345
               

               Cow position:
               chr19:5522035-5522163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               5, 41
               

               Conread position:
               218-407
               

               Cow position:
               chr19:26975948-26976131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               219-341
               

               Cow position:
               chr19:26869981-26869859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               219-345
               

               Cow position:
               chr19:2042203-2042081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               219-347
               

               Cow position:
               chr19:42745986-42746118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               219-381
               

               Cow position:
               chr19:43560711-43560558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               219-407
               

               Cow position:
               chr19:37466943-37467129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               219-407
               

               Cow position:
               chr19:42564263-42564067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               220-361
               

               Cow position:
               chr19:4117248-4117388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               132, 10
               

               Conread position:
               221-390
               

               Cow position:
               chr19:21176625-21176796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               221-398
               

               Cow position:
               chr19:10538437-10538613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               149, 22
               

               Conread position:
               221-402
               

               Cow position:
               chr19:39613049-39613235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               221-407
               

               Cow position:
               chr19:35322020-35322206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               158, 98
               

               Conread position:
               222-334
               

               Cow position:
               chr19:16870660-16870771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               222-343
               

               Cow position:
               chr19:50849954-50849833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 12
               

               Conread position:
               222-372
               

               Cow position:
               chr19:26167798-26167947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               222-379
               

               Cow position:
               chr19:26269119-26269269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               222-380
               

               Cow position:
               chr19:15362581-15362742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               47, 18
               

               Conread position:
               222-383
               

               Cow position:
               chr19:30241813-30241653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               222-387
               

               Cow position:
               chr19:49290342-49290503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               222-391
               

               Cow position:
               chr19:25763226-25763061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-397
               

               Cow position:
               chr19:22816902-22817065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               222-400
               

               Cow position:
               chr19:36845365-36845185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               146
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-405
               

               Cow position:
               chr19:6344188-6344001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               151, 61
               

               Conread position:
               222-405
               

               Cow position:
               chr19:21335482-21335675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               79, 9
               

               Conread position:
               222-407
               

               Cow position:
               chr19:268469-268284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               157, 148
               

               Conread position:
               222-407
               

               Cow position:
               chr19:1978297-1978098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr19:7637121-7637308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               151, 18
               

               Conread position:
               222-407
               

               Cow position:
               chr19:7741487-7741680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr19:8128420-8128231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               158, 153
               

               Conread position:
               222-407
               

               Cow position:
               chr19:11191505-11191686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               158, 98
               

               Conread position:
               222-407
               

               Cow position:
               chr19:14348126-14347943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               150, 36
               

               Conread position:
               222-407
               

               Cow position:
               chr19:15092021-15092205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               222-407
               

               Cow position:
               chr19:17796011-17795827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               157, 108
               

               Conread position:
               222-407
               

               Cow position:
               chr19:20935872-20935684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 174
               

               Conread position:
               222-407
               

               Cow position:
               chr19:30910260-30910073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               222-407
               

               Cow position:
               chr19:39384926-39385108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr19:52750643-52750829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr19:53243364-53243544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               150, 95
               

               Conread position:
               222-407
               

               Cow position:
               chr19:55590347-55590160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               152, 104
               

               Conread position:
               223-331
               

               Cow position:
               chr19:29139316-29139208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-347
               

               Cow position:
               chr19:1897839-1897962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               223-364
               

               Cow position:
               chr19:6854168-6854306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               223-371
               

               Cow position:
               chr19:9391037-9391185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               223-377
               

               Cow position:
               chr19:30007299-30007152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               223-389
               

               Cow position:
               chr19:3857794-3857965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               125, 8
               

               Conread position:
               223-397
               

               Cow position:
               chr19:11194648-11194819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-400
               

               Cow position:
               chr19:17354970-17354794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               151, 30
               

               Conread position:
               223-400
               

               Cow position:
               chr19:52215275-52215099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-405
               

               Cow position:
               chr19:20622768-20622586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               151, 170
               

               Conread position:
               223-405
               

               Cow position:
               chr19:30227634-30227453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               150, 141
               

               Conread position:
               223-405
               

               Cow position:
               chr19:34819072-34819258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr19:729634-729814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               151, 17
               

               Conread position:
               223-407
               

               Cow position:
               chr19:2220961-2221148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr19:10081189-10080998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr19:15887206-15887394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr19:24137382-24137192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               223-407
               

               Cow position:
               chr19:25041133-25041306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               148, 68
               

               Conread position:
               223-407
               

               Cow position:
               chr19:25526398-25526210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr19:25673412-25673589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr19:38111579-38111402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-407
               

               Cow position:
               chr19:39758635-39758451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr19:43292168-43291982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               77, 155
               

               Conread position:
               223-411
               

               Cow position:
               chr19:13121169-13121351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               223-449
               

               Cow position:
               chr19:35870902-35870681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               223-449
               

               Cow position:
               chr19:55247746-55247523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               20, 110
               

               Conread position:
               224-371
               

               Cow position:
               chr19:54943076-54942935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               224-403
               

               Cow position:
               chr19:23222743-23222570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               124, 88
               

               Conread position:
               224-426
               

               Cow position:
               chr19:23304377-23304577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               158, 113
               

               Conread position:
               225-405
               

               Cow position:
               chr19:35762138-35762321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               99, 59
               

               Conread position:
               226-407
               

               Cow position:
               chr19:3245949-3246117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr19:6417720-6417525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr19:7884689-7884509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               154, 78
               

               Conread position:
               228-400
               

               Cow position:
               chr19:25652650-25652817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               12, 84
               

               Conread position:
               228-407
               

               Cow position:
               chr19:39648967-39649145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               114, 81
               

               Conread position:
               229-407
               

               Cow position:
               chr19:40450126-40449946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               145, 81
               

               Conread position:
               230-407
               

               Cow position:
               chr19:33913634-33913454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               143, 166
               

               Conread position:
               231-343
               

               Cow position:
               chr19:29115849-29115740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-349
               

               Cow position:
               chr19:51637146-51637031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               231-351
               

               Cow position:
               chr19:31998167-31998287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               231-361
               

               Cow position:
               chr19:34459365-34459494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               231-363
               

               Cow position:
               chr19:8185309-8185177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-364
               

               Cow position:
               chr19:38021545-38021417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               231-368
               

               Cow position:
               chr19:35246048-35245911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-372
               

               Cow position:
               chr19:34608094-34608232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-378
               

               Cow position:
               chr19:18054150-18054297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-384
               

               Cow position:
               chr19:35233554-35233702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 36
               

               Conread position:
               231-388
               

               Cow position:
               chr19:5406607-5406451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 144
               

               Conread position:
               231-388
               

               Cow position:
               chr19:36060044-36059887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-401
               

               Cow position:
               chr19:53371792-53371961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               231-403
               

               Cow position:
               chr19:38500270-38500098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               136, 81
               

               Conread position:
               231-404
               

               Cow position:
               chr19:24062383-24062217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr19:43949-43780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               143, 113
               

               Conread position:
               231-406
               

               Cow position:
               chr19:3811913-3812085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               130, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr19:2223997-2224170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 80
               

               Conread position:
               231-407
               

               Cow position:
               chr19:5912854-5913026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               150, 94
               

               Conread position:
               231-407
               

               Cow position:
               chr19:10970989-10971165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               57, 142
               

               Conread position:
               231-407
               

               Cow position:
               chr19:11443097-11442913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr19:18786216-18786393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               143, 92
               

               Conread position:
               231-407
               

               Cow position:
               chr19:21817069-21816894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               145, 79
               

               Conread position:
               231-407
               

               Cow position:
               chr19:25410741-25410913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               142, 98
               

               Conread position:
               231-407
               

               Cow position:
               chr19:31846445-31846620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr19:34166473-34166299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               142, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr19:38410974-38410799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 132
               

               Conread position:
               231-407
               

               Cow position:
               chr19:39781626-39781447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               147
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr19:42887055-42886882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr19:47453538-47453360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               149, 133
               

               Conread position:
               231-407
               

               Cow position:
               chr19:52185659-52185840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr19:56063323-56063502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-441
               

               Cow position:
               chr19:36125693-36125485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               103, 142
               

               Conread position:
               232-336
               

               Cow position:
               chr19:52568370-52568474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-386
               

               Cow position:
               chr19:46713741-46713589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               232-400
               

               Cow position:
               chr19:43431223-43431388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               87, 24
               

               Conread position:
               232-406
               

               Cow position:
               chr19:53542794-53542959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               120, 72
               

               Conread position:
               232-407
               

               Cow position:
               chr19:36245389-36245560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr19:47671849-47671680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               233-381
               

               Cow position:
               chr19:33469125-33468978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               233-391
               

               Cow position:
               chr19:55957467-55957623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               138, 100
               

               Conread position:
               233-407
               

               Cow position:
               chr19:14253736-14253568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr19:25382583-25382756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               152, 141
               

               Conread position:
               233-407
               

               Cow position:
               chr19:26754142-26753967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               37, 30
               

               Conread position:
               233-407
               

               Cow position:
               chr19:30471250-30471422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr19:47986962-47986786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr19:50682342-50682510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               99, 78
               

               Conread position:
               234-407
               

               Cow position:
               chr19:51285742-51285564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               140, 24
               

               Conread position:
               235-342
               

               Cow position:
               chr19:25927306-25927414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 22
               

               Conread position:
               235-345
               

               Cow position:
               chr19:55724301-55724411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-348
               

               Cow position:
               chr19:39586008-39586117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               235-361
               

               Cow position:
               chr19:39587145-39587270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               112, 55
               

               Conread position:
               235-367
               

               Cow position:
               chr19:26003512-26003645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               235-376
               

               Cow position:
               chr19:39622688-39622827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               235-377
               

               Cow position:
               chr19:12698421-12698281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               235-378
               

               Cow position:
               chr19:2965642-2965500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               135, 52
               

               Conread position:
               235-396
               

               Cow position:
               chr19:387237-387078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               18, 107
               

               Conread position:
               235-406
               

               Cow position:
               chr19:17020385-17020210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               43, 50
               

               Conread position:
               235-406
               

               Cow position:
               chr19:22153747-22153921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               137, 77
               

               Conread position:
               235-407
               

               Cow position:
               chr19:1791596-1791780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr19:3217116-3216947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr19:3870712-3870534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr19:4503322-4503150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               141, 77
               

               Conread position:
               235-407
               

               Cow position:
               chr19:25807205-25807372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               138, 64
               

               Conread position:
               235-407
               

               Cow position:
               chr19:35540401-35540227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               72, 102
               

               Conread position:
               235-407
               

               Cow position:
               chr19:43418508-43418338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               236-372
               

               Cow position:
               chr19:10557154-10557021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               236-379
               

               Cow position:
               chr19:36624320-36624459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               7, 69
               

               Conread position:
               236-380
               

               Cow position:
               chr19:6509006-6509135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               236-400
               

               Cow position:
               chr19:22798976-22799143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               14, 21
               

               Conread position:
               236-406
               

               Cow position:
               chr19:32506016-32506190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr19:10676760-10676928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               236-407
               

               Cow position:
               chr19:42763299-42763129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 76
               

               Conread position:
               238-361
               

               Cow position:
               chr19:30552116-30551993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               242-407
               

               Cow position:
               chr19:16659475-16659632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               138, 89
               

               Conread position:
               243-370
               

               Cow position:
               chr19:53497501-53497375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               243-380
               

               Cow position:
               chr19:17824380-17824518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 130
               

               Conread position:
               243-390
               

               Cow position:
               chr19:36722403-36722256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               131, 52
               

               Conread position:
               243-403
               

               Cow position:
               chr19:37067234-37067072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr19:8965357-8965192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               129, 69
               

               Conread position:
               243-407
               

               Cow position:
               chr19:43190018-43189856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               6, 14
               

               Conread position:
               244-407
               

               Cow position:
               chr19:47110134-47109969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               129, 120
               

               Conread position:
               244-407
               

               Cow position:
               chr19:47859223-47859384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               129, 19
               

               Conread position:
               245-407
               

               Cow position:
               chr19:6516359-6516197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               128, 86
               

               Conread position:
               245-407
               

               Cow position:
               chr19:31595393-31595230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               246-391
               

               Cow position:
               chr19:990323-990469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               129, 72
               

               Conread position:
               247-407
               

               Cow position:
               chr19:47118405-47118565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 70
               

               Conread position:
               249-386
               

               Cow position:
               chr19:25036280-25036148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               249-407
               

               Cow position:
               chr19:24086014-24085865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               254-407
               

               Cow position:
               chr19:43441251-43441096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               120, 73
               

               Conread position:
               255-378
               

               Cow position:
               chr19:6477791-6477668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               119, 8
               

               Conread position:
               255-380
               

               Cow position:
               chr19:2042335-2042459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               255-405
               

               Cow position:
               chr19:53799737-53799884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               256-407
               

               Cow position:
               chr19:2734531-2734381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               258-447
               

               Cow position:
               chr19:4328974-4329158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               261-379
               

               Cow position:
               chr19:53588113-53587996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               37, 82
               

               Conread position:
               261-407
               

               Cow position:
               chr19:31536203-31536056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr19:51400938-51401082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               115, 51
               

               Conread position:
               266-400
               

               Cow position:
               chr19:14573394-14573262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               266-400
               

               Cow position:
               chr19:52846870-52847000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               268-403
               

               Cow position:
               chr19:34425648-34425519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               271-391
               

               Cow position:
               chr19:7543480-7543360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               275-407
               

               Cow position:
               chr19:31824951-31825082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               99, 37
               

               Conread position:
               284-406
               

               Cow position:
               chr19:35380499-35380621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 95
               

               Conread position:
               78-361
               

               Cow position:
               chr2:20890243-20890526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               107, 100
               

               Conread position:
               80-406
               

               Cow position:
               chr2:64131671-64131364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               21, 93
               

               Conread position:
               84-341
               

               Cow position:
               chr2:35208191-35207922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               7, 83
               

               Conread position:
               84-345
               

               Cow position:
               chr2:2690010-2689757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               84-404
               

               Cow position:
               chr2:72183251-72183550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               290, 9
               

               Conread position:
               88-183
               

               Cow position:
               chr2:29551105-29551199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               88-407
               

               Cow position:
               chr2:3437970-3438270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               89-195
               

               Cow position:
               chr2:69937608-69937502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 91
               

               Conread position:
               89-211
               

               Cow position:
               chr2:39263933-39263813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               107, 12
               

               Conread position:
               89-219
               

               Cow position:
               chr2:68397237-68397369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 92
               

               Conread position:
               89-226
               

               Cow position:
               chr2:61406048-61406183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               89-321
               

               Cow position:
               chr2:45470517-45470303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               107, 88
               

               Conread position:
               89-348
               

               Cow position:
               chr2:44021992-44021743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               89-370
               

               Cow position:
               chr2:22839965-22840224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 75
               

               Conread position:
               89-405
               

               Cow position:
               chr2:82018874-82019182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               16, 57
               

               Conread position:
               89-407
               

               Cow position:
               chr2:6697239-6697553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               9, 40
               

               Conread position:
               90-215
               

               Cow position:
               chr2:21374379-21374252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 88
               

               Conread position:
               94-228
               

               Cow position:
               chr2:46406853-46406718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               8, 78
               

               Conread position:
               94-288
               

               Cow position:
               chr2:81157863-81157665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               85, 45
               

               Conread position:
               94-291
               

               Cow position:
               chr2:13055296-13055098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 94
               

               Conread position:
               94-337
               

               Cow position:
               chr2:84928422-84928169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               83, 231
               

               Conread position:
               94-339
               

               Cow position:
               chr2:19030883-19031129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 86
               

               Conread position:
               94-339
               

               Cow position:
               chr2:41385646-41385881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               94-389
               

               Cow position:
               chr2:50368213-50367929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               156, 45
               

               Conread position:
               94-404
               

               Cow position:
               chr2:32402700-32403028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               57, 152
               

               Conread position:
               94-405
               

               Cow position:
               chr2:40803234-40802946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               277, 84
               

               Conread position:
               94-407
               

               Cow position:
               chr2:42225998-42226327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               21, 10
               

               Conread position:
               95-183
               

               Cow position:
               chr2:10628326-10628414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               79
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 10
               

               Conread position:
               95-380
               

               Cow position:
               chr2:44216665-44216403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 84
               

               Conread position:
               95-399
               

               Cow position:
               chr2:46733694-46733978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               22, 71
               

               Conread position:
               96-301
               

               Cow position:
               chr2:67310866-67311075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               71, 50
               

               Conread position:
               96-407
               

               Cow position:
               chr2:40691738-40691431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 84
               

               Conread position:
               97-361
               

               Cow position:
               chr2:81758289-81758022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               81, 8
               

               Conread position:
               97-407
               

               Cow position:
               chr2:39237643-39237358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               97-407
               

               Cow position:
               chr2:69747381-69747677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               296, 8
               

               Conread position:
               97-441
               

               Cow position:
               chr2:13271162-13271511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 62
               

               Conread position:
               98-407
               

               Cow position:
               chr2:44005187-44004898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 11
               

               Conread position:
               99-385
               

               Cow position:
               chr2:39501279-39500995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 6
               

               Conread position:
               99-390
               

               Cow position:
               chr2:85496077-85496375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               46, 6
               

               Conread position:
               99-407
               

               Cow position:
               chr2:42927223-42927505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               100-184
               

               Cow position:
               chr2:38954035-38953952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               76
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               100-391
               

               Cow position:
               chr2:79138496-79138207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 79
               

               Conread position:
               101-329
               

               Cow position:
               chr2:16387836-16387622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               101-406
               

               Cow position:
               chr2:20362409-20362708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               39, 87
               

               Conread position:
               101-419
               

               Cow position:
               chr2:39544563-39544875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 48
               

               Conread position:
               104-407
               

               Cow position:
               chr2:77242118-77241802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               92, 35
               

               Conread position:
               105-226
               

               Cow position:
               chr2:64820-64940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 73
               

               Conread position:
               105-401
               

               Cow position:
               chr2:9687324-9687624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 73
               

               Conread position:
               106-254
               

               Cow position:
               chr2:41525590-41525739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               72, 91
               

               Conread position:
               106-336
               

               Cow position:
               chr2:46190450-46190243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               106-388
               

               Cow position:
               chr2:47645299-47645004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               72, 216
               

               Conread position:
               106-407
               

               Cow position:
               chr2:32416621-32416917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 30
               

               Conread position:
               108-407
               

               Cow position:
               chr2:47073439-47073136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               113-374
               

               Cow position:
               chr2:23981820-23981556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               95, 31
               

               Conread position:
               116-407
               

               Cow position:
               chr2:44081652-44081377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               265, 62
               

               Conread position:
               116-407
               

               Cow position:
               chr2:45439665-45439383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               118-226
               

               Cow position:
               chr2:66094739-66094846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               118-232
               

               Cow position:
               chr2:47139349-47139236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 38
               

               Conread position:
               118-406
               

               Cow position:
               chr2:47624197-47624460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               118-424
               

               Cow position:
               chr2:34918350-34918057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               224
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               176, 50
               

               Conread position:
               122-343
               

               Cow position:
               chr2:44032192-44032393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               129, 56
               

               Conread position:
               122-406
               

               Cow position:
               chr2:35092477-35092756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               122-420
               

               Cow position:
               chr2:24726497-24726190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               57, 112
               

               Conread position:
               134-407
               

               Cow position:
               chr2:39598161-39597905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               25, 38
               

               Conread position:
               136-440
               

               Cow position:
               chr2:32048689-32048391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               139-302
               

               Cow position:
               chr2:52656787-52656617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               144-407
               

               Cow position:
               chr2:81388890-81388632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               162-381
               

               Cow position:
               chr2:57776536-57776315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               162-407
               

               Cow position:
               chr2:30642481-30642720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               164-407
               

               Cow position:
               chr2:44229510-44229753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 26
               

               Conread position:
               166-350
               

               Cow position:
               chr2:67942281-67942091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               166-416
               

               Cow position:
               chr2:34474112-34474363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               170-406
               

               Cow position:
               chr2:39263659-39263434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               171-406
               

               Cow position:
               chr2:16018061-16018288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               171-406
               

               Cow position:
               chr2:29801957-29802182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 142
               

               Conread position:
               172-407
               

               Cow position:
               chr2:870176-870404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               176-367
               

               Cow position:
               chr2:45537015-45537204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               58, 107
               

               Conread position:
               178-406
               

               Cow position:
               chr2:62644765-62644532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               5, 19
               

               Conread position:
               179-370
               

               Cow position:
               chr2:14626757-14626571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               181-407
               

               Cow position:
               chr2:39663531-39663316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               201, 25
               

               Conread position:
               181-407
               

               Cow position:
               chr2:43029710-43029481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               39, 61
               

               Conread position:
               184-376
               

               Cow position:
               chr2:15229686-15229498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               185-383
               

               Cow position:
               chr2:12558367-12558570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               185-397
               

               Cow position:
               chr2:62861746-62861539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               133, 21
               

               Conread position:
               185-407
               

               Cow position:
               chr2:10655691-10655917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               33, 71
               

               Conread position:
               186-407
               

               Cow position:
               chr2:4383734-4383954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               186-407
               

               Cow position:
               chr2:70674887-70674669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               20, 57
               

               Conread position:
               188-406
               

               Cow position:
               chr2:71621881-71622106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               10, 124
               

               Conread position:
               190-383
               

               Cow position:
               chr2:11840778-11840594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               190-399
               

               Cow position:
               chr2:8821391-8821182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               177, 197
               

               Conread position:
               190-457
               

               Cow position:
               chr2:40880227-40879964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               191-407
               

               Cow position:
               chr2:53851597-53851378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               5, 119
               

               Conread position:
               191-451
               

               Cow position:
               chr2:67480134-67479868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               10, 175
               

               Conread position:
               192-406
               

               Cow position:
               chr2:46948735-46948946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               193-376
               

               Cow position:
               chr2:64773539-64773357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               151
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               181, 13
               

               Conread position:
               193-407
               

               Cow position:
               chr2:81928004-81927796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               13, 120
               

               Conread position:
               194-327
               

               Cow position:
               chr2:76182404-76182535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               194-341
               

               Cow position:
               chr2:69771270-69771124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               194-403
               

               Cow position:
               chr2:47097798-47097989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               194-406
               

               Cow position:
               chr2:72407345-72407552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               180, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr2:44191633-44191420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               180, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr2:61421014-61421226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               195-407
               

               Cow position:
               chr2:46124552-46124761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               195-407
               

               Cow position:
               chr2:72309860-72310063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               196-397
               

               Cow position:
               chr2:59952708-59952904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               196-400
               

               Cow position:
               chr2:16514928-16514732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 32
               

               Conread position:
               197-410
               

               Cow position:
               chr2:44217760-44217970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               181, 9
               

               Conread position:
               198-370
               

               Cow position:
               chr2:23147540-23147716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 8
               

               Conread position:
               198-407
               

               Cow position:
               chr2:44025526-44025317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               175, 33
               

               Conread position:
               199-407
               

               Cow position:
               chr2:46383316-46383523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               199-442
               

               Cow position:
               chr2:8843681-8843919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               210, 33
               

               Conread position:
               200-397
               

               Cow position:
               chr2:28285216-28285414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 6
               

               Conread position:
               200-407
               

               Cow position:
               chr2:12839896-12840101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               173, 6
               

               Conread position:
               201-407
               

               Cow position:
               chr2:66149472-66149272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               201-426
               

               Cow position:
               chr2:40257262-40257493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               25, 197
               

               Conread position:
               202-385
               

               Cow position:
               chr2:63718271-63718449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               205-372
               

               Cow position:
               chr2:60260849-60261015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               101, 15
               

               Conread position:
               205-405
               

               Cow position:
               chr2:20791290-20791487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 138
               

               Conread position:
               205-407
               

               Cow position:
               chr2:38362221-38362426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               206-372
               

               Cow position:
               chr2:57802344-57802512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               206-376
               

               Cow position:
               chr2:15219252-15219087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               206-377
               

               Cow position:
               chr2:33988173-33988346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr2:12051291-12051094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               167, 19
               

               Conread position:
               207-396
               

               Cow position:
               chr2:27180233-27180037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               207-407
               

               Cow position:
               chr2:22042683-22042477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               76, 120
               

               Conread position:
               208-330
               

               Cow position:
               chr2:39525606-39525481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               208-346
               

               Cow position:
               chr2:78669786-78669926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               124, 32
               

               Conread position:
               208-353
               

               Cow position:
               chr2:39418948-39419094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               208-407
               

               Cow position:
               chr2:29734956-29734765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               130, 27
               

               Conread position:
               209-405
               

               Cow position:
               chr2:45935827-45936015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               210-408
               

               Cow position:
               chr2:44007562-44007359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               14, 188
               

               Conread position:
               214-387
               

               Cow position:
               chr2:65830201-65830375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               9, 163
               

               Conread position:
               214-406
               

               Cow position:
               chr2:27337645-27337831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               9, 18
               

               Conread position:
               214-410
               

               Cow position:
               chr2:65587293-65587092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               215-407
               

               Cow position:
               chr2:192334-192524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               215-407
               

               Cow position:
               chr2:19137755-19137951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               215-407
               

               Cow position:
               chr2:29860137-29859952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               8, 98
               

               Conread position:
               216-342
               

               Cow position:
               chr2:64465642-64465769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-350
               

               Cow position:
               chr2:21950109-21949973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-388
               

               Cow position:
               chr2:39228942-39228778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               82, 7
               

               Conread position:
               216-398
               

               Cow position:
               chr2:17492384-17492563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 130
               

               Conread position:
               216-407
               

               Cow position:
               chr2:387641-387832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               7, 157
               

               Conread position:
               216-411
               

               Cow position:
               chr2:37113062-37113252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               217-407
               

               Cow position:
               chr2:42183505-42183311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               6, 42
               

               Conread position:
               218-383
               

               Cow position:
               chr2:32488536-32488692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               218-396
               

               Cow position:
               chr2:994233-994410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               5, 154
               

               Conread position:
               218-399
               

               Cow position:
               chr2:42801170-42800994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               5, 115
               

               Conread position:
               218-407
               

               Cow position:
               chr2:10439966-10439778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               5, 25
               

               Conread position:
               219-343
               

               Cow position:
               chr2:26361888-26361760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               219-407
               

               Cow position:
               chr2:24593996-24593813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               151, 21
               

               Conread position:
               219-426
               

               Cow position:
               chr2:46051182-46051380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               153, 56
               

               Conread position:
               221-372
               

               Cow position:
               chr2:43624405-43624557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 114
               

               Conread position:
               221-390
               

               Cow position:
               chr2:45138308-45138477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               153, 78
               

               Conread position:
               221-399
               

               Cow position:
               chr2:33554042-33554222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               221-400
               

               Cow position:
               chr2:14709992-14710163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               221-400
               

               Cow position:
               chr2:26500804-26500987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr2:27173495-27173312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr2:42255563-42255378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr2:70896163-70895975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr2:70908200-70908379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               85, 92
               

               Conread position:
               221-447
               

               Cow position:
               chr2:44065699-44065477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               214, 69
               

               Conread position:
               222-330
               

               Cow position:
               chr2:45907678-45907569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               222-353
               

               Cow position:
               chr2:40058612-40058743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-370
               

               Cow position:
               chr2:9543437-9543293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               222-380
               

               Cow position:
               chr2:79404217-79404061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               71, 12
               

               Conread position:
               222-382
               

               Cow position:
               chr2:65036159-65036313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               222-383
               

               Cow position:
               chr2:1073646-1073487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               222-383
               

               Cow position:
               chr2:29681956-29681804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               222-388
               

               Cow position:
               chr2:38640450-38640284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-388
               

               Cow position:
               chr2:60910317-60910152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-390
               

               Cow position:
               chr2:5300722-5300557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               31, 37
               

               Conread position:
               222-390
               

               Cow position:
               chr2:11631654-11631482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               64, 93
               

               Conread position:
               222-398
               

               Cow position:
               chr2:80903789-80903957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-399
               

               Cow position:
               chr2:1762919-1762743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               150, 90
               

               Conread position:
               222-400
               

               Cow position:
               chr2:45478470-45478645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               222-402
               

               Cow position:
               chr2:15872062-15871884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               142, 90
               

               Conread position:
               222-402
               

               Cow position:
               chr2:66480059-66480241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               222-403
               

               Cow position:
               chr2:46614528-46614349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               222-407
               

               Cow position:
               chr2:13369781-13369598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr2:19294714-19294534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               159, 69
               

               Conread position:
               222-407
               

               Cow position:
               chr2:38658660-38658840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               132, 117
               

               Conread position:
               222-407
               

               Cow position:
               chr2:39514162-39513966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               133, 161
               

               Conread position:
               222-407
               

               Cow position:
               chr2:40597696-40597516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               222-407
               

               Cow position:
               chr2:41040583-41040769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               148, 109
               

               Conread position:
               222-407
               

               Cow position:
               chr2:45642360-45642548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               63, 91
               

               Conread position:
               222-407
               

               Cow position:
               chr2:68190516-68190699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               124, 20
               

               Conread position:
               222-407
               

               Cow position:
               chr2:80275167-80275351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               222-426
               

               Cow position:
               chr2:60429407-60429201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               151, 48
               

               Conread position:
               222-445
               

               Cow position:
               chr2:55496169-55496381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               223-356
               

               Cow position:
               chr2:46053596-46053463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-364
               

               Cow position:
               chr2:25922535-25922395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 37
               

               Conread position:
               223-368
               

               Cow position:
               chr2:46014892-46014747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-371
               

               Cow position:
               chr2:22370821-22370965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               223-371
               

               Cow position:
               chr2:43990899-43990750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               223-372
               

               Cow position:
               chr2:49862779-49862631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               223-375
               

               Cow position:
               chr2:52466326-52466474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               223-377
               

               Cow position:
               chr2:69109223-69109377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-378
               

               Cow position:
               chr2:50566060-50565905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-381
               

               Cow position:
               chr2:50353018-50352859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               151, 17
               

               Conread position:
               223-384
               

               Cow position:
               chr2:1422474-1422316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               223-385
               

               Cow position:
               chr2:43131221-43131059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               223-388
               

               Cow position:
               chr2:43596028-43596195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               223-390
               

               Cow position:
               chr2:19211931-19212097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               159, 47
               

               Conread position:
               223-405
               

               Cow position:
               chr2:13582708-13582526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               153, 12
               

               Conread position:
               223-405
               

               Cow position:
               chr2:59396928-59397112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               153, 73
               

               Conread position:
               223-406
               

               Cow position:
               chr2:17940162-17940343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               141, 84
               

               Conread position:
               223-406
               

               Cow position:
               chr2:35988493-35988674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               151, 156
               

               Conread position:
               223-406
               

               Cow position:
               chr2:36017288-36017472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               153, 100
               

               Conread position:
               223-406
               

               Cow position:
               chr2:43444721-43444539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               11, 154
               

               Conread position:
               223-406
               

               Cow position:
               chr2:45542273-45542451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-406
               

               Cow position:
               chr2:49467755-49467571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               223-406
               

               Cow position:
               chr2:54968136-54967952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               223-406
               

               Cow position:
               chr2:68870817-68870634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 95
               

               Conread position:
               223-407
               

               Cow position:
               chr2:6039138-6038950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               151, 36
               

               Conread position:
               223-407
               

               Cow position:
               chr2:18997845-18997667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr2:24859138-24858950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               104, 41
               

               Conread position:
               223-407
               

               Cow position:
               chr2:28710878-28711059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               223-407
               

               Cow position:
               chr2:32660303-32660118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               150, 171
               

               Conread position:
               223-407
               

               Cow position:
               chr2:36963648-36963466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               160, 103
               

               Conread position:
               223-407
               

               Cow position:
               chr2:42970235-42970051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               145, 68
               

               Conread position:
               223-407
               

               Cow position:
               chr2:43474304-43474119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               67, 151
               

               Conread position:
               223-407
               

               Cow position:
               chr2:44022680-44022866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr2:63331676-63331862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr2:69579553-69579739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr2:80116220-80116040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               117, 30
               

               Conread position:
               223-457
               

               Cow position:
               chr2:53575522-53575281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               224-331
               

               Cow position:
               chr2:39242480-39242373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-346
               

               Cow position:
               chr2:13468338-13468218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               224-383
               

               Cow position:
               chr2:31355822-31355664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               224-384
               

               Cow position:
               chr2:1335570-1335731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr2:777562-777745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               224-407
               

               Cow position:
               chr2:30351581-30351764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               138, 149
               

               Conread position:
               224-407
               

               Cow position:
               chr2:44550723-44550900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               10, 89
               

               Conread position:
               224-407
               

               Cow position:
               chr2:45624139-45623959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr2:68328728-68328910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               95, 145
               

               Conread position:
               225-381
               

               Cow position:
               chr2:50913892-50914044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               225-407
               

               Cow position:
               chr2:84480377-84480561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               225-441
               

               Cow position:
               chr2:65932089-65931873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               226-380
               

               Cow position:
               chr2:24530491-24530337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr2:33262494-33262671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               156, 27
               

               Conread position:
               227-335
               

               Cow position:
               chr2:68397483-68397591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               228-393
               

               Cow position:
               chr2:42192558-42192392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               153, 43
               

               Conread position:
               228-406
               

               Cow position:
               chr2:31500122-31499942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               90, 146
               

               Conread position:
               228-407
               

               Cow position:
               chr2:14734224-14734052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               230-378
               

               Cow position:
               chr2:49966650-49966502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 36
               

               Conread position:
               230-383
               

               Cow position:
               chr2:73450500-73450652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               230-400
               

               Cow position:
               chr2:46230644-46230811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               230-405
               

               Cow position:
               chr2:17409888-17410060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               230-405
               

               Cow position:
               chr2:19502366-19502537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               142, 38
               

               Conread position:
               230-407
               

               Cow position:
               chr2:70495388-70495215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               6, 52
               

               Conread position:
               231-331
               

               Cow position:
               chr2:38950003-38950103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-339
               

               Cow position:
               chr2:46300729-46300621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-347
               

               Cow position:
               chr2:36117367-36117251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-362
               

               Cow position:
               chr2:46316988-46316859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               231-365
               

               Cow position:
               chr2:16847299-16847168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               108, 81
               

               Conread position:
               231-371
               

               Cow position:
               chr2:7478824-7478973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               108, 63
               

               Conread position:
               231-371
               

               Cow position:
               chr2:39350372-39350515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               101, 78
               

               Conread position:
               231-372
               

               Cow position:
               chr2:32988685-32988542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr2:59974521-59974661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               108, 79
               

               Conread position:
               231-373
               

               Cow position:
               chr2:39363120-39362978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-376
               

               Cow position:
               chr2:46164383-46164527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               231-377
               

               Cow position:
               chr2:21049212-21049356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               141, 81
               

               Conread position:
               231-378
               

               Cow position:
               chr2:4445699-4445837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               231-378
               

               Cow position:
               chr2:24722153-24722301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-378
               

               Cow position:
               chr2:38837399-38837545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-379
               

               Cow position:
               chr2:16488108-16487958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-380
               

               Cow position:
               chr2:23301849-23301702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-380
               

               Cow position:
               chr2:45510442-45510591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               141, 80
               

               Conread position:
               231-381
               

               Cow position:
               chr2:14826394-14826244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-382
               

               Cow position:
               chr2:28303437-28303287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               231-382
               

               Cow position:
               chr2:79837608-79837758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-383
               

               Cow position:
               chr2:39334753-39334907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 130
               

               Conread position:
               231-388
               

               Cow position:
               chr2:12988702-12988550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               148, 22
               

               Conread position:
               231-390
               

               Cow position:
               chr2:56846865-56846706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               144, 96
               

               Conread position:
               231-391
               

               Cow position:
               chr2:26805999-26806156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               141, 80
               

               Conread position:
               231-399
               

               Cow position:
               chr2:15058947-15059112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               231-403
               

               Cow position:
               chr2:17966911-17967083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               148, 111
               

               Conread position:
               231-403
               

               Cow position:
               chr2:37791378-37791550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               231-404
               

               Cow position:
               chr2:29121999-29121826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               143, 60
               

               Conread position:
               231-404
               

               Cow position:
               chr2:40466753-40466579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               143, 163
               

               Conread position:
               231-404
               

               Cow position:
               chr2:46247343-46247514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr2:84970595-84970770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr2:23270815-23270986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               150, 124
               

               Conread position:
               231-406
               

               Cow position:
               chr2:40728468-40728297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr2:41622599-41622424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               231-406
               

               Cow position:
               chr2:44482537-44482703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr2:46971242-46971062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr2:76762334-76762159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               145, 162
               

               Conread position:
               231-407
               

               Cow position:
               chr2:7524014-7524192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr2:12686672-12686849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr2:13354795-13354618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               231-407
               

               Cow position:
               chr2:17328868-17328691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               139, 166
               

               Conread position:
               231-407
               

               Cow position:
               chr2:31460217-31460388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr2:41462306-41462485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr2:42293368-42293193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               142, 30
               

               Conread position:
               231-407
               

               Cow position:
               chr2:43123457-43123280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr2:43995054-43994874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr2:46120524-46120700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               142, 102
               

               Conread position:
               231-407
               

               Cow position:
               chr2:54700574-54700394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               149
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr2:55632893-55632720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr2:62743891-62744067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               136, 80
               

               Conread position:
               231-407
               

               Cow position:
               chr2:65890508-65890680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr2:67386356-67386537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               119, 103
               

               Conread position:
               231-407
               

               Cow position:
               chr2:67595902-67596080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               231-407
               

               Cow position:
               chr2:70704376-70704197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr2:80177473-80177647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               146, 68
               

               Conread position:
               231-407
               

               Cow position:
               chr2:80963531-80963704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               231-407
               

               Cow position:
               chr2:83410624-83410452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 83
               

               Conread position:
               231-440
               

               Cow position:
               chr2:46119650-46119850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               178, 84
               

               Conread position:
               231-440
               

               Cow position:
               chr2:53500917-53501128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               232-329
               

               Cow position:
               chr2:70449140-70449046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               232-372
               

               Cow position:
               chr2:71486895-71486755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-376
               

               Cow position:
               chr2:77941553-77941696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               232-383
               

               Cow position:
               chr2:30954480-30954630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               232-383
               

               Cow position:
               chr2:53430832-53430687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               232-405
               

               Cow position:
               chr2:61196857-61196688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr2:16428284-16428459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               140, 79
               

               Conread position:
               232-407
               

               Cow position:
               chr2:26102884-26102715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr2:28820480-28820305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               142, 10
               

               Conread position:
               232-407
               

               Cow position:
               chr2:39564469-39564296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               141, 12
               

               Conread position:
               232-407
               

               Cow position:
               chr2:80770233-80770060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 90
               

               Conread position:
               232-407
               

               Cow position:
               chr2:81348759-81348939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 146
               

               Conread position:
               232-407
               

               Cow position:
               chr2:84564330-84564500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               144, 66
               

               Conread position:
               232-460
               

               Cow position:
               chr2:59427566-59427337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               142, 101
               

               Conread position:
               233-366
               

               Cow position:
               chr2:60368432-60368299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-367
               

               Cow position:
               chr2:12332646-12332512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-371
               

               Cow position:
               chr2:39095470-39095334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               233-381
               

               Cow position:
               chr2:10790287-10790137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 79
               

               Conread position:
               233-386
               

               Cow position:
               chr2:43907073-43907227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               142, 58
               

               Conread position:
               233-387
               

               Cow position:
               chr2:54052118-54052277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               233-387
               

               Cow position:
               chr2:75227319-75227163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               233-405
               

               Cow position:
               chr2:13645434-13645264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               233-405
               

               Cow position:
               chr2:39371531-39371358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               128, 54
               

               Conread position:
               233-407
               

               Cow position:
               chr2:15348509-15348333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr2:73789875-73790055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               233-408
               

               Cow position:
               chr2:56003353-56003179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               234-343
               

               Cow position:
               chr2:40431686-40431795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               234-388
               

               Cow position:
               chr2:7194323-7194173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               234-391
               

               Cow position:
               chr2:16889941-16890096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               142, 78
               

               Conread position:
               234-407
               

               Cow position:
               chr2:6901891-6901721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr2:29290202-29290366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr2:48634930-48635102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               140, 145
               

               Conread position:
               235-343
               

               Cow position:
               chr2:71163453-71163561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-372
               

               Cow position:
               chr2:24218102-24218239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               235-378
               

               Cow position:
               chr2:41007425-41007571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               235-385
               

               Cow position:
               chr2:9725990-9726133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               235-389
               

               Cow position:
               chr2:45367407-45367262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               235-391
               

               Cow position:
               chr2:73544785-73544931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               139, 30
               

               Conread position:
               235-399
               

               Cow position:
               chr2:17841879-17842033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               235-403
               

               Cow position:
               chr2:13013204-13013035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               138, 146
               

               Conread position:
               235-405
               

               Cow position:
               chr2:1304063-1303893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-406
               

               Cow position:
               chr2:48525426-48525599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               59, 126
               

               Conread position:
               235-406
               

               Cow position:
               chr2:51638666-51638499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 91
               

               Conread position:
               235-407
               

               Cow position:
               chr2:13935821-13935647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               141, 65
               

               Conread position:
               235-407
               

               Cow position:
               chr2:15250295-15250121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               137, 50
               

               Conread position:
               235-407
               

               Cow position:
               chr2:15674654-15674486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               145, 19
               

               Conread position:
               235-407
               

               Cow position:
               chr2:26851277-26851105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               147, 67
               

               Conread position:
               235-407
               

               Cow position:
               chr2:32446227-32446392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr2:41461483-41461308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr2:47990551-47990378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr2:60691000-60690821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               47, 140
               

               Conread position:
               235-407
               

               Cow position:
               chr2:64323354-64323185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 138
               

               Conread position:
               235-407
               

               Cow position:
               chr2:69823704-69823530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               145
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr2:73353906-73353735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               123, 77
               

               Conread position:
               236-349
               

               Cow position:
               chr2:11217905-11217792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-390
               

               Cow position:
               chr2:81480959-81480810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               237-347
               

               Cow position:
               chr2:61181740-61181630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               237-406
               

               Cow position:
               chr2:43835450-43835618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               61, 7
               

               Conread position:
               237-407
               

               Cow position:
               chr2:23847723-23847885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               136, 63
               

               Conread position:
               237-407
               

               Cow position:
               chr2:44232341-44232508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               238-403
               

               Cow position:
               chr2:26438613-26438779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 85
               

               Conread position:
               238-406
               

               Cow position:
               chr2:52596622-52596782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               143, 23
               

               Conread position:
               238-407
               

               Cow position:
               chr2:30817079-30816905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               59, 75
               

               Conread position:
               242-407
               

               Cow position:
               chr2:14901241-14901081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               149, 30
               

               Conread position:
               242-407
               

               Cow position:
               chr2:36575842-36575683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               5, 15
               

               Conread position:
               242-407
               

               Cow position:
               chr2:39815177-39815342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-349
               

               Cow position:
               chr2:46169992-46170098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-373
               

               Cow position:
               chr2:45640990-45640865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               243-376
               

               Cow position:
               chr2:50580468-50580337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               243-381
               

               Cow position:
               chr2:14349874-14349736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               52, 129
               

               Conread position:
               243-407
               

               Cow position:
               chr2:1487277-1487116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr2:21380297-21380454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr2:41382109-41381944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr2:78197974-78197815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               244-372
               

               Cow position:
               chr2:84550173-84550044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               244-381
               

               Cow position:
               chr2:66242108-66242240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               244-400
               

               Cow position:
               chr2:15597373-15597527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 57
               

               Conread position:
               244-407
               

               Cow position:
               chr2:55062982-55062828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               245-368
               

               Cow position:
               chr2:46126034-46126154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               247-371
               

               Cow position:
               chr2:55831551-55831674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               248-406
               

               Cow position:
               chr2:46055044-46055196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               248-407
               

               Cow position:
               chr2:54790383-54790225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               36, 137
               

               Conread position:
               248-407
               

               Cow position:
               chr2:70945505-70945344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               249-407
               

               Cow position:
               chr2:68292867-68292710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               132, 9
               

               Conread position:
               250-379
               

               Cow position:
               chr2:37072896-37072769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               250-407
               

               Cow position:
               chr2:26880181-26880026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               124, 80
               

               Conread position:
               252-407
               

               Cow position:
               chr2:42936112-42936269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               122, 143
               

               Conread position:
               253-371
               

               Cow position:
               chr2:73360017-73360133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               254-406
               

               Cow position:
               chr2:5999042-5998889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               255-385
               

               Cow position:
               chr2:1656713-1656586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               255-406
               

               Cow position:
               chr2:16564771-16564631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               256-407
               

               Cow position:
               chr2:52747227-52747379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               257-406
               

               Cow position:
               chr2:32431644-32431796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               96, 82
               

               Conread position:
               261-406
               

               Cow position:
               chr2:46406422-46406262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr2:45281737-45281592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               121, 7
               

               Conread position:
               262-407
               

               Cow position:
               chr2:32989676-32989826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               67, 115
               

               Conread position:
               263-407
               

               Cow position:
               chr2:39223743-39223591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               276-407
               

               Cow position:
               chr2:19156111-19156241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               277-407
               

               Cow position:
               chr2:28751000-28750872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               288-407
               

               Cow position:
               chr2:34535096-34535214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               293-407
               

               Cow position:
               chr2:45880720-45880836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               294-407
               

               Cow position:
               chr2:67313634-67313747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               294-407
               

               Cow position:
               chr2:67318049-67318162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-326
               

               Cow position:
               chr20:15547484-15547255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 91
               

               Conread position:
               83-352
               

               Cow position:
               chr20:15847041-15846794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               85-215
               

               Cow position:
               chr20:19090548-19090683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               86-406
               

               Cow position:
               chr20:23870538-23870835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               284, 71
               

               Conread position:
               88-407
               

               Cow position:
               chr20:9537424-9537121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 91
               

               Conread position:
               93-406
               

               Cow position:
               chr20:21715040-21714741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 85
               

               Conread position:
               93-407
               

               Cow position:
               chr20:34777477-34777164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 13
               

               Conread position:
               94-222
               

               Cow position:
               chr20:24310691-24310815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-297
               

               Cow position:
               chr20:18100877-18100677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               94-406
               

               Cow position:
               chr20:33438706-33438994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               95-176
               

               Cow position:
               chr20:29755027-29754946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               73
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-407
               

               Cow position:
               chr20:34901880-34901553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               45, 64
               

               Conread position:
               97-211
               

               Cow position:
               chr20:9700448-9700564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 83
               

               Conread position:
               97-348
               

               Cow position:
               chr20:36023111-36023357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               99-226
               

               Cow position:
               chr20:10788669-10788792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               99-407
               

               Cow position:
               chr20:9923836-9923567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               100-271
               

               Cow position:
               chr20:32447713-32447532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               101-305
               

               Cow position:
               chr20:32627289-32627094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               101-310
               

               Cow position:
               chr20:24522587-24522378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               89, 77
               

               Conread position:
               101-407
               

               Cow position:
               chr20:6890986-6890699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               105-355
               

               Cow position:
               chr20:30027613-30027384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               46, 69
               

               Conread position:
               106-380
               

               Cow position:
               chr20:13944038-13943776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               106-407
               

               Cow position:
               chr20:20056217-20056500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 61
               

               Conread position:
               116-447
               

               Cow position:
               chr20:17846228-17845899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 64
               

               Conread position:
               119-407
               

               Cow position:
               chr20:16548016-16548293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               121-386
               

               Cow position:
               chr20:26723412-26723672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               131-406
               

               Cow position:
               chr20:13983623-13983340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               46, 134
               

               Conread position:
               139-381
               

               Cow position:
               chr20:32988573-32988820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               34, 143
               

               Conread position:
               139-407
               

               Cow position:
               chr20:40158134-40157885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               152-406
               

               Cow position:
               chr20:15822786-15822538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               21, 40
               

               Conread position:
               155-379
               

               Cow position:
               chr20:12085197-12085421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               161-350
               

               Cow position:
               chr20:26058996-26059190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               162-379
               

               Cow position:
               chr20:35207978-35208193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               166-345
               

               Cow position:
               chr20:3359104-3359286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               167-404
               

               Cow position:
               chr20:6603265-6603027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               22, 69
               

               Conread position:
               168-327
               

               Cow position:
               chr20:35211038-35211196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               169-347
               

               Cow position:
               chr20:24392396-24392226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               169-383
               

               Cow position:
               chr20:11038807-11038590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 99
               

               Conread position:
               170-407
               

               Cow position:
               chr20:5636699-5636468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               36, 8
               

               Conread position:
               172-407
               

               Cow position:
               chr20:33532521-33532290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               191, 53
               

               Conread position:
               178-366
               

               Cow position:
               chr20:11444287-11444104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               178-406
               

               Cow position:
               chr20:12995795-12996025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               180-407
               

               Cow position:
               chr20:39728662-39728433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               122, 101
               

               Conread position:
               184-380
               

               Cow position:
               chr20:206447-206639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               188, 12
               

               Conread position:
               186-352
               

               Cow position:
               chr20:36671233-36671393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               128, 21
               

               Conread position:
               190-407
               

               Cow position:
               chr20:1576294-1576077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               190-407
               

               Cow position:
               chr20:23506273-23506485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               194-406
               

               Cow position:
               chr20:28067229-28067442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               180, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr20:38578570-38578778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               179, 12
               

               Conread position:
               195-325
               

               Cow position:
               chr20:37228888-37229018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               195-441
               

               Cow position:
               chr20:38551562-38551325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 60
               

               Conread position:
               196-397
               

               Cow position:
               chr20:7363157-7362959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               178, 117
               

               Conread position:
               196-407
               

               Cow position:
               chr20:32866001-32866205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 14
               

               Conread position:
               197-406
               

               Cow position:
               chr20:23064638-23064845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               9, 116
               

               Conread position:
               199-407
               

               Cow position:
               chr20:20739094-20739302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               7, 135
               

               Conread position:
               202-373
               

               Cow position:
               chr20:34202822-34202652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               150, 18
               

               Conread position:
               205-336
               

               Cow position:
               chr20:2823056-2822925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-394
               

               Cow position:
               chr20:33820642-33820454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 56
               

               Conread position:
               205-407
               

               Cow position:
               chr20:11481949-11482150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr20:15568765-15568961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr20:21929091-21928890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               18, 166
               

               Conread position:
               207-383
               

               Cow position:
               chr20:35365224-35365052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               162, 23
               

               Conread position:
               208-407
               

               Cow position:
               chr20:15565645-15565841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               16, 84
               

               Conread position:
               208-407
               

               Cow position:
               chr20:38090092-38089896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               157, 22
               

               Conread position:
               209-346
               

               Cow position:
               chr20:2148011-2148147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               209-407
               

               Cow position:
               chr20:5078809-5078608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               210-405
               

               Cow position:
               chr20:29845231-29845036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               164, 46
               

               Conread position:
               210-406
               

               Cow position:
               chr20:20099418-20099610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               10, 32
               

               Conread position:
               211-402
               

               Cow position:
               chr20:33363697-33363504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               177, 42
               

               Conread position:
               216-343
               

               Cow position:
               chr20:26930383-26930257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               216-349
               

               Cow position:
               chr20:7622807-7622939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 71
               

               Conread position:
               216-394
               

               Cow position:
               chr20:7426021-7426200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr20:5385569-5385755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               217-407
               

               Cow position:
               chr20:7441965-7442143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               218-400
               

               Cow position:
               chr20:11101584-11101403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               16, 48
               

               Conread position:
               218-426
               

               Cow position:
               chr20:19237248-19237043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               219-384
               

               Cow position:
               chr20:40782133-40781970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               219-406
               

               Cow position:
               chr20:29084213-29084404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               219-407
               

               Cow position:
               chr20:8429913-8429734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               5, 39
               

               Conread position:
               219-407
               

               Cow position:
               chr20:17251889-17251700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               153
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               160, 115
               

               Conread position:
               219-407
               

               Cow position:
               chr20:22485035-22484847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               15, 111
               

               Conread position:
               221-381
               

               Cow position:
               chr20:30744550-30744710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               14, 151
               

               Conread position:
               221-396
               

               Cow position:
               chr20:361020-361190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr20:9433759-9433570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr20:11188637-11188814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               222-389
               

               Cow position:
               chr20:23846495-23846666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               222-397
               

               Cow position:
               chr20:14879956-14879781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               151, 9
               

               Conread position:
               222-400
               

               Cow position:
               chr20:30710468-30710647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               110, 25
               

               Conread position:
               222-406
               

               Cow position:
               chr20:13652198-13652381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr20:4755664-4755847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               222-407
               

               Cow position:
               chr20:14980337-14980528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               78, 31
               

               Conread position:
               222-407
               

               Cow position:
               chr20:16941119-16941306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               151, 107
               

               Conread position:
               222-407
               

               Cow position:
               chr20:19751476-19751292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr20:20984161-20983981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr20:21345602-21345412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               152
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr20:21428328-21428144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               120, 39
               

               Conread position:
               222-407
               

               Cow position:
               chr20:34221646-34221466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr20:36633983-36633803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               16, 87
               

               Conread position:
               222-448
               

               Cow position:
               chr20:13023332-13023554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               21, 37
               

               Conread position:
               223-327
               

               Cow position:
               chr20:15515272-15515376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-343
               

               Cow position:
               chr20:8021294-8021174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-346
               

               Cow position:
               chr20:24002769-24002646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-350
               

               Cow position:
               chr20:31845117-31845244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               223-369
               

               Cow position:
               chr20:7416999-7417145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-370
               

               Cow position:
               chr20:17388700-17388552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               223-374
               

               Cow position:
               chr20:40303719-40303866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               223-376
               

               Cow position:
               chr20:14917453-14917300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-379
               

               Cow position:
               chr20:23590581-23590735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               223-389
               

               Cow position:
               chr20:32847513-32847348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               223-393
               

               Cow position:
               chr20:35727762-35727937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               223-402
               

               Cow position:
               chr20:11008338-11008158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               223-405
               

               Cow position:
               chr20:29990280-29990456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-406
               

               Cow position:
               chr20:12534572-12534756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               27, 93
               

               Conread position:
               223-407
               

               Cow position:
               chr20:14564219-14564038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 67
               

               Conread position:
               223-407
               

               Cow position:
               chr20:20898422-20898606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               151, 178
               

               Conread position:
               223-407
               

               Cow position:
               chr20:20967489-20967303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               152
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr20:23850788-23850605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr20:24712009-24711820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               224-376
               

               Cow position:
               chr20:20934566-20934717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr20:3599231-3599410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               46, 90
               

               Conread position:
               224-407
               

               Cow position:
               chr20:10772372-10772188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               224-407
               

               Cow position:
               chr20:11135586-11135778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr20:21372475-21372291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr20:29805492-29805677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               154, 56
               

               Conread position:
               224-407
               

               Cow position:
               chr20:33434993-33435182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               88, 41
               

               Conread position:
               224-407
               

               Cow position:
               chr20:35192932-35192762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               225-407
               

               Cow position:
               chr20:39398647-39398470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               226-406
               

               Cow position:
               chr20:6096330-6096508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr20:5644952-5644771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               147, 63
               

               Conread position:
               226-407
               

               Cow position:
               chr20:42197478-42197304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               230-329
               

               Cow position:
               chr20:18396086-18395987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-329
               

               Cow position:
               chr20:13617386-13617288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-342
               

               Cow position:
               chr20:8821578-8821687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               231-349
               

               Cow position:
               chr20:2316265-2316383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-353
               

               Cow position:
               chr20:21721370-21721248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-366
               

               Cow position:
               chr20:36312348-36312483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-371
               

               Cow position:
               chr20:5703632-5703491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               231-373
               

               Cow position:
               chr20:5365086-5364948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-382
               

               Cow position:
               chr20:40127183-40127335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-386
               

               Cow position:
               chr20:20158296-20158140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr20:3141733-3141574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               140, 25
               

               Conread position:
               231-397
               

               Cow position:
               chr20:4334369-4334535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               28, 141
               

               Conread position:
               231-399
               

               Cow position:
               chr20:9412648-9412478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               231-400
               

               Cow position:
               chr20:4945094-4945257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               231-400
               

               Cow position:
               chr20:41473583-41473749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 88
               

               Conread position:
               231-404
               

               Cow position:
               chr20:10208968-10208793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               103, 38
               

               Conread position:
               231-405
               

               Cow position:
               chr20:4332294-4332117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               21, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr20:5814726-5814555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-406
               

               Cow position:
               chr20:22959188-22959358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr20:33144393-33144567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr20:354741-354912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr20:18392111-18392276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr20:34097793-34097973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr20:35906890-35907067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               78, 146
               

               Conread position:
               231-407
               

               Cow position:
               chr20:39016712-39016892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               231-407
               

               Cow position:
               chr20:42469919-42469743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               143, 77
               

               Conread position:
               231-408
               

               Cow position:
               chr20:16291848-16291677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               231-450
               

               Cow position:
               chr20:36207974-36207747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               113, 207
               

               Conread position:
               232-379
               

               Cow position:
               chr20:23678556-23678706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               232-387
               

               Cow position:
               chr20:14283079-14282924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-388
               

               Cow position:
               chr20:15589202-15589045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               96, 149
               

               Conread position:
               232-405
               

               Cow position:
               chr20:6248442-6248617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               232-406
               

               Cow position:
               chr20:16492232-16492057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               103, 143
               

               Conread position:
               232-407
               

               Cow position:
               chr20:6054350-6054531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr20:12126145-12126320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               140, 161
               

               Conread position:
               232-407
               

               Cow position:
               chr20:14100276-14100449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               147, 89
               

               Conread position:
               232-407
               

               Cow position:
               chr20:28594446-28594267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               62, 77
               

               Conread position:
               232-407
               

               Cow position:
               chr20:39417744-39417911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               233-400
               

               Cow position:
               chr20:41627183-41627357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 20
               

               Conread position:
               233-402
               

               Cow position:
               chr20:6372405-6372571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               146, 42
               

               Conread position:
               233-402
               

               Cow position:
               chr20:35741926-35741755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               233-403
               

               Cow position:
               chr20:6240363-6240533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               148, 56
               

               Conread position:
               233-407
               

               Cow position:
               chr20:580762-580939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr20:10200504-10200327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr20:40511598-40511774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               141, 122
               

               Conread position:
               233-449
               

               Cow position:
               chr20:24902135-24902356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               141, 200
               

               Conread position:
               234-407
               

               Cow position:
               chr20:23541003-23541172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               235-338
               

               Cow position:
               chr20:41274741-41274845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               235-346
               

               Cow position:
               chr20:6053312-6053423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-376
               

               Cow position:
               chr20:13752381-13752239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 128
               

               Conread position:
               235-381
               

               Cow position:
               chr20:4002250-4002107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               235-389
               

               Cow position:
               chr20:10818084-10818236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-390
               

               Cow position:
               chr20:2742981-2743136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               147, 136
               

               Conread position:
               235-390
               

               Cow position:
               chr20:5755569-5755408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               235-400
               

               Cow position:
               chr20:31323943-31323778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               135, 76
               

               Conread position:
               235-407
               

               Cow position:
               chr20:11359476-11359645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               100, 108
               

               Conread position:
               235-407
               

               Cow position:
               chr20:31081194-31081025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               137, 104
               

               Conread position:
               235-407
               

               Cow position:
               chr20:34108261-34108096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr20:33067205-33067381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               236-451
               

               Cow position:
               chr20:37919211-37919425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               18, 139
               

               Conread position:
               237-407
               

               Cow position:
               chr20:9266952-9267123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               6, 38
               

               Conread position:
               237-407
               

               Cow position:
               chr20:9376623-9376453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               129, 67
               

               Conread position:
               238-407
               

               Cow position:
               chr20:13025457-13025631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               243-406
               

               Cow position:
               chr20:14572216-14572378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               88, 28
               

               Conread position:
               243-407
               

               Cow position:
               chr20:11548576-11548737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr20:14620153-14620325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr20:14759517-14759676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               247-347
               

               Cow position:
               chr20:15488850-15488750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr20:6424112-6423956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               17, 74
               

               Conread position:
               253-407
               

               Cow position:
               chr20:28955563-28955717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               257-407
               

               Cow position:
               chr20:35797743-35797593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               117, 55
               

               Conread position:
               258-407
               

               Cow position:
               chr20:17765198-17765344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr20:24000666-24000813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               25, 110
               

               Conread position:
               262-407
               

               Cow position:
               chr20:34001261-34001408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               111, 20
               

               Conread position:
               268-383
               

               Cow position:
               chr20:16715515-16715397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               275-406
               

               Cow position:
               chr20:22313044-22313176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 129
               

               Conread position:
               293-407
               

               Cow position:
               chr20:35958746-35958630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               304-407
               

               Cow position:
               chr20:13967169-13967275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               81-324
               

               Cow position:
               chr21:1264742-1264509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               240, 24
               

               Conread position:
               85-384
               

               Cow position:
               chr21:17265674-17265972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 52
               

               Conread position:
               86-176
               

               Cow position:
               chr21:12074899-12074989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               78
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               88-228
               

               Cow position:
               chr21:7089430-7089287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               91, 119
               

               Conread position:
               89-214
               

               Cow position:
               chr21:41216836-41216710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               89-225
               

               Cow position:
               chr21:30145355-30145489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               89-379
               

               Cow position:
               chr21:27625026-27624731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               85, 134
               

               Conread position:
               89-403
               

               Cow position:
               chr21:33351050-33350749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               14, 49
               

               Conread position:
               90-381
               

               Cow position:
               chr21:2809859-2810129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               91-407
               

               Cow position:
               chr21:13365639-13365345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               282, 77
               

               Conread position:
               94-204
               

               Cow position:
               chr21:29485544-29485433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               92, 84
               

               Conread position:
               94-226
               

               Cow position:
               chr21:14633934-14633803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               107, 16
               

               Conread position:
               94-252
               

               Cow position:
               chr21:48285135-48285288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               91, 53
               

               Conread position:
               94-357
               

               Cow position:
               chr21:5130043-5130313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 84
               

               Conread position:
               94-382
               

               Cow position:
               chr21:44672045-44671775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               186, 16
               

               Conread position:
               96-227
               

               Cow position:
               chr21:8626101-8625970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               90, 9
               

               Conread position:
               97-388
               

               Cow position:
               chr21:30120015-30119720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               99-407
               

               Cow position:
               chr21:42384802-42384515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               100-298
               

               Cow position:
               chr21:19927701-19927500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               80, 34
               

               Conread position:
               100-369
               

               Cow position:
               chr21:26567456-26567735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               212
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               101-267
               

               Cow position:
               chr21:16862165-16862324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               95, 32
               

               Conread position:
               101-343
               

               Cow position:
               chr21:12200415-12200169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               101-394
               

               Cow position:
               chr21:46470485-46470204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               95, 48
               

               Conread position:
               101-406
               

               Cow position:
               chr21:10515100-10514810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               6, 71
               

               Conread position:
               101-407
               

               Cow position:
               chr21:39401907-39401599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               95, 77
               

               Conread position:
               101-424
               

               Cow position:
               chr21:7268573-7268898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               104, 77
               

               Conread position:
               109-356
               

               Cow position:
               chr21:265916-265680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               110-363
               

               Cow position:
               chr21:28823918-28824176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               116-284
               

               Cow position:
               chr21:7460196-7460017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               116-407
               

               Cow position:
               chr21:28191334-28191036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               68, 222
               

               Conread position:
               134-402
               

               Cow position:
               chr21:18940287-18940564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               44, 153
               

               Conread position:
               140-407
               

               Cow position:
               chr21:33563283-33563015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               48, 38
               

               Conread position:
               146-420
               

               Cow position:
               chr21:30157554-30157816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               224, 32
               

               Conread position:
               155-407
               

               Cow position:
               chr21:36910189-36909940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               161-402
               

               Cow position:
               chr21:19359924-19360167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               45, 219
               

               Conread position:
               162-381
               

               Cow position:
               chr21:15279920-15279690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               35, 43
               

               Conread position:
               162-400
               

               Cow position:
               chr21:5898147-5898389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               15, 29
               

               Conread position:
               168-345
               

               Cow position:
               chr21:5136963-5137141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               168-407
               

               Cow position:
               chr21:10633393-10633635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               169-403
               

               Cow position:
               chr21:734834-734605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               27, 127
               

               Conread position:
               171-376
               

               Cow position:
               chr21:42236690-42236485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               32, 92
               

               Conread position:
               171-399
               

               Cow position:
               chr21:27568933-27569158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               171-407
               

               Cow position:
               chr21:36508474-36508246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               176-439
               

               Cow position:
               chr21:36682557-36682294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               198, 14
               

               Conread position:
               179-406
               

               Cow position:
               chr21:42841367-42841594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               7, 42
               

               Conread position:
               180-407
               

               Cow position:
               chr21:396102-395875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               8, 146
               

               Conread position:
               187-389
               

               Cow position:
               chr21:26753718-26753516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               187-407
               

               Cow position:
               chr21:45920836-45921053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               188-407
               

               Cow position:
               chr21:10538029-10538247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               192-337
               

               Cow position:
               chr21:25159392-25159247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 14
               

               Conread position:
               193-385
               

               Cow position:
               chr21:11057663-11057853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               193-385
               

               Cow position:
               chr21:42562843-42562658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               179, 13
               

               Conread position:
               194-362
               

               Cow position:
               chr21:14228060-14228230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-378
               

               Cow position:
               chr21:13164074-13163893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-406
               

               Cow position:
               chr21:30256059-30256264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               49, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr21:36795822-36795605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               195-341
               

               Cow position:
               chr21:42131139-42131284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               195-379
               

               Cow position:
               chr21:7681312-7681132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               196-332
               

               Cow position:
               chr21:40305160-40305023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               196-407
               

               Cow position:
               chr21:24642729-24642525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               10, 76
               

               Conread position:
               197-341
               

               Cow position:
               chr21:12755027-12754883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               197-407
               

               Cow position:
               chr21:26245126-26244923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               199-380
               

               Cow position:
               chr21:44591997-44592176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               199-407
               

               Cow position:
               chr21:28924324-28924115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               200-407
               

               Cow position:
               chr21:18790354-18790554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               203-406
               

               Cow position:
               chr21:19514059-19513871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               147, 17
               

               Conread position:
               203-407
               

               Cow position:
               chr21:37344893-37345092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               205-383
               

               Cow position:
               chr21:41610379-41610198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               15, 171
               

               Conread position:
               206-331
               

               Cow position:
               chr21:37361037-37361161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               206-397
               

               Cow position:
               chr21:29485184-29484994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               168, 100
               

               Conread position:
               206-400
               

               Cow position:
               chr21:10673328-10673138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               206-405
               

               Cow position:
               chr21:23587088-23586887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               13, 52
               

               Conread position:
               206-407
               

               Cow position:
               chr21:8206975-8206773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               166, 22
               

               Conread position:
               206-407
               

               Cow position:
               chr21:47763914-47764110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               206-444
               

               Cow position:
               chr21:28237502-28237743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               163, 94
               

               Conread position:
               208-407
               

               Cow position:
               chr21:13395801-13395601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               208-445
               

               Cow position:
               chr21:47244-47005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               209-377
               

               Cow position:
               chr21:45473554-45473724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               210-341
               

               Cow position:
               chr21:8986223-8986093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               212-407
               

               Cow position:
               chr21:4400004-4399808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               11, 144
               

               Conread position:
               214-407
               

               Cow position:
               chr21:23672946-23672755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               215-368
               

               Cow position:
               chr21:25014836-25014982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               215-381
               

               Cow position:
               chr21:17063118-17062956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               215-387
               

               Cow position:
               chr21:5153815-5153648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               216-401
               

               Cow position:
               chr21:5464945-5464758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               7, 122
               

               Conread position:
               216-406
               

               Cow position:
               chr21:41579953-41579758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr21:3585168-3585362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               155
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               7, 190
               

               Conread position:
               217-400
               

               Cow position:
               chr21:4281684-4281861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 52
               

               Conread position:
               219-347
               

               Cow position:
               chr21:9346615-9346487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               221-374
               

               Cow position:
               chr21:802126-802279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr21:29978566-29978755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               11, 152
               

               Conread position:
               221-407
               

               Cow position:
               chr21:30848750-30848943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr21:46848937-46849122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               222-326
               

               Cow position:
               chr21:7424824-7424928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-332
               

               Cow position:
               chr21:28617978-28617868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-341
               

               Cow position:
               chr21:5214541-5214419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               222-343
               

               Cow position:
               chr21:29418758-29418639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               222-354
               

               Cow position:
               chr21:48482340-48482470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               222-362
               

               Cow position:
               chr21:82257-82117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-368
               

               Cow position:
               chr21:41041135-41040988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               10, 24
               

               Conread position:
               222-369
               

               Cow position:
               chr21:13225905-13225758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               222-370
               

               Cow position:
               chr21:22939960-22939809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-373
               

               Cow position:
               chr21:11779353-11779497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               222-378
               

               Cow position:
               chr21:8213091-8213245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               148, 93
               

               Conread position:
               222-388
               

               Cow position:
               chr21:36763251-36763085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-390
               

               Cow position:
               chr21:42463504-42463667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               29, 89
               

               Conread position:
               222-397
               

               Cow position:
               chr21:43259409-43259236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               222-403
               

               Cow position:
               chr21:27521150-27521323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               222-405
               

               Cow position:
               chr21:6051693-6051513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr21:6998138-6997946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               7, 157
               

               Conread position:
               222-406
               

               Cow position:
               chr21:19259007-19258830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr21:957860-957677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               156, 40
               

               Conread position:
               222-407
               

               Cow position:
               chr21:6713333-6713521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr21:8430910-8431097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               222-407
               

               Cow position:
               chr21:9990700-9990515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               152, 141
               

               Conread position:
               222-407
               

               Cow position:
               chr21:14760755-14760577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               161, 108
               

               Conread position:
               222-407
               

               Cow position:
               chr21:15976822-15976638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               160, 62
               

               Conread position:
               222-407
               

               Cow position:
               chr21:16152631-16152441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               222-407
               

               Cow position:
               chr21:26647826-26648006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               150, 34
               

               Conread position:
               222-407
               

               Cow position:
               chr21:27863324-27863511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               150, 34
               

               Conread position:
               222-407
               

               Cow position:
               chr21:28733723-28733909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               152, 111
               

               Conread position:
               222-407
               

               Cow position:
               chr21:28989802-28989613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               222-407
               

               Cow position:
               chr21:30980388-30980573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               152, 87
               

               Conread position:
               222-407
               

               Cow position:
               chr21:32339550-32339732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               151
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr21:37299652-37299463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               148, 175
               

               Conread position:
               222-407
               

               Cow position:
               chr21:41918052-41918241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               222-407
               

               Cow position:
               chr21:46132765-46132580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               12, 149
               

               Conread position:
               222-457
               

               Cow position:
               chr21:17642796-17643030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               202, 31
               

               Conread position:
               223-343
               

               Cow position:
               chr21:42017414-42017534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-369
               

               Cow position:
               chr21:30938477-30938629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-374
               

               Cow position:
               chr21:2536950-2537101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-381
               

               Cow position:
               chr21:40475687-40475530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               223-391
               

               Cow position:
               chr21:49699851-49700016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               223-400
               

               Cow position:
               chr21:6624345-6624170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               223-400
               

               Cow position:
               chr21:27341406-27341581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               150, 89
               

               Conread position:
               223-401
               

               Cow position:
               chr21:868736-868915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               147, 12
               

               Conread position:
               223-406
               

               Cow position:
               chr21:44565533-44565714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               149, 83
               

               Conread position:
               223-407
               

               Cow position:
               chr21:33908-33726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr21:8545834-8546013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr21:10264221-10264037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               153, 38
               

               Conread position:
               223-407
               

               Cow position:
               chr21:11360215-11360042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr21:12461778-12461965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 12
               

               Conread position:
               223-407
               

               Cow position:
               chr21:15584230-15584415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr21:20160865-20160683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               149
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr21:22210060-22210239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr21:23321889-23322073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               154, 147
               

               Conread position:
               223-407
               

               Cow position:
               chr21:23979993-23980175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr21:38449260-38449442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               151, 86
               

               Conread position:
               223-407
               

               Cow position:
               chr21:41598000-41597826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr21:44724184-44724360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               223-441
               

               Cow position:
               chr21:34151772-34151556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               10, 34
               

               Conread position:
               224-345
               

               Cow position:
               chr21:26828786-26828904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               224-380
               

               Cow position:
               chr21:10151993-10151836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               224-397
               

               Cow position:
               chr21:38900960-38900791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               224-402
               

               Cow position:
               chr21:7584038-7583856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 46
               

               Conread position:
               224-406
               

               Cow position:
               chr21:17184105-17183929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr21:10114147-10114328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               146, 35
               

               Conread position:
               225-403
               

               Cow position:
               chr21:24858502-24858322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               225-407
               

               Cow position:
               chr21:7169875-7169691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               135, 168
               

               Conread position:
               227-407
               

               Cow position:
               chr21:10001260-10001080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               78, 86
               

               Conread position:
               228-407
               

               Cow position:
               chr21:42209445-42209626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               231-331
               

               Cow position:
               chr21:27744205-27744106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               231-351
               

               Cow position:
               chr21:41051069-41050950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               231-353
               

               Cow position:
               chr21:5405997-5405875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-359
               

               Cow position:
               chr21:8686962-8687090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-370
               

               Cow position:
               chr21:40291567-40291704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr21:713124-712982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               231-377
               

               Cow position:
               chr21:21968992-21968846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-379
               

               Cow position:
               chr21:20318691-20318547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-391
               

               Cow position:
               chr21:37837885-37838041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-399
               

               Cow position:
               chr21:19868774-19868944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               143, 132
               

               Conread position:
               231-404
               

               Cow position:
               chr21:44251662-44251835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr21:40168445-40168620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-406
               

               Cow position:
               chr21:28244651-28244475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               143, 102
               

               Conread position:
               231-406
               

               Cow position:
               chr21:40589301-40589479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr21:641768-641591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               143, 163
               

               Conread position:
               231-407
               

               Cow position:
               chr21:643505-643329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               143, 132
               

               Conread position:
               231-407
               

               Cow position:
               chr21:976960-977138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 150
               

               Conread position:
               231-407
               

               Cow position:
               chr21:1059257-1059083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               6, 82
               

               Conread position:
               231-407
               

               Cow position:
               chr21:3400651-3400829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               121, 75
               

               Conread position:
               231-407
               

               Cow position:
               chr21:7581724-7581897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr21:7768619-7768439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr21:8349509-8349333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               136, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr21:9416430-9416253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               76, 16
               

               Conread position:
               231-407
               

               Cow position:
               chr21:10410403-10410225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr21:20153135-20152959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               231-407
               

               Cow position:
               chr21:28030469-28030293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               143, 80
               

               Conread position:
               231-407
               

               Cow position:
               chr21:29069145-29069324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               80, 165
               

               Conread position:
               231-407
               

               Cow position:
               chr21:30835544-30835368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               140, 101
               

               Conread position:
               231-407
               

               Cow position:
               chr21:41287612-41287790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr21:42135435-42135615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr21:47713829-47714000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               143, 27
               

               Conread position:
               231-412
               

               Cow position:
               chr21:30231518-30231696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               143, 39
               

               Conread position:
               231-426
               

               Cow position:
               chr21:23568409-23568206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               231-447
               

               Cow position:
               chr21:18064737-18064947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               232-386
               

               Cow position:
               chr21:9334668-9334513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               232-389
               

               Cow position:
               chr21:42145002-42144850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               232-402
               

               Cow position:
               chr21:42007282-42007453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               138, 107
               

               Conread position:
               232-405
               

               Cow position:
               chr21:45970994-45971164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               232-406
               

               Cow position:
               chr21:21169316-21169486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               232-406
               

               Cow position:
               chr21:33413908-33414080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               142, 107
               

               Conread position:
               232-407
               

               Cow position:
               chr21:21077780-21077613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               232-407
               

               Cow position:
               chr21:28919348-28919519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               232-407
               

               Cow position:
               chr21:40266301-40266129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               232-408
               

               Cow position:
               chr21:25764815-25764638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               140, 53
               

               Conread position:
               232-420
               

               Cow position:
               chr21:41827978-41828174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               232-441
               

               Cow position:
               chr21:10004706-10004915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               142, 72
               

               Conread position:
               233-369
               

               Cow position:
               chr21:25383205-25383067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               233-372
               

               Cow position:
               chr21:38440438-38440299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               233-376
               

               Cow position:
               chr21:24797833-24797693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr21:13588938-13588767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               233-407
               

               Cow position:
               chr21:41621304-41621129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               37, 41
               

               Conread position:
               234-391
               

               Cow position:
               chr21:39319232-39319389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               234-407
               

               Cow position:
               chr21:6758521-6758352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr21:6834227-6834055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               235-399
               

               Cow position:
               chr21:6388176-6388015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr21:15544052-15544213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr21:18779799-18779966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr21:31159574-31159408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr21:45329773-45329940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               129, 96
               

               Conread position:
               235-407
               

               Cow position:
               chr21:45356010-45355841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               235-409
               

               Cow position:
               chr21:40769470-40769293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               236-390
               

               Cow position:
               chr21:37706239-37706391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               236-405
               

               Cow position:
               chr21:38720425-38720259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               236-406
               

               Cow position:
               chr21:471850-471683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               236-451
               

               Cow position:
               chr21:7377750-7377960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               14, 21
               

               Conread position:
               237-390
               

               Cow position:
               chr21:34482941-34483084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 76
               

               Conread position:
               237-407
               

               Cow position:
               chr21:18289833-18289668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               237-407
               

               Cow position:
               chr21:42413922-42414096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               238-347
               

               Cow position:
               chr21:27406070-27406179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               238-352
               

               Cow position:
               chr21:19927093-19927204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               110, 49
               

               Conread position:
               238-353
               

               Cow position:
               chr21:38267888-38268003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               238-390
               

               Cow position:
               chr21:7823538-7823382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 54
               

               Conread position:
               238-407
               

               Cow position:
               chr21:8235388-8235549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               239-371
               

               Cow position:
               chr21:8231505-8231636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               242-383
               

               Cow position:
               chr21:20213607-20213748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               242-383
               

               Cow position:
               chr21:31253703-31253566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               242-406
               

               Cow position:
               chr21:1511459-1511297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               132, 70
               

               Conread position:
               242-407
               

               Cow position:
               chr21:47363564-47363733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               242-441
               

               Cow position:
               chr21:3763573-3763767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               175, 44
               

               Conread position:
               243-367
               

               Cow position:
               chr21:35647659-35647783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-370
               

               Cow position:
               chr21:7221171-7221298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-406
               

               Cow position:
               chr21:42022444-42022284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr21:13036737-13036895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr21:15911569-15911405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               130, 68
               

               Conread position:
               243-407
               

               Cow position:
               chr21:21907265-21907424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               131, 69
               

               Conread position:
               243-407
               

               Cow position:
               chr21:39888569-39888743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 139
               

               Conread position:
               244-407
               

               Cow position:
               chr21:13584893-13585049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr21:30606918-30607084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               245-382
               

               Cow position:
               chr21:12207635-12207771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               246-407
               

               Cow position:
               chr21:36789962-36789796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               246-416
               

               Cow position:
               chr21:23460299-23460137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               247-406
               

               Cow position:
               chr21:1764704-1764858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               247-407
               

               Cow position:
               chr21:45915554-45915705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               251-407
               

               Cow position:
               chr21:20418521-20418679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               123, 144
               

               Conread position:
               251-457
               

               Cow position:
               chr21:5567147-5566931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               129, 63
               

               Conread position:
               254-407
               

               Cow position:
               chr21:41878627-41878476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               128, 32
               

               Conread position:
               257-407
               

               Cow position:
               chr21:9940033-9940185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               258-407
               

               Cow position:
               chr21:33997073-33997224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               260-407
               

               Cow position:
               chr21:29405069-29405210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr21:1591705-1591557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               262-407
               

               Cow position:
               chr21:16187657-16187804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               263-405
               

               Cow position:
               chr21:40432594-40432456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               263-407
               

               Cow position:
               chr21:34390826-34390970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               111, 116
               

               Conread position:
               264-405
               

               Cow position:
               chr21:43357108-43357252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               110, 68
               

               Conread position:
               291-406
               

               Cow position:
               chr21:10727398-10727283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               75-348
               

               Cow position:
               chr22:16633131-16632850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               95, 6
               

               Conread position:
               79-406
               

               Cow position:
               chr22:17814489-17814165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 71
               

               Conread position:
               83-344
               

               Cow position:
               chr22:3252711-3252964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               198, 22
               

               Conread position:
               84-330
               

               Cow position:
               chr22:32642940-32642696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               101, 95
               

               Conread position:
               85-401
               

               Cow position:
               chr22:26970026-26969727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               86-406
               

               Cow position:
               chr22:34606844-34606523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               120, 7
               

               Conread position:
               88-194
               

               Cow position:
               chr22:16621404-16621296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               88-343
               

               Cow position:
               chr22:3957147-3956891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               43, 83
               

               Conread position:
               88-381
               

               Cow position:
               chr22:8840850-8840569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               88-407
               

               Cow position:
               chr22:17294683-17294995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               89-406
               

               Cow position:
               chr22:22155847-22155543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               18, 41
               

               Conread position:
               89-407
               

               Cow position:
               chr22:7852196-7851903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               285, 15
               

               Conread position:
               89-407
               

               Cow position:
               chr22:28665541-28665224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               54, 92
               

               Conread position:
               94-225
               

               Cow position:
               chr22:6326732-6326601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 84
               

               Conread position:
               94-350
               

               Cow position:
               chr22:23397738-23397981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               15, 85
               

               Conread position:
               94-399
               

               Cow position:
               chr22:26706567-26706862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               203, 84
               

               Conread position:
               94-407
               

               Cow position:
               chr22:27835774-27835470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               168, 77
               

               Conread position:
               95-218
               

               Cow position:
               chr22:30861640-30861765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 71
               

               Conread position:
               95-302
               

               Cow position:
               chr22:26567708-26567499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               84, 15
               

               Conread position:
               95-347
               

               Cow position:
               chr22:3998001-3997751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               101, 83
               

               Conread position:
               96-406
               

               Cow position:
               chr22:27328650-27328953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               97-379
               

               Cow position:
               chr22:21235196-21235464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               109, 9
               

               Conread position:
               97-385
               

               Cow position:
               chr22:24031984-24032254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               98-331
               

               Cow position:
               chr22:2516674-2516893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               101-221
               

               Cow position:
               chr22:1602523-1602402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               85, 77
               

               Conread position:
               101-296
               

               Cow position:
               chr22:26669409-26669206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               95, 57
               

               Conread position:
               101-397
               

               Cow position:
               chr22:23176199-23176493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 102
               

               Conread position:
               101-406
               

               Cow position:
               chr22:8302329-8302607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               273, 65
               

               Conread position:
               101-407
               

               Cow position:
               chr22:13841370-13841075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 77
               

               Conread position:
               101-407
               

               Cow position:
               chr22:16823314-16823041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               199, 77
               

               Conread position:
               101-407
               

               Cow position:
               chr22:32188605-32188916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               64, 38
               

               Conread position:
               103-365
               

               Cow position:
               chr22:10324104-10323860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 66
               

               Conread position:
               104-221
               

               Cow position:
               chr22:32895500-32895386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               106-385
               

               Cow position:
               chr22:17349193-17349479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 53
               

               Conread position:
               106-406
               

               Cow position:
               chr22:3965429-3965125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 72
               

               Conread position:
               107-400
               

               Cow position:
               chr22:37324765-37324488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 68
               

               Conread position:
               107-407
               

               Cow position:
               chr22:10533818-10533531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 72
               

               Conread position:
               109-331
               

               Cow position:
               chr22:31309104-31308898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               111-371
               

               Cow position:
               chr22:1977967-1977723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               116-434
               

               Cow position:
               chr22:11986698-11986988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               217, 18
               

               Conread position:
               117-399
               

               Cow position:
               chr22:14140200-14139931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               255, 18
               

               Conread position:
               118-330
               

               Cow position:
               chr22:26107340-26107135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               123-407
               

               Cow position:
               chr22:21530155-21530416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               189, 56
               

               Conread position:
               125-341
               

               Cow position:
               chr22:27511411-27511631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               148, 78
               

               Conread position:
               126-407
               

               Cow position:
               chr22:35753112-35753365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               140-407
               

               Cow position:
               chr22:8115881-8116150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               146-324
               

               Cow position:
               chr22:18218719-18218893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               155-385
               

               Cow position:
               chr22:27508843-27508617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               216, 76
               

               Conread position:
               162-407
               

               Cow position:
               chr22:40120693-40120941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               11, 121
               

               Conread position:
               163-406
               

               Cow position:
               chr22:18940912-18941152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               166-372
               

               Cow position:
               chr22:6326626-6326417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               167-448
               

               Cow position:
               chr22:32895400-32895115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 166
               

               Conread position:
               168-407
               

               Cow position:
               chr22:31154136-31153893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               169-407
               

               Cow position:
               chr22:23855147-23854912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               170-407
               

               Cow position:
               chr22:3950427-3950190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 19
               

               Conread position:
               171-360
               

               Cow position:
               chr22:21484115-21483933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               171-407
               

               Cow position:
               chr22:1911836-1911607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               172-407
               

               Cow position:
               chr22:43119554-43119790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               24, 8
               

               Conread position:
               174-404
               

               Cow position:
               chr22:4119391-4119623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               176-390
               

               Cow position:
               chr22:14690805-14691016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               177-406
               

               Cow position:
               chr22:34750845-34750615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               20, 116
               

               Conread position:
               179-373
               

               Cow position:
               chr22:24802539-24802728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               179-407
               

               Cow position:
               chr22:26123068-26122835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               41, 197
               

               Conread position:
               185-406
               

               Cow position:
               chr22:9521302-9521079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               116, 23
               

               Conread position:
               187-432
               

               Cow position:
               chr22:14647237-14647002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               191-331
               

               Cow position:
               chr22:31064558-31064417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               6, 110
               

               Conread position:
               192-343
               

               Cow position:
               chr22:6793720-6793872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               60, 43
               

               Conread position:
               192-370
               

               Cow position:
               chr22:20847009-20846829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               193-441
               

               Cow position:
               chr22:14924580-14924827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               194-407
               

               Cow position:
               chr22:13878331-13878122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               13, 119
               

               Conread position:
               194-407
               

               Cow position:
               chr22:16044268-16044481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               182, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr22:27047267-27047466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               195-353
               

               Cow position:
               chr22:22606373-22606217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-369
               

               Cow position:
               chr22:10752390-10752566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-407
               

               Cow position:
               chr22:28704335-28704122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               196-351
               

               Cow position:
               chr22:26490657-26490496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               197-344
               

               Cow position:
               chr22:21215862-21215714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               198-407
               

               Cow position:
               chr22:44180740-44180529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               199-407
               

               Cow position:
               chr22:24610945-24611156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               20, 83
               

               Conread position:
               199-407
               

               Cow position:
               chr22:34726808-34726612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               7, 30
               

               Conread position:
               205-370
               

               Cow position:
               chr22:16845264-16845429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-376
               

               Cow position:
               chr22:7074518-7074354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr22:4535189-4535385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 50
               

               Conread position:
               205-407
               

               Cow position:
               chr22:26339891-26339692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               206-407
               

               Cow position:
               chr22:30515399-30515190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               207-371
               

               Cow position:
               chr22:28120862-28120694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               207-382
               

               Cow position:
               chr22:6494300-6494125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               207-407
               

               Cow position:
               chr22:16621319-16621114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 169
               

               Conread position:
               207-407
               

               Cow position:
               chr22:37029472-37029667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               163, 23
               

               Conread position:
               208-340
               

               Cow position:
               chr22:35533099-35533227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               208-384
               

               Cow position:
               chr22:44384366-44384533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               208-407
               

               Cow position:
               chr22:16251435-16251627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 105
               

               Conread position:
               211-406
               

               Cow position:
               chr22:24223203-24223012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               212-376
               

               Cow position:
               chr22:14381791-14381627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               162, 9
               

               Conread position:
               212-407
               

               Cow position:
               chr22:534632-534438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               212-407
               

               Cow position:
               chr22:21295591-21295788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 98
               

               Conread position:
               213-407
               

               Cow position:
               chr22:9372653-9372458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               36, 44
               

               Conread position:
               213-407
               

               Cow position:
               chr22:10421165-10420968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               214-341
               

               Cow position:
               chr22:1991730-1991603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 41
               

               Conread position:
               214-407
               

               Cow position:
               chr22:23758879-23759075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               215-403
               

               Cow position:
               chr22:4563493-4563303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               93, 180
               

               Conread position:
               215-406
               

               Cow position:
               chr22:1858461-1858272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               216-404
               

               Cow position:
               chr22:37947853-37947664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               7, 44
               

               Conread position:
               216-406
               

               Cow position:
               chr22:15737364-15737171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr22:12315940-12315750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               7, 74
               

               Conread position:
               216-407
               

               Cow position:
               chr22:34712853-34712662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               157, 12
               

               Conread position:
               217-381
               

               Cow position:
               chr22:948018-948178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               217-396
               

               Cow position:
               chr22:24175769-24175940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               217-399
               

               Cow position:
               chr22:2100817-2101001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               7, 178
               

               Conread position:
               217-407
               

               Cow position:
               chr22:877644-877452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               217-407
               

               Cow position:
               chr22:14142992-14143174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               7, 53
               

               Conread position:
               218-379
               

               Cow position:
               chr22:40869958-40869799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               218-407
               

               Cow position:
               chr22:21568120-21567935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               5, 53
               

               Conread position:
               219-401
               

               Cow position:
               chr22:45505880-45506062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               111, 6
               

               Conread position:
               219-407
               

               Cow position:
               chr22:15024983-15025171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               8, 153
               

               Conread position:
               219-407
               

               Cow position:
               chr22:36432847-36433035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               220-372
               

               Cow position:
               chr22:876400-876249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               220-406
               

               Cow position:
               chr22:31599556-31599376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               154, 68
               

               Conread position:
               220-407
               

               Cow position:
               chr22:12892236-12892432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               221-343
               

               Cow position:
               chr22:12777253-12777375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               221-406
               

               Cow position:
               chr22:12749779-12749965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               152, 10
               

               Conread position:
               221-406
               

               Cow position:
               chr22:12967944-12968130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               221-406
               

               Cow position:
               chr22:36539528-36539725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 37
               

               Conread position:
               221-407
               

               Cow position:
               chr22:10295159-10294975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               146, 72
               

               Conread position:
               221-407
               

               Cow position:
               chr22:12678298-12678482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               151
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr22:14006301-14006120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               221-416
               

               Cow position:
               chr22:2075890-2076081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               161, 11
               

               Conread position:
               222-348
               

               Cow position:
               chr22:2704421-2704295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-370
               

               Cow position:
               chr22:2644051-2643905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               222-373
               

               Cow position:
               chr22:11352328-11352480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               222-378
               

               Cow position:
               chr22:17129134-17128977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-379
               

               Cow position:
               chr22:7361856-7362011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               222-380
               

               Cow position:
               chr22:12902732-12902881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               222-383
               

               Cow position:
               chr22:25540122-25539961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-387
               

               Cow position:
               chr22:23372743-23372908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               152, 13
               

               Conread position:
               222-404
               

               Cow position:
               chr22:19173825-19173635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr22:530455-530628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr22:3301216-3301401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               222-406
               

               Cow position:
               chr22:4075761-4075950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr22:1349956-1349761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 151
               

               Conread position:
               222-407
               

               Cow position:
               chr22:2502949-2502765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               151
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               35, 105
               

               Conread position:
               222-407
               

               Cow position:
               chr22:8883134-8882953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr22:9597457-9597642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               115, 90
               

               Conread position:
               222-407
               

               Cow position:
               chr22:10609479-10609292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               146, 54
               

               Conread position:
               222-407
               

               Cow position:
               chr22:11130993-11130806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               154
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr22:13957521-13957709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr22:14178704-14178887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr22:15490777-15490593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               111, 156
               

               Conread position:
               222-407
               

               Cow position:
               chr22:21304118-21304305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               22, 34
               

               Conread position:
               222-407
               

               Cow position:
               chr22:21355017-21355200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 150
               

               Conread position:
               222-407
               

               Cow position:
               chr22:23750774-23750955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr22:23857170-23856986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               14, 150
               

               Conread position:
               222-407
               

               Cow position:
               chr22:29185485-29185670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               153, 92
               

               Conread position:
               222-407
               

               Cow position:
               chr22:38981009-38980835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               116, 32
               

               Conread position:
               222-408
               

               Cow position:
               chr22:10286093-10285905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               154
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               223-346
               

               Cow position:
               chr22:23630230-23630352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-353
               

               Cow position:
               chr22:9279146-9279019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               223-353
               

               Cow position:
               chr22:16346518-16346388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-371
               

               Cow position:
               chr22:1714743-1714891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               51, 45
               

               Conread position:
               223-371
               

               Cow position:
               chr22:28937815-28937958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               223-372
               

               Cow position:
               chr22:4156695-4156844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-372
               

               Cow position:
               chr22:16806711-16806568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               223-376
               

               Cow position:
               chr22:18967039-18967190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               151, 108
               

               Conread position:
               223-382
               

               Cow position:
               chr22:4164100-4163942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               223-382
               

               Cow position:
               chr22:35215670-35215513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-383
               

               Cow position:
               chr22:6754144-6754304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               69, 150
               

               Conread position:
               223-383
               

               Cow position:
               chr22:14372292-14372140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               151, 103
               

               Conread position:
               223-390
               

               Cow position:
               chr22:12573326-12573169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               223-401
               

               Cow position:
               chr22:32698882-32698707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               158, 89
               

               Conread position:
               223-401
               

               Cow position:
               chr22:47555970-47555795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               223-402
               

               Cow position:
               chr22:17652557-17652376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               147, 172
               

               Conread position:
               223-405
               

               Cow position:
               chr22:40387276-40387095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               28, 153
               

               Conread position:
               223-407
               

               Cow position:
               chr22:1026012-1025825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr22:10919733-10919915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               151, 48
               

               Conread position:
               223-407
               

               Cow position:
               chr22:12829489-12829673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               106, 51
               

               Conread position:
               223-407
               

               Cow position:
               chr22:23403520-23403710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 176
               

               Conread position:
               223-407
               

               Cow position:
               chr22:24915959-24915775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               131, 153
               

               Conread position:
               223-407
               

               Cow position:
               chr22:27275584-27275401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr22:27577864-27577680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               223-407
               

               Cow position:
               chr22:29389901-29389712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               223-408
               

               Cow position:
               chr22:25221778-25221962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               158, 36
               

               Conread position:
               223-441
               

               Cow position:
               chr22:18926478-18926259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-447
               

               Cow position:
               chr22:38550076-38549854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               224-364
               

               Cow position:
               chr22:2876677-2876817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-405
               

               Cow position:
               chr22:13719911-13720083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               158, 88
               

               Conread position:
               224-406
               

               Cow position:
               chr22:35029389-35029204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               148, 63
               

               Conread position:
               224-407
               

               Cow position:
               chr22:10303137-10302954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr22:10553564-10553747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               154
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr22:30049445-30049630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               157, 147
               

               Conread position:
               224-407
               

               Cow position:
               chr22:34618919-34618734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr22:37201969-37201792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               225-376
               

               Cow position:
               chr22:26421811-26421952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               225-383
               

               Cow position:
               chr22:24628538-24628695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               156, 86
               

               Conread position:
               226-345
               

               Cow position:
               chr22:2409013-2409132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               24, 31
               

               Conread position:
               226-383
               

               Cow position:
               chr22:7832236-7832392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr22:6149272-6149450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 31
               

               Conread position:
               226-407
               

               Cow position:
               chr22:34475879-34476064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               228-407
               

               Cow position:
               chr22:4990054-4990230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               154, 26
               

               Conread position:
               229-407
               

               Cow position:
               chr22:19047700-19047880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               145, 79
               

               Conread position:
               230-345
               

               Cow position:
               chr22:12599486-12599371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-338
               

               Cow position:
               chr22:45771910-45772017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-343
               

               Cow position:
               chr22:12914728-12914616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-345
               

               Cow position:
               chr22:1830162-1830049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               231-352
               

               Cow position:
               chr22:8331112-8330991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-361
               

               Cow position:
               chr22:3486664-3486788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-367
               

               Cow position:
               chr22:14676799-14676663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-371
               

               Cow position:
               chr22:41854021-41853879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               231-377
               

               Cow position:
               chr22:6096903-6097048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-379
               

               Cow position:
               chr22:30643020-30643167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-380
               

               Cow position:
               chr22:23398290-23398440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               231-381
               

               Cow position:
               chr22:26417397-26417247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-387
               

               Cow position:
               chr22:10532614-10532459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               231-392
               

               Cow position:
               chr22:1106181-1106019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-396
               

               Cow position:
               chr22:23675854-23676017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               141, 79
               

               Conread position:
               231-403
               

               Cow position:
               chr22:4017587-4017419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               149, 78
               

               Conread position:
               231-405
               

               Cow position:
               chr22:11697081-11697256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               83, 72
               

               Conread position:
               231-405
               

               Cow position:
               chr22:22860798-22860969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr22:29642223-29642053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               231-406
               

               Cow position:
               chr22:23806427-23806607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr22:590452-590275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               147, 9
               

               Conread position:
               231-407
               

               Cow position:
               chr22:1265810-1265990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               231-407
               

               Cow position:
               chr22:2524077-2523900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr22:2627694-2627513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr22:3842731-3842556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               146, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr22:4583673-4583496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 11
               

               Conread position:
               231-407
               

               Cow position:
               chr22:5595697-5595872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               151, 78
               

               Conread position:
               231-407
               

               Cow position:
               chr22:10122493-10122315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               135, 164
               

               Conread position:
               231-407
               

               Cow position:
               chr22:10339005-10339179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               142, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr22:15668362-15668534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               134, 80
               

               Conread position:
               231-407
               

               Cow position:
               chr22:18933600-18933784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr22:20626952-20626777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               43, 141
               

               Conread position:
               231-407
               

               Cow position:
               chr22:23735901-23736075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr22:25690161-25690343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               231-407
               

               Cow position:
               chr22:25742835-25743013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               136, 156
               

               Conread position:
               231-407
               

               Cow position:
               chr22:30484029-30483855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr22:33399374-33399546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               12, 125
               

               Conread position:
               231-407
               

               Cow position:
               chr22:43237294-43237469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-408
               

               Cow position:
               chr22:43131444-43131622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               232-372
               

               Cow position:
               chr22:47562818-47562676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               232-376
               

               Cow position:
               chr22:17198251-17198107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-377
               

               Cow position:
               chr22:16724574-16724718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               232-382
               

               Cow position:
               chr22:34616419-34616269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-386
               

               Cow position:
               chr22:3945480-3945337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               232-386
               

               Cow position:
               chr22:23265539-23265692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               232-386
               

               Cow position:
               chr22:24134213-24134366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               141, 80
               

               Conread position:
               232-400
               

               Cow position:
               chr22:10633027-10632859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               142, 100
               

               Conread position:
               232-406
               

               Cow position:
               chr22:23121889-23122069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               233-397
               

               Cow position:
               chr22:21012496-21012332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               143, 56
               

               Conread position:
               233-404
               

               Cow position:
               chr22:8539989-8539829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr22:1309622-1309790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr22:8287295-8287129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr22:12389211-12389035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr22:16541540-16541714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               141, 160
               

               Conread position:
               233-407
               

               Cow position:
               chr22:22013862-22013688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               233-407
               

               Cow position:
               chr22:45846253-45846084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               141, 20
               

               Conread position:
               233-441
               

               Cow position:
               chr22:8412639-8412433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               107, 10
               

               Conread position:
               234-400
               

               Cow position:
               chr22:2912479-2912639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               234-406
               

               Cow position:
               chr22:13286559-13286390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               140, 92
               

               Conread position:
               234-407
               

               Cow position:
               chr22:13222228-13222050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr22:23180934-23181102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr22:26184050-26184224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               140, 105
               

               Conread position:
               235-376
               

               Cow position:
               chr22:11344618-11344479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               235-384
               

               Cow position:
               chr22:27828488-27828339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-387
               

               Cow position:
               chr22:4310263-4310413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               29, 103
               

               Conread position:
               235-403
               

               Cow position:
               chr22:23249617-23249786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               78, 159
               

               Conread position:
               235-406
               

               Cow position:
               chr22:1588403-1588232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               138, 9
               

               Conread position:
               235-406
               

               Cow position:
               chr22:7165073-7164903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               66, 137
               

               Conread position:
               235-407
               

               Cow position:
               chr22:3987628-3987455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               235-407
               

               Cow position:
               chr22:28057940-28058114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr22:28672255-28672082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr22:41245364-41245183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               235-453
               

               Cow position:
               chr22:16533182-16532966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               174, 35
               

               Conread position:
               236-342
               

               Cow position:
               chr22:30687135-30687029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-400
               

               Cow position:
               chr22:25943584-25943420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-405
               

               Cow position:
               chr22:5384761-5384591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               136, 43
               

               Conread position:
               236-407
               

               Cow position:
               chr22:644661-644827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr22:6852475-6852645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr22:6936365-6936200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr22:8090423-8090590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               145, 76
               

               Conread position:
               236-407
               

               Cow position:
               chr22:13769586-13769408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr22:30269517-30269347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               137, 65
               

               Conread position:
               237-404
               

               Cow position:
               chr22:1659271-1659102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               137, 16
               

               Conread position:
               237-448
               

               Cow position:
               chr22:29954898-29955101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               136, 72
               

               Conread position:
               238-407
               

               Cow position:
               chr22:27740997-27740833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               238-407
               

               Cow position:
               chr22:44410828-44410662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               238-447
               

               Cow position:
               chr22:11458922-11458721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               172, 23
               

               Conread position:
               242-373
               

               Cow position:
               chr22:23430530-23430660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               242-381
               

               Cow position:
               chr22:12447559-12447420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               242-400
               

               Cow position:
               chr22:13734917-13735071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               131, 62
               

               Conread position:
               242-407
               

               Cow position:
               chr22:37139538-37139371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               6, 15
               

               Conread position:
               243-365
               

               Cow position:
               chr22:24542457-24542342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               243-372
               

               Cow position:
               chr22:29842602-29842731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-379
               

               Cow position:
               chr22:42050672-42050541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr22:6622147-6622306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr22:8733235-8733401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr22:17125684-17125522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 68
               

               Conread position:
               244-372
               

               Cow position:
               chr22:27944185-27944051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               244-383
               

               Cow position:
               chr22:12946081-12946211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               244-406
               

               Cow position:
               chr22:3325689-3325523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr22:14844661-14844506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               134, 12
               

               Conread position:
               244-411
               

               Cow position:
               chr22:6289402-6289562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               245-406
               

               Cow position:
               chr22:19775334-19775496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               128, 25
               

               Conread position:
               245-407
               

               Cow position:
               chr22:18293665-18293823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               250-407
               

               Cow position:
               chr22:29344972-29344815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               124, 7
               

               Conread position:
               252-405
               

               Cow position:
               chr22:3544230-3544077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 76
               

               Conread position:
               252-407
               

               Cow position:
               chr22:1975702-1975550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               127, 35
               

               Conread position:
               255-380
               

               Cow position:
               chr22:28728591-28728715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               117, 77
               

               Conread position:
               255-407
               

               Cow position:
               chr22:34398366-34398519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               259-405
               

               Cow position:
               chr22:43291816-43291956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               265-407
               

               Cow position:
               chr22:7153961-7153824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               266-407
               

               Cow position:
               chr22:13849374-13849512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               115, 46
               

               Conread position:
               266-419
               

               Cow position:
               chr22:30964207-30964055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               268-407
               

               Cow position:
               chr22:31592779-31592920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               107, 52
               

               Conread position:
               269-407
               

               Cow position:
               chr22:3241627-3241760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               271-407
               

               Cow position:
               chr22:5837342-5837206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               275-388
               

               Cow position:
               chr22:11453812-11453699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               52, 97
               

               Conread position:
               275-407
               

               Cow position:
               chr22:7838660-7838531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               81-407
               

               Cow position:
               chr23:18402040-18402345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 55
               

               Conread position:
               84-226
               

               Cow position:
               chr23:4578814-4578962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               86-227
               

               Cow position:
               chr23:15286931-15287078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               87-407
               

               Cow position:
               chr23:4967079-4966763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 91
               

               Conread position:
               89-345
               

               Cow position:
               chr23:31299459-31299181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               25, 267
               

               Conread position:
               89-349
               

               Cow position:
               chr23:20437346-20437594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               89-351
               

               Cow position:
               chr23:38467839-38468095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               230, 16
               

               Conread position:
               89-367
               

               Cow position:
               chr23:4241398-4241654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               12, 57
               

               Conread position:
               89-407
               

               Cow position:
               chr23:1397795-1398092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               92-407
               

               Cow position:
               chr23:20604475-20604776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               208, 76
               

               Conread position:
               94-293
               

               Cow position:
               chr23:5350554-5350747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               112, 42
               

               Conread position:
               94-297
               

               Cow position:
               chr23:3137571-3137361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               94-367
               

               Cow position:
               chr23:27790250-27790001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               94-368
               

               Cow position:
               chr23:37118466-37118727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               94-379
               

               Cow position:
               chr23:353347-353631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               85, 11
               

               Conread position:
               95-361
               

               Cow position:
               chr23:13511963-13511712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               211, 90
               

               Conread position:
               97-205
               

               Cow position:
               chr23:4336358-4336247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               97-406
               

               Cow position:
               chr23:11380024-11380308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               211, 34
               

               Conread position:
               97-407
               

               Cow position:
               chr23:21502399-21502696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               227, 8
               

               Conread position:
               99-411
               

               Cow position:
               chr23:4916925-4916624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               78, 6
               

               Conread position:
               100-368
               

               Cow position:
               chr23:12602231-12602490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               140, 78
               

               Conread position:
               100-405
               

               Cow position:
               chr23:14739715-14739389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 294
               

               Conread position:
               100-407
               

               Cow position:
               chr23:24479719-24480016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 67
               

               Conread position:
               101-244
               

               Cow position:
               chr23:19274300-19274156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               85, 77
               

               Conread position:
               101-289
               

               Cow position:
               chr23:18829249-18829438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               136, 77
               

               Conread position:
               105-331
               

               Cow position:
               chr23:1503813-1503591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               74, 51
               

               Conread position:
               105-383
               

               Cow position:
               chr23:20434816-20435096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 69
               

               Conread position:
               116-323
               

               Cow position:
               chr23:5386843-5387063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               140-371
               

               Cow position:
               chr23:21438696-21438473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               160, 38
               

               Conread position:
               147-364
               

               Cow position:
               chr23:18787094-18787297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               202, 37
               

               Conread position:
               152-407
               

               Cow position:
               chr23:19370872-19371127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               159-390
               

               Cow position:
               chr23:360497-360731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               47, 8
               

               Conread position:
               165-374
               

               Cow position:
               chr23:7596172-7596370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               165-406
               

               Cow position:
               chr23:1742546-1742301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               171-346
               

               Cow position:
               chr23:19273829-19273659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               171-377
               

               Cow position:
               chr23:5174723-5174522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               171-405
               

               Cow position:
               chr23:20388476-20388705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               203, 19
               

               Conread position:
               172-351
               

               Cow position:
               chr23:32546091-32546265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 7
               

               Conread position:
               174-332
               

               Cow position:
               chr23:1671208-1671050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 50
               

               Conread position:
               176-407
               

               Cow position:
               chr23:9652313-9652537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               178-403
               

               Cow position:
               chr23:38845769-38845553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               180-390
               

               Cow position:
               chr23:4336232-4336032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               185-346
               

               Cow position:
               chr23:5203769-5203927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               186-370
               

               Cow position:
               chr23:3835432-3835614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               187-400
               

               Cow position:
               chr23:12334372-12334158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               187, 19
               

               Conread position:
               187-401
               

               Cow position:
               chr23:39780918-39780704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               189-406
               

               Cow position:
               chr23:3244307-3244522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               192-441
               

               Cow position:
               chr23:21446273-21446030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               178, 38
               

               Conread position:
               194-376
               

               Cow position:
               chr23:3814125-3814307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               194-405
               

               Cow position:
               chr23:10876556-10876341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr23:13555285-13555494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 13
               

               Conread position:
               194-407
               

               Cow position:
               chr23:30951114-30950900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               14, 180
               

               Conread position:
               195-377
               

               Cow position:
               chr23:4104550-4104372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               195-402
               

               Cow position:
               chr23:4528722-4528931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               11, 42
               

               Conread position:
               196-317
               

               Cow position:
               chr23:38845995-38845875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               196-378
               

               Cow position:
               chr23:13673876-13674058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               10, 176
               

               Conread position:
               198-407
               

               Cow position:
               chr23:10553857-10554065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               50, 8
               

               Conread position:
               206-407
               

               Cow position:
               chr23:14164248-14164457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               207-407
               

               Cow position:
               chr23:38208868-38208669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               208-343
               

               Cow position:
               chr23:19179232-19179368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               208-400
               

               Cow position:
               chr23:39753257-39753067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               21, 47
               

               Conread position:
               208-401
               

               Cow position:
               chr23:40648588-40648784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               37, 51
               

               Conread position:
               210-343
               

               Cow position:
               chr23:22530296-22530431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               210-384
               

               Cow position:
               chr23:28529815-28529983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               162, 13
               

               Conread position:
               210-407
               

               Cow position:
               chr23:33153050-33153246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 30
               

               Conread position:
               214-406
               

               Cow position:
               chr23:20194789-20194972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 29
               

               Conread position:
               215-406
               

               Cow position:
               chr23:29106940-29107128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               216-346
               

               Cow position:
               chr23:38992956-38993086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               216-406
               

               Cow position:
               chr23:24704425-24704226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               217-349
               

               Cow position:
               chr23:1954416-1954281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               217-407
               

               Cow position:
               chr23:6994849-6995039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               217-407
               

               Cow position:
               chr23:22573776-22573973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               101, 8
               

               Conread position:
               221-331
               

               Cow position:
               chr23:18417222-18417112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               221-372
               

               Cow position:
               chr23:7709919-7709769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               222-346
               

               Cow position:
               chr23:36022660-36022780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               222-352
               

               Cow position:
               chr23:21423896-21423766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-356
               

               Cow position:
               chr23:12405692-12405825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               222-370
               

               Cow position:
               chr23:14569372-14569520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-372
               

               Cow position:
               chr23:22238693-22238843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-376
               

               Cow position:
               chr23:32479889-32480051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-378
               

               Cow position:
               chr23:30311796-30311958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               69, 20
               

               Conread position:
               222-383
               

               Cow position:
               chr23:1936513-1936675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               222-383
               

               Cow position:
               chr23:13470987-13471147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               222-389
               

               Cow position:
               chr23:25990309-25990476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               146, 80
               

               Conread position:
               222-390
               

               Cow position:
               chr23:18823118-18822949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               222-393
               

               Cow position:
               chr23:6768033-6767860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               152, 18
               

               Conread position:
               222-400
               

               Cow position:
               chr23:10416301-10416470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               150, 9
               

               Conread position:
               222-401
               

               Cow position:
               chr23:26632933-26632755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 55
               

               Conread position:
               222-405
               

               Cow position:
               chr23:35503904-35503729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               14, 102
               

               Conread position:
               222-405
               

               Cow position:
               chr23:40790101-40789922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               14, 60
               

               Conread position:
               222-406
               

               Cow position:
               chr23:20002382-20002199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               149, 13
               

               Conread position:
               222-406
               

               Cow position:
               chr23:41472750-41472563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               222-407
               

               Cow position:
               chr23:769412-769610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr23:1767959-1767773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               28, 151
               

               Conread position:
               222-407
               

               Cow position:
               chr23:3190996-3191183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               222-407
               

               Cow position:
               chr23:15743218-15743035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               152, 21
               

               Conread position:
               222-407
               

               Cow position:
               chr23:16780433-16780606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               222-407
               

               Cow position:
               chr23:18296936-18296752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               21, 121
               

               Conread position:
               222-407
               

               Cow position:
               chr23:25864568-25864750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               222-407
               

               Cow position:
               chr23:34356769-34356587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               128, 62
               

               Conread position:
               222-407
               

               Cow position:
               chr23:38455049-38455238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               154
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr23:39083579-39083393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               105, 32
               

               Conread position:
               222-408
               

               Cow position:
               chr23:13946166-13945981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               78, 86
               

               Conread position:
               223-332
               

               Cow position:
               chr23:26591784-26591892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               223-348
               

               Cow position:
               chr23:1798238-1798113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-362
               

               Cow position:
               chr23:5686494-5686633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-365
               

               Cow position:
               chr23:17597554-17597412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-367
               

               Cow position:
               chr23:18739336-18739481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               223-390
               

               Cow position:
               chr23:38155-37982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               223-402
               

               Cow position:
               chr23:24867435-24867254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               150, 12
               

               Conread position:
               223-407
               

               Cow position:
               chr23:1656022-1655838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr23:1701299-1701114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr23:11129360-11129174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               151, 33
               

               Conread position:
               223-407
               

               Cow position:
               chr23:11212635-11212449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               144, 172
               

               Conread position:
               223-407
               

               Cow position:
               chr23:16582782-16582965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               151, 169
               

               Conread position:
               223-407
               

               Cow position:
               chr23:26986144-26986329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               151, 73
               

               Conread position:
               224-339
               

               Cow position:
               chr23:3979635-3979751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               224-370
               

               Cow position:
               chr23:25938263-25938406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               224-372
               

               Cow position:
               chr23:4054343-4054196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               224-380
               

               Cow position:
               chr23:6158071-6158227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               70, 51
               

               Conread position:
               224-390
               

               Cow position:
               chr23:1759373-1759206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               150, 131
               

               Conread position:
               224-406
               

               Cow position:
               chr23:18404132-18403951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               153, 32
               

               Conread position:
               224-406
               

               Cow position:
               chr23:26283849-26283669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               150, 58
               

               Conread position:
               224-407
               

               Cow position:
               chr23:4968403-4968577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               225-407
               

               Cow position:
               chr23:5162555-5162371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               149, 87
               

               Conread position:
               225-407
               

               Cow position:
               chr23:6592582-6592756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               157, 81
               

               Conread position:
               225-409
               

               Cow position:
               chr23:4877486-4877298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               225-419
               

               Cow position:
               chr23:21309287-21309481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               155, 38
               

               Conread position:
               226-363
               

               Cow position:
               chr23:3105009-3104873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               226-403
               

               Cow position:
               chr23:13202234-13202414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               148, 49
               

               Conread position:
               227-407
               

               Cow position:
               chr23:24984045-24984224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               230-407
               

               Cow position:
               chr23:39775846-39775668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               116, 38
               

               Conread position:
               231-345
               

               Cow position:
               chr23:5514644-5514530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-359
               

               Cow position:
               chr23:24779423-24779551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-360
               

               Cow position:
               chr23:32621405-32621274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-369
               

               Cow position:
               chr23:57042-57182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               231-371
               

               Cow position:
               chr23:14895554-14895694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-377
               

               Cow position:
               chr23:5785964-5785818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-379
               

               Cow position:
               chr23:3234661-3234810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               231-380
               

               Cow position:
               chr23:4003766-4003615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               231-380
               

               Cow position:
               chr23:16447569-16447715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               231-382
               

               Cow position:
               chr23:18901935-18902084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               143, 81
               

               Conread position:
               231-382
               

               Cow position:
               chr23:24700963-24701112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 83
               

               Conread position:
               231-382
               

               Cow position:
               chr23:29458979-29459131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr23:29480005-29479851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               231-393
               

               Cow position:
               chr23:4972885-4972722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               148, 74
               

               Conread position:
               231-405
               

               Cow position:
               chr23:9734528-9734360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr23:11081375-11081200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               143, 68
               

               Conread position:
               231-405
               

               Cow position:
               chr23:39813619-39813448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               69, 82
               

               Conread position:
               231-406
               

               Cow position:
               chr23:19765473-19765300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               231-406
               

               Cow position:
               chr23:26949316-26949144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr23:33622030-33622208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr23:306642-306462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr23:307575-307395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr23:348828-349007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr23:1254807-1254631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               149, 140
               

               Conread position:
               231-407
               

               Cow position:
               chr23:1636387-1636223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               139, 54
               

               Conread position:
               231-407
               

               Cow position:
               chr23:5436523-5436701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr23:5881398-5881575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               158, 134
               

               Conread position:
               231-407
               

               Cow position:
               chr23:13599460-13599288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr23:16699922-16700095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr23:20557725-20557902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr23:22105680-22105504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               155, 69
               

               Conread position:
               231-407
               

               Cow position:
               chr23:22297919-22298093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               142, 75
               

               Conread position:
               231-407
               

               Cow position:
               chr23:35239470-35239291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               231-408
               

               Cow position:
               chr23:18697906-18698080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               143, 122
               

               Conread position:
               232-372
               

               Cow position:
               chr23:9874772-9874634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               232-378
               

               Cow position:
               chr23:4864550-4864405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               232-385
               

               Cow position:
               chr23:35930069-35929917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr23:1885054-1885228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr23:4726911-4726731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               232-407
               

               Cow position:
               chr23:6035549-6035379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               142, 42
               

               Conread position:
               232-407
               

               Cow position:
               chr23:6224092-6223926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr23:19774887-19774717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               53, 49
               

               Conread position:
               232-407
               

               Cow position:
               chr23:21452611-21452788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr23:25675579-25675756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               232-407
               

               Cow position:
               chr23:33601420-33601584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               140, 21
               

               Conread position:
               233-383
               

               Cow position:
               chr23:23409850-23409700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               141, 72
               

               Conread position:
               233-441
               

               Cow position:
               chr23:28944951-28945154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               235-369
               

               Cow position:
               chr23:35656523-35656394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               235-387
               

               Cow position:
               chr23:39793791-39793640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               77, 87
               

               Conread position:
               235-390
               

               Cow position:
               chr23:23904212-23904366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-402
               

               Cow position:
               chr23:17484731-17484890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               235-406
               

               Cow position:
               chr23:29345653-29345816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               235-406
               

               Cow position:
               chr23:41348508-41348683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr23:5603169-5603341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr23:26051154-26050979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr23:33711875-33711705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr23:35247483-35247309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               236-390
               

               Cow position:
               chr23:40781444-40781291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               238-390
               

               Cow position:
               chr23:30655701-30655851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               136, 74
               

               Conread position:
               242-406
               

               Cow position:
               chr23:11224964-11224801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               243-380
               

               Cow position:
               chr23:39573146-39573278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr23:4795277-4795116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               131, 62
               

               Conread position:
               243-407
               

               Cow position:
               chr23:14838637-14838797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               244-406
               

               Cow position:
               chr23:25668985-25669149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               53, 22
               

               Conread position:
               244-407
               

               Cow position:
               chr23:27544934-27544772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               246-407
               

               Cow position:
               chr23:37065954-37065786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr23:36309523-36309364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               126, 9
               

               Conread position:
               249-407
               

               Cow position:
               chr23:38973949-38973791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               129, 63
               

               Conread position:
               251-372
               

               Cow position:
               chr23:21384820-21384939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               252-402
               

               Cow position:
               chr23:33570233-33570085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               253-407
               

               Cow position:
               chr23:4562983-4562829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               254-408
               

               Cow position:
               chr23:3262401-3262553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               255-406
               

               Cow position:
               chr23:40443956-40443802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               117, 139
               

               Conread position:
               256-368
               

               Cow position:
               chr23:1803815-1803925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               256-405
               

               Cow position:
               chr23:32309780-32309630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 126
               

               Conread position:
               258-407
               

               Cow position:
               chr23:18238434-18238583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               124, 135
               

               Conread position:
               258-407
               

               Cow position:
               chr23:18322334-18322472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               262-407
               

               Cow position:
               chr23:1499400-1499544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 29
               

               Conread position:
               273-407
               

               Cow position:
               chr23:39520373-39520506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               100, 5
               

               Conread position:
               276-405
               

               Cow position:
               chr23:1921152-1921280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               315-407
               

               Cow position:
               chr23:1670938-1670845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               78-404
               

               Cow position:
               chr24:12889695-12890010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               192, 90
               

               Conread position:
               83-413
               

               Cow position:
               chr24:16118595-16118276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               88-183
               

               Cow position:
               chr24:34533326-34533232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               88-356
               

               Cow position:
               chr24:42380515-42380765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               89-280
               

               Cow position:
               chr24:7750983-7751176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 91
               

               Conread position:
               89-338
               

               Cow position:
               chr24:873671-873434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 90
               

               Conread position:
               94-204
               

               Cow position:
               chr24:19779156-19779266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               14, 85
               

               Conread position:
               94-331
               

               Cow position:
               chr24:256242-256019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               94-347
               

               Cow position:
               chr24:30203036-30202801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               94-402
               

               Cow position:
               chr24:5683492-5683199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               83, 96
               

               Conread position:
               95-296
               

               Cow position:
               chr24:40185338-40185152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               95-323
               

               Cow position:
               chr24:42430816-42430594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               95-381
               

               Cow position:
               chr24:14648143-14648416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               147, 59
               

               Conread position:
               96-390
               

               Cow position:
               chr24:11007689-11007392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               18, 132
               

               Conread position:
               96-407
               

               Cow position:
               chr24:14171459-14171776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               99-280
               

               Cow position:
               chr24:40256805-40256624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 80
               

               Conread position:
               99-407
               

               Cow position:
               chr24:15373606-15373324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               101-407
               

               Cow position:
               chr24:40850364-40850081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               102-318
               

               Cow position:
               chr24:1831360-1831560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               106-216
               

               Cow position:
               chr24:216925-216813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 72
               

               Conread position:
               107-406
               

               Cow position:
               chr24:40389814-40389525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               263, 27
               

               Conread position:
               110-353
               

               Cow position:
               chr24:14786583-14786350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               117-441
               

               Cow position:
               chr24:43364563-43364244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               118-232
               

               Cow position:
               chr24:16517691-16517806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 60
               

               Conread position:
               119-406
               

               Cow position:
               chr24:33465437-33465694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               122-310
               

               Cow position:
               chr24:645567-645373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 58
               

               Conread position:
               140-396
               

               Cow position:
               chr24:8006497-8006236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               34, 126
               

               Conread position:
               149-342
               

               Cow position:
               chr24:22235636-22235449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               155-407
               

               Cow position:
               chr24:32204617-32204877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               8, 206
               

               Conread position:
               164-407
               

               Cow position:
               chr24:27052342-27052577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               168-406
               

               Cow position:
               chr24:18970350-18970589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               52, 38
               

               Conread position:
               171-353
               

               Cow position:
               chr24:26848578-26848760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 177
               

               Conread position:
               179-407
               

               Cow position:
               chr24:32071102-32070884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               142, 9
               

               Conread position:
               184-406
               

               Cow position:
               chr24:29673656-29673439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               185-407
               

               Cow position:
               chr24:43683322-43683551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               187-408
               

               Cow position:
               chr24:28253858-28253620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               6, 25
               

               Conread position:
               188-407
               

               Cow position:
               chr24:18331851-18331639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               92, 28
               

               Conread position:
               188-407
               

               Cow position:
               chr24:18615139-18614916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               8, 83
               

               Conread position:
               193-368
               

               Cow position:
               chr24:34465377-34465550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               194-389
               

               Cow position:
               chr24:18313806-18314005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               120, 12
               

               Conread position:
               195-406
               

               Cow position:
               chr24:28289126-28289331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               196-310
               

               Cow position:
               chr24:10840793-10840906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               196-339
               

               Cow position:
               chr24:43024389-43024245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               196-348
               

               Cow position:
               chr24:19779232-19779376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               198-353
               

               Cow position:
               chr24:18333010-18333158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               200-384
               

               Cow position:
               chr24:40404689-40404866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               6, 31
               

               Conread position:
               205-387
               

               Cow position:
               chr24:32739155-32739326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               167, 55
               

               Conread position:
               205-391
               

               Cow position:
               chr24:34533241-34533050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               205-405
               

               Cow position:
               chr24:26732569-26732371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               205-405
               

               Cow position:
               chr24:40130248-40130046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr24:24457133-24457332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               206-352
               

               Cow position:
               chr24:37453385-37453532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               28, 87
               

               Conread position:
               206-400
               

               Cow position:
               chr24:28690802-28690609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr24:35150633-35150439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr24:41406012-41405814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               122, 169
               

               Conread position:
               207-370
               

               Cow position:
               chr24:42726567-42726404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-407
               

               Cow position:
               chr24:18741455-18741653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               158
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               207-420
               

               Cow position:
               chr24:6151903-6151698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               208-407
               

               Cow position:
               chr24:27284933-27284737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 105
               

               Conread position:
               208-407
               

               Cow position:
               chr24:37395098-37395292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               104, 35
               

               Conread position:
               210-407
               

               Cow position:
               chr24:27290988-27290786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               214-386
               

               Cow position:
               chr24:30313917-30314088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 9
               

               Conread position:
               214-407
               

               Cow position:
               chr24:34410754-34410559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               7, 75
               

               Conread position:
               215-335
               

               Cow position:
               chr24:25970968-25971086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 25
               

               Conread position:
               215-407
               

               Cow position:
               chr24:28721993-28721808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               34, 43
               

               Conread position:
               216-407
               

               Cow position:
               chr24:20943270-20943084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               217-365
               

               Cow position:
               chr24:41412189-41412335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 115
               

               Conread position:
               217-391
               

               Cow position:
               chr24:19637697-19637516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               7, 42
               

               Conread position:
               217-434
               

               Cow position:
               chr24:41565995-41566203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 6
               

               Conread position:
               221-346
               

               Cow position:
               chr24:18328372-18328494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               221-399
               

               Cow position:
               chr24:24490915-24491093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               165, 58
               

               Conread position:
               221-403
               

               Cow position:
               chr24:17434713-17434538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               222-339
               

               Cow position:
               chr24:32818200-32818315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               222-340
               

               Cow position:
               chr24:7113324-7113206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-341
               

               Cow position:
               chr24:27553196-27553078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               222-360
               

               Cow position:
               chr24:32890942-32891080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-364
               

               Cow position:
               chr24:18668680-18668538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 80
               

               Conread position:
               222-368
               

               Cow position:
               chr24:15347692-15347545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               222-378
               

               Cow position:
               chr24:20969563-20969716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               222-382
               

               Cow position:
               chr24:34896600-34896755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               222-386
               

               Cow position:
               chr24:28355592-28355747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr24:7777527-7777702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr24:15861492-15861683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr24:16645217-16645406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr24:17832719-17832896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr24:27713303-27713490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr24:28553464-28553635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr24:31159717-31159538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr24:35576438-35576616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr24:39523347-39523530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               222-429
               

               Cow position:
               chr24:13586890-13587096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               80, 35
               

               Conread position:
               223-353
               

               Cow position:
               chr24:5152624-5152494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-381
               

               Cow position:
               chr24:18750808-18750647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-400
               

               Cow position:
               chr24:21519528-21519358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 99
               

               Conread position:
               223-400
               

               Cow position:
               chr24:23556233-23556415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               223-404
               

               Cow position:
               chr24:18356951-18357135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               151, 173
               

               Conread position:
               223-406
               

               Cow position:
               chr24:27906539-27906356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr24:17955344-17955524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr24:19769596-19769405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr24:28063048-28062869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               161, 52
               

               Conread position:
               223-407
               

               Cow position:
               chr24:30483840-30484033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr24:34008472-34008659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr24:37974880-37975066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               142, 172
               

               Conread position:
               223-447
               

               Cow position:
               chr24:30229578-30229347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-449
               

               Cow position:
               chr24:27202189-27201965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               224-388
               

               Cow position:
               chr24:28470580-28470745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               224-390
               

               Cow position:
               chr24:29587098-29586931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 20
               

               Conread position:
               224-405
               

               Cow position:
               chr24:18810931-18810762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               149, 109
               

               Conread position:
               224-407
               

               Cow position:
               chr24:10300176-10299998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               150, 103
               

               Conread position:
               225-407
               

               Cow position:
               chr24:27040146-27039964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               149, 84
               

               Conread position:
               226-331
               

               Cow position:
               chr24:39218454-39218559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               226-381
               

               Cow position:
               chr24:29171059-29170905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               143, 70
               

               Conread position:
               226-406
               

               Cow position:
               chr24:11887255-11887076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               145, 86
               

               Conread position:
               226-407
               

               Cow position:
               chr24:34496222-34496035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               227-441
               

               Cow position:
               chr24:32194605-32194392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               146, 37
               

               Conread position:
               230-405
               

               Cow position:
               chr24:41980567-41980742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               142, 82
               

               Conread position:
               230-420
               

               Cow position:
               chr24:2992788-2992973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               231-365
               

               Cow position:
               chr24:19187030-19186901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               231-371
               

               Cow position:
               chr24:390196-390057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               231-377
               

               Cow position:
               chr24:22133264-22133117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               231-381
               

               Cow position:
               chr24:6742314-6742164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               231-387
               

               Cow position:
               chr24:43200183-43200333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               231-388
               

               Cow position:
               chr24:33098380-33098539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr24:8676916-8676755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               231-399
               

               Cow position:
               chr24:27824555-27824383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               87, 81
               

               Conread position:
               231-405
               

               Cow position:
               chr24:23000107-22999930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               21, 90
               

               Conread position:
               231-407
               

               Cow position:
               chr24:352514-352688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr24:6102920-6102742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               141, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr24:6912271-6912451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr24:10125977-10125789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr24:16089320-16089147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               130, 22
               

               Conread position:
               231-407
               

               Cow position:
               chr24:16510070-16509888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               112, 147
               

               Conread position:
               231-407
               

               Cow position:
               chr24:16895046-16895213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr24:17104477-17104655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr24:19535163-19535337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr24:25885066-25885244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               67, 83
               

               Conread position:
               231-407
               

               Cow position:
               chr24:29561480-29561659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               139, 165
               

               Conread position:
               231-407
               

               Cow position:
               chr24:33944494-33944320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr24:34390369-34390203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               132, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr24:34742846-34742669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               107, 141
               

               Conread position:
               231-407
               

               Cow position:
               chr24:39910941-39911120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr24:42825412-42825577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr24:44987282-44987461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               231-420
               

               Cow position:
               chr24:16268036-16268226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               148, 100
               

               Conread position:
               232-351
               

               Cow position:
               chr24:17689520-17689638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               232-368
               

               Cow position:
               chr24:27448737-27448600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               232-381
               

               Cow position:
               chr24:43832622-43832472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 125
               

               Conread position:
               232-407
               

               Cow position:
               chr24:38006624-38006789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 76
               

               Conread position:
               233-400
               

               Cow position:
               chr24:16994972-16994808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               233-404
               

               Cow position:
               chr24:27220000-27220168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr24:19800933-19800763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               233-407
               

               Cow position:
               chr24:22079551-22079379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               143, 67
               

               Conread position:
               233-440
               

               Cow position:
               chr24:7476262-7476467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               234-368
               

               Cow position:
               chr24:36303226-36303361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               234-386
               

               Cow position:
               chr24:20801256-20801408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               234-400
               

               Cow position:
               chr24:16895348-16895514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               136, 13
               

               Conread position:
               234-441
               

               Cow position:
               chr24:25194354-25194153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               235-357
               

               Cow position:
               chr24:32230417-32230541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               235-376
               

               Cow position:
               chr24:29389323-29389179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               235-387
               

               Cow position:
               chr24:814181-814325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               140, 18
               

               Conread position:
               235-406
               

               Cow position:
               chr24:27900816-27900646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               137, 43
               

               Conread position:
               235-406
               

               Cow position:
               chr24:34396090-34396256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr24:11840275-11840106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr24:24061715-24061892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               53, 70
               

               Conread position:
               235-407
               

               Cow position:
               chr24:27418015-27418184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               139, 52
               

               Conread position:
               235-407
               

               Cow position:
               chr24:28043064-28042889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               138, 161
               

               Conread position:
               236-407
               

               Cow position:
               chr24:32369827-32370001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               97, 138
               

               Conread position:
               236-407
               

               Cow position:
               chr24:38841334-38841492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               237-404
               

               Cow position:
               chr24:17860171-17860341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               237-407
               

               Cow position:
               chr24:44054081-44054245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               242-441
               

               Cow position:
               chr24:2095800-2096006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               99, 163
               

               Conread position:
               243-380
               

               Cow position:
               chr24:34556115-34555981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               243-406
               

               Cow position:
               chr24:17752032-17752195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               128, 11
               

               Conread position:
               243-407
               

               Cow position:
               chr24:7046669-7046831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               137
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr24:24755526-24755360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               119, 7
               

               Conread position:
               243-407
               

               Cow position:
               chr24:29595730-29595893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               160, 10
               

               Conread position:
               243-407
               

               Cow position:
               chr24:31324365-31324199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               131, 32
               

               Conread position:
               243-407
               

               Cow position:
               chr24:39905366-39905533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               43, 107
               

               Conread position:
               244-407
               

               Cow position:
               chr24:8886990-8886827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               89, 129
               

               Conread position:
               245-393
               

               Cow position:
               chr24:19261299-19261444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               247-355
               

               Cow position:
               chr24:22315533-22315425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               247-385
               

               Cow position:
               chr24:29538430-29538570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               250-398
               

               Cow position:
               chr24:21895123-21894976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               251-407
               

               Cow position:
               chr24:25165107-25164950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               254-372
               

               Cow position:
               chr24:18355278-18355161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               254-407
               

               Cow position:
               chr24:28045829-28045668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               64, 124
               

               Conread position:
               255-379
               

               Cow position:
               chr24:31578295-31578164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               255-407
               

               Cow position:
               chr24:3160900-3160752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr24:43432853-43432710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               268-407
               

               Cow position:
               chr24:40837828-40837694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 71
               

               Conread position:
               269-407
               

               Cow position:
               chr24:34565175-34565041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               274-407
               

               Cow position:
               chr24:32054711-32054577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               80-175
               

               Cow position:
               chr25:37649001-37648906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-206
               

               Cow position:
               chr25:1823874-1823995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               85-407
               

               Cow position:
               chr25:7012682-7012367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 7
               

               Conread position:
               86-330
               

               Cow position:
               chr25:36135899-36136124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               12, 94
               

               Conread position:
               88-407
               

               Cow position:
               chr25:34170181-34169885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 84
               

               Conread position:
               89-222
               

               Cow position:
               chr25:14212616-14212747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               104, 89
               

               Conread position:
               89-367
               

               Cow position:
               chr25:15218370-15218115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               89-407
               

               Cow position:
               chr25:21894621-21894947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 89
               

               Conread position:
               94-196
               

               Cow position:
               chr25:33663704-33663805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               94-202
               

               Cow position:
               chr25:38431821-38431714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               94-289
               

               Cow position:
               chr25:7329310-7329122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-347
               

               Cow position:
               chr25:7012935-7012665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               9, 164
               

               Conread position:
               94-405
               

               Cow position:
               chr25:38421911-38421607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               94-407
               

               Cow position:
               chr25:13672642-13672333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               188, 56
               

               Conread position:
               94-407
               

               Cow position:
               chr25:18906122-18905825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 78
               

               Conread position:
               94-407
               

               Cow position:
               chr25:40931527-40931214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               9, 105
               

               Conread position:
               96-225
               

               Cow position:
               chr25:25582108-25581972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               97-348
               

               Cow position:
               chr25:8223155-8222907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 8
               

               Conread position:
               97-352
               

               Cow position:
               chr25:13728709-13728447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               81, 111
               

               Conread position:
               99-252
               

               Cow position:
               chr25:33839961-33839807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               87, 6
               

               Conread position:
               99-331
               

               Cow position:
               chr25:9642736-9642516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               99-400
               

               Cow position:
               chr25:36017776-36017482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 50
               

               Conread position:
               99-407
               

               Cow position:
               chr25:36120729-36120442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               254, 6
               

               Conread position:
               100-372
               

               Cow position:
               chr25:26161201-26160939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 17
               

               Conread position:
               101-224
               

               Cow position:
               chr25:11841497-11841373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               101-315
               

               Cow position:
               chr25:31343834-31344064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               101-317
               

               Cow position:
               chr25:12899964-12899756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               96, 77
               

               Conread position:
               101-325
               

               Cow position:
               chr25:6942154-6942378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 78
               

               Conread position:
               101-406
               

               Cow position:
               chr25:26052130-26051841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               218, 70
               

               Conread position:
               102-404
               

               Cow position:
               chr25:36019442-36019726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               278, 74
               

               Conread position:
               110-404
               

               Cow position:
               chr25:23745479-23745199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               204, 34
               

               Conread position:
               116-365
               

               Cow position:
               chr25:17775214-17774963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               191, 54
               

               Conread position:
               116-405
               

               Cow position:
               chr25:13384669-13384395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 77
               

               Conread position:
               128-364
               

               Cow position:
               chr25:30624869-30625101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 18
               

               Conread position:
               161-405
               

               Cow position:
               chr25:17474330-17474572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               21, 47
               

               Conread position:
               164-407
               

               Cow position:
               chr25:12252629-12252873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               191
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               168-351
               

               Cow position:
               chr25:14224418-14224598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 40
               

               Conread position:
               170-345
               

               Cow position:
               chr25:23016199-23016021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               170-385
               

               Cow position:
               chr25:10359801-10359586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               181-332
               

               Cow position:
               chr25:13805179-13805027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 10
               

               Conread position:
               186-375
               

               Cow position:
               chr25:13321338-13321153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               192-385
               

               Cow position:
               chr25:28666604-28666409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               192-407
               

               Cow position:
               chr25:17144589-17144363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               193-406
               

               Cow position:
               chr25:22750858-22751068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               184, 14
               

               Conread position:
               194-407
               

               Cow position:
               chr25:14197013-14196799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr25:23917996-23917783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               12, 138
               

               Conread position:
               195-403
               

               Cow position:
               chr25:22531430-22531224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               189, 25
               

               Conread position:
               197-337
               

               Cow position:
               chr25:27520610-27520749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               198-407
               

               Cow position:
               chr25:36762251-36762044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               169, 33
               

               Conread position:
               205-372
               

               Cow position:
               chr25:20461242-20461081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               205-386
               

               Cow position:
               chr25:35109127-35109306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               14, 167
               

               Conread position:
               205-407
               

               Cow position:
               chr25:11585657-11585456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               176, 25
               

               Conread position:
               205-407
               

               Cow position:
               chr25:21245465-21245664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               206-377
               

               Cow position:
               chr25:4009233-4009062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-379
               

               Cow position:
               chr25:31762470-31762640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               207-407
               

               Cow position:
               chr25:1823961-1824158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               207-407
               

               Cow position:
               chr25:30619202-30619003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               208-345
               

               Cow position:
               chr25:23323628-23323491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               208-387
               

               Cow position:
               chr25:28597472-28597655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               208-447
               

               Cow position:
               chr25:3373242-3373480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               28, 58
               

               Conread position:
               210-407
               

               Cow position:
               chr25:12807174-12806983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               162, 94
               

               Conread position:
               215-402
               

               Cow position:
               chr25:24863006-24862820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               215-405
               

               Cow position:
               chr25:26701158-26700972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               216-407
               

               Cow position:
               chr25:17658742-17658547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr25:36555559-36555750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               217-380
               

               Cow position:
               chr25:13503563-13503398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               218-396
               

               Cow position:
               chr25:38958084-38957911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 95
               

               Conread position:
               218-407
               

               Cow position:
               chr25:18988512-18988326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               6, 28
               

               Conread position:
               221-331
               

               Cow position:
               chr25:26156653-26156762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               221-366
               

               Cow position:
               chr25:33101480-33101625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               221-406
               

               Cow position:
               chr25:14833538-14833721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               222-369
               

               Cow position:
               chr25:3744620-3744769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               222-378
               

               Cow position:
               chr25:6473963-6474119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-381
               

               Cow position:
               chr25:9615961-9615804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-385
               

               Cow position:
               chr25:15463711-15463548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               222-389
               

               Cow position:
               chr25:7673425-7673253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               113, 150
               

               Conread position:
               222-390
               

               Cow position:
               chr25:17704868-17704700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-405
               

               Cow position:
               chr25:7581302-7581483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               13, 149
               

               Conread position:
               222-407
               

               Cow position:
               chr25:5920205-5920023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               222-407
               

               Cow position:
               chr25:6682937-6683125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               22, 145
               

               Conread position:
               222-407
               

               Cow position:
               chr25:7216948-7216769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               156, 88
               

               Conread position:
               222-407
               

               Cow position:
               chr25:11316025-11315845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               108, 32
               

               Conread position:
               222-407
               

               Cow position:
               chr25:15273797-15273612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               149, 171
               

               Conread position:
               222-407
               

               Cow position:
               chr25:21893463-21893275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr25:36535296-36535497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               223-340
               

               Cow position:
               chr25:7311273-7311389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               223-345
               

               Cow position:
               chr25:36369941-36369820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               223-345
               

               Cow position:
               chr25:36375632-36375511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               223-379
               

               Cow position:
               chr25:15565880-15566039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               223-383
               

               Cow position:
               chr25:23779207-23779367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               113, 148
               

               Conread position:
               223-385
               

               Cow position:
               chr25:7380717-7380879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               149, 17
               

               Conread position:
               223-391
               

               Cow position:
               chr25:5474107-5474272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-400
               

               Cow position:
               chr25:20069843-20069669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               48, 89
               

               Conread position:
               223-406
               

               Cow position:
               chr25:432925-433109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               223-407
               

               Cow position:
               chr25:20008256-20008074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               104, 149
               

               Conread position:
               223-407
               

               Cow position:
               chr25:33555728-33555547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               224-420
               

               Cow position:
               chr25:16867363-16867166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               68, 154
               

               Conread position:
               225-352
               

               Cow position:
               chr25:34967388-34967515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               228-380
               

               Cow position:
               chr25:34782583-34782432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 106
               

               Conread position:
               228-383
               

               Cow position:
               chr25:30656531-30656683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               228-387
               

               Cow position:
               chr25:35339071-35339232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               229-407
               

               Cow position:
               chr25:9056295-9056121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               231-353
               

               Cow position:
               chr25:23998809-23998931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-359
               

               Cow position:
               chr25:36872941-36873069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-361
               

               Cow position:
               chr25:10791700-10791829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               231-377
               

               Cow position:
               chr25:22242078-22241940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               231-384
               

               Cow position:
               chr25:61765-61613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-385
               

               Cow position:
               chr25:33311211-33311364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               101, 141
               

               Conread position:
               231-390
               

               Cow position:
               chr25:9269458-9269303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               148, 81
               

               Conread position:
               231-390
               

               Cow position:
               chr25:21267102-21266946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               88, 50
               

               Conread position:
               231-393
               

               Cow position:
               chr25:26087636-26087471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               231-404
               

               Cow position:
               chr25:22179031-22178862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr25:6928393-6928567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               143, 113
               

               Conread position:
               231-405
               

               Cow position:
               chr25:10217934-10218106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr25:13325695-13325520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-406
               

               Cow position:
               chr25:33256469-33256295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 103
               

               Conread position:
               231-407
               

               Cow position:
               chr25:10504226-10504399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               142, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr25:13443295-13443474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               73, 125
               

               Conread position:
               231-407
               

               Cow position:
               chr25:15440667-15440837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               113, 24
               

               Conread position:
               231-407
               

               Cow position:
               chr25:16921681-16921856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 141
               

               Conread position:
               231-407
               

               Cow position:
               chr25:19363944-19364121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr25:20133200-20133373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               149, 26
               

               Conread position:
               231-407
               

               Cow position:
               chr25:22730943-22730768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               87, 57
               

               Conread position:
               231-407
               

               Cow position:
               chr25:25716760-25716590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr25:26655022-26654849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               231-407
               

               Cow position:
               chr25:28187830-28188007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               146
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               143, 124
               

               Conread position:
               231-407
               

               Cow position:
               chr25:35052507-35052682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               106, 141
               

               Conread position:
               231-407
               

               Cow position:
               chr25:36081990-36081816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               231-414
               

               Cow position:
               chr25:11038469-11038276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               232-404
               

               Cow position:
               chr25:9843290-9843116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               141, 163
               

               Conread position:
               232-407
               

               Cow position:
               chr25:4521727-4521897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr25:7641336-7641515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               233-376
               

               Cow position:
               chr25:35090456-35090604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               83, 42
               

               Conread position:
               233-388
               

               Cow position:
               chr25:40321176-40321327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               233-406
               

               Cow position:
               chr25:24202899-24203063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               140, 79
               

               Conread position:
               233-407
               

               Cow position:
               chr25:1838354-1838177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               101, 163
               

               Conread position:
               233-407
               

               Cow position:
               chr25:12097946-12097777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               153, 55
               

               Conread position:
               233-407
               

               Cow position:
               chr25:30817002-30816825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr25:38982206-38982042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               234-377
               

               Cow position:
               chr25:18288657-18288798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               234-396
               

               Cow position:
               chr25:34768622-34768784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               137, 19
               

               Conread position:
               234-407
               

               Cow position:
               chr25:13272681-13272506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               235-371
               

               Cow position:
               chr25:26072450-26072582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               235-376
               

               Cow position:
               chr25:36840507-36840366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               103, 56
               

               Conread position:
               235-378
               

               Cow position:
               chr25:34378994-34379138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               235-381
               

               Cow position:
               chr25:6258998-6258848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               235-383
               

               Cow position:
               chr25:4221492-4221639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               235-401
               

               Cow position:
               chr25:11956915-11956749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr25:13387919-13387742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 163
               

               Conread position:
               236-388
               

               Cow position:
               chr25:9939151-9939298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               236-406
               

               Cow position:
               chr25:10643199-10643369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr25:8961880-8961707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               136, 84
               

               Conread position:
               237-406
               

               Cow position:
               chr25:8157402-8157566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               133, 29
               

               Conread position:
               237-408
               

               Cow position:
               chr25:23817731-23817905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr25:26089710-26089877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               131, 115
               

               Conread position:
               244-404
               

               Cow position:
               chr25:18541844-18542007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr25:16064990-16064829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               127, 9
               

               Conread position:
               255-407
               

               Cow position:
               chr25:9349193-9349341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               255-407
               

               Cow position:
               chr25:15377417-15377263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               115, 55
               

               Conread position:
               255-407
               

               Cow position:
               chr25:38425448-38425301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr25:38135835-38135686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               262-391
               

               Cow position:
               chr25:30462224-30462349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               266-407
               

               Cow position:
               chr25:17342538-17342395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               114, 129
               

               Conread position:
               288-407
               

               Cow position:
               chr25:16361614-16361737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               304-407
               

               Cow position:
               chr25:9956996-9957100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 60
               

               Conread position:
               88-278
               

               Cow position:
               chr26:1952268-1952081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               89-192
               

               Cow position:
               chr26:10933696-10933805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               90-345
               

               Cow position:
               chr26:15599264-15599506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               90-404
               

               Cow position:
               chr26:32863389-32863707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 152
               

               Conread position:
               94-296
               

               Cow position:
               chr26:15111984-15112179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               156, 76
               

               Conread position:
               94-406
               

               Cow position:
               chr26:11263907-11263601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 46
               

               Conread position:
               97-337
               

               Cow position:
               chr26:28759569-28759792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               98-407
               

               Cow position:
               chr26:6865277-6864974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               102-389
               

               Cow position:
               chr26:34154385-34154106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               278, 58
               

               Conread position:
               102-407
               

               Cow position:
               chr26:31605648-31605364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               261, 52
               

               Conread position:
               105-202
               

               Cow position:
               chr26:16784039-16783943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               8, 75
               

               Conread position:
               106-351
               

               Cow position:
               chr26:7183734-7183983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               106-407
               

               Cow position:
               chr26:14578568-14578285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               268, 65
               

               Conread position:
               106-407
               

               Cow position:
               chr26:19774063-19774343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 64
               

               Conread position:
               116-407
               

               Cow position:
               chr26:2530944-2531222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               75, 60
               

               Conread position:
               145-407
               

               Cow position:
               chr26:15212022-15211760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 8
               

               Conread position:
               157-407
               

               Cow position:
               chr26:12964491-12964738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 5
               

               Conread position:
               161-407
               

               Cow position:
               chr26:7314904-7315146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               62, 10
               

               Conread position:
               168-400
               

               Cow position:
               chr26:22152422-22152191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 62
               

               Conread position:
               170-344
               

               Cow position:
               chr26:27760716-27760888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               171-407
               

               Cow position:
               chr26:9604759-9604521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               171-427
               

               Cow position:
               chr26:2703455-2703709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               113, 31
               

               Conread position:
               174-407
               

               Cow position:
               chr26:30568472-30568699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               181-402
               

               Cow position:
               chr26:26294010-26294233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               187-401
               

               Cow position:
               chr26:9104101-9104317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               194-390
               

               Cow position:
               chr26:7212415-7212614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               69, 12
               

               Conread position:
               195-341
               

               Cow position:
               chr26:32825830-32825976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               199-407
               

               Cow position:
               chr26:32776348-32776549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               180, 7
               

               Conread position:
               204-400
               

               Cow position:
               chr26:12237870-12238065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               169, 31
               

               Conread position:
               205-367
               

               Cow position:
               chr26:33526859-33527016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               205-407
               

               Cow position:
               chr26:8699883-8700089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               18, 185
               

               Conread position:
               206-345
               

               Cow position:
               chr26:7154027-7153890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               206-372
               

               Cow position:
               chr26:16594343-16594506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               206-404
               

               Cow position:
               chr26:33392553-33392354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               180, 157
               

               Conread position:
               206-407
               

               Cow position:
               chr26:9839391-9839581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr26:24453750-24453948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               207-348
               

               Cow position:
               chr26:6823313-6823176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               207-381
               

               Cow position:
               chr26:16435497-16435673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               208-407
               

               Cow position:
               chr26:32834424-32834615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               213-407
               

               Cow position:
               chr26:16922089-16921897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               216-383
               

               Cow position:
               chr26:6714150-6714317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               7, 124
               

               Conread position:
               216-407
               

               Cow position:
               chr26:20291542-20291734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               7, 178
               

               Conread position:
               216-407
               

               Cow position:
               chr26:28251305-28251108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 7
               

               Conread position:
               217-382
               

               Cow position:
               chr26:178382-178217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               106, 156
               

               Conread position:
               217-407
               

               Cow position:
               chr26:8353116-8352920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               157, 6
               

               Conread position:
               218-340
               

               Cow position:
               chr26:33038075-33038198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               219-407
               

               Cow position:
               chr26:32601499-32601310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 139
               

               Conread position:
               219-407
               

               Cow position:
               chr26:34060479-34060292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               165, 152
               

               Conread position:
               221-380
               

               Cow position:
               chr26:32120770-32120618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               155, 86
               

               Conread position:
               221-405
               

               Cow position:
               chr26:22348868-22349054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               73, 95
               

               Conread position:
               221-406
               

               Cow position:
               chr26:31633874-31633688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               8, 152
               

               Conread position:
               221-407
               

               Cow position:
               chr26:21243237-21243060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr26:35449207-35449018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               222-390
               

               Cow position:
               chr26:32571436-32571270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               222-401
               

               Cow position:
               chr26:30254491-30254665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               222-404
               

               Cow position:
               chr26:28423429-28423247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               160, 101
               

               Conread position:
               222-406
               

               Cow position:
               chr26:4585070-4585249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr26:25074859-25074677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr26:5168534-5168350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               148, 9
               

               Conread position:
               222-407
               

               Cow position:
               chr26:8202995-8202810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               60, 34
               

               Conread position:
               222-407
               

               Cow position:
               chr26:15200371-15200557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               12, 93
               

               Conread position:
               222-407
               

               Cow position:
               chr26:22354557-22354372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               47, 171
               

               Conread position:
               223-359
               

               Cow position:
               chr26:16796068-16796200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               223-379
               

               Cow position:
               chr26:32831439-32831588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 78
               

               Conread position:
               223-380
               

               Cow position:
               chr26:10974272-10974117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               223-400
               

               Cow position:
               chr26:17057821-17057646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               76, 149
               

               Conread position:
               223-404
               

               Cow position:
               chr26:9535658-9535478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               149, 56
               

               Conread position:
               223-405
               

               Cow position:
               chr26:25526391-25526207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr26:4807696-4807520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr26:19459836-19459643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr26:23097052-23097225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               151, 67
               

               Conread position:
               223-407
               

               Cow position:
               chr26:33253174-33253361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr26:33475838-33475647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               224-336
               

               Cow position:
               chr26:8341636-8341525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               224-369
               

               Cow position:
               chr26:19671615-19671474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               224-379
               

               Cow position:
               chr26:11672438-11672284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               224-382
               

               Cow position:
               chr26:29664016-29664176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               224-404
               

               Cow position:
               chr26:19636435-19636251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               70, 173
               

               Conread position:
               225-381
               

               Cow position:
               chr26:32563487-32563336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               226-343
               

               Cow position:
               chr26:8819438-8819554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               226-366
               

               Cow position:
               chr26:22901126-22901262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               226-401
               

               Cow position:
               chr26:11371047-11370876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               231-352
               

               Cow position:
               chr26:28446717-28446596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               231-362
               

               Cow position:
               chr26:9501842-9501712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               101, 89
               

               Conread position:
               231-376
               

               Cow position:
               chr26:32655474-32655621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               39, 43
               

               Conread position:
               231-377
               

               Cow position:
               chr26:34026903-34027048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-379
               

               Cow position:
               chr26:29889380-29889524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-379
               

               Cow position:
               chr26:33242023-33241875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-381
               

               Cow position:
               chr26:28374309-28374459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-400
               

               Cow position:
               chr26:6794284-6794112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 143
               

               Conread position:
               231-404
               

               Cow position:
               chr26:829939-829764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr26:31903300-31903126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               231-405
               

               Cow position:
               chr26:34314824-34314650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               231-406
               

               Cow position:
               chr26:32830214-32830042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr26:33011536-33011708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr26:613539-613719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               102, 59
               

               Conread position:
               231-407
               

               Cow position:
               chr26:3706925-3706753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr26:7687110-7687282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               231-407
               

               Cow position:
               chr26:12893294-12893467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr26:22249349-22249519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr26:24240813-24240634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               143, 80
               

               Conread position:
               232-357
               

               Cow position:
               chr26:5407112-5406987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-366
               

               Cow position:
               chr26:27594747-27594615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr26:33566911-33567087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               138, 110
               

               Conread position:
               233-376
               

               Cow position:
               chr26:30026356-30026218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               233-405
               

               Cow position:
               chr26:32836371-32836201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               233-406
               

               Cow position:
               chr26:23671547-23671373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               141, 9
               

               Conread position:
               235-386
               

               Cow position:
               chr26:20551274-20551126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               141, 85
               

               Conread position:
               235-407
               

               Cow position:
               chr26:16550118-16549943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               235-420
               

               Cow position:
               chr26:33745029-33744849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               130, 58
               

               Conread position:
               236-369
               

               Cow position:
               chr26:32353591-32353724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-387
               

               Cow position:
               chr26:7224212-7224366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               17, 22
               

               Conread position:
               236-405
               

               Cow position:
               chr26:5985688-5985854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               137, 72
               

               Conread position:
               236-407
               

               Cow position:
               chr26:10965464-10965635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 136
               

               Conread position:
               237-406
               

               Cow position:
               chr26:34108886-34108718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               104, 83
               

               Conread position:
               238-407
               

               Cow position:
               chr26:5246351-5246521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               239-407
               

               Cow position:
               chr26:23623919-23624087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               137, 17
               

               Conread position:
               242-407
               

               Cow position:
               chr26:32672305-32672478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               76, 138
               

               Conread position:
               243-373
               

               Cow position:
               chr26:1325879-1325749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-400
               

               Cow position:
               chr26:26466610-26466763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               243-406
               

               Cow position:
               chr26:33045202-33045041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               131, 13
               

               Conread position:
               243-407
               

               Cow position:
               chr26:8643063-8642903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               129, 69
               

               Conread position:
               243-407
               

               Cow position:
               chr26:34106515-34106357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr26:25394160-25393989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               249-384
               

               Cow position:
               chr26:10939088-10938952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               252-371
               

               Cow position:
               chr26:4172340-4172458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr26:32670392-32670537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               108, 49
               

               Conread position:
               263-405
               

               Cow position:
               chr26:25299701-25299561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               263-407
               

               Cow position:
               chr26:22602936-22603081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               277-407
               

               Cow position:
               chr26:21992190-21992061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               107, 97
               

               Conread position:
               282-407
               

               Cow position:
               chr26:6486568-6486696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               83-340
               

               Cow position:
               chr27:29659001-29658767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               83-411
               

               Cow position:
               chr27:1789441-1789117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 95
               

               Conread position:
               86-176
               

               Cow position:
               chr27:31170331-31170241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               87-407
               

               Cow position:
               chr27:30988516-30988811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               88-318
               

               Cow position:
               chr27:342368-342603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 208
               

               Conread position:
               88-348
               

               Cow position:
               chr27:17919006-17918761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               44, 95
               

               Conread position:
               89-219
               

               Cow position:
               chr27:4155287-4155152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               89-347
               

               Cow position:
               chr27:9697358-9697608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               107, 78
               

               Conread position:
               94-201
               

               Cow position:
               chr27:20067182-20067073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 94
               

               Conread position:
               94-383
               

               Cow position:
               chr27:28035125-28034860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               94-392
               

               Cow position:
               chr27:23482936-23483225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               74, 12
               

               Conread position:
               94-407
               

               Cow position:
               chr27:706642-706966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               141, 98
               

               Conread position:
               95-201
               

               Cow position:
               chr27:2685189-2685292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               95-332
               

               Cow position:
               chr27:19823061-19823282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               96-238
               

               Cow position:
               chr27:30293171-30293031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 82
               

               Conread position:
               97-343
               

               Cow position:
               chr27:16237341-16237578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               99-217
               

               Cow position:
               chr27:28002049-28001932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               99-367
               

               Cow position:
               chr27:19755804-19756071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               27, 83
               

               Conread position:
               99-408
               

               Cow position:
               chr27:15343548-15343264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               101-315
               

               Cow position:
               chr27:26503147-26502935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               85, 21
               

               Conread position:
               101-359
               

               Cow position:
               chr27:11466760-11466498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               77, 138
               

               Conread position:
               101-407
               

               Cow position:
               chr27:15214950-15215248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               144, 68
               

               Conread position:
               102-395
               

               Cow position:
               chr27:20275308-20275596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               222, 75
               

               Conread position:
               102-406
               

               Cow position:
               chr27:18923102-18922816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               272, 54
               

               Conread position:
               105-219
               

               Cow position:
               chr27:19717658-19717771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 81
               

               Conread position:
               105-352
               

               Cow position:
               chr27:23023730-23023965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               140, 60
               

               Conread position:
               106-378
               

               Cow position:
               chr27:25372655-25372390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               71, 192
               

               Conread position:
               107-381
               

               Cow position:
               chr27:27673296-27673027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 70
               

               Conread position:
               116-372
               

               Cow position:
               chr27:13917144-13917419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 160
               

               Conread position:
               117-330
               

               Cow position:
               chr27:17927383-17927176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               68, 61
               

               Conread position:
               122-386
               

               Cow position:
               chr27:23545594-23545335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               128-363
               

               Cow position:
               chr27:22723966-22723722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               139-406
               

               Cow position:
               chr27:4386301-4386047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               153-310
               

               Cow position:
               chr27:23489097-23488942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 9
               

               Conread position:
               155-407
               

               Cow position:
               chr27:20085317-20085579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               157-376
               

               Cow position:
               chr27:6674050-6674263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               30, 5
               

               Conread position:
               159-407
               

               Cow position:
               chr27:15642941-15643186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               166-383
               

               Cow position:
               chr27:30489638-30489420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               31, 202
               

               Conread position:
               168-406
               

               Cow position:
               chr27:30359179-30359422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               171-364
               

               Cow position:
               chr27:22179990-22179797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 144
               

               Conread position:
               171-407
               

               Cow position:
               chr27:19589252-19589491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               64, 73
               

               Conread position:
               176-343
               

               Cow position:
               chr27:22268019-22268176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               176-396
               

               Cow position:
               chr27:13251794-13252012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 155
               

               Conread position:
               179-405
               

               Cow position:
               chr27:20584665-20584444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               188-378
               

               Cow position:
               chr27:26090514-26090324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               189-425
               

               Cow position:
               chr27:27064645-27064406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               194-353
               

               Cow position:
               chr27:27255789-27255949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-383
               

               Cow position:
               chr27:28290664-28290845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 121
               

               Conread position:
               196-348
               

               Cow position:
               chr27:20543525-20543676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               196-387
               

               Cow position:
               chr27:6302664-6302474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               197-404
               

               Cow position:
               chr27:22348296-22348499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               197-407
               

               Cow position:
               chr27:24227994-24227779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               199-371
               

               Cow position:
               chr27:29319222-29319390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               199-382
               

               Cow position:
               chr27:30908482-30908661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               199-407
               

               Cow position:
               chr27:22454968-22454763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               200-407
               

               Cow position:
               chr27:16088613-16088824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               6, 21
               

               Conread position:
               205-376
               

               Cow position:
               chr27:29991635-29991462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               205-406
               

               Cow position:
               chr27:17918497-17918301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               160
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               206-383
               

               Cow position:
               chr27:24303763-24303939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               42, 24
               

               Conread position:
               206-390
               

               Cow position:
               chr27:4155818-4155993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               207-407
               

               Cow position:
               chr27:27270726-27270523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               133, 33
               

               Conread position:
               209-407
               

               Cow position:
               chr27:29236383-29236596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               125, 21
               

               Conread position:
               210-352
               

               Cow position:
               chr27:27551134-27550993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               126, 36
               

               Conread position:
               212-403
               

               Cow position:
               chr27:20812724-20812917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               158
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               12, 176
               

               Conread position:
               213-407
               

               Cow position:
               chr27:23452282-23452474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               11, 111
               

               Conread position:
               214-407
               

               Cow position:
               chr27:17397631-17397436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               160, 9
               

               Conread position:
               216-406
               

               Cow position:
               chr27:16705076-16705266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               162, 7
               

               Conread position:
               216-407
               

               Cow position:
               chr27:20514648-20514836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               153, 8
               

               Conread position:
               218-345
               

               Cow position:
               chr27:1184353-1184224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               218-376
               

               Cow position:
               chr27:18435308-18435149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               218-406
               

               Cow position:
               chr27:26413428-26413239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               221-406
               

               Cow position:
               chr27:31148591-31148775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               153, 32
               

               Conread position:
               221-407
               

               Cow position:
               chr27:3306604-3306785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               221-451
               

               Cow position:
               chr27:2034339-2034574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               125, 21
               

               Conread position:
               222-352
               

               Cow position:
               chr27:16246632-16246767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-361
               

               Cow position:
               chr27:788966-788828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               222-375
               

               Cow position:
               chr27:7412223-7412375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               222-376
               

               Cow position:
               chr27:31386801-31386645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               222-385
               

               Cow position:
               chr27:6241362-6241199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-385
               

               Cow position:
               chr27:13940727-13940565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               222-388
               

               Cow position:
               chr27:27641180-27641015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               157, 34
               

               Conread position:
               222-390
               

               Cow position:
               chr27:23594152-23594321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               157, 78
               

               Conread position:
               222-400
               

               Cow position:
               chr27:1768793-1768612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               150, 112
               

               Conread position:
               222-400
               

               Cow position:
               chr27:15867220-15867405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               222-400
               

               Cow position:
               chr27:25809685-25809513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-403
               

               Cow position:
               chr27:1190643-1190464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               28, 37
               

               Conread position:
               222-405
               

               Cow position:
               chr27:26437291-26437105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr27:24371073-24371253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr27:1291018-1290836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               150, 18
               

               Conread position:
               222-407
               

               Cow position:
               chr27:2592372-2592563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr27:12459119-12459300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               160, 90
               

               Conread position:
               222-407
               

               Cow position:
               chr27:16103642-16103823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               164, 53
               

               Conread position:
               222-407
               

               Cow position:
               chr27:22423347-22423525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr27:23882539-23882363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               222-407
               

               Cow position:
               chr27:25151924-25152097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr27:27039007-27038823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               148, 95
               

               Conread position:
               222-407
               

               Cow position:
               chr27:28260705-28260522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               222-432
               

               Cow position:
               chr27:212786-213004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               76, 95
               

               Conread position:
               223-350
               

               Cow position:
               chr27:26400890-26400763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-371
               

               Cow position:
               chr27:14957894-14957750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               223-376
               

               Cow position:
               chr27:20552950-20552794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               223-379
               

               Cow position:
               chr27:23895256-23895407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               223-382
               

               Cow position:
               chr27:27558671-27558514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 69
               

               Conread position:
               223-400
               

               Cow position:
               chr27:30872225-30872051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-405
               

               Cow position:
               chr27:18882484-18882668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               143, 34
               

               Conread position:
               223-406
               

               Cow position:
               chr27:28922061-28921883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               93, 82
               

               Conread position:
               223-407
               

               Cow position:
               chr27:8962417-8962241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               123, 24
               

               Conread position:
               223-407
               

               Cow position:
               chr27:10979694-10979878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr27:11561606-11561791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr27:20749180-20748992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               223-407
               

               Cow position:
               chr27:24331552-24331736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               159, 113
               

               Conread position:
               223-407
               

               Cow position:
               chr27:28518127-28518310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               110, 150
               

               Conread position:
               223-407
               

               Cow position:
               chr27:28896712-28896895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-407
               

               Cow position:
               chr27:30764867-30765051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               148, 58
               

               Conread position:
               224-407
               

               Cow position:
               chr27:29831869-29831683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               27, 149
               

               Conread position:
               226-381
               

               Cow position:
               chr27:8790909-8790752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               226-403
               

               Cow position:
               chr27:22559989-22559813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               147, 91
               

               Conread position:
               226-407
               

               Cow position:
               chr27:23632435-23632611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr27:29380689-29380871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               41, 47
               

               Conread position:
               228-390
               

               Cow position:
               chr27:12246491-12246651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               228-441
               

               Cow position:
               chr27:31017989-31017786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               230-369
               

               Cow position:
               chr27:22654761-22654898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               230-407
               

               Cow position:
               chr27:22225754-22225580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               144, 80
               

               Conread position:
               231-334
               

               Cow position:
               chr27:18491396-18491498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               231-346
               

               Cow position:
               chr27:27747626-27747511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-349
               

               Cow position:
               chr27:10443259-10443140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               231-374
               

               Cow position:
               chr27:29388510-29388654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               231-378
               

               Cow position:
               chr27:12191640-12191492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               16, 123
               

               Conread position:
               231-402
               

               Cow position:
               chr27:26188669-26188840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               145, 89
               

               Conread position:
               231-404
               

               Cow position:
               chr27:6541471-6541641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               146, 129
               

               Conread position:
               231-406
               

               Cow position:
               chr27:1637096-1636921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr27:8263499-8263321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr27:15865446-15865625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr27:6924924-6925104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr27:14303577-14303749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               99, 86
               

               Conread position:
               231-407
               

               Cow position:
               chr27:16231098-16230921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr27:16965416-16965588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               63, 104
               

               Conread position:
               231-407
               

               Cow position:
               chr27:17472652-17472824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               141, 63
               

               Conread position:
               231-407
               

               Cow position:
               chr27:20336941-20337116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               140, 94
               

               Conread position:
               231-407
               

               Cow position:
               chr27:20901400-20901584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               69, 150
               

               Conread position:
               231-407
               

               Cow position:
               chr27:21453255-21453077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr27:22603025-22603191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr27:23860005-23860183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 43
               

               Conread position:
               231-407
               

               Cow position:
               chr27:30914849-30915022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-408
               

               Cow position:
               chr27:26347772-26347599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               232-369
               

               Cow position:
               chr27:23216476-23216341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               121, 68
               

               Conread position:
               232-379
               

               Cow position:
               chr27:31170220-31170078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               232-405
               

               Cow position:
               chr27:1353423-1353600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               232-407
               

               Cow position:
               chr27:7974017-7974189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               232-407
               

               Cow position:
               chr27:12596617-12596780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               116, 80
               

               Conread position:
               232-407
               

               Cow position:
               chr27:13875576-13875746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               232-407
               

               Cow position:
               chr27:30868908-30868725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               19, 150
               

               Conread position:
               232-423
               

               Cow position:
               chr27:28478420-28478613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               142, 147
               

               Conread position:
               233-388
               

               Cow position:
               chr27:27438664-27438510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 72
               

               Conread position:
               233-406
               

               Cow position:
               chr27:26112074-26111896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               233-406
               

               Cow position:
               chr27:28271309-28271137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               233-407
               

               Cow position:
               chr27:12425132-12425304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               233-407
               

               Cow position:
               chr27:17995102-17994928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               233-407
               

               Cow position:
               chr27:26490067-26489890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               235-334
               

               Cow position:
               chr27:21951135-21951036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-347
               

               Cow position:
               chr27:18791668-18791554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               235-356
               

               Cow position:
               chr27:674187-674065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               235-362
               

               Cow position:
               chr27:7958985-7958860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               235-372
               

               Cow position:
               chr27:22245470-22245606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               235-379
               

               Cow position:
               chr27:16512328-16512185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-400
               

               Cow position:
               chr27:8062507-8062344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 22
               

               Conread position:
               235-400
               

               Cow position:
               chr27:18507493-18507656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               235-402
               

               Cow position:
               chr27:24477260-24477426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               235-403
               

               Cow position:
               chr27:21393665-21393499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               8, 135
               

               Conread position:
               235-407
               

               Cow position:
               chr27:10653528-10653701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               32, 38
               

               Conread position:
               235-407
               

               Cow position:
               chr27:15925189-15925356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr27:22418923-22418752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               139, 96
               

               Conread position:
               236-359
               

               Cow position:
               chr27:19452846-19452969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-372
               

               Cow position:
               chr27:7935313-7935176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               236-406
               

               Cow position:
               chr27:25276987-25277155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               144, 76
               

               Conread position:
               236-407
               

               Cow position:
               chr27:19546667-19546496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               138, 63
               

               Conread position:
               236-407
               

               Cow position:
               chr27:26581592-26581421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               158, 139
               

               Conread position:
               237-420
               

               Cow position:
               chr27:19544075-19543890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               238-386
               

               Cow position:
               chr27:10992203-10992348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               136, 74
               

               Conread position:
               242-369
               

               Cow position:
               chr27:15332447-15332318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               242-401
               

               Cow position:
               chr27:11435470-11435313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               132, 28
               

               Conread position:
               243-381
               

               Cow position:
               chr27:29841881-29841744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               243-406
               

               Cow position:
               chr27:23890789-23890953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               136, 128
               

               Conread position:
               243-407
               

               Cow position:
               chr27:30354493-30354328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               244-359
               

               Cow position:
               chr27:6162558-6162443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               244-404
               

               Cow position:
               chr27:16284328-16284489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               145, 12
               

               Conread position:
               244-405
               

               Cow position:
               chr27:20497058-20497224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr27:18593125-18593284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr27:29184985-29184823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               141, 130
               

               Conread position:
               245-369
               

               Cow position:
               chr27:7731404-7731280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-404
               

               Cow position:
               chr27:26920057-26919891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               125, 13
               

               Conread position:
               246-407
               

               Cow position:
               chr27:17646314-17646152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               247-388
               

               Cow position:
               chr27:26428276-26428134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               126, 10
               

               Conread position:
               247-407
               

               Cow position:
               chr27:26786135-26785975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               249-407
               

               Cow position:
               chr27:2885974-2885817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               132, 9
               

               Conread position:
               253-406
               

               Cow position:
               chr27:1058814-1058665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               130, 20
               

               Conread position:
               260-407
               

               Cow position:
               chr27:28472649-28472798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 16
               

               Conread position:
               261-407
               

               Cow position:
               chr27:21975922-21976064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               263-407
               

               Cow position:
               chr27:4858768-4858623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               264-383
               

               Cow position:
               chr27:30672686-30672566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               269-405
               

               Cow position:
               chr27:25379865-25380006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               277-407
               

               Cow position:
               chr27:20056083-20055955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 99
               

               Conread position:
               282-405
               

               Cow position:
               chr27:24999850-24999727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               58-195
               

               Cow position:
               chr28:32203371-32203235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               82-380
               

               Cow position:
               chr28:14934224-14933931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 96
               

               Conread position:
               86-183
               

               Cow position:
               chr28:6301304-6301206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               87-348
               

               Cow position:
               chr28:2743335-2743086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 93
               

               Conread position:
               88-384
               

               Cow position:
               chr28:10999411-10999701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               61, 69
               

               Conread position:
               89-400
               

               Cow position:
               chr28:19079581-19079891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 89
               

               Conread position:
               89-441
               

               Cow position:
               chr28:7388525-7388854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               134, 27
               

               Conread position:
               90-210
               

               Cow position:
               chr28:4923620-4923499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               6, 89
               

               Conread position:
               94-183
               

               Cow position:
               chr28:18791246-18791158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               78
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-238
               

               Cow position:
               chr28:20614339-20614485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-406
               

               Cow position:
               chr28:8408971-8408682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               94-407
               

               Cow position:
               chr28:4873112-4873402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               278, 76
               

               Conread position:
               95-220
               

               Cow position:
               chr28:28075561-28075687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               6, 84
               

               Conread position:
               95-385
               

               Cow position:
               chr28:19025729-19026036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               84, 294
               

               Conread position:
               95-399
               

               Cow position:
               chr28:4536722-4536408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 86
               

               Conread position:
               96-191
               

               Cow position:
               chr28:26820066-26820159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               97-356
               

               Cow position:
               chr28:25487809-25488050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               97-366
               

               Cow position:
               chr28:3396926-3397210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               77, 214
               

               Conread position:
               99-236
               

               Cow position:
               chr28:19024657-19024521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               87, 78
               

               Conread position:
               101-265
               

               Cow position:
               chr28:11271620-11271780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               101-327
               

               Cow position:
               chr28:8259065-8258850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               106-407
               

               Cow position:
               chr28:4841141-4841452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 128
               

               Conread position:
               106-407
               

               Cow position:
               chr28:25806797-25806519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               110-407
               

               Cow position:
               chr28:16110164-16109883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               225
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               143, 26
               

               Conread position:
               116-407
               

               Cow position:
               chr28:8021879-8022163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               258, 27
               

               Conread position:
               162-407
               

               Cow position:
               chr28:2752309-2752548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               210, 35
               

               Conread position:
               168-407
               

               Cow position:
               chr28:8147677-8147915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               23, 10
               

               Conread position:
               169-407
               

               Cow position:
               chr28:3914899-3914658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               167, 21
               

               Conread position:
               171-386
               

               Cow position:
               chr28:34247851-34248061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               172-331
               

               Cow position:
               chr28:11365352-11365505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               173-406
               

               Cow position:
               chr28:20313462-20313223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               175-390
               

               Cow position:
               chr28:7497970-7498187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               177-406
               

               Cow position:
               chr28:18354148-18354376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 142
               

               Conread position:
               179-407
               

               Cow position:
               chr28:2960656-2960887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               185-407
               

               Cow position:
               chr28:32174791-32174576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 14
               

               Conread position:
               187-404
               

               Cow position:
               chr28:15043696-15043914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               188-353
               

               Cow position:
               chr28:8102778-8102945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               193-349
               

               Cow position:
               chr28:12385137-12385289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               193-407
               

               Cow position:
               chr28:33052201-33051975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               194-383
               

               Cow position:
               chr28:2772866-2772683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               194-405
               

               Cow position:
               chr28:29434270-29434484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               179, 13
               

               Conread position:
               195-351
               

               Cow position:
               chr28:29041892-29042052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               195-369
               

               Cow position:
               chr28:5867881-5867711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 139
               

               Conread position:
               196-394
               

               Cow position:
               chr28:32179847-32179656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               198-348
               

               Cow position:
               chr28:20013593-20013440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               199-405
               

               Cow position:
               chr28:25677187-25677398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               203-407
               

               Cow position:
               chr28:25400019-25399819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               17, 31
               

               Conread position:
               204-406
               

               Cow position:
               chr28:7267798-7267996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               205-315
               

               Cow position:
               chr28:25518616-25518727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               205-349
               

               Cow position:
               chr28:5152751-5152605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               205-379
               

               Cow position:
               chr28:18770231-18770058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               205-407
               

               Cow position:
               chr28:19222004-19222204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               169, 30
               

               Conread position:
               205-407
               

               Cow position:
               chr28:27161179-27161381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 84
               

               Conread position:
               207-377
               

               Cow position:
               chr28:1632511-1632677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               162, 125
               

               Conread position:
               207-407
               

               Cow position:
               chr28:4823750-4823553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               208-407
               

               Cow position:
               chr28:7437326-7437513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 84
               

               Conread position:
               210-380
               

               Cow position:
               chr28:31987876-31987707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               148, 13
               

               Conread position:
               214-381
               

               Cow position:
               chr28:10615806-10615974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               215-405
               

               Cow position:
               chr28:11348561-11348374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               215-407
               

               Cow position:
               chr28:17012170-17012345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               216-383
               

               Cow position:
               chr28:10958938-10958763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 7
               

               Conread position:
               217-348
               

               Cow position:
               chr28:16692060-16691928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               217-361
               

               Cow position:
               chr28:30081590-30081732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               218-383
               

               Cow position:
               chr28:19216956-19216791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               159, 93
               

               Conread position:
               218-390
               

               Cow position:
               chr28:17948978-17949153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               219-350
               

               Cow position:
               chr28:9418832-9418963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               219-407
               

               Cow position:
               chr28:9100061-9099881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               5, 52
               

               Conread position:
               219-407
               

               Cow position:
               chr28:9285243-9285427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               155, 80
               

               Conread position:
               220-440
               

               Cow position:
               chr28:662240-662023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               221-370
               

               Cow position:
               chr28:3143746-3143892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               130
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               221-384
               

               Cow position:
               chr28:23724330-23724491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               75, 20
               

               Conread position:
               221-387
               

               Cow position:
               chr28:12991274-12991103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               112, 156
               

               Conread position:
               221-404
               

               Cow position:
               chr28:7619016-7619203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr28:23410191-23410378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               85, 157
               

               Conread position:
               221-427
               

               Cow position:
               chr28:10297983-10297786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               190, 91
               

               Conread position:
               222-343
               

               Cow position:
               chr28:19024564-19024443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-361
               

               Cow position:
               chr28:8396466-8396327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-363
               

               Cow position:
               chr28:19038888-19039029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-366
               

               Cow position:
               chr28:10163926-10163787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               222-379
               

               Cow position:
               chr28:4355677-4355519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               133, 40
               

               Conread position:
               222-382
               

               Cow position:
               chr28:6975372-6975211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               222-383
               

               Cow position:
               chr28:8149501-8149663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               135
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-383
               

               Cow position:
               chr28:24707030-24706867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               222-389
               

               Cow position:
               chr28:17739953-17739790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               222-399
               

               Cow position:
               chr28:5204326-5204147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr28:4013215-4013033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr28:4016662-4016479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr28:5436958-5437141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               152, 55
               

               Conread position:
               222-407
               

               Cow position:
               chr28:7008845-7009030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               7, 155
               

               Conread position:
               222-407
               

               Cow position:
               chr28:7350785-7350604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr28:9812402-9812222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               152, 48
               

               Conread position:
               222-407
               

               Cow position:
               chr28:25249485-25249300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               179, 149
               

               Conread position:
               222-407
               

               Cow position:
               chr28:26743757-26743571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               153
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               222-435
               

               Cow position:
               chr28:17601423-17601633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               183, 149
               

               Conread position:
               223-347
               

               Cow position:
               chr28:117632-117757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               223-348
               

               Cow position:
               chr28:4022803-4022678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-349
               

               Cow position:
               chr28:8167224-8167346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               223-353
               

               Cow position:
               chr28:4163453-4163579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               223-368
               

               Cow position:
               chr28:5441769-5441913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               130, 68
               

               Conread position:
               223-373
               

               Cow position:
               chr28:2899119-2898969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-376
               

               Cow position:
               chr28:2819905-2819752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-376
               

               Cow position:
               chr28:3408089-3408241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               223-380
               

               Cow position:
               chr28:23047748-23047594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               223-381
               

               Cow position:
               chr28:11398667-11398825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-385
               

               Cow position:
               chr28:24646721-24646562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               223-386
               

               Cow position:
               chr28:19262457-19262619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               151, 139
               

               Conread position:
               223-387
               

               Cow position:
               chr28:5630226-5630065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               223-387
               

               Cow position:
               chr28:21008537-21008697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               223-390
               

               Cow position:
               chr28:17680752-17680584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               223-393
               

               Cow position:
               chr28:23793182-23793350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               223-405
               

               Cow position:
               chr28:3011140-3011324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               61, 82
               

               Conread position:
               223-406
               

               Cow position:
               chr28:3449442-3449249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               46, 157
               

               Conread position:
               223-406
               

               Cow position:
               chr28:5236474-5236656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-406
               

               Cow position:
               chr28:5931479-5931301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               159, 29
               

               Conread position:
               223-406
               

               Cow position:
               chr28:11866535-11866719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               223-406
               

               Cow position:
               chr28:11987301-11987119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               102, 67
               

               Conread position:
               223-406
               

               Cow position:
               chr28:12055539-12055357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               102, 67
               

               Conread position:
               223-406
               

               Cow position:
               chr28:28765773-28765957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr28:751355-751177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr28:7697852-7698033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               158, 89
               

               Conread position:
               223-407
               

               Cow position:
               chr28:11559502-11559689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr28:12672334-12672516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 149
               

               Conread position:
               223-407
               

               Cow position:
               chr28:26982608-26982790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr28:5144392-5144573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr28:16085453-16085270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               224-445
               

               Cow position:
               chr28:4881111-4881327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 147
               

               Conread position:
               225-388
               

               Cow position:
               chr28:12933602-12933770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               225-399
               

               Cow position:
               chr28:3492656-3492830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               149, 105
               

               Conread position:
               225-407
               

               Cow position:
               chr28:21598124-21598307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               30, 7
               

               Conread position:
               226-407
               

               Cow position:
               chr28:7371995-7372175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               148, 160
               

               Conread position:
               228-405
               

               Cow position:
               chr28:9426225-9426403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               230-400
               

               Cow position:
               chr28:11817841-11818013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               40, 144
               

               Conread position:
               231-346
               

               Cow position:
               chr28:20046673-20046560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               231-353
               

               Cow position:
               chr28:12974003-12973881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               231-365
               

               Cow position:
               chr28:15362703-15362567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               231-371
               

               Cow position:
               chr28:5232057-5231920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               231-381
               

               Cow position:
               chr28:5254996-5254845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr28:12951539-12951393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               231-393
               

               Cow position:
               chr28:19295012-19295167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               231-405
               

               Cow position:
               chr28:13245683-13245508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr28:19564108-19564283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               142, 16
               

               Conread position:
               231-407
               

               Cow position:
               chr28:4307774-4307957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               231-407
               

               Cow position:
               chr28:5166889-5166713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               150, 79
               

               Conread position:
               231-407
               

               Cow position:
               chr28:7776379-7776557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               100, 22
               

               Conread position:
               231-407
               

               Cow position:
               chr28:10053203-10053386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr28:13090404-13090580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr28:18759933-18760101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               152, 54
               

               Conread position:
               231-407
               

               Cow position:
               chr28:20759580-20759755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr28:21363862-21363692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               149, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr28:22321541-22321373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr28:26922246-26922420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               232-352
               

               Cow position:
               chr28:26784121-26784240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               232-368
               

               Cow position:
               chr28:13048163-13048298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               232-400
               

               Cow position:
               chr28:17601754-17601922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               141, 130
               

               Conread position:
               232-407
               

               Cow position:
               chr28:23007609-23007787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr28:33322580-33322400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               233-381
               

               Cow position:
               chr28:22133030-22132882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 25
               

               Conread position:
               233-402
               

               Cow position:
               chr28:34843455-34843623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               149, 82
               

               Conread position:
               233-407
               

               Cow position:
               chr28:2524062-2523887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               140, 54
               

               Conread position:
               233-407
               

               Cow position:
               chr28:24672385-24672211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               233-407
               

               Cow position:
               chr28:30865537-30865364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               140, 78
               

               Conread position:
               234-379
               

               Cow position:
               chr28:25763142-25762996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               234-403
               

               Cow position:
               chr28:6059351-6059520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               137
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-382
               

               Cow position:
               chr28:7156955-7156809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               235-387
               

               Cow position:
               chr28:26372855-26372708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               235-390
               

               Cow position:
               chr28:9294375-9294532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               137, 125
               

               Conread position:
               235-401
               

               Cow position:
               chr28:20397252-20397418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               136
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-402
               

               Cow position:
               chr28:3726091-3726262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               94, 104
               

               Conread position:
               235-407
               

               Cow position:
               chr28:4765794-4765622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               61, 138
               

               Conread position:
               235-407
               

               Cow position:
               chr28:7805304-7805478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               149, 120
               

               Conread position:
               235-407
               

               Cow position:
               chr28:13865957-13865789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               146, 44
               

               Conread position:
               236-383
               

               Cow position:
               chr28:26719460-26719314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               236-391
               

               Cow position:
               chr28:14512650-14512494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               237-406
               

               Cow position:
               chr28:22571552-22571719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               137, 102
               

               Conread position:
               237-407
               

               Cow position:
               chr28:8347847-8347678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               238-407
               

               Cow position:
               chr28:13176573-13176737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 74
               

               Conread position:
               242-426
               

               Cow position:
               chr28:4138560-4138738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr28:1838095-1837941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr28:32365953-32365789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               138
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               137, 10
               

               Conread position:
               246-386
               

               Cow position:
               chr28:19345357-19345216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 46
               

               Conread position:
               248-372
               

               Cow position:
               chr28:555609-555485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               248-406
               

               Cow position:
               chr28:25728299-25728147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               248-407
               

               Cow position:
               chr28:11786612-11786771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               79, 124
               

               Conread position:
               249-405
               

               Cow position:
               chr28:18625337-18625180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               137, 9
               

               Conread position:
               251-407
               

               Cow position:
               chr28:23676240-23676085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               255-369
               

               Cow position:
               chr28:23834503-23834389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr28:25283286-25283148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               271-390
               

               Cow position:
               chr28:21046494-21046615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               274-407
               

               Cow position:
               chr28:5827029-5826898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               81-403
               

               Cow position:
               chr29:10156044-10156361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               237
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               21, 100
               

               Conread position:
               83-176
               

               Cow position:
               chr29:4741171-4741265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               89-171
               

               Cow position:
               chr29:31835478-31835397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               75
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               89-239
               

               Cow position:
               chr29:2623265-2623418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               94-204
               

               Cow position:
               chr29:35832969-35832858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 86
               

               Conread position:
               94-285
               

               Cow position:
               chr29:8270694-8270513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 53
               

               Conread position:
               94-331
               

               Cow position:
               chr29:32302020-32301766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               94-336
               

               Cow position:
               chr29:17022387-17022160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               95-226
               

               Cow position:
               chr29:32766688-32766820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 111
               

               Conread position:
               96-331
               

               Cow position:
               chr29:26735574-26735339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               194, 80
               

               Conread position:
               96-350
               

               Cow position:
               chr29:28733905-28734140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               97-228
               

               Cow position:
               chr29:29176161-29176290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               89, 8
               

               Conread position:
               99-184
               

               Cow position:
               chr29:2720854-2720938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               78
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               99-216
               

               Cow position:
               chr29:2523384-2523266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               89, 6
               

               Conread position:
               100-441
               

               Cow position:
               chr29:24252467-24252145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               282, 70
               

               Conread position:
               101-337
               

               Cow position:
               chr29:11673407-11673171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               101-377
               

               Cow position:
               chr29:40298797-40299050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               101-407
               

               Cow position:
               chr29:31814177-31813888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               151, 66
               

               Conread position:
               105-226
               

               Cow position:
               chr29:22714515-22714633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               106-372
               

               Cow position:
               chr29:16365658-16365914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 57
               

               Conread position:
               106-388
               

               Cow position:
               chr29:683264-683531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               206, 64
               

               Conread position:
               108-228
               

               Cow position:
               chr29:11140061-11139947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               113-407
               

               Cow position:
               chr29:13866992-13867272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 54
               

               Conread position:
               154-330
               

               Cow position:
               chr29:19061587-19061758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               155-406
               

               Cow position:
               chr29:27873791-27873544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 29
               

               Conread position:
               164-372
               

               Cow position:
               chr29:31934561-31934353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               20, 7
               

               Conread position:
               167-347
               

               Cow position:
               chr29:42365330-42365509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               168-407
               

               Cow position:
               chr29:18403936-18404175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 140
               

               Conread position:
               169-380
               

               Cow position:
               chr29:5947626-5947837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               20, 123
               

               Conread position:
               170-400
               

               Cow position:
               chr29:847464-847696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               171-405
               

               Cow position:
               chr29:6293308-6293532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               172-407
               

               Cow position:
               chr29:749735-749970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               17, 6
               

               Conread position:
               172-407
               

               Cow position:
               chr29:26319340-26319115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 76
               

               Conread position:
               178-407
               

               Cow position:
               chr29:38581146-38580917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               28, 59
               

               Conread position:
               179-407
               

               Cow position:
               chr29:706788-707011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               179-407
               

               Cow position:
               chr29:22518959-22519190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               185-407
               

               Cow position:
               chr29:43496199-43495988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               186-404
               

               Cow position:
               chr29:8926302-8926522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               193, 17
               

               Conread position:
               187-337
               

               Cow position:
               chr29:28559542-28559389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 92
               

               Conread position:
               188-405
               

               Cow position:
               chr29:6844478-6844687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               130, 9
               

               Conread position:
               188-407
               

               Cow position:
               chr29:1325599-1325380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               8, 126
               

               Conread position:
               192-365
               

               Cow position:
               chr29:11527635-11527808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               14, 123
               

               Conread position:
               192-404
               

               Cow position:
               chr29:40097120-40096906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               14, 119
               

               Conread position:
               192-405
               

               Cow position:
               chr29:1022448-1022237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               192-407
               

               Cow position:
               chr29:2262846-2263057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               182, 14
               

               Conread position:
               194-353
               

               Cow position:
               chr29:16672642-16672484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               194-381
               

               Cow position:
               chr29:11042579-11042397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               195-398
               

               Cow position:
               chr29:42771785-42771596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               196-374
               

               Cow position:
               chr29:39329452-39329631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               196-407
               

               Cow position:
               chr29:22175830-22175627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               198-407
               

               Cow position:
               chr29:40959700-40959908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               199-399
               

               Cow position:
               chr29:11053709-11053911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               27, 123
               

               Conread position:
               199-407
               

               Cow position:
               chr29:6286015-6286218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               200-344
               

               Cow position:
               chr29:6870621-6870762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 6
               

               Conread position:
               200-407
               

               Cow position:
               chr29:5186348-5186557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               201-346
               

               Cow position:
               chr29:19059937-19060082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               5, 67
               

               Conread position:
               202-407
               

               Cow position:
               chr29:13639224-13639430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               116, 18
               

               Conread position:
               205-331
               

               Cow position:
               chr29:33393819-33393693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-406
               

               Cow position:
               chr29:28775324-28775518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               176, 15
               

               Conread position:
               205-407
               

               Cow position:
               chr29:5994955-5995161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               106, 46
               

               Conread position:
               206-326
               

               Cow position:
               chr29:26631181-26631061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr29:13028582-13028377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               18, 106
               

               Conread position:
               207-406
               

               Cow position:
               chr29:29314521-29314714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               167, 59
               

               Conread position:
               208-406
               

               Cow position:
               chr29:30681573-30681771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               183, 110
               

               Conread position:
               209-407
               

               Cow position:
               chr29:11397786-11397984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 157
               

               Conread position:
               209-407
               

               Cow position:
               chr29:28840295-28840093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               218-385
               

               Cow position:
               chr29:4070753-4070590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               5, 94
               

               Conread position:
               218-407
               

               Cow position:
               chr29:22778045-22778237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               5, 17
               

               Conread position:
               219-380
               

               Cow position:
               chr29:5520358-5520519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               29, 37
               

               Conread position:
               219-407
               

               Cow position:
               chr29:32926229-32926036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               154, 11
               

               Conread position:
               221-390
               

               Cow position:
               chr29:3685388-3685559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               221-407
               

               Cow position:
               chr29:41112756-41112935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               222-353
               

               Cow position:
               chr29:34760293-34760420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-363
               

               Cow position:
               chr29:19176783-19176930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               222-363
               

               Cow position:
               chr29:24051258-24051398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               222-365
               

               Cow position:
               chr29:38754812-38754958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               222-373
               

               Cow position:
               chr29:9310724-9310573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               81, 91
               

               Conread position:
               222-379
               

               Cow position:
               chr29:34687959-34687803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               222-381
               

               Cow position:
               chr29:18556796-18556638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-381
               

               Cow position:
               chr29:42883833-42883991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               222-385
               

               Cow position:
               chr29:5769919-5769756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               222-387
               

               Cow position:
               chr29:17110081-17109921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-391
               

               Cow position:
               chr29:7966371-7966201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               222-404
               

               Cow position:
               chr29:44378295-44378472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr29:12025352-12025529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               154, 57
               

               Conread position:
               222-406
               

               Cow position:
               chr29:30708499-30708680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               169, 102
               

               Conread position:
               222-407
               

               Cow position:
               chr29:11705237-11705063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 83
               

               Conread position:
               222-407
               

               Cow position:
               chr29:17409459-17409275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               152, 170
               

               Conread position:
               222-407
               

               Cow position:
               chr29:31929111-31928925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               154, 67
               

               Conread position:
               222-407
               

               Cow position:
               chr29:40583911-40583733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               222-407
               

               Cow position:
               chr29:41530973-41530787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               150
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               151, 34
               

               Conread position:
               223-373
               

               Cow position:
               chr29:28979380-28979526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               146, 17
               

               Conread position:
               223-379
               

               Cow position:
               chr29:17804657-17804502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               223-400
               

               Cow position:
               chr29:26017379-26017557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               122, 150
               

               Conread position:
               223-404
               

               Cow position:
               chr29:34744506-34744679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               223-405
               

               Cow position:
               chr29:17297259-17297076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr29:11647217-11647029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               151, 129
               

               Conread position:
               223-407
               

               Cow position:
               chr29:11915943-11915760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               149, 87
               

               Conread position:
               223-407
               

               Cow position:
               chr29:19762391-19762210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               150, 89
               

               Conread position:
               223-407
               

               Cow position:
               chr29:23698099-23697919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               223-441
               

               Cow position:
               chr29:31891409-31891622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               104, 33
               

               Conread position:
               224-387
               

               Cow position:
               chr29:27819339-27819179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               224-396
               

               Cow position:
               chr29:7310795-7310629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr29:13373423-13373239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               91, 151
               

               Conread position:
               224-407
               

               Cow position:
               chr29:29769230-29769411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               225-406
               

               Cow position:
               chr29:5210612-5210427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               154, 78
               

               Conread position:
               225-407
               

               Cow position:
               chr29:109803-109637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               226-318
               

               Cow position:
               chr29:30424679-30424771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               81
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr29:19428780-19428599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               226-407
               

               Cow position:
               chr29:22936391-22936210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               48, 107
               

               Conread position:
               227-407
               

               Cow position:
               chr29:16195959-16195782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               228-382
               

               Cow position:
               chr29:5789147-5788993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               15, 74
               

               Conread position:
               230-359
               

               Cow position:
               chr29:37046585-37046714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-347
               

               Cow position:
               chr29:18878366-18878482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-348
               

               Cow position:
               chr29:629653-629536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-352
               

               Cow position:
               chr29:19244343-19244465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               231-361
               

               Cow position:
               chr29:16200363-16200493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-364
               

               Cow position:
               chr29:935035-934907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               231-367
               

               Cow position:
               chr29:1220016-1220152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr29:36357241-36357103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               231-373
               

               Cow position:
               chr29:34359706-34359848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               133, 107
               

               Conread position:
               231-375
               

               Cow position:
               chr29:28420870-28420726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               129, 82
               

               Conread position:
               231-379
               

               Cow position:
               chr29:21645424-21645286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               231-381
               

               Cow position:
               chr29:16609863-16609713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-381
               

               Cow position:
               chr29:40791418-40791275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-382
               

               Cow position:
               chr29:396521-396378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-385
               

               Cow position:
               chr29:36220649-36220498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr29:25333346-25333501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               157, 77
               

               Conread position:
               231-402
               

               Cow position:
               chr29:27911705-27911537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               143, 56
               

               Conread position:
               231-402
               

               Cow position:
               chr29:27926888-27926720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               143, 58
               

               Conread position:
               231-405
               

               Cow position:
               chr29:15947282-15947109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr29:21443223-21443399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr29:27562878-27563050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr29:42630234-42630063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr29:4085423-4085259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr29:40117686-40117510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               145, 56
               

               Conread position:
               231-407
               

               Cow position:
               chr29:40633766-40633586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               24, 146
               

               Conread position:
               231-407
               

               Cow position:
               chr29:43251050-43251228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               32, 174
               

               Conread position:
               231-408
               

               Cow position:
               chr29:19756544-19756373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 46
               

               Conread position:
               231-408
               

               Cow position:
               chr29:29512026-29512201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               141, 25
               

               Conread position:
               231-426
               

               Cow position:
               chr29:35677428-35677619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               232-400
               

               Cow position:
               chr29:36217226-36217062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr29:9709809-9709635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               112, 147
               

               Conread position:
               232-407
               

               Cow position:
               chr29:23825787-23825608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr29:25475037-25474860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr29:28993976-28993800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 143
               

               Conread position:
               232-407
               

               Cow position:
               chr29:40994777-40994950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               233-380
               

               Cow position:
               chr29:24187952-24188099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-385
               

               Cow position:
               chr29:38858102-38858252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               233-396
               

               Cow position:
               chr29:42886656-42886495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               233-405
               

               Cow position:
               chr29:16290840-16290666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               233-406
               

               Cow position:
               chr29:12310121-12309950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr29:2056174-2055998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               141, 162
               

               Conread position:
               233-407
               

               Cow position:
               chr29:30227169-30227333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr29:38347916-38348091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               233-423
               

               Cow position:
               chr29:43544490-43544679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 106
               

               Conread position:
               233-426
               

               Cow position:
               chr29:4120967-4120768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr29:8004815-8004983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               235-373
               

               Cow position:
               chr29:4423328-4423466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-379
               

               Cow position:
               chr29:31981942-31981797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               235-380
               

               Cow position:
               chr29:25088854-25088712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               235-405
               

               Cow position:
               chr29:18021572-18021739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               137, 96
               

               Conread position:
               235-406
               

               Cow position:
               chr29:9912286-9912113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               137, 24
               

               Conread position:
               235-406
               

               Cow position:
               chr29:27858898-27858733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               136, 77
               

               Conread position:
               235-407
               

               Cow position:
               chr29:356433-356259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr29:6015237-6015062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr29:8862370-8862538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               94, 72
               

               Conread position:
               235-407
               

               Cow position:
               chr29:10235026-10235193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               138, 16
               

               Conread position:
               235-407
               

               Cow position:
               chr29:10653443-10653281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr29:13127009-13127182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               59, 136
               

               Conread position:
               235-407
               

               Cow position:
               chr29:28195410-28195573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr29:29057286-29057119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               236-372
               

               Cow position:
               chr29:35259095-35258959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-385
               

               Cow position:
               chr29:31200368-31200220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               236-406
               

               Cow position:
               chr29:5409032-5409199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               146, 22
               

               Conread position:
               236-407
               

               Cow position:
               chr29:7103669-7103495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               237-329
               

               Cow position:
               chr29:43088417-43088328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               80
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               237-407
               

               Cow position:
               chr29:463543-463718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               238-406
               

               Cow position:
               chr29:1229715-1229546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               135, 114
               

               Conread position:
               238-407
               

               Cow position:
               chr29:35292201-35292028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               242-405
               

               Cow position:
               chr29:40853032-40852871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               242-407
               

               Cow position:
               chr29:4520438-4520275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               130, 8
               

               Conread position:
               242-407
               

               Cow position:
               chr29:17222518-17222353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 151
               

               Conread position:
               242-407
               

               Cow position:
               chr29:44008681-44008841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               138, 54
               

               Conread position:
               243-347
               

               Cow position:
               chr29:8634757-8634653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-390
               

               Cow position:
               chr29:30918652-30918503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               243-405
               

               Cow position:
               chr29:12625873-12626037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr29:11434222-11434062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               243-445
               

               Cow position:
               chr29:17154881-17154670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               128, 71
               

               Conread position:
               244-388
               

               Cow position:
               chr29:8686432-8686287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               244-405
               

               Cow position:
               chr29:36632758-36632920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               99, 150
               

               Conread position:
               244-407
               

               Cow position:
               chr29:19821385-19821227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr29:32290711-32290548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-345
               

               Cow position:
               chr29:39285596-39285496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               245-406
               

               Cow position:
               chr29:28868744-28868576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               245-407
               

               Cow position:
               chr29:6337768-6337601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               247-376
               

               Cow position:
               chr29:12680255-12680126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               247-406
               

               Cow position:
               chr29:9638222-9638376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr29:16309840-16309682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               127, 27
               

               Conread position:
               251-391
               

               Cow position:
               chr29:19558924-19559066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               251-404
               

               Cow position:
               chr29:23983860-23984015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               129, 144
               

               Conread position:
               251-407
               

               Cow position:
               chr29:30350836-30350995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               254-407
               

               Cow position:
               chr29:27668568-27668723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               256-406
               

               Cow position:
               chr29:41365199-41365053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               257-407
               

               Cow position:
               chr29:868864-868715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               258-407
               

               Cow position:
               chr29:36830446-36830299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               262-406
               

               Cow position:
               chr29:31651496-31651353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 117
               

               Conread position:
               265-401
               

               Cow position:
               chr29:30713628-30713764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 115
               

               Conread position:
               266-418
               

               Cow position:
               chr29:30827486-30827334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               268-406
               

               Cow position:
               chr29:17034-17170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               104, 21
               

               Conread position:
               272-407
               

               Cow position:
               chr29:13487023-13486889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               100, 7
               

               Conread position:
               274-407
               

               Cow position:
               chr29:17131546-17131679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               19, 105
               

               Conread position:
               282-407
               

               Cow position:
               chr29:2071507-2071633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 105
               

               Conread position:
               315-409
               

               Cow position:
               chr29:5445687-5445784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               82-181
               

               Cow position:
               chr3:58527571-58527474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               87-309
               

               Cow position:
               chr3:44243740-44243535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               87-376
               

               Cow position:
               chr3:57877790-57877514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               88-176
               

               Cow position:
               chr3:40212846-40212934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               77
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               88-385
               

               Cow position:
               chr3:28258335-28258034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               37, 53
               

               Conread position:
               88-407
               

               Cow position:
               chr3:1785035-1785326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               89-234
               

               Cow position:
               chr3:75151198-75151340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               97, 89
               

               Conread position:
               89-407
               

               Cow position:
               chr3:26230339-26230014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               99, 39
               

               Conread position:
               90-239
               

               Cow position:
               chr3:74044540-74044386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 90
               

               Conread position:
               90-310
               

               Cow position:
               chr3:18426827-18427048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               90-375
               

               Cow position:
               chr3:53508830-53508559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               8, 89
               

               Conread position:
               90-405
               

               Cow position:
               chr3:10104253-10103966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               90-407
               

               Cow position:
               chr3:15173328-15172995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               42, 319
               

               Conread position:
               92-222
               

               Cow position:
               chr3:33330021-33329892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               92-407
               

               Cow position:
               chr3:59621423-59621729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 80
               

               Conread position:
               93-382
               

               Cow position:
               chr3:59692107-59691830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               94-206
               

               Cow position:
               chr3:21081197-21081306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               92, 39
               

               Conread position:
               94-226
               

               Cow position:
               chr3:23443952-23444086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               92, 84
               

               Conread position:
               94-232
               

               Cow position:
               chr3:39909474-39909615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               94-345
               

               Cow position:
               chr3:15682914-15683171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 72
               

               Conread position:
               94-346
               

               Cow position:
               chr3:78201830-78201588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 33
               

               Conread position:
               94-347
               

               Cow position:
               chr3:26973210-26973460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               128, 24
               

               Conread position:
               94-356
               

               Cow position:
               chr3:24372139-24371890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 66
               

               Conread position:
               94-378
               

               Cow position:
               chr3:75971591-75971876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               102, 84
               

               Conread position:
               94-400
               

               Cow position:
               chr3:81470881-81471172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               94-407
               

               Cow position:
               chr3:57624691-57624382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 80
               

               Conread position:
               94-407
               

               Cow position:
               chr3:61279120-61278833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               95-225
               

               Cow position:
               chr3:75183500-75183376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               95-303
               

               Cow position:
               chr3:62622972-62623175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               61, 84
               

               Conread position:
               95-346
               

               Cow position:
               chr3:28937402-28937627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               95-354
               

               Cow position:
               chr3:28555939-28556194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 76
               

               Conread position:
               95-383
               

               Cow position:
               chr3:64372913-64373217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               95-405
               

               Cow position:
               chr3:14625938-14626237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               156, 27
               

               Conread position:
               95-407
               

               Cow position:
               chr3:55271815-55272129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               99, 12
               

               Conread position:
               96-339
               

               Cow position:
               chr3:2179332-2179103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               237, 44
               

               Conread position:
               96-390
               

               Cow position:
               chr3:63177701-63177418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               150, 14
               

               Conread position:
               96-432
               

               Cow position:
               chr3:7428216-7427893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               278, 75
               

               Conread position:
               97-171
               

               Cow position:
               chr3:59681727-59681801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               75
               

               Alignm identity:
               70
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-342
               

               Cow position:
               chr3:61133846-61133621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               97-350
               

               Cow position:
               chr3:58432228-58432471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               150, 57
               

               Conread position:
               97-397
               

               Cow position:
               chr3:73442878-73443162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               276, 8
               

               Conread position:
               98-327
               

               Cow position:
               chr3:53256737-53256525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               99-194
               

               Cow position:
               chr3:18393222-18393317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 81
               

               Conread position:
               99-195
               

               Cow position:
               chr3:25702153-25702247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               99-216
               

               Cow position:
               chr3:49232061-49231943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 8
               

               Conread position:
               99-239
               

               Cow position:
               chr3:44839077-44839212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               99-316
               

               Cow position:
               chr3:57038097-57038316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               41, 86
               

               Conread position:
               99-407
               

               Cow position:
               chr3:44330229-44330521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               101-222
               

               Cow position:
               chr3:49731317-49731443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               101-331
               

               Cow position:
               chr3:83504412-83504188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               7, 70
               

               Conread position:
               102-372
               

               Cow position:
               chr3:59209001-59208756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               102-404
               

               Cow position:
               chr3:17447405-17447691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               265, 77
               

               Conread position:
               105-328
               

               Cow position:
               chr3:27670645-27670409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               106-304
               

               Cow position:
               chr3:21340606-21340793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               106-324
               

               Cow position:
               chr3:16177043-16177247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               106-337
               

               Cow position:
               chr3:35285264-35285030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 105
               

               Conread position:
               106-349
               

               Cow position:
               chr3:25692233-25692004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               106-372
               

               Cow position:
               chr3:58940334-58940078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               106-407
               

               Cow position:
               chr3:31850164-31850455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               120, 64
               

               Conread position:
               106-407
               

               Cow position:
               chr3:46901409-46901115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 92
               

               Conread position:
               116-333
               

               Cow position:
               chr3:68620719-68620932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 74
               

               Conread position:
               116-339
               

               Cow position:
               chr3:52634306-52634093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               116-379
               

               Cow position:
               chr3:82629515-82629262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               116-381
               

               Cow position:
               chr3:11606523-11606257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 84
               

               Conread position:
               117-406
               

               Cow position:
               chr3:84175639-84175907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               256, 46
               

               Conread position:
               139-407
               

               Cow position:
               chr3:17934764-17935022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 39
               

               Conread position:
               140-381
               

               Cow position:
               chr3:48810456-48810701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               11, 236
               

               Conread position:
               156-407
               

               Cow position:
               chr3:12711746-12712000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 77
               

               Conread position:
               157-407
               

               Cow position:
               chr3:17235054-17235292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 5
               

               Conread position:
               159-396
               

               Cow position:
               chr3:63180022-63179786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               27, 68
               

               Conread position:
               161-406
               

               Cow position:
               chr3:26921069-26920826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               162-426
               

               Cow position:
               chr3:66883786-66884042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               165-373
               

               Cow position:
               chr3:8901793-8901581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               23, 150
               

               Conread position:
               168-380
               

               Cow position:
               chr3:20515665-20515875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               202, 31
               

               Conread position:
               170-407
               

               Cow position:
               chr3:28908052-28908286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               211, 20
               

               Conread position:
               171-310
               

               Cow position:
               chr3:70264065-70264197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               171-407
               

               Cow position:
               chr3:58764923-58765161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 19
               

               Conread position:
               173-338
               

               Cow position:
               chr3:35582995-35582827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 166
               

               Conread position:
               174-387
               

               Cow position:
               chr3:11292102-11292313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               196, 24
               

               Conread position:
               176-370
               

               Cow position:
               chr3:19793055-19792859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               44, 106
               

               Conread position:
               177-387
               

               Cow position:
               chr3:36914202-36913988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               182-407
               

               Cow position:
               chr3:23471314-23471549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               185-407
               

               Cow position:
               chr3:58767400-58767177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               188, 45
               

               Conread position:
               187-408
               

               Cow position:
               chr3:35621438-35621219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               188-358
               

               Cow position:
               chr3:11705389-11705217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               188-406
               

               Cow position:
               chr3:70900026-70899813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               190-407
               

               Cow position:
               chr3:35852339-35852557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               194-396
               

               Cow position:
               chr3:63657732-63657935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               126, 12
               

               Conread position:
               194-406
               

               Cow position:
               chr3:5100639-5100848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               11, 179
               

               Conread position:
               194-407
               

               Cow position:
               chr3:38691273-38691489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               12, 182
               

               Conread position:
               194-407
               

               Cow position:
               chr3:53240384-53240180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 12
               

               Conread position:
               194-407
               

               Cow position:
               chr3:55984223-55984012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               186, 14
               

               Conread position:
               194-407
               

               Cow position:
               chr3:78945712-78945917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               195-345
               

               Cow position:
               chr3:1533975-1534126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               195-386
               

               Cow position:
               chr3:21997656-21997851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-407
               

               Cow position:
               chr3:57764347-57764145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               196-370
               

               Cow position:
               chr3:59920151-59919986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               196-405
               

               Cow position:
               chr3:70402023-70401821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               197-407
               

               Cow position:
               chr3:54100604-54100803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               198-349
               

               Cow position:
               chr3:23265210-23265360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 8
               

               Conread position:
               201-372
               

               Cow position:
               chr3:77589641-77589471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 130
               

               Conread position:
               204-406
               

               Cow position:
               chr3:11987450-11987247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               205-362
               

               Cow position:
               chr3:8813993-8814150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               21, 151
               

               Conread position:
               205-391
               

               Cow position:
               chr3:56704202-56704388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               206-329
               

               Cow position:
               chr3:4086747-4086869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               206-406
               

               Cow position:
               chr3:21081268-21081457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               206-406
               

               Cow position:
               chr3:66900617-66900818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               207-407
               

               Cow position:
               chr3:5365794-5365595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               208-365
               

               Cow position:
               chr3:5305917-5305757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               208-407
               

               Cow position:
               chr3:72503779-72503981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               209-407
               

               Cow position:
               chr3:58540407-58540609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               124, 90
               

               Conread position:
               210-370
               

               Cow position:
               chr3:74644669-74644511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               133, 21
               

               Conread position:
               210-388
               

               Cow position:
               chr3:16752145-16752323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               157, 101
               

               Conread position:
               214-353
               

               Cow position:
               chr3:20021380-20021240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               214-407
               

               Cow position:
               chr3:71497027-71497226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               158
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               215-396
               

               Cow position:
               chr3:35074988-35074811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 133
               

               Conread position:
               215-405
               

               Cow position:
               chr3:53113284-53113093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 43
               

               Conread position:
               215-406
               

               Cow position:
               chr3:56476791-56476597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               215-406
               

               Cow position:
               chr3:64280822-64281013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               116, 38
               

               Conread position:
               215-407
               

               Cow position:
               chr3:59000647-59000834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               216-359
               

               Cow position:
               chr3:28902652-28902794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               216-371
               

               Cow position:
               chr3:82165453-82165615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               216-387
               

               Cow position:
               chr3:65237133-65236959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-406
               

               Cow position:
               chr3:48477929-48478114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               162, 7
               

               Conread position:
               216-407
               

               Cow position:
               chr3:22221436-22221237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               7, 96
               

               Conread position:
               216-407
               

               Cow position:
               chr3:46005914-46006097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               216-407
               

               Cow position:
               chr3:52651970-52652164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               7, 173
               

               Conread position:
               216-407
               

               Cow position:
               chr3:71474297-71474491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               158, 28
               

               Conread position:
               218-405
               

               Cow position:
               chr3:55094124-55094314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 7
               

               Conread position:
               219-376
               

               Cow position:
               chr3:74787532-74787379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               219-390
               

               Cow position:
               chr3:20841771-20841938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               219-407
               

               Cow position:
               chr3:2675135-2674946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               219-407
               

               Cow position:
               chr3:65019763-65019948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               219-407
               

               Cow position:
               chr3:75045771-75045959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               56, 95
               

               Conread position:
               219-426
               

               Cow position:
               chr3:53384175-53384378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 39
               

               Conread position:
               221-383
               

               Cow position:
               chr3:18459424-18459587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 142
               

               Conread position:
               221-385
               

               Cow position:
               chr3:23753594-23753437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               221-407
               

               Cow position:
               chr3:3889467-3889653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               222-345
               

               Cow position:
               chr3:70402745-70402623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               222-347
               

               Cow position:
               chr3:47199025-47199150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               222-348
               

               Cow position:
               chr3:75966679-75966805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               41, 93
               

               Conread position:
               222-358
               

               Cow position:
               chr3:46559615-46559749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               222-364
               

               Cow position:
               chr3:41863727-41863584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               222-366
               

               Cow position:
               chr3:54905717-54905576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               14, 91
               

               Conread position:
               222-369
               

               Cow position:
               chr3:52457013-52456873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               222-369
               

               Cow position:
               chr3:59828291-59828438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-371
               

               Cow position:
               chr3:5703275-5703131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               222-372
               

               Cow position:
               chr3:60265152-60265299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               222-381
               

               Cow position:
               chr3:71423453-71423608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-382
               

               Cow position:
               chr3:64648594-64648433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               222-385
               

               Cow position:
               chr3:69650787-69650947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-386
               

               Cow position:
               chr3:56948986-56949148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-387
               

               Cow position:
               chr3:48900231-48900394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               222-388
               

               Cow position:
               chr3:2025302-2025134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               222-388
               

               Cow position:
               chr3:68130188-68130348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 44
               

               Conread position:
               222-390
               

               Cow position:
               chr3:2638028-2637862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-390
               

               Cow position:
               chr3:61467089-61467259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               151, 13
               

               Conread position:
               222-391
               

               Cow position:
               chr3:77365188-77365358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               222-396
               

               Cow position:
               chr3:8733259-8733424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               222-401
               

               Cow position:
               chr3:61144196-61144023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-404
               

               Cow position:
               chr3:82056017-82056188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               222-405
               

               Cow position:
               chr3:18059805-18059620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               222-405
               

               Cow position:
               chr3:36160091-36160276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               222-405
               

               Cow position:
               chr3:37041520-37041334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               160, 13
               

               Conread position:
               222-405
               

               Cow position:
               chr3:53592587-53592774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               222-405
               

               Cow position:
               chr3:70334593-70334775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr3:59474225-59474038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr3:77271177-77271355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:2392866-2393045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               68, 90
               

               Conread position:
               222-407
               

               Cow position:
               chr3:2506377-2506558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               118, 59
               

               Conread position:
               222-407
               

               Cow position:
               chr3:4319810-4319629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:14552977-14552794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:17222037-17222228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:22165314-22165500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               152, 89
               

               Conread position:
               222-407
               

               Cow position:
               chr3:23408256-23408434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:24935466-24935288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 31
               

               Conread position:
               222-407
               

               Cow position:
               chr3:29813334-29813162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               22, 91
               

               Conread position:
               222-407
               

               Cow position:
               chr3:31225534-31225356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:43727173-43726994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               222-407
               

               Cow position:
               chr3:53150433-53150246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               101, 160
               

               Conread position:
               222-407
               

               Cow position:
               chr3:58317846-58318036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:58527484-58527311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:59597280-59597101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:59883966-59884154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:60264614-60264800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:65058799-65058619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:67704648-67704460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:67930083-67930265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               21, 66
               

               Conread position:
               222-407
               

               Cow position:
               chr3:74900541-74900721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:76267873-76268061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr3:77582207-77582027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               222-407
               

               Cow position:
               chr3:83215364-83215177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               222-408
               

               Cow position:
               chr3:33693921-33693734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               175, 141
               

               Conread position:
               222-421
               

               Cow position:
               chr3:23203130-23203332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               158, 56
               

               Conread position:
               222-434
               

               Cow position:
               chr3:84250442-84250654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               156, 98
               

               Conread position:
               223-332
               

               Cow position:
               chr3:2016536-2016427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-346
               

               Cow position:
               chr3:4271473-4271350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-350
               

               Cow position:
               chr3:76056184-76056311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-359
               

               Cow position:
               chr3:18831526-18831386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-369
               

               Cow position:
               chr3:82366229-82366084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               57, 93
               

               Conread position:
               223-376
               

               Cow position:
               chr3:11281867-11281713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               223-376
               

               Cow position:
               chr3:38783707-38783554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-378
               

               Cow position:
               chr3:49996619-49996777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               223-380
               

               Cow position:
               chr3:21642088-21641931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               151, 95
               

               Conread position:
               223-380
               

               Cow position:
               chr3:73299180-73299025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               24, 90
               

               Conread position:
               223-381
               

               Cow position:
               chr3:2648410-2648566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               223-381
               

               Cow position:
               chr3:15153792-15153634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-386
               

               Cow position:
               chr3:55712541-55712378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-388
               

               Cow position:
               chr3:13380174-13380340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               223-388
               

               Cow position:
               chr3:31309253-31309417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-390
               

               Cow position:
               chr3:54067895-54067731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               223-390
               

               Cow position:
               chr3:83889347-83889180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-396
               

               Cow position:
               chr3:28735412-28735585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               89, 51
               

               Conread position:
               223-400
               

               Cow position:
               chr3:15160621-15160450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               223-403
               

               Cow position:
               chr3:73709147-73708969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               223-405
               

               Cow position:
               chr3:30180187-30180001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               127, 152
               

               Conread position:
               223-406
               

               Cow position:
               chr3:71238254-71238075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 47
               

               Conread position:
               223-407
               

               Cow position:
               chr3:15443628-15443812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               148, 108
               

               Conread position:
               223-407
               

               Cow position:
               chr3:18067233-18067053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               158, 89
               

               Conread position:
               223-407
               

               Cow position:
               chr3:45881999-45881821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr3:48363173-48362994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr3:54739786-54739971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               100, 71
               

               Conread position:
               223-407
               

               Cow position:
               chr3:72342346-72342162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               170, 151
               

               Conread position:
               223-407
               

               Cow position:
               chr3:75238558-75238375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr3:75777959-75778144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               20, 157
               

               Conread position:
               223-408
               

               Cow position:
               chr3:69785520-69785710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 152
               

               Conread position:
               224-370
               

               Cow position:
               chr3:46305554-46305420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               224-377
               

               Cow position:
               chr3:53904553-53904405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               224-404
               

               Cow position:
               chr3:8393445-8393270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               165, 52
               

               Conread position:
               224-407
               

               Cow position:
               chr3:9663072-9663254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               224-407
               

               Cow position:
               chr3:11640833-11640645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr3:79645330-79645523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               224-408
               

               Cow position:
               chr3:65413177-65413363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               150
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               23, 164
               

               Conread position:
               224-455
               

               Cow position:
               chr3:73461066-73460832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               162, 63
               

               Conread position:
               225-407
               

               Cow position:
               chr3:54946230-54946046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               142, 170
               

               Conread position:
               226-383
               

               Cow position:
               chr3:52419036-52418881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 88
               

               Conread position:
               226-388
               

               Cow position:
               chr3:15192678-15192522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 87
               

               Conread position:
               228-376
               

               Cow position:
               chr3:76024599-76024455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               94, 16
               

               Conread position:
               228-386
               

               Cow position:
               chr3:46792481-46792321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               228-400
               

               Cow position:
               chr3:8061221-8061050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               151, 7
               

               Conread position:
               230-401
               

               Cow position:
               chr3:58973389-58973217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               142, 23
               

               Conread position:
               230-407
               

               Cow position:
               chr3:53270924-53270747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               150, 139
               

               Conread position:
               230-407
               

               Cow position:
               chr3:83491179-83491004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               231-332
               

               Cow position:
               chr3:62186244-62186143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-341
               

               Cow position:
               chr3:25037902-25038009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               231-345
               

               Cow position:
               chr3:61023930-61024044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-348
               

               Cow position:
               chr3:40199202-40199319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-362
               

               Cow position:
               chr3:84137722-84137853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-370
               

               Cow position:
               chr3:67959829-67959962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr3:40212941-40213081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               231-376
               

               Cow position:
               chr3:15237604-15237742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               102, 50
               

               Conread position:
               231-377
               

               Cow position:
               chr3:10026598-10026738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               231-381
               

               Cow position:
               chr3:45211394-45211245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-383
               

               Cow position:
               chr3:42423235-42423386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-384
               

               Cow position:
               chr3:81234482-81234329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-387
               

               Cow position:
               chr3:68004609-68004763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr3:2484097-2483936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr3:39247929-39248089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               65, 142
               

               Conread position:
               231-391
               

               Cow position:
               chr3:79271618-79271781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               231-400
               

               Cow position:
               chr3:75050525-75050697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               140, 69
               

               Conread position:
               231-402
               

               Cow position:
               chr3:3738574-3738410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               231-402
               

               Cow position:
               chr3:78092419-78092591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               156, 37
               

               Conread position:
               231-403
               

               Cow position:
               chr3:23667713-23667544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               91, 19
               

               Conread position:
               231-403
               

               Cow position:
               chr3:32585243-32585074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               231-403
               

               Cow position:
               chr3:74134797-74134621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr3:210412-210236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr3:3032501-3032324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               231-406
               

               Cow position:
               chr3:29360058-29360227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr3:68587114-68586939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               142, 25
               

               Conread position:
               231-407
               

               Cow position:
               chr3:3656608-3656431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               21, 145
               

               Conread position:
               231-407
               

               Cow position:
               chr3:4050286-4050112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               143, 114
               

               Conread position:
               231-407
               

               Cow position:
               chr3:7337691-7337866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               146, 58
               

               Conread position:
               231-407
               

               Cow position:
               chr3:8394036-8393854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr3:14465614-14465795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               141, 26
               

               Conread position:
               231-407
               

               Cow position:
               chr3:14601611-14601794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr3:15051860-15052034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               231-407
               

               Cow position:
               chr3:17058453-17058623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr3:34271007-34270833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               43, 79
               

               Conread position:
               231-407
               

               Cow position:
               chr3:34871658-34871482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               150, 51
               

               Conread position:
               231-407
               

               Cow position:
               chr3:36375447-36375624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr3:52608275-52608097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr3:52863090-52863266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               25, 148
               

               Conread position:
               231-407
               

               Cow position:
               chr3:53046570-53046745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               151
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               143, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr3:53703871-53704049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               139, 22
               

               Conread position:
               231-407
               

               Cow position:
               chr3:57760591-57760417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr3:59451697-59451507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr3:60597635-60597459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               24, 82
               

               Conread position:
               231-407
               

               Cow position:
               chr3:61323424-61323249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 125
               

               Conread position:
               231-407
               

               Cow position:
               chr3:83988625-83988448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               139, 58
               

               Conread position:
               232-344
               

               Cow position:
               chr3:41366618-41366730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-351
               

               Cow position:
               chr3:22092241-22092122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-358
               

               Cow position:
               chr3:44960034-44959908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-376
               

               Cow position:
               chr3:3556637-3556493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-384
               

               Cow position:
               chr3:24596331-24596480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               232-396
               

               Cow position:
               chr3:19793499-19793664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               149, 54
               

               Conread position:
               232-396
               

               Cow position:
               chr3:48252977-48252811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               232-404
               

               Cow position:
               chr3:27976432-27976606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               232-405
               

               Cow position:
               chr3:27940051-27940218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               232-406
               

               Cow position:
               chr3:1517420-1517594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               232-406
               

               Cow position:
               chr3:51033458-51033285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               170, 146
               

               Conread position:
               232-407
               

               Cow position:
               chr3:3818874-3818712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               138, 47
               

               Conread position:
               232-407
               

               Cow position:
               chr3:35153709-35153533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr3:37599336-37599509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr3:55970598-55970424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               142, 24
               

               Conread position:
               232-407
               

               Cow position:
               chr3:63269314-63269140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               149, 21
               

               Conread position:
               232-407
               

               Cow position:
               chr3:65969259-65969079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr3:83474837-83474659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               232-408
               

               Cow position:
               chr3:66014401-66014234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               142, 88
               

               Conread position:
               232-432
               

               Cow position:
               chr3:59702260-59702067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               232-441
               

               Cow position:
               chr3:73820279-73820485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               141, 12
               

               Conread position:
               233-356
               

               Cow position:
               chr3:48483269-48483146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-389
               

               Cow position:
               chr3:17134425-17134270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               233-401
               

               Cow position:
               chr3:14547091-14546924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               141, 39
               

               Conread position:
               233-407
               

               Cow position:
               chr3:3649133-3649300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr3:15228732-15228903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr3:24468294-24468461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr3:56943512-56943691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               233-407
               

               Cow position:
               chr3:75687347-75687520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               140, 23
               

               Conread position:
               233-447
               

               Cow position:
               chr3:28898131-28898343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               5, 139
               

               Conread position:
               234-341
               

               Cow position:
               chr3:54557764-54557657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               234-400
               

               Cow position:
               chr3:55085079-55085249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               234-404
               

               Cow position:
               chr3:80581745-80581585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               235-348
               

               Cow position:
               chr3:27246870-27246983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-373
               

               Cow position:
               chr3:11229276-11229414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-377
               

               Cow position:
               chr3:5249293-5249430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               235-393
               

               Cow position:
               chr3:60389854-60389697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               8, 137
               

               Conread position:
               235-397
               

               Cow position:
               chr3:27727742-27727905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               134, 87
               

               Conread position:
               235-402
               

               Cow position:
               chr3:5366857-5366693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               235-404
               

               Cow position:
               chr3:56483608-56483432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               235-405
               

               Cow position:
               chr3:20993902-20993730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               137, 120
               

               Conread position:
               235-407
               

               Cow position:
               chr3:18686995-18686825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr3:18725555-18725722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr3:26904199-26904028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               235-407
               

               Cow position:
               chr3:45648219-45648050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               139, 74
               

               Conread position:
               235-407
               

               Cow position:
               chr3:50614730-50614555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr3:51234007-51234178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               158, 97
               

               Conread position:
               235-407
               

               Cow position:
               chr3:55010076-55010246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               144, 103
               

               Conread position:
               235-407
               

               Cow position:
               chr3:55318810-55318985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               235-407
               

               Cow position:
               chr3:59588599-59588437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr3:73764111-73764277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr3:74846620-74846794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               133, 147
               

               Conread position:
               235-421
               

               Cow position:
               chr3:23804594-23804419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               174, 77
               

               Conread position:
               236-352
               

               Cow position:
               chr3:4120278-4120394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-400
               

               Cow position:
               chr3:16254753-16254905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr3:3985410-3985245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr3:12978529-12978698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 21
               

               Conread position:
               236-407
               

               Cow position:
               chr3:51578238-51578403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               237-341
               

               Cow position:
               chr3:81065368-81065267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               237-372
               

               Cow position:
               chr3:15751627-15751760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               237-376
               

               Cow position:
               chr3:909546-909685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               237-406
               

               Cow position:
               chr3:17895935-17895761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               73, 38
               

               Conread position:
               237-406
               

               Cow position:
               chr3:75570366-75570532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               10, 41
               

               Conread position:
               237-407
               

               Cow position:
               chr3:71231482-71231316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               238-404
               

               Cow position:
               chr3:38347276-38347114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               238-405
               

               Cow position:
               chr3:34669647-34669807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               238-407
               

               Cow position:
               chr3:59101913-59101747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               134, 72
               

               Conread position:
               238-407
               

               Cow position:
               chr3:59630427-59630584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               240-373
               

               Cow position:
               chr3:82386653-82386778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               242-371
               

               Cow position:
               chr3:74502243-74502372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               242-378
               

               Cow position:
               chr3:36656726-36656856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               243-361
               

               Cow position:
               chr3:26982138-26982021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               243-376
               

               Cow position:
               chr3:39988160-39988287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               243-406
               

               Cow position:
               chr3:53739104-53739267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               139, 128
               

               Conread position:
               243-407
               

               Cow position:
               chr3:5097288-5097124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               134
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr3:5374409-5374250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr3:26553631-26553796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 111
               

               Conread position:
               244-407
               

               Cow position:
               chr3:46541749-46541910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr3:72676171-72676010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr3:79292908-79292747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               245-407
               

               Cow position:
               chr3:3472119-3471955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               143, 110
               

               Conread position:
               245-407
               

               Cow position:
               chr3:80468599-80468758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               245-441
               

               Cow position:
               chr3:58968824-58969015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               164, 121
               

               Conread position:
               246-407
               

               Cow position:
               chr3:81277390-81277553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               124, 149
               

               Conread position:
               248-407
               

               Cow position:
               chr3:27545744-27545904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               126, 6
               

               Conread position:
               251-407
               

               Cow position:
               chr3:3638251-3638105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               251-407
               

               Cow position:
               chr3:71238542-71238391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 62
               

               Conread position:
               253-383
               

               Cow position:
               chr3:5040237-5040365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               256-407
               

               Cow position:
               chr3:20437588-20437734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               257-407
               

               Cow position:
               chr3:78896714-78896565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               261-386
               

               Cow position:
               chr3:22871780-22871902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               261-390
               

               Cow position:
               chr3:73759454-73759581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               265-403
               

               Cow position:
               chr3:45222092-45222234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               266-407
               

               Cow position:
               chr3:39661399-39661538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               266-446
               

               Cow position:
               chr3:34937902-34937723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               267-407
               

               Cow position:
               chr3:66609787-66609925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               113, 65
               

               Conread position:
               271-407
               

               Cow position:
               chr3:74878536-74878671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               273-407
               

               Cow position:
               chr3:32183966-32184103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               275-407
               

               Cow position:
               chr3:67929211-67929343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               111, 91
               

               Conread position:
               289-411
               

               Cow position:
               chr3:70632056-70631926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               291-447
               

               Cow position:
               chr3:43528199-43528364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 148
               

               Conread position:
               81-225
               

               Cow position:
               chr4:49794861-49794718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               119, 25
               

               Conread position:
               81-369
               

               Cow position:
               chr4:3397210-3396944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 51
               

               Conread position:
               82-368
               

               Cow position:
               chr4:54854551-54854832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               20, 72
               

               Conread position:
               84-182
               

               Cow position:
               chr4:45909749-45909848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 97
               

               Conread position:
               85-183
               

               Cow position:
               chr4:22073109-22073208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               85-379
               

               Cow position:
               chr4:33433001-33433293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               85-407
               

               Cow position:
               chr4:45367979-45367670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 54
               

               Conread position:
               86-176
               

               Cow position:
               chr4:43709949-43710039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               78
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               86-183
               

               Cow position:
               chr4:47451685-47451587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               86-183
               

               Cow position:
               chr4:53347774-53347868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               86-203
               

               Cow position:
               chr4:13393859-13393741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 94
               

               Conread position:
               86-216
               

               Cow position:
               chr4:13211453-13211321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 94
               

               Conread position:
               86-296
               

               Cow position:
               chr4:59337518-59337323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               21, 94
               

               Conread position:
               86-318
               

               Cow position:
               chr4:69398624-69398843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               22, 31
               

               Conread position:
               87-407
               

               Cow position:
               chr4:65649872-65650195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 251
               

               Conread position:
               89-344
               

               Cow position:
               chr4:14761207-14760968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               156, 68
               

               Conread position:
               90-335
               

               Cow position:
               chr4:7729189-7729430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               99, 16
               

               Conread position:
               91-407
               

               Cow position:
               chr4:45012952-45013230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               93-181
               

               Cow position:
               chr4:43865631-43865718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               77
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               93-407
               

               Cow position:
               chr4:11380525-11380218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               77, 88
               

               Conread position:
               94-174
               

               Cow position:
               chr4:5637584-5637504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               81
               

               Alignm identity:
               73
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-208
               

               Cow position:
               chr4:4516671-4516780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               94-289
               

               Cow position:
               chr4:37845189-37845367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               94-335
               

               Cow position:
               chr4:46708149-46708365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               94-346
               

               Cow position:
               chr4:13520634-13520881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 97
               

               Conread position:
               94-391
               

               Cow position:
               chr4:8947624-8947348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 79
               

               Conread position:
               94-400
               

               Cow position:
               chr4:45644086-45644369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               94-407
               

               Cow position:
               chr4:21174084-21173782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               85, 110
               

               Conread position:
               94-407
               

               Cow position:
               chr4:47349062-47348761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 75
               

               Conread position:
               95-345
               

               Cow position:
               chr4:38886858-38887115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               74, 138
               

               Conread position:
               95-348
               

               Cow position:
               chr4:1184955-1184702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               168, 82
               

               Conread position:
               96-195
               

               Cow position:
               chr4:36057626-36057726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               96-256
               

               Cow position:
               chr4:52177159-52177324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               96-309
               

               Cow position:
               chr4:16644891-16645101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               83, 93
               

               Conread position:
               96-365
               

               Cow position:
               chr4:32272724-32272997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 220
               

               Conread position:
               96-407
               

               Cow position:
               chr4:10056442-10056147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               97-404
               

               Cow position:
               chr4:10851226-10851513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               283, 8
               

               Conread position:
               98-212
               

               Cow position:
               chr4:21065220-21065106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 81
               

               Conread position:
               101-407
               

               Cow position:
               chr4:30792200-30791905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               102-407
               

               Cow position:
               chr4:19324211-19323906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 76
               

               Conread position:
               105-331
               

               Cow position:
               chr4:65730544-65730762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               105-397
               

               Cow position:
               chr4:63095841-63096133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               103, 60
               

               Conread position:
               106-407
               

               Cow position:
               chr4:21875022-21874744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               107-227
               

               Cow position:
               chr4:52268109-52268225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               108-330
               

               Cow position:
               chr4:21532874-21533085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               116-376
               

               Cow position:
               chr4:50675937-50676205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 42
               

               Conread position:
               116-398
               

               Cow position:
               chr4:9825510-9825781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               256, 62
               

               Conread position:
               121-397
               

               Cow position:
               chr4:49826486-49826194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 6
               

               Conread position:
               129-377
               

               Cow position:
               chr4:45909769-45910012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               139-407
               

               Cow position:
               chr4:41300802-41301056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               140-406
               

               Cow position:
               chr4:19098668-19098400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 18
               

               Conread position:
               141-383
               

               Cow position:
               chr4:27755099-27755348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               143-330
               

               Cow position:
               chr4:33870266-33870085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               160-400
               

               Cow position:
               chr4:48173316-48173078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 15
               

               Conread position:
               163-407
               

               Cow position:
               chr4:2051-1804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               165-374
               

               Cow position:
               chr4:14500070-14500277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 5
               

               Conread position:
               168-405
               

               Cow position:
               chr4:65950833-65950591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               11, 106
               

               Conread position:
               169-407
               

               Cow position:
               chr4:44782542-44782307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               171-397
               

               Cow position:
               chr4:12591040-12591270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               173-407
               

               Cow position:
               chr4:19321907-19322146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               174-406
               

               Cow position:
               chr4:22344859-22345088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               175-407
               

               Cow position:
               chr4:22725258-22725034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 125
               

               Conread position:
               178-372
               

               Cow position:
               chr4:11496485-11496677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 88
               

               Conread position:
               179-407
               

               Cow position:
               chr4:37675776-37675549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               179-407
               

               Cow position:
               chr4:65815550-65815771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               12, 28
               

               Conread position:
               180-407
               

               Cow position:
               chr4:16762568-16762795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               68, 11
               

               Conread position:
               184-407
               

               Cow position:
               chr4:47280283-47280065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               186-407
               

               Cow position:
               chr4:25879544-25879332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               187-407
               

               Cow position:
               chr4:13973819-13974035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               168, 20
               

               Conread position:
               190-407
               

               Cow position:
               chr4:13026450-13026236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               184, 31
               

               Conread position:
               191-407
               

               Cow position:
               chr4:20142765-20142974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               183, 15
               

               Conread position:
               193-407
               

               Cow position:
               chr4:51784329-51784112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               40, 13
               

               Conread position:
               194-341
               

               Cow position:
               chr4:21801162-21801017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               194-341
               

               Cow position:
               chr4:58389102-58389242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               194-376
               

               Cow position:
               chr4:15462101-15462288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-382
               

               Cow position:
               chr4:1890619-1890805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               195-328
               

               Cow position:
               chr4:26469797-26469665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               196-346
               

               Cow position:
               chr4:65806037-65805890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               199-329
               

               Cow position:
               chr4:5047006-5047134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               199-405
               

               Cow position:
               chr4:62771783-62771985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               175, 7
               

               Conread position:
               200-407
               

               Cow position:
               chr4:44613143-44612938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               6, 50
               

               Conread position:
               201-328
               

               Cow position:
               chr4:30845510-30845384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               5, 20
               

               Conread position:
               201-379
               

               Cow position:
               chr4:63349350-63349523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               5, 73
               

               Conread position:
               201-382
               

               Cow position:
               chr4:35638761-35638946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               203-407
               

               Cow position:
               chr4:48143977-48143768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 195
               

               Conread position:
               205-379
               

               Cow position:
               chr4:27699168-27698992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               19, 138
               

               Conread position:
               205-386
               

               Cow position:
               chr4:48902489-48902671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               205-390
               

               Cow position:
               chr4:13872041-13871853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               205-407
               

               Cow position:
               chr4:32259707-32259911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               206-353
               

               Cow position:
               chr4:8083662-8083811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               206-356
               

               Cow position:
               chr4:16814516-16814367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               206-405
               

               Cow position:
               chr4:16881224-16881427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               206-407
               

               Cow position:
               chr4:25888699-25888896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 64
               

               Conread position:
               206-407
               

               Cow position:
               chr4:36893493-36893291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               207-337
               

               Cow position:
               chr4:53833299-53833162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               207-405
               

               Cow position:
               chr4:15134065-15134275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               44, 51
               

               Conread position:
               208-338
               

               Cow position:
               chr4:51630914-51630785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               208-350
               

               Cow position:
               chr4:51708196-51708056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               208-407
               

               Cow position:
               chr4:54191223-54191022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               15, 127
               

               Conread position:
               209-336
               

               Cow position:
               chr4:39010180-39010054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               209-357
               

               Cow position:
               chr4:53819552-53819702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               209-404
               

               Cow position:
               chr4:45563879-45563679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               7, 155
               

               Conread position:
               209-407
               

               Cow position:
               chr4:45636298-45636100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               210-407
               

               Cow position:
               chr4:22101136-22101326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               211-407
               

               Cow position:
               chr4:26401084-26400896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               213-381
               

               Cow position:
               chr4:10968263-10968427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               214-376
               

               Cow position:
               chr4:58018471-58018309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 9
               

               Conread position:
               214-389
               

               Cow position:
               chr4:42231896-42232072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               214-407
               

               Cow position:
               chr4:14414221-14414410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               162, 9
               

               Conread position:
               214-407
               

               Cow position:
               chr4:44183990-44184177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               164, 18
               

               Conread position:
               215-344
               

               Cow position:
               chr4:22482451-22482319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               215-380
               

               Cow position:
               chr4:43542350-43542509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 63
               

               Conread position:
               215-407
               

               Cow position:
               chr4:29291638-29291453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               216-339
               

               Cow position:
               chr4:479667-479792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               216-363
               

               Cow position:
               chr4:43916416-43916266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr4:12676921-12676739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr4:22713368-22713556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               7, 42
               

               Conread position:
               216-407
               

               Cow position:
               chr4:23509721-23509527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               7, 99
               

               Conread position:
               217-407
               

               Cow position:
               chr4:4084326-4084516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               218-368
               

               Cow position:
               chr4:46560305-46560153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               218-377
               

               Cow position:
               chr4:12127513-12127676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               218-377
               

               Cow position:
               chr4:50687742-50687897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               5, 64
               

               Conread position:
               218-407
               

               Cow position:
               chr4:36290748-36290562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               5, 153
               

               Conread position:
               218-407
               

               Cow position:
               chr4:56239735-56239921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               5, 154
               

               Conread position:
               219-407
               

               Cow position:
               chr4:19500970-19501155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               220-406
               

               Cow position:
               chr4:1354492-1354686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 129
               

               Conread position:
               221-356
               

               Cow position:
               chr4:19496612-19496479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               221-376
               

               Cow position:
               chr4:29384115-29384267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               221-405
               

               Cow position:
               chr4:43515836-43515662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               221-406
               

               Cow position:
               chr4:17218010-17218195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               149, 26
               

               Conread position:
               222-321
               

               Cow position:
               chr4:43579294-43579393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-329
               

               Cow position:
               chr4:45483917-45483810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               7, 35
               

               Conread position:
               222-330
               

               Cow position:
               chr4:46761726-46761618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-351
               

               Cow position:
               chr4:45261927-45262058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               222-353
               

               Cow position:
               chr4:1236755-1236885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               222-367
               

               Cow position:
               chr4:19456568-19456713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-379
               

               Cow position:
               chr4:7698384-7698228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               222-379
               

               Cow position:
               chr4:23600286-23600129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-380
               

               Cow position:
               chr4:12135808-12135965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               128, 13
               

               Conread position:
               222-380
               

               Cow position:
               chr4:17052474-17052632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               222-380
               

               Cow position:
               chr4:19542251-19542099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               222-381
               

               Cow position:
               chr4:3268247-3268404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               152, 13
               

               Conread position:
               222-387
               

               Cow position:
               chr4:65463390-65463547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-388
               

               Cow position:
               chr4:38350080-38350246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               54, 150
               

               Conread position:
               222-388
               

               Cow position:
               chr4:65265187-65265349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               222-389
               

               Cow position:
               chr4:51920663-51920494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               222-390
               

               Cow position:
               chr4:22907623-22907455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               139, 157
               

               Conread position:
               222-405
               

               Cow position:
               chr4:56591156-56590977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               222-406
               

               Cow position:
               chr4:41370820-41371006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr4:59378028-59377844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr4:4320872-4321066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               94, 150
               

               Conread position:
               222-407
               

               Cow position:
               chr4:19102763-19102951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 133
               

               Conread position:
               222-407
               

               Cow position:
               chr4:19407879-19408066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               151, 67
               

               Conread position:
               222-407
               

               Cow position:
               chr4:19435374-19435193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr4:23846933-23847114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr4:34211286-34211100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               222-407
               

               Cow position:
               chr4:45626509-45626689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr4:45662394-45662575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 60
               

               Conread position:
               222-407
               

               Cow position:
               chr4:45706157-45705979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr4:46455950-46456126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr4:46494422-46494230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               90, 157
               

               Conread position:
               222-407
               

               Cow position:
               chr4:46591785-46591599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               151, 18
               

               Conread position:
               222-407
               

               Cow position:
               chr4:47510503-47510324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr4:59002021-59002200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr4:62472198-62472014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               222-445
               

               Cow position:
               chr4:45583004-45583222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               150, 82
               

               Conread position:
               223-351
               

               Cow position:
               chr4:17790174-17790302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-364
               

               Cow position:
               chr4:61608847-61608988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-365
               

               Cow position:
               chr4:13919095-13918957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               223-368
               

               Cow position:
               chr4:19539119-19539264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-372
               

               Cow position:
               chr4:19700213-19700067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               223-376
               

               Cow position:
               chr4:33091491-33091338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-383
               

               Cow position:
               chr4:38999545-38999378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               223-384
               

               Cow position:
               chr4:38358707-38358867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               223-385
               

               Cow position:
               chr4:39128655-39128499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               223-387
               

               Cow position:
               chr4:20124848-20125016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               223-388
               

               Cow position:
               chr4:33181662-33181497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-388
               

               Cow position:
               chr4:39458769-39458596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               223-399
               

               Cow position:
               chr4:25197376-25197553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 171
               

               Conread position:
               223-402
               

               Cow position:
               chr4:44772925-44773105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               223-403
               

               Cow position:
               chr4:58248519-58248339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               149, 89
               

               Conread position:
               223-404
               

               Cow position:
               chr4:13344656-13344473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               223-406
               

               Cow position:
               chr4:23450976-23451160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               108, 169
               

               Conread position:
               223-406
               

               Cow position:
               chr4:28771949-28772137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               57, 52
               

               Conread position:
               223-407
               

               Cow position:
               chr4:2602348-2602166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               149, 38
               

               Conread position:
               223-407
               

               Cow position:
               chr4:10732340-10732157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr4:19709057-19708864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr4:22546723-22546904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               11, 54
               

               Conread position:
               223-407
               

               Cow position:
               chr4:27632557-27632384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr4:34383224-34383409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-407
               

               Cow position:
               chr4:37915218-37915404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               151, 109
               

               Conread position:
               223-407
               

               Cow position:
               chr4:45775220-45775405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               155
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 164
               

               Conread position:
               223-407
               

               Cow position:
               chr4:47038885-47038700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr4:51769224-51769045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               223-407
               

               Cow position:
               chr4:54920972-54921154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               28, 98
               

               Conread position:
               223-407
               

               Cow position:
               chr4:66380222-66380409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               149, 17
               

               Conread position:
               224-367
               

               Cow position:
               chr4:45213071-45213216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               224-389
               

               Cow position:
               chr4:48322151-48321985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 29
               

               Conread position:
               224-406
               

               Cow position:
               chr4:396048-395865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 37
               

               Conread position:
               224-407
               

               Cow position:
               chr4:2774836-2774651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               74, 153
               

               Conread position:
               225-407
               

               Cow position:
               chr4:45738359-45738545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr4:3850666-3850486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr4:29805259-29805434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr4:36577512-36577696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               88, 67
               

               Conread position:
               226-446
               

               Cow position:
               chr4:30974443-30974236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               183, 23
               

               Conread position:
               228-379
               

               Cow position:
               chr4:31761379-31761228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               228-407
               

               Cow position:
               chr4:13222074-13222249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               230-406
               

               Cow position:
               chr4:12561152-12560963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               231-345
               

               Cow position:
               chr4:348315-348429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-347
               

               Cow position:
               chr4:47230888-47231004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-347
               

               Cow position:
               chr4:47283903-47284019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-348
               

               Cow position:
               chr4:19561898-19561781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-359
               

               Cow position:
               chr4:61268300-61268172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               121, 9
               

               Conread position:
               231-365
               

               Cow position:
               chr4:44786152-44786018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-367
               

               Cow position:
               chr4:30795235-30795366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               231-371
               

               Cow position:
               chr4:54937191-54937047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 120
               

               Conread position:
               231-372
               

               Cow position:
               chr4:15236742-15236605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr4:27530228-27530087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-374
               

               Cow position:
               chr4:61757771-61757635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               231-376
               

               Cow position:
               chr4:1645983-1646127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               231-377
               

               Cow position:
               chr4:40995840-40995696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-377
               

               Cow position:
               chr4:60141412-60141553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-380
               

               Cow position:
               chr4:2099740-2099590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-384
               

               Cow position:
               chr4:45862522-45862375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               231-387
               

               Cow position:
               chr4:38209865-38210020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr4:67393201-67393045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               231-395
               

               Cow position:
               chr4:46435434-46435268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               129, 157
               

               Conread position:
               231-398
               

               Cow position:
               chr4:36744688-36744526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               97, 81
               

               Conread position:
               231-399
               

               Cow position:
               chr4:20026993-20027164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 29
               

               Conread position:
               231-402
               

               Cow position:
               chr4:44838785-44838956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               142, 25
               

               Conread position:
               231-403
               

               Cow position:
               chr4:19199177-19199353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr4:15905212-15905034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr4:26323850-26323673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr4:43865747-43865920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               141, 97
               

               Conread position:
               231-405
               

               Cow position:
               chr4:69411805-69411977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               231-406
               

               Cow position:
               chr4:62370421-62370251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr4:1495299-1495470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               163, 56
               

               Conread position:
               231-407
               

               Cow position:
               chr4:12004324-12004159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr4:24481563-24481736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               106, 30
               

               Conread position:
               231-407
               

               Cow position:
               chr4:32458750-32458928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               101, 164
               

               Conread position:
               231-407
               

               Cow position:
               chr4:32693898-32693718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr4:37502923-37502755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 77
               

               Conread position:
               231-407
               

               Cow position:
               chr4:37732373-37732549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr4:37935174-37935350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               9, 141
               

               Conread position:
               231-407
               

               Cow position:
               chr4:38946325-38946142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               99, 80
               

               Conread position:
               231-407
               

               Cow position:
               chr4:61188760-61188936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               142, 26
               

               Conread position:
               231-407
               

               Cow position:
               chr4:61313103-61313275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr4:65175035-65175209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-408
               

               Cow position:
               chr4:34562491-34562312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               143, 105
               

               Conread position:
               231-427
               

               Cow position:
               chr4:49629591-49629394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 142
               

               Conread position:
               231-427
               

               Cow position:
               chr4:54541528-54541728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               141, 165
               

               Conread position:
               232-339
               

               Cow position:
               chr4:56805285-56805182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               232-367
               

               Cow position:
               chr4:46702550-46702684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               232-374
               

               Cow position:
               chr4:12047987-12047839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               232-380
               

               Cow position:
               chr4:61704756-61704900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 87
               

               Conread position:
               232-381
               

               Cow position:
               chr4:37343231-37343087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               232-397
               

               Cow position:
               chr4:13668513-13668680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               232-400
               

               Cow position:
               chr4:48104460-48104626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               232-406
               

               Cow position:
               chr4:38156979-38157156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               232-406
               

               Cow position:
               chr4:60897174-60897341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               149, 80
               

               Conread position:
               232-407
               

               Cow position:
               chr4:203036-203208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               232-407
               

               Cow position:
               chr4:508800-508974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr4:3837384-3837206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               45, 151
               

               Conread position:
               232-407
               

               Cow position:
               chr4:5963881-5964054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               232-407
               

               Cow position:
               chr4:13941565-13941396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr4:24371752-24371924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               101, 24
               

               Conread position:
               232-407
               

               Cow position:
               chr4:52779960-52779786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               37, 138
               

               Conread position:
               232-407
               

               Cow position:
               chr4:52823293-52823475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 138
               

               Conread position:
               233-380
               

               Cow position:
               chr4:46883563-46883711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               233-381
               

               Cow position:
               chr4:45874357-45874506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               5, 26
               

               Conread position:
               233-386
               

               Cow position:
               chr4:31505916-31506069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-387
               

               Cow position:
               chr4:69543290-69543136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-406
               

               Cow position:
               chr4:46136857-46136686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               233-406
               

               Cow position:
               chr4:47748518-47748349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               139, 10
               

               Conread position:
               233-407
               

               Cow position:
               chr4:27276436-27276611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               148, 126
               

               Conread position:
               233-408
               

               Cow position:
               chr4:54789747-54789572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               233-422
               

               Cow position:
               chr4:8705102-8704913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               101, 140
               

               Conread position:
               234-399
               

               Cow position:
               chr4:61235100-61235264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               133, 18
               

               Conread position:
               234-400
               

               Cow position:
               chr4:18756541-18756372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               234-406
               

               Cow position:
               chr4:45595925-45596095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               77, 69
               

               Conread position:
               234-407
               

               Cow position:
               chr4:55395868-55395695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               140, 54
               

               Conread position:
               234-445
               

               Cow position:
               chr4:19314119-19313908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               140, 196
               

               Conread position:
               235-347
               

               Cow position:
               chr4:13140991-13141100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               235-353
               

               Cow position:
               chr4:61969620-61969741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               235-372
               

               Cow position:
               chr4:10958847-10958706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               235-381
               

               Cow position:
               chr4:19256799-19256655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               235-383
               

               Cow position:
               chr4:9444581-9444729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               235-383
               

               Cow position:
               chr4:45685563-45685416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               235-385
               

               Cow position:
               chr4:38700051-38700200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-402
               

               Cow position:
               chr4:961545-961716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr4:7704219-7704393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr4:13284485-13284316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               138, 57
               

               Conread position:
               235-407
               

               Cow position:
               chr4:20147289-20147119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr4:34369344-34369518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               137, 153
               

               Conread position:
               235-407
               

               Cow position:
               chr4:49794765-49794601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr4:56570912-56570741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr4:66547662-66547835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               137, 152
               

               Conread position:
               235-441
               

               Cow position:
               chr4:45589495-45589698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               117, 77
               

               Conread position:
               235-442
               

               Cow position:
               chr4:33910374-33910176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               236-390
               

               Cow position:
               chr4:20157311-20157460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 54
               

               Conread position:
               236-405
               

               Cow position:
               chr4:4277570-4277734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               145, 73
               

               Conread position:
               236-405
               

               Cow position:
               chr4:16594187-16594016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               130, 96
               

               Conread position:
               236-407
               

               Cow position:
               chr4:21017-20852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr4:5460757-5460932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               134, 20
               

               Conread position:
               236-407
               

               Cow position:
               chr4:10999610-10999773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr4:63471970-63472140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr4:64657198-64657362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               136, 17
               

               Conread position:
               236-407
               

               Cow position:
               chr4:68764620-68764455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               152, 45
               

               Conread position:
               237-396
               

               Cow position:
               chr4:6653825-6653669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               144, 16
               

               Conread position:
               242-396
               

               Cow position:
               chr4:27344580-27344735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 72
               

               Conread position:
               242-406
               

               Cow position:
               chr4:53126210-53126051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               242-441
               

               Cow position:
               chr4:66256785-66256587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               39, 14
               

               Conread position:
               243-380
               

               Cow position:
               chr4:47305175-47305038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               6, 14
               

               Conread position:
               243-386
               

               Cow position:
               chr4:60363446-60363304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               128, 48
               

               Conread position:
               243-388
               

               Cow position:
               chr4:36517385-36517527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               131, 93
               

               Conread position:
               243-405
               

               Cow position:
               chr4:46183511-46183346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               243-406
               

               Cow position:
               chr4:26012498-26012331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               102, 46
               

               Conread position:
               243-406
               

               Cow position:
               chr4:26830804-26830637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               102, 46
               

               Conread position:
               243-407
               

               Cow position:
               chr4:19292819-19292654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               9, 15
               

               Conread position:
               243-407
               

               Cow position:
               chr4:45074157-45073998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr4:5999099-5999258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               129, 28
               

               Conread position:
               246-445
               

               Cow position:
               chr4:18107066-18107261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               163, 10
               

               Conread position:
               247-396
               

               Cow position:
               chr4:41291860-41292007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               125, 65
               

               Conread position:
               247-407
               

               Cow position:
               chr4:19315914-19316068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr4:19430459-19430294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               250-391
               

               Cow position:
               chr4:59008264-59008403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               251-407
               

               Cow position:
               chr4:33395608-33395767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               252-407
               

               Cow position:
               chr4:36929398-36929251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               256-406
               

               Cow position:
               chr4:65432235-65432083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               258-407
               

               Cow position:
               chr4:11021568-11021720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               258-407
               

               Cow position:
               chr4:17474522-17474373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               261-406
               

               Cow position:
               chr4:51730030-51729887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 13
               

               Conread position:
               261-407
               

               Cow position:
               chr4:34165895-34166043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               262-407
               

               Cow position:
               chr4:5577132-5577275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               275-407
               

               Cow position:
               chr4:54930356-54930486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               98, 37
               

               Conread position:
               275-407
               

               Cow position:
               chr4:68362987-68362856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               105, 37
               

               Conread position:
               282-407
               

               Cow position:
               chr4:21371450-21371323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               100, 89
               

               Conread position:
               284-407
               

               Cow position:
               chr4:39231464-39231589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               300-407
               

               Cow position:
               chr4:35939966-35940072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               315-407
               

               Cow position:
               chr4:2537218-2537126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               67-361
               

               Cow position:
               chr5:35647638-35647356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               12, 104
               

               Conread position:
               68-177
               

               Cow position:
               chr5:36258257-36258366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-331
               

               Cow position:
               chr5:1090520-1090776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               9, 56
               

               Conread position:
               80-432
               

               Cow position:
               chr5:1165461-1165115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               82-406
               

               Cow position:
               chr5:58447073-58446774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 10
               

               Conread position:
               83-220
               

               Cow position:
               chr5:61811459-61811322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               83-227
               

               Cow position:
               chr5:26728482-26728344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               7, 36
               

               Conread position:
               87-181
               

               Cow position:
               chr5:44868596-44868503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               88-357
               

               Cow position:
               chr5:49259749-49260019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               88-406
               

               Cow position:
               chr5:40559917-40559605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 105
               

               Conread position:
               89-195
               

               Cow position:
               chr5:33273937-33273831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               21, 90
               

               Conread position:
               89-349
               

               Cow position:
               chr5:42622902-42623154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               89-361
               

               Cow position:
               chr5:9859135-9859406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               89-376
               

               Cow position:
               chr5:56428053-56428313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               89-390
               

               Cow position:
               chr5:32379117-32378831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               46, 116
               

               Conread position:
               89-406
               

               Cow position:
               chr5:37378143-37377832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               19, 247
               

               Conread position:
               93-407
               

               Cow position:
               chr5:43992585-43992289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 85
               

               Conread position:
               94-181
               

               Cow position:
               chr5:16937800-16937886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               77
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-203
               

               Cow position:
               chr5:52108024-52108130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-204
               

               Cow position:
               chr5:13392872-13392760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 85
               

               Conread position:
               94-268
               

               Cow position:
               chr5:36207308-36207481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               84, 137
               

               Conread position:
               94-288
               

               Cow position:
               chr5:52268066-52268256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               153, 84
               

               Conread position:
               94-322
               

               Cow position:
               chr5:28324595-28324387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 77
               

               Conread position:
               94-338
               

               Cow position:
               chr5:54067767-54068005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               154, 76
               

               Conread position:
               94-342
               

               Cow position:
               chr5:4956348-4956580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               94-378
               

               Cow position:
               chr5:27293615-27293889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 84
               

               Conread position:
               94-407
               

               Cow position:
               chr5:34301180-34300883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 85
               

               Conread position:
               94-407
               

               Cow position:
               chr5:45419855-45420167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 84
               

               Conread position:
               94-407
               

               Cow position:
               chr5:59115666-59115354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               86, 56
               

               Conread position:
               95-370
               

               Cow position:
               chr5:44874455-44874197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               95-376
               

               Cow position:
               chr5:35513500-35513213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               76, 135
               

               Conread position:
               95-407
               

               Cow position:
               chr5:58856381-58856071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 71
               

               Conread position:
               95-407
               

               Cow position:
               chr5:59872804-59873124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 10
               

               Conread position:
               96-297
               

               Cow position:
               chr5:32262038-32262243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               96-401
               

               Cow position:
               chr5:54060575-54060249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               237
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               100-201
               

               Cow position:
               chr5:31975760-31975658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               101-216
               

               Cow position:
               chr5:64432400-64432287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               101-228
               

               Cow position:
               chr5:55130206-55130077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               85, 77
               

               Conread position:
               101-318
               

               Cow position:
               chr5:29860600-29860388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               101-384
               

               Cow position:
               chr5:4709868-4710161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               68, 227
               

               Conread position:
               101-407
               

               Cow position:
               chr5:2851877-2851555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               101-407
               

               Cow position:
               chr5:30949629-30949950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 35
               

               Conread position:
               101-407
               

               Cow position:
               chr5:54311583-54311302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               281, 78
               

               Conread position:
               105-225
               

               Cow position:
               chr5:14416037-14415914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 74
               

               Conread position:
               105-380
               

               Cow position:
               chr5:63656749-63656472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               106-337
               

               Cow position:
               chr5:46702995-46702765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 40
               

               Conread position:
               106-407
               

               Cow position:
               chr5:51935442-51935159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               109-407
               

               Cow position:
               chr5:54767664-54767942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               277, 58
               

               Conread position:
               111-294
               

               Cow position:
               chr5:51564941-51564765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               116-351
               

               Cow position:
               chr5:46749574-46749798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               116-378
               

               Cow position:
               chr5:51490005-51490250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               256, 62
               

               Conread position:
               116-407
               

               Cow position:
               chr5:56338779-56339053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               265, 23
               

               Conread position:
               118-340
               

               Cow position:
               chr5:40515034-40515252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               7, 48
               

               Conread position:
               134-407
               

               Cow position:
               chr5:36856283-36856552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               138-350
               

               Cow position:
               chr5:6130806-6130594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 40
               

               Conread position:
               139-407
               

               Cow position:
               chr5:55019521-55019259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               140-372
               

               Cow position:
               chr5:14742449-14742216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               154-339
               

               Cow position:
               chr5:18091223-18091039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 65
               

               Conread position:
               161-316
               

               Cow position:
               chr5:54153996-54154144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               161-407
               

               Cow position:
               chr5:26990598-26990359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               165-338
               

               Cow position:
               chr5:56485282-56485110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               165-407
               

               Cow position:
               chr5:54086747-54086510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               8, 61
               

               Conread position:
               168-353
               

               Cow position:
               chr5:54436964-54436777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               20, 29
               

               Conread position:
               168-372
               

               Cow position:
               chr5:55129547-55129345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               168-407
               

               Cow position:
               chr5:36839164-36838924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               171-383
               

               Cow position:
               chr5:60908873-60908658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               8, 153
               

               Conread position:
               171-407
               

               Cow position:
               chr5:34625162-34624924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               173-369
               

               Cow position:
               chr5:1396803-1396605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               176-348
               

               Cow position:
               chr5:45037447-45037276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               176-407
               

               Cow position:
               chr5:69731695-69731470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 53
               

               Conread position:
               177-401
               

               Cow position:
               chr5:46672400-46672178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               178-406
               

               Cow position:
               chr5:37808472-37808702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               193, 18
               

               Conread position:
               179-346
               

               Cow position:
               chr5:57744729-57744896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               180-400
               

               Cow position:
               chr5:47696253-47696472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 135
               

               Conread position:
               183-407
               

               Cow position:
               chr5:28302552-28302783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               144, 217
               

               Conread position:
               186-397
               

               Cow position:
               chr5:49341862-49342074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               198, 20
               

               Conread position:
               187-361
               

               Cow position:
               chr5:12738375-12738542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               187-407
               

               Cow position:
               chr5:49685088-49685303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               19, 67
               

               Conread position:
               188-352
               

               Cow position:
               chr5:38382616-38382777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               189-406
               

               Cow position:
               chr5:46322621-46322829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               181, 7
               

               Conread position:
               189-407
               

               Cow position:
               chr5:53855888-53855665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               122, 17
               

               Conread position:
               190-365
               

               Cow position:
               chr5:65050027-65050202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               154, 124
               

               Conread position:
               191-403
               

               Cow position:
               chr5:52108086-52108296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               11, 42
               

               Conread position:
               191-407
               

               Cow position:
               chr5:64758585-64758804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               183, 30
               

               Conread position:
               192-367
               

               Cow position:
               chr5:56361974-56361803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               192-401
               

               Cow position:
               chr5:61875717-61875515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               194-390
               

               Cow position:
               chr5:58555317-58555118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               194-407
               

               Cow position:
               chr5:57737282-57737071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               13, 180
               

               Conread position:
               194-407
               

               Cow position:
               chr5:74858750-74858539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               174, 10
               

               Conread position:
               196-407
               

               Cow position:
               chr5:56317464-56317264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               197-406
               

               Cow position:
               chr5:41981544-41981338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               177, 9
               

               Conread position:
               197-407
               

               Cow position:
               chr5:55795789-55795998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               112, 175
               

               Conread position:
               197-408
               

               Cow position:
               chr5:26476842-26477055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               179, 9
               

               Conread position:
               199-376
               

               Cow position:
               chr5:25020595-25020769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               199-406
               

               Cow position:
               chr5:59325667-59325867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               39, 7
               

               Conread position:
               203-407
               

               Cow position:
               chr5:47316803-47317004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               205-340
               

               Cow position:
               chr5:44901678-44901543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               205-346
               

               Cow position:
               chr5:695027-694892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 15
               

               Conread position:
               205-407
               

               Cow position:
               chr5:6443984-6444184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               206-372
               

               Cow position:
               chr5:39447365-39447533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               206-402
               

               Cow position:
               chr5:35969700-35969507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr5:7698168-7697972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr5:23678537-23678735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               168, 27
               

               Conread position:
               206-407
               

               Cow position:
               chr5:36855374-36855172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               116, 167
               

               Conread position:
               206-407
               

               Cow position:
               chr5:52000388-52000189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               24, 85
               

               Conread position:
               207-343
               

               Cow position:
               chr5:4347539-4347673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               207-372
               

               Cow position:
               chr5:67634347-67634515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               207-407
               

               Cow position:
               chr5:33273858-33273657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               120, 17
               

               Conread position:
               208-376
               

               Cow position:
               chr5:2827538-2827373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               208-400
               

               Cow position:
               chr5:21039818-21040001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               24, 15
               

               Conread position:
               208-405
               

               Cow position:
               chr5:9089862-9090052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               208-406
               

               Cow position:
               chr5:67932308-67932499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               166, 31
               

               Conread position:
               209-407
               

               Cow position:
               chr5:66972594-66972395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               169, 161
               

               Conread position:
               212-415
               

               Cow position:
               chr5:9369108-9369308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               11, 159
               

               Conread position:
               215-359
               

               Cow position:
               chr5:47743788-47743643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 72
               

               Conread position:
               216-345
               

               Cow position:
               chr5:19079406-19079281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-378
               

               Cow position:
               chr5:11562566-11562727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               111, 16
               

               Conread position:
               216-405
               

               Cow position:
               chr5:35459135-35459327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               78, 180
               

               Conread position:
               216-406
               

               Cow position:
               chr5:44752146-44752349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr5:20779238-20779429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               7, 114
               

               Conread position:
               216-407
               

               Cow position:
               chr5:55177042-55176857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               146, 7
               

               Conread position:
               217-348
               

               Cow position:
               chr5:36823040-36822913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               218-346
               

               Cow position:
               chr5:16668854-16668725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               218-407
               

               Cow position:
               chr5:30845267-30845078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               5, 95
               

               Conread position:
               218-407
               

               Cow position:
               chr5:41713454-41713264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               219-365
               

               Cow position:
               chr5:11229520-11229663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               219-407
               

               Cow position:
               chr5:41294236-41294048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               33, 115
               

               Conread position:
               221-390
               

               Cow position:
               chr5:56287349-56287519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               140, 149
               

               Conread position:
               221-406
               

               Cow position:
               chr5:39258659-39258480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 86
               

               Conread position:
               221-407
               

               Cow position:
               chr5:15471082-15470899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               161, 91
               

               Conread position:
               221-407
               

               Cow position:
               chr5:40109645-40109458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               160, 79
               

               Conread position:
               221-407
               

               Cow position:
               chr5:45273349-45273533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               153, 35
               

               Conread position:
               222-331
               

               Cow position:
               chr5:29979806-29979915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-346
               

               Cow position:
               chr5:49821579-49821456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               222-347
               

               Cow position:
               chr5:44734573-44734698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-349
               

               Cow position:
               chr5:51277702-51277828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               222-359
               

               Cow position:
               chr5:26147742-26147606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               222-379
               

               Cow position:
               chr5:57062376-57062534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               222-382
               

               Cow position:
               chr5:56860593-56860441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               222-382
               

               Cow position:
               chr5:62378932-62378774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               144, 90
               

               Conread position:
               222-385
               

               Cow position:
               chr5:63059213-63059064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               222-386
               

               Cow position:
               chr5:29352974-29353136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 38
               

               Conread position:
               222-400
               

               Cow position:
               chr5:30805316-30805140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               144
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               222-401
               

               Cow position:
               chr5:57230185-57230367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               222-405
               

               Cow position:
               chr5:42845439-42845628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr5:30247375-30247552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr5:50713604-50713803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr5:60715216-60715394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               158, 92
               

               Conread position:
               222-407
               

               Cow position:
               chr5:16206003-16206188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               72, 110
               

               Conread position:
               222-407
               

               Cow position:
               chr5:17602053-17602234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               145, 101
               

               Conread position:
               222-407
               

               Cow position:
               chr5:43929584-43929771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               152, 111
               

               Conread position:
               222-407
               

               Cow position:
               chr5:55956064-55955874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               62, 24
               

               Conread position:
               222-407
               

               Cow position:
               chr5:60183958-60183768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 176
               

               Conread position:
               222-407
               

               Cow position:
               chr5:63234676-63234859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               15, 111
               

               Conread position:
               222-407
               

               Cow position:
               chr5:69337972-69337790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr5:69461487-69461297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               72, 60
               

               Conread position:
               222-445
               

               Cow position:
               chr5:57101372-57101595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               148, 31
               

               Conread position:
               223-345
               

               Cow position:
               chr5:21003465-21003345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               42, 90
               

               Conread position:
               223-348
               

               Cow position:
               chr5:16185529-16185404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-352
               

               Cow position:
               chr5:35190261-35190132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-353
               

               Cow position:
               chr5:38040413-38040543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-372
               

               Cow position:
               chr5:2469061-2469205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               223-372
               

               Cow position:
               chr5:6520161-6520013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               93, 29
               

               Conread position:
               223-372
               

               Cow position:
               chr5:30276841-30276692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-372
               

               Cow position:
               chr5:52723726-52723579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               223-386
               

               Cow position:
               chr5:12760971-12761131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               151, 17
               

               Conread position:
               223-386
               

               Cow position:
               chr5:64523711-64523876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               223-388
               

               Cow position:
               chr5:45225665-45225827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 35
               

               Conread position:
               223-390
               

               Cow position:
               chr5:25597984-25597820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 108
               

               Conread position:
               223-403
               

               Cow position:
               chr5:30253892-30253712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               157, 170
               

               Conread position:
               223-406
               

               Cow position:
               chr5:50101223-50101410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-406
               

               Cow position:
               chr5:53947048-53946864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr5:4031835-4032025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               66, 95
               

               Conread position:
               223-407
               

               Cow position:
               chr5:12902068-12901884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               131, 156
               

               Conread position:
               223-407
               

               Cow position:
               chr5:17999345-17999525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               151, 87
               

               Conread position:
               223-407
               

               Cow position:
               chr5:18574325-18574140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               223-407
               

               Cow position:
               chr5:26094015-26094201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               151, 172
               

               Conread position:
               223-407
               

               Cow position:
               chr5:35208412-35208231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr5:41935506-41935686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr5:42064356-42064170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr5:52165028-52165211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               151, 49
               

               Conread position:
               223-407
               

               Cow position:
               chr5:55756264-55756458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr5:56071011-56070823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr5:57156163-57156347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               122, 17
               

               Conread position:
               223-407
               

               Cow position:
               chr5:57686586-57686774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr5:57994728-57994900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               223-411
               

               Cow position:
               chr5:18062169-18062357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               158, 5
               

               Conread position:
               223-445
               

               Cow position:
               chr5:33560583-33560803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               158, 148
               

               Conread position:
               224-381
               

               Cow position:
               chr5:59627250-59627093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-382
               

               Cow position:
               chr5:4267821-4267661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               224-383
               

               Cow position:
               chr5:73167862-73168017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               224-396
               

               Cow position:
               chr5:24946390-24946219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               95, 32
               

               Conread position:
               224-406
               

               Cow position:
               chr5:54350211-54350395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr5:7012701-7012881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               157, 37
               

               Conread position:
               224-407
               

               Cow position:
               chr5:11668035-11668217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr5:14903917-14904105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 110
               

               Conread position:
               224-407
               

               Cow position:
               chr5:15479275-15479091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               152, 43
               

               Conread position:
               224-407
               

               Cow position:
               chr5:20994936-20995128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr5:44446715-44446901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               225-382
               

               Cow position:
               chr5:33155962-33155811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               226-386
               

               Cow position:
               chr5:4226494-4226335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               226-386
               

               Cow position:
               chr5:29771676-29771515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               226-406
               

               Cow position:
               chr5:27188263-27188093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               148, 74
               

               Conread position:
               228-348
               

               Cow position:
               chr5:20882478-20882598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               228-395
               

               Cow position:
               chr5:64175980-64176144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               228-407
               

               Cow position:
               chr5:35982589-35982774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               230-346
               

               Cow position:
               chr5:30638434-30638551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               231-331
               

               Cow position:
               chr5:17644485-17644585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-343
               

               Cow position:
               chr5:70353840-70353953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               231-358
               

               Cow position:
               chr5:5847703-5847829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               231-365
               

               Cow position:
               chr5:58519273-58519407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-367
               

               Cow position:
               chr5:26723590-26723455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               231-367
               

               Cow position:
               chr5:60948275-60948140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               72, 78
               

               Conread position:
               231-371
               

               Cow position:
               chr5:5016568-5016432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr5:12300054-12299913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-372
               

               Cow position:
               chr5:15364412-15364271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               7, 71
               

               Conread position:
               231-372
               

               Cow position:
               chr5:61049475-61049334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 27
               

               Conread position:
               231-377
               

               Cow position:
               chr5:34914910-34915056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-378
               

               Cow position:
               chr5:56613420-56613567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 141
               

               Conread position:
               231-379
               

               Cow position:
               chr5:17566295-17566444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               13, 107
               

               Conread position:
               231-381
               

               Cow position:
               chr5:5257145-5257295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-381
               

               Cow position:
               chr5:44163225-44163375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               92, 141
               

               Conread position:
               231-385
               

               Cow position:
               chr5:39937258-39937104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               143, 102
               

               Conread position:
               231-391
               

               Cow position:
               chr5:17104993-17104836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-400
               

               Cow position:
               chr5:34528689-34528527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               231-401
               

               Cow position:
               chr5:44796590-44796759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               231-403
               

               Cow position:
               chr5:22242622-22242805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 80
               

               Conread position:
               231-405
               

               Cow position:
               chr5:6503738-6503914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr5:19524043-19523869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               231-405
               

               Cow position:
               chr5:28224595-28224423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr5:38739260-38739430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               129, 136
               

               Conread position:
               231-407
               

               Cow position:
               chr5:458631-458458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr5:4280591-4280415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               115, 142
               

               Conread position:
               231-407
               

               Cow position:
               chr5:11769412-11769236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               139, 90
               

               Conread position:
               231-407
               

               Cow position:
               chr5:12557144-12557325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr5:18289265-18289097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               142, 79
               

               Conread position:
               231-407
               

               Cow position:
               chr5:19752445-19752271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               143, 78
               

               Conread position:
               231-407
               

               Cow position:
               chr5:41165231-41165053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr5:44993906-44994075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               142, 80
               

               Conread position:
               231-407
               

               Cow position:
               chr5:45397712-45397539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               142, 56
               

               Conread position:
               231-407
               

               Cow position:
               chr5:47323605-47323432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr5:49501681-49501858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               150
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr5:51053506-51053683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               91, 134
               

               Conread position:
               231-407
               

               Cow position:
               chr5:57526786-57526951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr5:64591952-64592129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               162, 130
               

               Conread position:
               231-408
               

               Cow position:
               chr5:58790-58968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-408
               

               Cow position:
               chr5:3589170-3588992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               142, 68
               

               Conread position:
               231-408
               

               Cow position:
               chr5:71494964-71494785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               231-434
               

               Cow position:
               chr5:60210000-60210205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-439
               

               Cow position:
               chr5:72903093-72903293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               231-441
               

               Cow position:
               chr5:3771989-3771782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               143, 101
               

               Conread position:
               232-344
               

               Cow position:
               chr5:64843829-64843941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-349
               

               Cow position:
               chr5:51490460-51490577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-359
               

               Cow position:
               chr5:7177293-7177166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               232-379
               

               Cow position:
               chr5:72045534-72045678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 81
               

               Conread position:
               232-385
               

               Cow position:
               chr5:43858278-43858429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               232-390
               

               Cow position:
               chr5:16937887-16938038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               150, 47
               

               Conread position:
               232-402
               

               Cow position:
               chr5:38833263-38833093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               138, 100
               

               Conread position:
               232-406
               

               Cow position:
               chr5:2309416-2309589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               143, 21
               

               Conread position:
               232-407
               

               Cow position:
               chr5:28035884-28035708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               141, 24
               

               Conread position:
               232-407
               

               Cow position:
               chr5:50575925-50575752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr5:61455985-61455812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               139, 10
               

               Conread position:
               232-407
               

               Cow position:
               chr5:67212502-67212323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               138, 22
               

               Conread position:
               232-439
               

               Cow position:
               chr5:30092478-30092687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               233-376
               

               Cow position:
               chr5:60514887-60515030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 57
               

               Conread position:
               233-379
               

               Cow position:
               chr5:34347594-34347733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               233-379
               

               Cow position:
               chr5:65552576-65552712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               233-405
               

               Cow position:
               chr5:68537528-68537699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               141, 10
               

               Conread position:
               233-406
               

               Cow position:
               chr5:22446050-22445882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               233-407
               

               Cow position:
               chr5:45405185-45405008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               233-407
               

               Cow position:
               chr5:61784586-61784761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               234-328
               

               Cow position:
               chr5:38418656-38418563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               234-403
               

               Cow position:
               chr5:43604277-43604114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr5:63987306-63987482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               143, 73
               

               Conread position:
               234-407
               

               Cow position:
               chr5:64140678-64140500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               234-447
               

               Cow position:
               chr5:50871957-50871733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               71, 189
               

               Conread position:
               234-447
               

               Cow position:
               chr5:70678505-70678717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               235-374
               

               Cow position:
               chr5:37757700-37757834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               235-383
               

               Cow position:
               chr5:71454473-71454619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               235-386
               

               Cow position:
               chr5:35784850-35784999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               35, 78
               

               Conread position:
               235-391
               

               Cow position:
               chr5:39875263-39875109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-406
               

               Cow position:
               chr5:359800-359974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               235-406
               

               Cow position:
               chr5:7723804-7723633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               128, 141
               

               Conread position:
               235-406
               

               Cow position:
               chr5:29515366-29515528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               160, 83
               

               Conread position:
               235-407
               

               Cow position:
               chr5:18899112-18898943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr5:20128192-20128021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               8, 137
               

               Conread position:
               235-407
               

               Cow position:
               chr5:22643093-22643258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr5:23529144-23529313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               138, 22
               

               Conread position:
               235-407
               

               Cow position:
               chr5:49474406-49474581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               146, 134
               

               Conread position:
               235-407
               

               Cow position:
               chr5:55068845-55068673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               140, 155
               

               Conread position:
               235-407
               

               Cow position:
               chr5:56153754-56153581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               137, 64
               

               Conread position:
               235-407
               

               Cow position:
               chr5:57767848-57768014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr5:60747142-60747311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               149, 39
               

               Conread position:
               236-379
               

               Cow position:
               chr5:72006727-72006868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               236-401
               

               Cow position:
               chr5:5855996-5855834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr5:4221116-4220951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               119, 103
               

               Conread position:
               236-407
               

               Cow position:
               chr5:26262541-26262709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               143, 74
               

               Conread position:
               237-379
               

               Cow position:
               chr5:65679836-65679974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               237-406
               

               Cow position:
               chr5:29828183-29828017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               100, 29
               

               Conread position:
               242-376
               

               Cow position:
               chr5:6528817-6528681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               242-432
               

               Cow position:
               chr5:48867332-48867522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               163, 148
               

               Conread position:
               243-379
               

               Cow position:
               chr5:30562063-30561927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-382
               

               Cow position:
               chr5:43844532-43844670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               243-398
               

               Cow position:
               chr5:63627404-63627551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               140, 56
               

               Conread position:
               243-406
               

               Cow position:
               chr5:27306435-27306272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               120, 102
               

               Conread position:
               243-407
               

               Cow position:
               chr5:40237342-40237180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               127, 112
               

               Conread position:
               243-407
               

               Cow position:
               chr5:44847890-44848053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               91, 131
               

               Conread position:
               243-407
               

               Cow position:
               chr5:57074200-57074367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               135, 153
               

               Conread position:
               244-405
               

               Cow position:
               chr5:45574235-45574399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr5:19813090-19813256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               131, 161
               

               Conread position:
               247-377
               

               Cow position:
               chr5:56467817-56467688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               247-403
               

               Cow position:
               chr5:30233034-30232876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               133, 23
               

               Conread position:
               247-406
               

               Cow position:
               chr5:60189120-60188957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               250-376
               

               Cow position:
               chr5:41129866-41129740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               250-377
               

               Cow position:
               chr5:55350786-55350914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               75, 123
               

               Conread position:
               250-378
               

               Cow position:
               chr5:57736575-57736697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               250-386
               

               Cow position:
               chr5:67540077-67540213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               251-405
               

               Cow position:
               chr5:23357452-23357305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               253-407
               

               Cow position:
               chr5:58793486-58793642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               254-407
               

               Cow position:
               chr5:1087079-1087230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               254-407
               

               Cow position:
               chr5:16214807-16214651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               255-389
               

               Cow position:
               chr5:62415842-62415974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               255-407
               

               Cow position:
               chr5:32696704-32696856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               126, 34
               

               Conread position:
               255-407
               

               Cow position:
               chr5:50637940-50637793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               138, 77
               

               Conread position:
               256-407
               

               Cow position:
               chr5:52644962-52645112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               258-407
               

               Cow position:
               chr5:31481264-31481113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               258-407
               

               Cow position:
               chr5:55929060-55928908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               258-407
               

               Cow position:
               chr5:65883656-65883806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               263-407
               

               Cow position:
               chr5:57561634-57561487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               111, 133
               

               Conread position:
               266-403
               

               Cow position:
               chr5:31918750-31918616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               276-407
               

               Cow position:
               chr5:16509204-16509063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               305-406
               

               Cow position:
               chr5:21964358-21964256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               33-292
               

               Cow position:
               chr6:64399102-64398859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               53-331
               

               Cow position:
               chr6:53513691-53513965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               73-193
               

               Cow position:
               chr6:13040723-13040602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 78
               

               Conread position:
               76-203
               

               Cow position:
               chr6:56850282-56850158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               83-184
               

               Cow position:
               chr6:30688253-30688351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               85-325
               

               Cow position:
               chr6:46997508-46997731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               85-390
               

               Cow position:
               chr6:59297301-59297001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               82, 95
               

               Conread position:
               87-184
               

               Cow position:
               chr6:16762375-16762471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               87-322
               

               Cow position:
               chr6:50882857-50882646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               229, 46
               

               Conread position:
               87-407
               

               Cow position:
               chr6:47339069-47339376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 83
               

               Conread position:
               89-183
               

               Cow position:
               chr6:12711540-12711635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               89-236
               

               Cow position:
               chr6:28620353-28620204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               15, 92
               

               Conread position:
               89-345
               

               Cow position:
               chr6:58076688-58076436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               111, 16
               

               Conread position:
               89-366
               

               Cow position:
               chr6:21066596-21066862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 38
               

               Conread position:
               91-297
               

               Cow position:
               chr6:63471516-63471322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               92-358
               

               Cow position:
               chr6:54349982-54349724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               152, 76
               

               Conread position:
               93-407
               

               Cow position:
               chr6:35993856-35993565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               94-194
               

               Cow position:
               chr6:34569662-34569564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               94-220
               

               Cow position:
               chr6:16762883-16762759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-341
               

               Cow position:
               chr6:416427-416174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               85, 112
               

               Conread position:
               94-348
               

               Cow position:
               chr6:20431761-20431508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               102, 83
               

               Conread position:
               94-381
               

               Cow position:
               chr6:41936960-41937267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               32, 188
               

               Conread position:
               94-391
               

               Cow position:
               chr6:46331198-46330922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               95-204
               

               Cow position:
               chr6:35702079-35702188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               95-208
               

               Cow position:
               chr6:23353802-23353688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               88, 83
               

               Conread position:
               95-351
               

               Cow position:
               chr6:32809562-32809319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               95-352
               

               Cow position:
               chr6:603808-603555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 97
               

               Conread position:
               95-420
               

               Cow position:
               chr6:20606236-20605922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               278, 44
               

               Conread position:
               96-183
               

               Cow position:
               chr6:21004924-21004837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               78
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               82, 9
               

               Conread position:
               97-407
               

               Cow position:
               chr6:35964239-35964553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               81, 8
               

               Conread position:
               98-407
               

               Cow position:
               chr6:14958055-14958364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 80
               

               Conread position:
               99-310
               

               Cow position:
               chr6:54364488-54364695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               80, 6
               

               Conread position:
               99-335
               

               Cow position:
               chr6:60238820-60239053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               81, 90
               

               Conread position:
               99-393
               

               Cow position:
               chr6:37783668-37783396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               101-273
               

               Cow position:
               chr6:59994267-59994096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 78
               

               Conread position:
               101-390
               

               Cow position:
               chr6:1001960-1002266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               101-407
               

               Cow position:
               chr6:30974317-30974028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 76
               

               Conread position:
               101-407
               

               Cow position:
               chr6:35103046-35103352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 77
               

               Conread position:
               102-241
               

               Cow position:
               chr6:61544145-61544282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               94, 77
               

               Conread position:
               105-316
               

               Cow position:
               chr6:31231054-31231256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               181, 65
               

               Conread position:
               105-388
               

               Cow position:
               chr6:62220687-62220409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 61
               

               Conread position:
               106-383
               

               Cow position:
               chr6:29754531-29754824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 100
               

               Conread position:
               106-406
               

               Cow position:
               chr6:66531533-66531840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 205
               

               Conread position:
               108-249
               

               Cow position:
               chr6:35742414-35742279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               116-390
               

               Cow position:
               chr6:51969332-51969073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               258, 48
               

               Conread position:
               118-407
               

               Cow position:
               chr6:55535491-55535768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 48
               

               Conread position:
               121-284
               

               Cow position:
               chr6:44261380-44261542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               65, 57
               

               Conread position:
               122-317
               

               Cow position:
               chr6:36516204-36516031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               141-390
               

               Cow position:
               chr6:6343681-6343425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 104
               

               Conread position:
               148-359
               

               Cow position:
               chr6:40879019-40878806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 44
               

               Conread position:
               161-371
               

               Cow position:
               chr6:33450749-33450953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               162-369
               

               Cow position:
               chr6:16707243-16707034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               167-404
               

               Cow position:
               chr6:54990779-54991019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               168-401
               

               Cow position:
               chr6:19131648-19131416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               168-407
               

               Cow position:
               chr6:582058-582291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               169-383
               

               Cow position:
               chr6:22215248-22215470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 210
               

               Conread position:
               171-377
               

               Cow position:
               chr6:19225165-19225363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               171-400
               

               Cow position:
               chr6:457393-457166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               171-402
               

               Cow position:
               chr6:60451651-60451407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               171-407
               

               Cow position:
               chr6:18048808-18049043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               171-407
               

               Cow position:
               chr6:53519408-53519642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               230, 69
               

               Conread position:
               173-407
               

               Cow position:
               chr6:47799510-47799273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               33, 5
               

               Conread position:
               175-405
               

               Cow position:
               chr6:65903413-65903638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               176-360
               

               Cow position:
               chr6:27110812-27110626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 161
               

               Conread position:
               178-407
               

               Cow position:
               chr6:8787822-8788056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               33, 228
               

               Conread position:
               178-407
               

               Cow position:
               chr6:53090216-53089988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               189, 23
               

               Conread position:
               184-339
               

               Cow position:
               chr6:34512902-34512753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               185-342
               

               Cow position:
               chr6:47676216-47676060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 122
               

               Conread position:
               187-407
               

               Cow position:
               chr6:31635481-31635711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 129
               

               Conread position:
               187-407
               

               Cow position:
               chr6:51086262-51086051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               188-345
               

               Cow position:
               chr6:67689417-67689572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 20
               

               Conread position:
               190-385
               

               Cow position:
               chr6:23465836-23466030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               194-405
               

               Cow position:
               chr6:66131497-66131290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               195-331
               

               Cow position:
               chr6:139456-139587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-344
               

               Cow position:
               chr6:107236-107381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-404
               

               Cow position:
               chr6:7801201-7801410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 40
               

               Conread position:
               195-407
               

               Cow position:
               chr6:18117857-18118071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               181, 123
               

               Conread position:
               196-338
               

               Cow position:
               chr6:35702156-35702295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               196-346
               

               Cow position:
               chr6:19507995-19508146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               196-407
               

               Cow position:
               chr6:16764455-16764674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               116, 10
               

               Conread position:
               196-407
               

               Cow position:
               chr6:36284428-36284223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               164, 11
               

               Conread position:
               197-366
               

               Cow position:
               chr6:28900516-28900347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               152, 9
               

               Conread position:
               198-407
               

               Cow position:
               chr6:377318-377109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 9
               

               Conread position:
               198-407
               

               Cow position:
               chr6:33929353-33929569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               198-407
               

               Cow position:
               chr6:59069425-59069645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               199-348
               

               Cow position:
               chr6:37603755-37603606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 33
               

               Conread position:
               205-377
               

               Cow position:
               chr6:67214936-67214760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr6:8600178-8599986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr6:9302537-9302734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr6:46282820-46283027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               206-402
               

               Cow position:
               chr6:23532839-23532640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               206-405
               

               Cow position:
               chr6:10613024-10612836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 101
               

               Conread position:
               206-407
               

               Cow position:
               chr6:38771463-38771267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               13, 107
               

               Conread position:
               207-407
               

               Cow position:
               chr6:10399736-10399923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               207-407
               

               Cow position:
               chr6:18144378-18144172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               120, 170
               

               Conread position:
               208-369
               

               Cow position:
               chr6:19045801-19045641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               43, 15
               

               Conread position:
               208-407
               

               Cow position:
               chr6:5113874-5114066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               209-361
               

               Cow position:
               chr6:36643316-36643465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               210-407
               

               Cow position:
               chr6:9219444-9219254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               93, 103
               

               Conread position:
               210-407
               

               Cow position:
               chr6:43134762-43134957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               164, 13
               

               Conread position:
               212-349
               

               Cow position:
               chr6:15058551-15058415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               212-363
               

               Cow position:
               chr6:52044768-52044914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               214-383
               

               Cow position:
               chr6:6067528-6067697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               45, 9
               

               Conread position:
               214-390
               

               Cow position:
               chr6:58459895-58459718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               215-407
               

               Cow position:
               chr6:8094105-8094310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               215-407
               

               Cow position:
               chr6:23401820-23402009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               216-348
               

               Cow position:
               chr6:24491208-24491068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-379
               

               Cow position:
               chr6:37692922-37692761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 53
               

               Conread position:
               216-381
               

               Cow position:
               chr6:8688676-8688841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               154, 7
               

               Conread position:
               216-391
               

               Cow position:
               chr6:39093923-39093744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               216-406
               

               Cow position:
               chr6:38641668-38641476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 92
               

               Conread position:
               216-407
               

               Cow position:
               chr6:44078687-44078498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               7, 97
               

               Conread position:
               217-322
               

               Cow position:
               chr6:48278718-48278823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               217-407
               

               Cow position:
               chr6:35436166-35435973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               218-407
               

               Cow position:
               chr6:37149360-37149169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               155
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               218-407
               

               Cow position:
               chr6:46465992-46465804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 154
               

               Conread position:
               218-407
               

               Cow position:
               chr6:59603040-59603230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               218-407
               

               Cow position:
               chr6:64432109-64431916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               219-353
               

               Cow position:
               chr6:8468835-8468700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               219-353
               

               Cow position:
               chr6:22876761-22876896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               219-397
               

               Cow position:
               chr6:21535207-21535029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               114, 6
               

               Conread position:
               219-405
               

               Cow position:
               chr6:12091821-12092010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               219-407
               

               Cow position:
               chr6:12965024-12964833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               5, 177
               

               Conread position:
               219-407
               

               Cow position:
               chr6:27239837-27240025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               219-407
               

               Cow position:
               chr6:35990065-35990254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               99, 154
               

               Conread position:
               221-364
               

               Cow position:
               chr6:30825602-30825742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr6:38441339-38441157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr6:60118314-60118131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               153, 44
               

               Conread position:
               221-407
               

               Cow position:
               chr6:60740181-60739997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               222-343
               

               Cow position:
               chr6:47841718-47841596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               222-344
               

               Cow position:
               chr6:26408339-26408461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-348
               

               Cow position:
               chr6:19519539-19519415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               222-348
               

               Cow position:
               chr6:53711568-53711442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-370
               

               Cow position:
               chr6:2078647-2078797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               222-372
               

               Cow position:
               chr6:66947656-66947802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               222-379
               

               Cow position:
               chr6:35171772-35171613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 69
               

               Conread position:
               222-382
               

               Cow position:
               chr6:54127650-54127805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               222-390
               

               Cow position:
               chr6:61575985-61575825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               222-397
               

               Cow position:
               chr6:50504622-50504444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-402
               

               Cow position:
               chr6:33206900-33206728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               136, 13
               

               Conread position:
               222-403
               

               Cow position:
               chr6:15243421-15243239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               143, 172
               

               Conread position:
               222-405
               

               Cow position:
               chr6:13565252-13565067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               31, 36
               

               Conread position:
               222-407
               

               Cow position:
               chr6:2585108-2584922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr6:2623938-2623763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr6:15243002-15242813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr6:15447032-15447222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr6:17794598-17794780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr6:19292963-19292778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               140, 21
               

               Conread position:
               222-407
               

               Cow position:
               chr6:24781394-24781573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr6:37199372-37199549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               152, 44
               

               Conread position:
               222-407
               

               Cow position:
               chr6:50984386-50984206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr6:53546202-53546016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr6:53841340-53841522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr6:58370918-58370735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               222-407
               

               Cow position:
               chr6:61524039-61524226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-351
               

               Cow position:
               chr6:29852901-29853028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               223-371
               

               Cow position:
               chr6:31865257-31865115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               223-371
               

               Cow position:
               chr6:60777936-60777778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               223-376
               

               Cow position:
               chr6:69153574-69153425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               223-379
               

               Cow position:
               chr6:46173095-46173249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               26, 21
               

               Conread position:
               223-385
               

               Cow position:
               chr6:57079588-57079428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-386
               

               Cow position:
               chr6:14063137-14063308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               223-400
               

               Cow position:
               chr6:13367450-13367271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               50, 45
               

               Conread position:
               223-401
               

               Cow position:
               chr6:32453549-32453373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               16, 48
               

               Conread position:
               223-402
               

               Cow position:
               chr6:10105814-10105995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-403
               

               Cow position:
               chr6:24468231-24468406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               223-403
               

               Cow position:
               chr6:47305504-47305323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               150, 33
               

               Conread position:
               223-405
               

               Cow position:
               chr6:6201589-6201411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               223-405
               

               Cow position:
               chr6:10176137-10176313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               223-405
               

               Cow position:
               chr6:24110446-24110263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               151, 98
               

               Conread position:
               223-406
               

               Cow position:
               chr6:40032355-40032171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               147, 106
               

               Conread position:
               223-406
               

               Cow position:
               chr6:67617784-67617969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 19
               

               Conread position:
               223-407
               

               Cow position:
               chr6:120410-120226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               151, 109
               

               Conread position:
               223-407
               

               Cow position:
               chr6:3592562-3592380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               47, 51
               

               Conread position:
               223-407
               

               Cow position:
               chr6:14914071-14914260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               148, 120
               

               Conread position:
               223-407
               

               Cow position:
               chr6:16287895-16288071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               21, 78
               

               Conread position:
               223-407
               

               Cow position:
               chr6:19695971-19695791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr6:32126220-32126043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr6:56986486-56986664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               223-441
               

               Cow position:
               chr6:59104767-59104551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 151
               

               Conread position:
               224-371
               

               Cow position:
               chr6:66259898-66259747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 145
               

               Conread position:
               224-378
               

               Cow position:
               chr6:61681239-61681086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               150, 17
               

               Conread position:
               224-379
               

               Cow position:
               chr6:66590238-66590091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               224-388
               

               Cow position:
               chr6:8966261-8966098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               224-401
               

               Cow position:
               chr6:27219331-27219165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               150, 85
               

               Conread position:
               224-403
               

               Cow position:
               chr6:20219612-20219794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               224-406
               

               Cow position:
               chr6:60057495-60057672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr6:4691812-4691998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               147, 46
               

               Conread position:
               224-407
               

               Cow position:
               chr6:16352190-16352366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr6:21061723-21061906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               160, 29
               

               Conread position:
               225-407
               

               Cow position:
               chr6:37395237-37395427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               230-406
               

               Cow position:
               chr6:20196145-20196315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               230-407
               

               Cow position:
               chr6:10487742-10487568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               142, 5
               

               Conread position:
               230-407
               

               Cow position:
               chr6:38218824-38218650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               231-340
               

               Cow position:
               chr6:35654393-35654502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-345
               

               Cow position:
               chr6:12501006-12500885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               231-345
               

               Cow position:
               chr6:18135358-18135469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-347
               

               Cow position:
               chr6:15587438-15587554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-361
               

               Cow position:
               chr6:42728801-42728672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               231-364
               

               Cow position:
               chr6:5400603-5400736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               10, 66
               

               Conread position:
               231-369
               

               Cow position:
               chr6:28088892-28089029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               231-369
               

               Cow position:
               chr6:50771206-50771340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               231-370
               

               Cow position:
               chr6:40774175-40774314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-379
               

               Cow position:
               chr6:21587274-21587420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               231-380
               

               Cow position:
               chr6:16380701-16380552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               131, 136
               

               Conread position:
               231-380
               

               Cow position:
               chr6:51530031-51530182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               231-381
               

               Cow position:
               chr6:21475883-21475735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               231-382
               

               Cow position:
               chr6:21467111-21467259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               143, 81
               

               Conread position:
               231-382
               

               Cow position:
               chr6:43787754-43787903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr6:18447361-18447513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               231-384
               

               Cow position:
               chr6:57546072-57546217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               231-385
               

               Cow position:
               chr6:21111108-21110955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-386
               

               Cow position:
               chr6:54573417-54573261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               231-391
               

               Cow position:
               chr6:16316473-16316306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               231-402
               

               Cow position:
               chr6:35842814-35842645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               143, 26
               

               Conread position:
               231-403
               

               Cow position:
               chr6:21590865-21590690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               12, 134
               

               Conread position:
               231-404
               

               Cow position:
               chr6:38640390-38640215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               137, 164
               

               Conread position:
               231-404
               

               Cow position:
               chr6:60144041-60144215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               130, 163
               

               Conread position:
               231-405
               

               Cow position:
               chr6:8125483-8125308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               156, 140
               

               Conread position:
               231-405
               

               Cow position:
               chr6:10039880-10039705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr6:67187841-67187665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               98, 164
               

               Conread position:
               231-406
               

               Cow position:
               chr6:11169860-11169680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               12, 28
               

               Conread position:
               231-406
               

               Cow position:
               chr6:15300678-15300844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr6:47355979-47355801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               143, 56
               

               Conread position:
               231-407
               

               Cow position:
               chr6:3952675-3952499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               231-407
               

               Cow position:
               chr6:11246923-11246744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               231-407
               

               Cow position:
               chr6:16700408-16700246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr6:21235200-21235022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr6:34195992-34196169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               49, 163
               

               Conread position:
               231-407
               

               Cow position:
               chr6:35181100-35181279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               143, 124
               

               Conread position:
               231-407
               

               Cow position:
               chr6:47958969-47958793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 100
               

               Conread position:
               231-407
               

               Cow position:
               chr6:53932691-53932866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               95, 25
               

               Conread position:
               231-413
               

               Cow position:
               chr6:60516982-60516801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               143, 75
               

               Conread position:
               232-368
               

               Cow position:
               chr6:62079078-62078943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               232-371
               

               Cow position:
               chr6:63047748-63047609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-382
               

               Cow position:
               chr6:67805859-67806008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               232-403
               

               Cow position:
               chr6:5095386-5095562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               232-404
               

               Cow position:
               chr6:62056770-62056596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               141, 163
               

               Conread position:
               232-405
               

               Cow position:
               chr6:19681369-19681545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               232-405
               

               Cow position:
               chr6:55417372-55417544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               232-406
               

               Cow position:
               chr6:1429795-1429623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               232-406
               

               Cow position:
               chr6:28178799-28178967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               145, 73
               

               Conread position:
               232-407
               

               Cow position:
               chr6:17997164-17997335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr6:19446406-19446234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               66, 81
               

               Conread position:
               232-407
               

               Cow position:
               chr6:21514452-21514629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 26
               

               Conread position:
               232-407
               

               Cow position:
               chr6:28976884-28977063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr6:42565843-42565670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr6:52901394-52901215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr6:54867673-54867495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr6:65264389-65264557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 81
               

               Conread position:
               232-407
               

               Cow position:
               chr6:66375177-66375349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               233-377
               

               Cow position:
               chr6:23611092-23610953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               233-389
               

               Cow position:
               chr6:67456873-67456719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               233-406
               

               Cow position:
               chr6:25407237-25407408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               233-407
               

               Cow position:
               chr6:12669249-12669084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr6:51526643-51526473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr6:60442562-60442400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               234-400
               

               Cow position:
               chr6:6060418-6060581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr6:68685707-68685535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               140, 100
               

               Conread position:
               234-434
               

               Cow position:
               chr6:28483170-28482973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               71, 141
               

               Conread position:
               235-389
               

               Cow position:
               chr6:12270372-12270535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               61, 146
               

               Conread position:
               235-390
               

               Cow position:
               chr6:10224344-10224199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               235-403
               

               Cow position:
               chr6:1103587-1103752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               235-404
               

               Cow position:
               chr6:2899413-2899589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               235-405
               

               Cow position:
               chr6:143222-143389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               235-405
               

               Cow position:
               chr6:14949328-14949497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               235-406
               

               Cow position:
               chr6:17313886-17313716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               147, 47
               

               Conread position:
               235-406
               

               Cow position:
               chr6:19013216-19013050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               139, 63
               

               Conread position:
               235-406
               

               Cow position:
               chr6:21736740-21736906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               143, 26
               

               Conread position:
               235-407
               

               Cow position:
               chr6:9008459-9008630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr6:12845532-12845366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               235-407
               

               Cow position:
               chr6:24004689-24004522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr6:31564185-31564358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               152, 68
               

               Conread position:
               235-407
               

               Cow position:
               chr6:45064864-45065035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 70
               

               Conread position:
               235-407
               

               Cow position:
               chr6:57089356-57089177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr6:62670018-62669849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               235-408
               

               Cow position:
               chr6:36652574-36652399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               138, 26
               

               Conread position:
               236-331
               

               Cow position:
               chr6:36939019-36938924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-379
               

               Cow position:
               chr6:61168907-61168765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr6:5302268-5302435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr6:41655890-41656063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr6:48803487-48803655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               136, 48
               

               Conread position:
               237-383
               

               Cow position:
               chr6:60667561-60667418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               237-405
               

               Cow position:
               chr6:49002589-49002750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               133, 82
               

               Conread position:
               237-406
               

               Cow position:
               chr6:59301637-59301806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               104, 143
               

               Conread position:
               237-407
               

               Cow position:
               chr6:6673258-6673085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 142
               

               Conread position:
               238-387
               

               Cow position:
               chr6:32268738-32268881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               238-407
               

               Cow position:
               chr6:36470412-36470585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               238-407
               

               Cow position:
               chr6:37463172-37462999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               238-407
               

               Cow position:
               chr6:54490587-54490754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               145, 44
               

               Conread position:
               239-383
               

               Cow position:
               chr6:11137383-11137235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               239-404
               

               Cow position:
               chr6:13053946-13053778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               239-407
               

               Cow position:
               chr6:12338148-12337970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               242-393
               

               Cow position:
               chr6:36012048-36011901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               242-407
               

               Cow position:
               chr6:36645531-36645365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               132, 90
               

               Conread position:
               242-441
               

               Cow position:
               chr6:17548828-17549033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               132, 194
               

               Conread position:
               243-357
               

               Cow position:
               chr6:60516769-60516656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               243-375
               

               Cow position:
               chr6:28156018-28156146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               243-383
               

               Cow position:
               chr6:26450457-26450319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               243-386
               

               Cow position:
               chr6:24031521-24031381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               243-391
               

               Cow position:
               chr6:27888496-27888348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               243-400
               

               Cow position:
               chr6:47884885-47885034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr6:7119474-7119639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr6:7189974-7190138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               143, 116
               

               Conread position:
               244-400
               

               Cow position:
               chr6:48469143-48468987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               128, 10
               

               Conread position:
               244-406
               

               Cow position:
               chr6:4864403-4864566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr6:17527221-17527381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr6:65845988-65846145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               244-438
               

               Cow position:
               chr6:51893357-51893550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               165, 13
               

               Conread position:
               246-405
               

               Cow position:
               chr6:59718938-59718779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               116, 61
               

               Conread position:
               247-407
               

               Cow position:
               chr6:61142422-61142583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               91, 7
               

               Conread position:
               248-407
               

               Cow position:
               chr6:63272473-63272631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               126, 8
               

               Conread position:
               249-407
               

               Cow position:
               chr6:1770060-1770217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               251-406
               

               Cow position:
               chr6:33917702-33917860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               251-407
               

               Cow position:
               chr6:38614949-38614797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               123, 61
               

               Conread position:
               253-402
               

               Cow position:
               chr6:28318531-28318390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               82, 10
               

               Conread position:
               260-389
               

               Cow position:
               chr6:54368776-54368902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               263-407
               

               Cow position:
               chr6:12542805-12542952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               275-407
               

               Cow position:
               chr6:22502798-22502928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               275-407
               

               Cow position:
               chr6:54140910-54140777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               276-407
               

               Cow position:
               chr6:33347029-33346899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               295-405
               

               Cow position:
               chr6:57405032-57405140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               304-407
               

               Cow position:
               chr6:44984417-44984311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               65-411
               

               Cow position:
               chr7:24872767-24873118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               83-229
               

               Cow position:
               chr7:1804469-1804608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               140, 11
               

               Conread position:
               84-383
               

               Cow position:
               chr7:22651545-22651820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               225
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               19, 89
               

               Conread position:
               85-387
               

               Cow position:
               chr7:40074978-40074687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               86-204
               

               Cow position:
               chr7:31694372-31694490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 95
               

               Conread position:
               86-373
               

               Cow position:
               chr7:29709448-29709712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               16, 55
               

               Conread position:
               86-399
               

               Cow position:
               chr7:51320100-51319790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               87-426
               

               Cow position:
               chr7:36774659-36774330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 83
               

               Conread position:
               89-236
               

               Cow position:
               chr7:40952593-40952740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               97, 28
               

               Conread position:
               89-407
               

               Cow position:
               chr7:17817030-17816733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               89-407
               

               Cow position:
               chr7:42432131-42431812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               90, 63
               

               Conread position:
               90-407
               

               Cow position:
               chr7:9146944-9146627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 95
               

               Conread position:
               93-393
               

               Cow position:
               chr7:38603844-38604116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               94-191
               

               Cow position:
               chr7:9199909-9200008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               94-219
               

               Cow position:
               chr7:8292893-8293012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               94-315
               

               Cow position:
               chr7:3886867-3886641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               94-342
               

               Cow position:
               chr7:49656677-49656913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               94-391
               

               Cow position:
               chr7:39162654-39162372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               96, 63
               

               Conread position:
               96-192
               

               Cow position:
               chr7:58681776-58681870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               96-348
               

               Cow position:
               chr7:35754952-35754716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               57, 40
               

               Conread position:
               96-407
               

               Cow position:
               chr7:20176436-20176727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               287, 37
               

               Conread position:
               96-407
               

               Cow position:
               chr7:39518566-39518277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               278, 37
               

               Conread position:
               97-222
               

               Cow position:
               chr7:11855056-11854932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               89, 8
               

               Conread position:
               97-229
               

               Cow position:
               chr7:21544808-21544679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               89, 20
               

               Conread position:
               97-401
               

               Cow position:
               chr7:50858228-50857940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 67
               

               Conread position:
               99-407
               

               Cow position:
               chr7:45331820-45331522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               99-407
               

               Cow position:
               chr7:58923673-58923381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               100-195
               

               Cow position:
               chr7:40344635-40344729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               100-323
               

               Cow position:
               chr7:8088613-8088830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               148, 78
               

               Conread position:
               100-330
               

               Cow position:
               chr7:43214154-43214370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               101-406
               

               Cow position:
               chr7:15567039-15566733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 35
               

               Conread position:
               101-407
               

               Cow position:
               chr7:147690-147395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 77
               

               Conread position:
               102-350
               

               Cow position:
               chr7:5201384-5201637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               69, 133
               

               Conread position:
               102-406
               

               Cow position:
               chr7:27283953-27283667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               106-331
               

               Cow position:
               chr7:64235984-64236202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               106-388
               

               Cow position:
               chr7:6713817-6713521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 177
               

               Conread position:
               106-407
               

               Cow position:
               chr7:10550687-10550994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               180, 33
               

               Conread position:
               110-345
               

               Cow position:
               chr7:37141609-37141848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               116-277
               

               Cow position:
               chr7:38519815-38519965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               116-297
               

               Cow position:
               chr7:45656655-45656830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               116-407
               

               Cow position:
               chr7:23476740-23477052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 282
               

               Conread position:
               130-302
               

               Cow position:
               chr7:45738887-45738717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               115, 55
               

               Conread position:
               152-403
               

               Cow position:
               chr7:38082378-38082143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               229, 26
               

               Conread position:
               155-407
               

               Cow position:
               chr7:34554493-34554246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 103
               

               Conread position:
               160-366
               

               Cow position:
               chr7:25801917-25801708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 35
               

               Conread position:
               162-379
               

               Cow position:
               chr7:10886182-10885975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               57, 96
               

               Conread position:
               165-407
               

               Cow position:
               chr7:41464692-41464454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               167-331
               

               Cow position:
               chr7:3729480-3729314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               12, 44
               

               Conread position:
               167-403
               

               Cow position:
               chr7:45158340-45158108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               168-402
               

               Cow position:
               chr7:11011457-11011696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               23, 10
               

               Conread position:
               171-388
               

               Cow position:
               chr7:48563257-48563471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 143
               

               Conread position:
               171-407
               

               Cow position:
               chr7:20537584-20537346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               172-331
               

               Cow position:
               chr7:34005180-34005020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               178-372
               

               Cow position:
               chr7:34081987-34082194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               178-407
               

               Cow position:
               chr7:15739374-15739599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               29, 46
               

               Conread position:
               180-407
               

               Cow position:
               chr7:18947537-18947762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               184-396
               

               Cow position:
               chr7:52208838-52209049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               46, 91
               

               Conread position:
               186-384
               

               Cow position:
               chr7:57518281-57518082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               187-407
               

               Cow position:
               chr7:32915322-32915093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 215
               

               Conread position:
               187-407
               

               Cow position:
               chr7:64364323-64364545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               190-407
               

               Cow position:
               chr7:5199352-5199567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 34
               

               Conread position:
               191-324
               

               Cow position:
               chr7:1783013-1783151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               191-407
               

               Cow position:
               chr7:57258823-57259044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               192-407
               

               Cow position:
               chr7:28096065-28095855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               178, 14
               

               Conread position:
               193-407
               

               Cow position:
               chr7:34214786-34214578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               50, 27
               

               Conread position:
               194-380
               

               Cow position:
               chr7:9861575-9861754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               178, 22
               

               Conread position:
               194-388
               

               Cow position:
               chr7:1792249-1792447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               12, 63
               

               Conread position:
               194-407
               

               Cow position:
               chr7:24461144-24460940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-407
               

               Cow position:
               chr7:37952370-37952164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               195-389
               

               Cow position:
               chr7:3256151-3256347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               170, 11
               

               Conread position:
               195-405
               

               Cow position:
               chr7:9800548-9800339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               84, 11
               

               Conread position:
               195-407
               

               Cow position:
               chr7:26911244-26911456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               196-407
               

               Cow position:
               chr7:25511928-25512139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               10, 167
               

               Conread position:
               196-407
               

               Cow position:
               chr7:40952669-40952878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               24, 109
               

               Conread position:
               199-407
               

               Cow position:
               chr7:44986843-44986635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               173, 7
               

               Conread position:
               201-406
               

               Cow position:
               chr7:47776048-47775851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               203-407
               

               Cow position:
               chr7:42894638-42894429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               17, 89
               

               Conread position:
               204-407
               

               Cow position:
               chr7:44620811-44621011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               112, 73
               

               Conread position:
               205-404
               

               Cow position:
               chr7:11783249-11783444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               176, 64
               

               Conread position:
               205-405
               

               Cow position:
               chr7:53606150-53606339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr7:40067847-40067643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               29, 71
               

               Conread position:
               205-407
               

               Cow position:
               chr7:47698190-47697993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               162, 103
               

               Conread position:
               206-407
               

               Cow position:
               chr7:23936296-23936092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 150
               

               Conread position:
               206-421
               

               Cow position:
               chr7:30818646-30818424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               120, 24
               

               Conread position:
               208-407
               

               Cow position:
               chr7:4812192-4812004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 52
               

               Conread position:
               208-407
               

               Cow position:
               chr7:33720215-33720017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               165, 27
               

               Conread position:
               209-402
               

               Cow position:
               chr7:53697730-53697922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               182, 32
               

               Conread position:
               210-346
               

               Cow position:
               chr7:43450719-43450585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               210-407
               

               Cow position:
               chr7:14524660-14524463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               34, 162
               

               Conread position:
               212-371
               

               Cow position:
               chr7:9926555-9926713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               213-399
               

               Cow position:
               chr7:33698132-33697945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 63
               

               Conread position:
               214-348
               

               Cow position:
               chr7:30012007-30011873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               214-353
               

               Cow position:
               chr7:33810889-33810747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               214-378
               

               Cow position:
               chr7:14029484-14029324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               121, 9
               

               Conread position:
               214-407
               

               Cow position:
               chr7:39150127-39149925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               215-397
               

               Cow position:
               chr7:28563215-28563395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               215-407
               

               Cow position:
               chr7:39838701-39838896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               8, 111
               

               Conread position:
               216-348
               

               Cow position:
               chr7:17381627-17381497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr7:19230338-19230531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               7, 158
               

               Conread position:
               217-343
               

               Cow position:
               chr7:21573747-21573618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               217-378
               

               Cow position:
               chr7:10414960-10415122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               217-407
               

               Cow position:
               chr7:30017346-30017535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               129, 6
               

               Conread position:
               217-407
               

               Cow position:
               chr7:40303083-40303281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               53, 167
               

               Conread position:
               217-407
               

               Cow position:
               chr7:51019951-51019759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               217-415
               

               Cow position:
               chr7:39947077-39947271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               160
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               218-407
               

               Cow position:
               chr7:43484356-43484555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               218-407
               

               Cow position:
               chr7:48020601-48020404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               5, 170
               

               Conread position:
               219-350
               

               Cow position:
               chr7:39514404-39514273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               219-350
               

               Cow position:
               chr7:39516346-39516477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               219-407
               

               Cow position:
               chr7:67820285-67820098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               176, 8
               

               Conread position:
               220-407
               

               Cow position:
               chr7:38429540-38429728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               14, 153
               

               Conread position:
               221-339
               

               Cow position:
               chr7:31049423-31049541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               221-373
               

               Cow position:
               chr7:18247660-18247812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               221-376
               

               Cow position:
               chr7:19466082-19466237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               221-391
               

               Cow position:
               chr7:56556977-56557152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 83
               

               Conread position:
               221-406
               

               Cow position:
               chr7:40189719-40189538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               221-407
               

               Cow position:
               chr7:44596533-44596716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               153, 89
               

               Conread position:
               222-324
               

               Cow position:
               chr7:11511892-11511790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-331
               

               Cow position:
               chr7:7475945-7476054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-347
               

               Cow position:
               chr7:5906802-5906677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-354
               

               Cow position:
               chr7:40414829-40414961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-367
               

               Cow position:
               chr7:37023096-37022951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               222-379
               

               Cow position:
               chr7:9161507-9161665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               222-379
               

               Cow position:
               chr7:11015850-11015693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-379
               

               Cow position:
               chr7:26791675-26791519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-389
               

               Cow position:
               chr7:23089979-23090141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               132, 85
               

               Conread position:
               222-393
               

               Cow position:
               chr7:32807616-32807455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               222-400
               

               Cow position:
               chr7:65325587-65325764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               158, 101
               

               Conread position:
               222-402
               

               Cow position:
               chr7:23678097-23677916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               12, 150
               

               Conread position:
               222-405
               

               Cow position:
               chr7:27990509-27990695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr7:34974477-34974283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr7:36317348-36317167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               96, 9
               

               Conread position:
               222-406
               

               Cow position:
               chr7:40710296-40710106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               222-407
               

               Cow position:
               chr7:9137006-9136817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr7:11549830-11549648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               152, 9
               

               Conread position:
               222-407
               

               Cow position:
               chr7:23636870-23636690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               151
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr7:25393467-25393286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               52, 35
               

               Conread position:
               222-407
               

               Cow position:
               chr7:29505283-29505096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               153
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr7:31694470-31694653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 150
               

               Conread position:
               222-407
               

               Cow position:
               chr7:36248265-36248083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               152, 110
               

               Conread position:
               222-407
               

               Cow position:
               chr7:38060258-38060445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr7:38697010-38696831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr7:39416078-39415891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr7:41327866-41328057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr7:48721738-48721919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               157, 31
               

               Conread position:
               222-407
               

               Cow position:
               chr7:68857420-68857605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               222-441
               

               Cow position:
               chr7:30931809-30932025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               151, 98
               

               Conread position:
               222-441
               

               Cow position:
               chr7:37455486-37455271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               222-464
               

               Cow position:
               chr7:50494162-50493920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               152, 24
               

               Conread position:
               223-331
               

               Cow position:
               chr7:60121721-60121612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               223-352
               

               Cow position:
               chr7:13096146-13096017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-361
               

               Cow position:
               chr7:40744941-40744804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               223-378
               

               Cow position:
               chr7:35019137-35018981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-379
               

               Cow position:
               chr7:12494953-12495108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               223-379
               

               Cow position:
               chr7:41729136-41729291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               223-380
               

               Cow position:
               chr7:57506614-57506774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               223-381
               

               Cow position:
               chr7:43109373-43109529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               223-383
               

               Cow position:
               chr7:43085041-43084882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               150, 78
               

               Conread position:
               223-400
               

               Cow position:
               chr7:15755279-15755461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-401
               

               Cow position:
               chr7:53579224-53579403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 69
               

               Conread position:
               223-403
               

               Cow position:
               chr7:53053236-53053418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-405
               

               Cow position:
               chr7:52776592-52776771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               223-406
               

               Cow position:
               chr7:37697972-37697781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               223-406
               

               Cow position:
               chr7:41293579-41293763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               223-406
               

               Cow position:
               chr7:55316035-55316214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr7:16022462-16022278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr7:19797762-19797951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               138, 86
               

               Conread position:
               223-407
               

               Cow position:
               chr7:25263535-25263358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr7:35286473-35286654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr7:38361071-38361248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr7:46051824-46051638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               20, 172
               

               Conread position:
               223-407
               

               Cow position:
               chr7:46823837-46823653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr7:56347658-56347841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               50, 45
               

               Conread position:
               223-407
               

               Cow position:
               chr7:63946419-63946600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr7:67873360-67873174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-408
               

               Cow position:
               chr7:49636044-49636235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               223-408
               

               Cow position:
               chr7:49745629-49745438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               223-420
               

               Cow position:
               chr7:10397188-10397378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               223-447
               

               Cow position:
               chr7:25722499-25722725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               159, 119
               

               Conread position:
               224-381
               

               Cow position:
               chr7:59688704-59688555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               224-404
               

               Cow position:
               chr7:22793510-22793336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               224-406
               

               Cow position:
               chr7:4893024-4892846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               154, 11
               

               Conread position:
               224-407
               

               Cow position:
               chr7:50566035-50566216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               224-426
               

               Cow position:
               chr7:29345739-29345937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               90, 58
               

               Conread position:
               225-370
               

               Cow position:
               chr7:31523710-31523565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               225-398
               

               Cow position:
               chr7:9175642-9175467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               225-399
               

               Cow position:
               chr7:15559852-15559675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr7:39093762-39093944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               229-407
               

               Cow position:
               chr7:68315394-68315226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               230-407
               

               Cow position:
               chr7:19981685-19981861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               7, 142
               

               Conread position:
               231-337
               

               Cow position:
               chr7:11884122-11884228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-338
               

               Cow position:
               chr7:53996459-53996352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-344
               

               Cow position:
               chr7:10795992-10795879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-348
               

               Cow position:
               chr7:58329743-58329862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-350
               

               Cow position:
               chr7:30154847-30154966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-363
               

               Cow position:
               chr7:68240623-68240491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-367
               

               Cow position:
               chr7:51685173-51685037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-369
               

               Cow position:
               chr7:63300355-63300221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-369
               

               Cow position:
               chr7:68540441-68540579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-370
               

               Cow position:
               chr7:58862725-58862861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-374
               

               Cow position:
               chr7:35779901-35779758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-377
               

               Cow position:
               chr7:50166188-50166041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               231-381
               

               Cow position:
               chr7:11796743-11796893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-385
               

               Cow position:
               chr7:60153610-60153455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               231-388
               

               Cow position:
               chr7:36570022-36569860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr7:39168040-39167879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               231-391
               

               Cow position:
               chr7:9200263-9200421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               231-391
               

               Cow position:
               chr7:53653142-53652981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               231-399
               

               Cow position:
               chr7:28917250-28917079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr7:8089324-8089145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               66, 80
               

               Conread position:
               231-406
               

               Cow position:
               chr7:30155789-30155969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               231-406
               

               Cow position:
               chr7:59076009-59075830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr7:2172909-2172733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 153
               

               Conread position:
               231-407
               

               Cow position:
               chr7:2579078-2579253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr7:3336397-3336568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               162, 39
               

               Conread position:
               231-407
               

               Cow position:
               chr7:12357940-12358109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr7:14450484-14450324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr7:18388240-18388415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               231-407
               

               Cow position:
               chr7:25785998-25785820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr7:28441337-28441161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               150, 171
               

               Conread position:
               231-407
               

               Cow position:
               chr7:29682292-29682470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr7:40894701-40894524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               111, 141
               

               Conread position:
               231-407
               

               Cow position:
               chr7:47513526-47513704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               150, 60
               

               Conread position:
               231-457
               

               Cow position:
               chr7:53785819-53786043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               232-345
               

               Cow position:
               chr7:6271441-6271328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-359
               

               Cow position:
               chr7:4060422-4060295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               124, 22
               

               Conread position:
               232-366
               

               Cow position:
               chr7:58800326-58800193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               232-371
               

               Cow position:
               chr7:11513558-11513697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               232-390
               

               Cow position:
               chr7:2894884-2894724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               141, 100
               

               Conread position:
               232-390
               

               Cow position:
               chr7:59258487-59258642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               232-400
               

               Cow position:
               chr7:53989208-53989046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               147, 68
               

               Conread position:
               232-405
               

               Cow position:
               chr7:66894383-66894555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               145, 11
               

               Conread position:
               232-406
               

               Cow position:
               chr7:41346875-41347049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr7:34412120-34412290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr7:41745308-41745489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               141, 43
               

               Conread position:
               232-407
               

               Cow position:
               chr7:48406335-48406512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr7:61699535-61699713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 164
               

               Conread position:
               232-441
               

               Cow position:
               chr7:61790194-61790404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               155, 199
               

               Conread position:
               232-461
               

               Cow position:
               chr7:61601159-61601378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               141, 24
               

               Conread position:
               233-371
               

               Cow position:
               chr7:34464515-34464378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               233-376
               

               Cow position:
               chr7:8387257-8387400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-384
               

               Cow position:
               chr7:61731735-61731885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               233-391
               

               Cow position:
               chr7:33370549-33370390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               233-401
               

               Cow position:
               chr7:60121184-60121020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 137
               

               Conread position:
               233-404
               

               Cow position:
               chr7:10081550-10081715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               143, 10
               

               Conread position:
               233-405
               

               Cow position:
               chr7:1761888-1761710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               233-406
               

               Cow position:
               chr7:34433125-34433297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               233-407
               

               Cow position:
               chr7:9108618-9108444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               233-407
               

               Cow position:
               chr7:13067314-13067144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr7:23546765-23546587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               96, 24
               

               Conread position:
               233-407
               

               Cow position:
               chr7:33279840-33280010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               233-407
               

               Cow position:
               chr7:40308362-40308532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr7:45593185-45593023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr7:47931639-47931814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               233-426
               

               Cow position:
               chr7:57660007-57660200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               18, 139
               

               Conread position:
               233-451
               

               Cow position:
               chr7:7535695-7535474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               140, 13
               

               Conread position:
               234-377
               

               Cow position:
               chr7:52781810-52781953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               234-383
               

               Cow position:
               chr7:25867344-25867489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               234-399
               

               Cow position:
               chr7:23568580-23568747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               139, 92
               

               Conread position:
               234-407
               

               Cow position:
               chr7:17757191-17757022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 78
               

               Conread position:
               235-376
               

               Cow position:
               chr7:21713881-21714021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               235-378
               

               Cow position:
               chr7:11176574-11176716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               118, 76
               

               Conread position:
               235-386
               

               Cow position:
               chr7:14486229-14486081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               235-387
               

               Cow position:
               chr7:53661552-53661405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               107, 22
               

               Conread position:
               235-388
               

               Cow position:
               chr7:52517481-52517330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-405
               

               Cow position:
               chr7:1262184-1262012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               235-405
               

               Cow position:
               chr7:19414296-19414466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               146, 135
               

               Conread position:
               235-406
               

               Cow position:
               chr7:62953670-62953499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               57, 137
               

               Conread position:
               235-407
               

               Cow position:
               chr7:20564-20390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               151, 136
               

               Conread position:
               235-407
               

               Cow position:
               chr7:4129625-4129800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr7:13593923-13593750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               145, 75
               

               Conread position:
               235-407
               

               Cow position:
               chr7:36830806-36830639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr7:39129453-39129625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               139, 101
               

               Conread position:
               235-407
               

               Cow position:
               chr7:39823445-39823617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               235-407
               

               Cow position:
               chr7:44454124-44454295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 137
               

               Conread position:
               235-407
               

               Cow position:
               chr7:52758625-52758458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr7:54054741-54054571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               141, 19
               

               Conread position:
               235-407
               

               Cow position:
               chr7:58170894-58170722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr7:63112622-63112792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               137, 41
               

               Conread position:
               235-407
               

               Cow position:
               chr7:64572902-64573079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 19
               

               Conread position:
               235-444
               

               Cow position:
               chr7:52536098-52536311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               235-445
               

               Cow position:
               chr7:45747698-45747898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               174, 55
               

               Conread position:
               235-472
               

               Cow position:
               chr7:55693898-55694136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               137, 18
               

               Conread position:
               236-407
               

               Cow position:
               chr7:23464409-23464244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               134, 55
               

               Conread position:
               236-407
               

               Cow position:
               chr7:24220822-24220652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr7:33386076-33385905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               145, 139
               

               Conread position:
               237-350
               

               Cow position:
               chr7:16219733-16219844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               237-379
               

               Cow position:
               chr7:59689741-59689881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               136, 75
               

               Conread position:
               237-389
               

               Cow position:
               chr7:20918193-20918347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               67, 137
               

               Conread position:
               237-390
               

               Cow position:
               chr7:49648510-49648360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               137, 74
               

               Conread position:
               237-390
               

               Cow position:
               chr7:59843597-59843746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               237-407
               

               Cow position:
               chr7:33914124-33913952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               238-407
               

               Cow position:
               chr7:32079603-32079433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               135, 55
               

               Conread position:
               242-404
               

               Cow position:
               chr7:11066627-11066465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               130, 75
               

               Conread position:
               242-407
               

               Cow position:
               chr7:11948143-11948314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               242-413
               

               Cow position:
               chr7:24869500-24869667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               139, 27
               

               Conread position:
               242-441
               

               Cow position:
               chr7:51063437-51063240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               242-446
               

               Cow position:
               chr7:49630325-49630118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               243-376
               

               Cow position:
               chr7:57066662-57066794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr7:6058275-6058106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               243-428
               

               Cow position:
               chr7:37003955-37003781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               243-441
               

               Cow position:
               chr7:14519894-14520090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               129, 143
               

               Conread position:
               243-441
               

               Cow position:
               chr7:35893563-35893367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 36
               

               Conread position:
               243-445
               

               Cow position:
               chr7:69066843-69066643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               167, 133
               

               Conread position:
               244-407
               

               Cow position:
               chr7:7505980-7506151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr7:39451003-39451168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               129, 151
               

               Conread position:
               246-407
               

               Cow position:
               chr7:5212333-5212493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               134, 8
               

               Conread position:
               246-407
               

               Cow position:
               chr7:11869696-11869855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               124, 75
               

               Conread position:
               248-407
               

               Cow position:
               chr7:8868968-8868811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               79, 6
               

               Conread position:
               248-407
               

               Cow position:
               chr7:63679214-63679061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               249-379
               

               Cow position:
               chr7:39131359-39131488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               121, 8
               

               Conread position:
               249-405
               

               Cow position:
               chr7:9781584-9781739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               132, 9
               

               Conread position:
               251-367
               

               Cow position:
               chr7:41770244-41770360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               251-391
               

               Cow position:
               chr7:34771343-34771480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               251-407
               

               Cow position:
               chr7:3311978-3311827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               131, 78
               

               Conread position:
               252-407
               

               Cow position:
               chr7:3283497-3283347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               130, 77
               

               Conread position:
               253-400
               

               Cow position:
               chr7:56081733-56081585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               128, 141
               

               Conread position:
               253-407
               

               Cow position:
               chr7:23251429-23251579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               254-407
               

               Cow position:
               chr7:2896896-2896748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               119, 49
               

               Conread position:
               256-369
               

               Cow position:
               chr7:14499202-14499315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               256-406
               

               Cow position:
               chr7:37142239-37142384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               256-407
               

               Cow position:
               chr7:2884471-2884323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 56
               

               Conread position:
               261-406
               

               Cow position:
               chr7:59558048-59558188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               263-407
               

               Cow position:
               chr7:25960593-25960451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               270-396
               

               Cow position:
               chr7:45927045-45927170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               104, 80
               

               Conread position:
               271-404
               

               Cow position:
               chr7:19221686-19221551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               276-406
               

               Cow position:
               chr7:13218034-13218158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               283-407
               

               Cow position:
               chr7:34223801-34223674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               291-407
               

               Cow position:
               chr7:63016333-63016213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               294-407
               

               Cow position:
               chr7:51673483-51673594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               301-405
               

               Cow position:
               chr7:58953764-58953660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-405
               

               Cow position:
               chr7:18253576-18253487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               65-383
               

               Cow position:
               chr8:32197866-32198163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               229, 12
               

               Conread position:
               84-195
               

               Cow position:
               chr8:21600680-21600572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               85-385
               

               Cow position:
               chr8:38595957-38596246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               87-176
               

               Cow position:
               chr8:24419062-24419150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               87-407
               

               Cow position:
               chr8:21077835-21077539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               87-407
               

               Cow position:
               chr8:37882623-37882298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               27, 97
               

               Conread position:
               88-232
               

               Cow position:
               chr8:48010347-48010487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               88-407
               

               Cow position:
               chr8:49686949-49687267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               89-183
               

               Cow position:
               chr8:32243819-32243726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               89-375
               

               Cow position:
               chr8:53642171-53642450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 90
               

               Conread position:
               89-407
               

               Cow position:
               chr8:48956214-48955892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 16
               

               Conread position:
               94-391
               

               Cow position:
               chr8:32202029-32202333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               84, 277
               

               Conread position:
               94-407
               

               Cow position:
               chr8:5224801-5225087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               95-289
               

               Cow position:
               chr8:37581634-37581813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               95-347
               

               Cow position:
               chr8:22999882-22999623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               83, 165
               

               Conread position:
               95-380
               

               Cow position:
               chr8:9468585-9468326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               216
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               74, 85
               

               Conread position:
               95-407
               

               Cow position:
               chr8:39173988-39174294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 69
               

               Conread position:
               96-399
               

               Cow position:
               chr8:22314628-22314301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 178
               

               Conread position:
               96-411
               

               Cow position:
               chr8:18647100-18647414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 37
               

               Conread position:
               97-316
               

               Cow position:
               chr8:19997779-19997982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               97-407
               

               Cow position:
               chr8:7661618-7661310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               219, 31
               

               Conread position:
               98-204
               

               Cow position:
               chr8:41905406-41905508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               98-204
               

               Cow position:
               chr8:41914314-41914416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               98-268
               

               Cow position:
               chr8:51473266-51473097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 81
               

               Conread position:
               98-407
               

               Cow position:
               chr8:50938054-50937736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               71, 38
               

               Conread position:
               99-213
               

               Cow position:
               chr8:57068875-57068988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               72, 7
               

               Conread position:
               99-351
               

               Cow position:
               chr8:55503043-55502792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               124, 6
               

               Conread position:
               99-440
               

               Cow position:
               chr8:45127436-45127781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 279
               

               Conread position:
               100-177
               

               Cow position:
               chr8:38711799-38711722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               78
               

               Alignm identity:
               73
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               101-338
               

               Cow position:
               chr8:51480351-51480591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               85, 38
               

               Conread position:
               101-379
               

               Cow position:
               chr8:24428536-24428827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               78, 201
               

               Conread position:
               101-407
               

               Cow position:
               chr8:26304154-26304437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               102-369
               

               Cow position:
               chr8:56181252-56181523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               90, 218
               

               Conread position:
               102-407
               

               Cow position:
               chr8:47501062-47500753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               121, 74
               

               Conread position:
               105-339
               

               Cow position:
               chr8:11148403-11148620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               105-406
               

               Cow position:
               chr8:15219388-15219111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               146, 66
               

               Conread position:
               106-407
               

               Cow position:
               chr8:20837358-20837077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 72
               

               Conread position:
               106-407
               

               Cow position:
               chr8:24471936-24471602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 174
               

               Conread position:
               107-385
               

               Cow position:
               chr8:44847864-44847587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               108-407
               

               Cow position:
               chr8:21382453-21382741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               265, 17
               

               Conread position:
               116-222
               

               Cow position:
               chr8:36719037-36718931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               116-384
               

               Cow position:
               chr8:36490090-36489845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               132, 24
               

               Conread position:
               118-335
               

               Cow position:
               chr8:47221363-47221566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 57
               

               Conread position:
               122-406
               

               Cow position:
               chr8:23179305-23179591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               123-407
               

               Cow position:
               chr8:21083050-21083338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               57, 66
               

               Conread position:
               131-345
               

               Cow position:
               chr8:14109619-14109404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               137-407
               

               Cow position:
               chr8:34042661-34042404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               154-407
               

               Cow position:
               chr8:34774700-34774450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               157-329
               

               Cow position:
               chr8:60585019-60585187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               6, 22
               

               Conread position:
               161-441
               

               Cow position:
               chr8:11079061-11078789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               165-366
               

               Cow position:
               chr8:47969089-47969287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               53, 41
               

               Conread position:
               168-377
               

               Cow position:
               chr8:31762728-31762523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               168-407
               

               Cow position:
               chr8:50335332-50335571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               170-406
               

               Cow position:
               chr8:1394419-1394181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               76, 8
               

               Conread position:
               171-407
               

               Cow position:
               chr8:17167758-17167517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               171-407
               

               Cow position:
               chr8:60455375-60455141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               175-348
               

               Cow position:
               chr8:50282063-50281888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 21
               

               Conread position:
               176-407
               

               Cow position:
               chr8:53429959-53429726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               177-377
               

               Cow position:
               chr8:47462046-47461839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               188-379
               

               Cow position:
               chr8:51162366-51162555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               188-380
               

               Cow position:
               chr8:51208955-51208760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               188-407
               

               Cow position:
               chr8:20157591-20157813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               188-407
               

               Cow position:
               chr8:47664736-47664953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               189-407
               

               Cow position:
               chr8:58377415-58377615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               191-407
               

               Cow position:
               chr8:6616624-6616840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               192-372
               

               Cow position:
               chr8:53360076-53360252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               192-380
               

               Cow position:
               chr8:35504074-35504250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               194-349
               

               Cow position:
               chr8:5546301-5546148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-393
               

               Cow position:
               chr8:26600930-26600732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 121
               

               Conread position:
               194-407
               

               Cow position:
               chr8:45287133-45287337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               12, 106
               

               Conread position:
               195-407
               

               Cow position:
               chr8:57208312-57208524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               195-407
               

               Cow position:
               chr8:60485373-60485160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 179
               

               Conread position:
               196-406
               

               Cow position:
               chr8:12795988-12795776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               196-406
               

               Cow position:
               chr8:24328700-24328901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               176, 10
               

               Conread position:
               198-407
               

               Cow position:
               chr8:19011632-19011843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               201-347
               

               Cow position:
               chr8:35555167-35555312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               5, 30
               

               Conread position:
               205-386
               

               Cow position:
               chr8:21069819-21070001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 132
               

               Conread position:
               205-390
               

               Cow position:
               chr8:21858567-21858742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               205-405
               

               Cow position:
               chr8:669412-669610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr8:25388291-25388094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               205-407
               

               Cow position:
               chr8:46235849-46235653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               206-356
               

               Cow position:
               chr8:60595006-60594857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               206-384
               

               Cow position:
               chr8:10846391-10846216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               206-404
               

               Cow position:
               chr8:45126085-45126283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               168, 14
               

               Conread position:
               206-407
               

               Cow position:
               chr8:2774937-2774737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               44, 25
               

               Conread position:
               206-407
               

               Cow position:
               chr8:48482659-48482865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               207-407
               

               Cow position:
               chr8:36672069-36671867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               111, 17
               

               Conread position:
               207-407
               

               Cow position:
               chr8:37347301-37347506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               207-407
               

               Cow position:
               chr8:40579263-40579460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               210-407
               

               Cow position:
               chr8:11606476-11606280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               10, 34
               

               Conread position:
               211-407
               

               Cow position:
               chr8:38852237-38852036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               25, 12
               

               Conread position:
               212-407
               

               Cow position:
               chr8:6194125-6193922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               214-390
               

               Cow position:
               chr8:1526594-1526769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 9
               

               Conread position:
               214-425
               

               Cow position:
               chr8:31265764-31265970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               9, 107
               

               Conread position:
               215-407
               

               Cow position:
               chr8:19860527-19860707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               216-370
               

               Cow position:
               chr8:35497541-35497691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-379
               

               Cow position:
               chr8:28210127-28209962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-383
               

               Cow position:
               chr8:33125639-33125473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               7, 97
               

               Conread position:
               216-426
               

               Cow position:
               chr8:27138650-27138861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               7, 44
               

               Conread position:
               217-406
               

               Cow position:
               chr8:29958541-29958355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               7, 91
               

               Conread position:
               217-407
               

               Cow position:
               chr8:5894082-5893895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 25
               

               Conread position:
               218-407
               

               Cow position:
               chr8:5437906-5437713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               218-407
               

               Cow position:
               chr8:23585818-23586002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               218-407
               

               Cow position:
               chr8:30324464-30324267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               5, 37
               

               Conread position:
               218-407
               

               Cow position:
               chr8:61443074-61443264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               219-406
               

               Cow position:
               chr8:3891288-3891477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               143, 11
               

               Conread position:
               219-406
               

               Cow position:
               chr8:54328591-54328398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               88, 6
               

               Conread position:
               219-407
               

               Cow position:
               chr8:36823065-36823255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               5, 40
               

               Conread position:
               220-397
               

               Cow position:
               chr8:60488493-60488661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               108, 15
               

               Conread position:
               221-347
               

               Cow position:
               chr8:24767273-24767395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               221-406
               

               Cow position:
               chr8:43112706-43112891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               17, 152
               

               Conread position:
               221-407
               

               Cow position:
               chr8:573017-573203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               113, 156
               

               Conread position:
               221-407
               

               Cow position:
               chr8:36375377-36375564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr8:53633085-53633275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               221-450
               

               Cow position:
               chr8:43163564-43163789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               30, 190
               

               Conread position:
               222-331
               

               Cow position:
               chr8:18757158-18757049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-344
               

               Cow position:
               chr8:54546729-54546606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               222-359
               

               Cow position:
               chr8:37443666-37443532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               222-361
               

               Cow position:
               chr8:48555522-48555658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               222-372
               

               Cow position:
               chr8:35580498-35580648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-376
               

               Cow position:
               chr8:43153553-43153706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               222-381
               

               Cow position:
               chr8:39782733-39782573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               222-382
               

               Cow position:
               chr8:33805660-33805503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               222-382
               

               Cow position:
               chr8:47248726-47248558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               222-383
               

               Cow position:
               chr8:53965340-53965502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               222-385
               

               Cow position:
               chr8:29964993-29964832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               222-385
               

               Cow position:
               chr8:55348470-55348309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               148, 18
               

               Conread position:
               222-399
               

               Cow position:
               chr8:59766732-59766558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               151, 90
               

               Conread position:
               222-403
               

               Cow position:
               chr8:8189922-8190110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               222-404
               

               Cow position:
               chr8:4525218-4525039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               164, 149
               

               Conread position:
               222-404
               

               Cow position:
               chr8:58393699-58393516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-405
               

               Cow position:
               chr8:20783127-20783310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               222-405
               

               Cow position:
               chr8:21600583-21600401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr8:8323733-8323916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-406
               

               Cow position:
               chr8:25133710-25133527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr8:4500630-4500444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               152
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               13, 26
               

               Conread position:
               222-407
               

               Cow position:
               chr8:7149564-7149742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               158, 68
               

               Conread position:
               222-407
               

               Cow position:
               chr8:18730586-18730397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr8:19204309-19204496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               222-407
               

               Cow position:
               chr8:19857835-19858023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr8:41219465-41219277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr8:43439748-43439561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               152, 87
               

               Conread position:
               222-407
               

               Cow position:
               chr8:45859945-45859760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               157, 149
               

               Conread position:
               222-407
               

               Cow position:
               chr8:47283937-47284117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr8:49305614-49305798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               140, 13
               

               Conread position:
               223-350
               

               Cow position:
               chr8:11216719-11216846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-369
               

               Cow position:
               chr8:20327719-20327860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               223-371
               

               Cow position:
               chr8:26009017-26008869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               223-378
               

               Cow position:
               chr8:20409822-20409669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               223-378
               

               Cow position:
               chr8:34402431-34402276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-389
               

               Cow position:
               chr8:676179-676345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               17, 149
               

               Conread position:
               223-393
               

               Cow position:
               chr8:34035812-34035634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 35
               

               Conread position:
               223-397
               

               Cow position:
               chr8:4992683-4992515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               151, 12
               

               Conread position:
               223-403
               

               Cow position:
               chr8:13321499-13321664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               223-403
               

               Cow position:
               chr8:42762295-42762475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               150, 170
               

               Conread position:
               223-403
               

               Cow position:
               chr8:53606385-53606563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 46
               

               Conread position:
               223-405
               

               Cow position:
               chr8:13454488-13454669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               139, 169
               

               Conread position:
               223-405
               

               Cow position:
               chr8:17199297-17199479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               150, 34
               

               Conread position:
               223-406
               

               Cow position:
               chr8:27731173-27730991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               223-406
               

               Cow position:
               chr8:55716888-55716705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               150, 89
               

               Conread position:
               223-407
               

               Cow position:
               chr8:1188052-1187871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               159, 58
               

               Conread position:
               223-407
               

               Cow position:
               chr8:1297646-1297463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr8:9509759-9509940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               144, 33
               

               Conread position:
               223-407
               

               Cow position:
               chr8:11277966-11278155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               223-407
               

               Cow position:
               chr8:11612686-11612500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-407
               

               Cow position:
               chr8:16144266-16144080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               223-407
               

               Cow position:
               chr8:16413677-16413857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               20, 89
               

               Conread position:
               223-407
               

               Cow position:
               chr8:17179899-17180079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr8:20307111-20306929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr8:20926495-20926688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr8:21911772-21911590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               153
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr8:39487502-39487684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr8:52968174-52968356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr8:55070853-55070664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr8:55096005-55095831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               151, 66
               

               Conread position:
               223-407
               

               Cow position:
               chr8:61845415-61845605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               100, 12
               

               Conread position:
               224-331
               

               Cow position:
               chr8:36034832-36034940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               224-338
               

               Cow position:
               chr8:21776056-21775942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-345
               

               Cow position:
               chr8:8283165-8283286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-345
               

               Cow position:
               chr8:11003665-11003786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-381
               

               Cow position:
               chr8:51511722-51511873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               224-406
               

               Cow position:
               chr8:57218936-57218758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr8:15391024-15391210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               146, 96
               

               Conread position:
               224-407
               

               Cow position:
               chr8:26626003-26625824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr8:29026506-29026682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               224-407
               

               Cow position:
               chr8:58417817-58417639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               158, 88
               

               Conread position:
               224-449
               

               Cow position:
               chr8:49659262-49659043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               185, 29
               

               Conread position:
               225-405
               

               Cow position:
               chr8:43942863-43942685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               225-406
               

               Cow position:
               chr8:3445960-3446145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               44, 165
               

               Conread position:
               225-406
               

               Cow position:
               chr8:38711726-38711553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               174, 10
               

               Conread position:
               225-407
               

               Cow position:
               chr8:24390062-24390246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               69, 128
               

               Conread position:
               225-445
               

               Cow position:
               chr8:1012111-1011895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               149, 15
               

               Conread position:
               226-402
               

               Cow position:
               chr8:47135884-47136054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               145, 17
               

               Conread position:
               226-407
               

               Cow position:
               chr8:35185865-35185695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               226-407
               

               Cow position:
               chr8:37862702-37862531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               226-447
               

               Cow position:
               chr8:44557907-44558130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               152, 75
               

               Conread position:
               228-403
               

               Cow position:
               chr8:45244900-45245076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               228-407
               

               Cow position:
               chr8:10336907-10337086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               146, 165
               

               Conread position:
               228-407
               

               Cow position:
               chr8:13723537-13723361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               229-445
               

               Cow position:
               chr8:30463528-30463307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 189
               

               Conread position:
               231-351
               

               Cow position:
               chr8:24419149-24419269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-352
               

               Cow position:
               chr8:3762276-3762155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-359
               

               Cow position:
               chr8:38811430-38811303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               231-364
               

               Cow position:
               chr8:55194301-55194168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-369
               

               Cow position:
               chr8:5884563-5884701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-369
               

               Cow position:
               chr8:19784987-19784852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 81
               

               Conread position:
               231-370
               

               Cow position:
               chr8:31166979-31167116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               231-371
               

               Cow position:
               chr8:33926285-33926140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               231-372
               

               Cow position:
               chr8:1114685-1114822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr8:32192818-32192677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr8:40697002-40696864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               139, 89
               

               Conread position:
               231-381
               

               Cow position:
               chr8:48086478-48086627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr8:16061196-16061049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               140, 79
               

               Conread position:
               231-383
               

               Cow position:
               chr8:20582560-20582711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-386
               

               Cow position:
               chr8:1169158-1169310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 62
               

               Conread position:
               231-389
               

               Cow position:
               chr8:39590362-39590202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               231-390
               

               Cow position:
               chr8:45925744-45925588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-394
               

               Cow position:
               chr8:37275885-37275726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               231-398
               

               Cow position:
               chr8:46964863-46964698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-400
               

               Cow position:
               chr8:28884965-28884784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               102, 153
               

               Conread position:
               231-403
               

               Cow position:
               chr8:42794194-42794362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               231-404
               

               Cow position:
               chr8:32278221-32278395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               147, 63
               

               Conread position:
               231-405
               

               Cow position:
               chr8:1620598-1620776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               231-405
               

               Cow position:
               chr8:3673495-3673324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               143, 80
               

               Conread position:
               231-405
               

               Cow position:
               chr8:5477723-5477903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr8:41722066-41722230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               231-406
               

               Cow position:
               chr8:12058850-12058676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               141, 56
               

               Conread position:
               231-407
               

               Cow position:
               chr8:642449-642623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               143, 69
               

               Conread position:
               231-407
               

               Cow position:
               chr8:2968704-2968541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr8:4940191-4940357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               231-407
               

               Cow position:
               chr8:6232764-6232946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr8:12799047-12798867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr8:18081661-18081489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr8:20339403-20339236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr8:21826610-21826800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               114, 59
               

               Conread position:
               231-407
               

               Cow position:
               chr8:25455533-25455359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr8:31297400-31297219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 167
               

               Conread position:
               231-407
               

               Cow position:
               chr8:38861574-38861749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr8:49656303-49656474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr8:54032007-54031826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               142, 88
               

               Conread position:
               231-407
               

               Cow position:
               chr8:61128568-61128744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 142
               

               Conread position:
               231-408
               

               Cow position:
               chr8:22575765-22575939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               143, 58
               

               Conread position:
               231-447
               

               Cow position:
               chr8:35583439-35583647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               206, 22
               

               Conread position:
               232-379
               

               Cow position:
               chr8:61738461-61738312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               129, 15
               

               Conread position:
               232-390
               

               Cow position:
               chr8:26608398-26608240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               139, 57
               

               Conread position:
               232-406
               

               Cow position:
               chr8:43167901-43168078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr8:8097140-8097312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr8:9942400-9942573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               232-407
               

               Cow position:
               chr8:16505618-16505445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               142, 80
               

               Conread position:
               232-407
               

               Cow position:
               chr8:42145649-42145826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               142, 25
               

               Conread position:
               232-407
               

               Cow position:
               chr8:50310724-50310902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               98, 170
               

               Conread position:
               232-407
               

               Cow position:
               chr8:53552802-53552630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr8:61669443-61669267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               152, 137
               

               Conread position:
               232-447
               

               Cow position:
               chr8:53251576-53251791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               139, 164
               

               Conread position:
               233-371
               

               Cow position:
               chr8:28378641-28378779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-372
               

               Cow position:
               chr8:55853459-55853323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               233-380
               

               Cow position:
               chr8:25554703-25554850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-382
               

               Cow position:
               chr8:15426869-15426723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               233-387
               

               Cow position:
               chr8:53927890-53928044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               91, 74
               

               Conread position:
               233-388
               

               Cow position:
               chr8:8668061-8668216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr8:1999755-1999573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               233-407
               

               Cow position:
               chr8:9168692-9168865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               233-407
               

               Cow position:
               chr8:18207017-18207182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               147, 79
               

               Conread position:
               233-407
               

               Cow position:
               chr8:39592714-39592539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               233-422
               

               Cow position:
               chr8:24870683-24870871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               141, 24
               

               Conread position:
               233-440
               

               Cow position:
               chr8:18017644-18017438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               234-380
               

               Cow position:
               chr8:29949871-29949735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               234-406
               

               Cow position:
               chr8:46743191-46743362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               140, 96
               

               Conread position:
               234-407
               

               Cow position:
               chr8:1024084-1023917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr8:19698765-19698597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr8:37571579-37571751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               234-448
               

               Cow position:
               chr8:11864075-11863862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               235-367
               

               Cow position:
               chr8:11594161-11594029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-376
               

               Cow position:
               chr8:53492453-53492316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               126, 39
               

               Conread position:
               235-379
               

               Cow position:
               chr8:37123089-37122945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-389
               

               Cow position:
               chr8:46952639-46952485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               235-390
               

               Cow position:
               chr8:45879158-45879006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               235-405
               

               Cow position:
               chr8:18033797-18033971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 59
               

               Conread position:
               235-405
               

               Cow position:
               chr8:60575935-60576099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               235-406
               

               Cow position:
               chr8:537789-537964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               235-406
               

               Cow position:
               chr8:39845738-39845572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               235-406
               

               Cow position:
               chr8:40143728-40143900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               139, 159
               

               Conread position:
               235-407
               

               Cow position:
               chr8:6665429-6665599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               235-407
               

               Cow position:
               chr8:9050916-9051082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr8:37709274-37709102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr8:39969697-39969871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr8:53383528-53383351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               98, 133
               

               Conread position:
               235-407
               

               Cow position:
               chr8:54177591-54177761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr8:55900902-55901075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               135, 83
               

               Conread position:
               236-405
               

               Cow position:
               chr8:37334288-37334125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               138, 39
               

               Conread position:
               236-406
               

               Cow position:
               chr8:48512890-48513055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr8:3704745-3704572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               132, 20
               

               Conread position:
               236-407
               

               Cow position:
               chr8:58520417-58520244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               144
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               236-443
               

               Cow position:
               chr8:20657239-20657446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               138, 194
               

               Conread position:
               237-372
               

               Cow position:
               chr8:36829732-36829867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               237-381
               

               Cow position:
               chr8:3795946-3795803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               133, 48
               

               Conread position:
               237-383
               

               Cow position:
               chr8:36718683-36718536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               237-385
               

               Cow position:
               chr8:60478514-60478652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               237-407
               

               Cow position:
               chr8:17247346-17247180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               237-407
               

               Cow position:
               chr8:55974694-55974864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               136, 105
               

               Conread position:
               238-348
               

               Cow position:
               chr8:5484452-5484562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               239-369
               

               Cow position:
               chr8:3593779-3593649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               239-407
               

               Cow position:
               chr8:4552628-4552800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               242-372
               

               Cow position:
               chr8:32495189-32495065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               242-383
               

               Cow position:
               chr8:37291973-37292113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               242-407
               

               Cow position:
               chr8:28228362-28228200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               243-373
               

               Cow position:
               chr8:40633753-40633881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               243-402
               

               Cow position:
               chr8:18057862-18057709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               101, 96
               

               Conread position:
               243-406
               

               Cow position:
               chr8:2163790-2163949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               137, 11
               

               Conread position:
               244-407
               

               Cow position:
               chr8:8915843-8916003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               130, 26
               

               Conread position:
               244-407
               

               Cow position:
               chr8:10263050-10263214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr8:19642583-19642423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               245-405
               

               Cow position:
               chr8:56886424-56886263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               6, 13
               

               Conread position:
               250-407
               

               Cow position:
               chr8:30892893-30893054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               252-407
               

               Cow position:
               chr8:13813316-13813473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               254-406
               

               Cow position:
               chr8:34171980-34171829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               257-407
               

               Cow position:
               chr8:50735924-50735773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               258-407
               

               Cow position:
               chr8:22756121-22755968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               97, 51
               

               Conread position:
               261-407
               

               Cow position:
               chr8:20684070-20683922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               265-407
               

               Cow position:
               chr8:14947202-14947344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               279-389
               

               Cow position:
               chr8:31762741-31762854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               279-406
               

               Cow position:
               chr8:10297657-10297781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               297-451
               

               Cow position:
               chr8:28961682-28961527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               76, 97
               

               Conread position:
               75-361
               

               Cow position:
               chr9:1733096-1733386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               32, 106
               

               Conread position:
               76-343
               

               Cow position:
               chr9:44467567-44467315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               27, 103
               

               Conread position:
               82-407
               

               Cow position:
               chr9:55084524-55084210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 88
               

               Conread position:
               83-308
               

               Cow position:
               chr9:20330003-20329793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 58
               

               Conread position:
               83-405
               

               Cow position:
               chr9:59387000-59386683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 51
               

               Conread position:
               84-407
               

               Cow position:
               chr9:38941663-38941344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               98, 47
               

               Conread position:
               86-175
               

               Cow position:
               chr9:16770804-16770893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               77
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               86-341
               

               Cow position:
               chr9:58404665-58404405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               87-337
               

               Cow position:
               chr9:50540927-50540684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               88-337
               

               Cow position:
               chr9:45454857-45455093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               88-365
               

               Cow position:
               chr9:16137563-16137296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               9, 84
               

               Conread position:
               89-184
               

               Cow position:
               chr9:28156517-28156613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               89-385
               

               Cow position:
               chr9:20389362-20389070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 89
               

               Conread position:
               89-407
               

               Cow position:
               chr9:17310811-17310475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               89-407
               

               Cow position:
               chr9:64050781-64050473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               285, 17
               

               Conread position:
               92-407
               

               Cow position:
               chr9:9502872-9503167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               93-199
               

               Cow position:
               chr9:33597794-33597899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 85
               

               Conread position:
               94-175
               

               Cow position:
               chr9:14738074-14738155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               82
               

               Alignm identity:
               73
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-338
               

               Cow position:
               chr9:36634973-36634744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-353
               

               Cow position:
               chr9:34065771-34065514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 88
               

               Conread position:
               94-359
               

               Cow position:
               chr9:53413457-53413198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               94-383
               

               Cow position:
               chr9:46664616-46664890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               174, 71
               

               Conread position:
               94-400
               

               Cow position:
               chr9:17518701-17518408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-405
               

               Cow position:
               chr9:28686176-28686478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 73
               

               Conread position:
               94-407
               

               Cow position:
               chr9:3738441-3738134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               272, 11
               

               Conread position:
               94-407
               

               Cow position:
               chr9:28378735-28379056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 242
               

               Conread position:
               95-331
               

               Cow position:
               chr9:23403614-23403830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               95-407
               

               Cow position:
               chr9:7362827-7363112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               178, 10
               

               Conread position:
               96-183
               

               Cow position:
               chr9:61019541-61019453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               77
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               96-226
               

               Cow position:
               chr9:36849453-36849582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               100, 82
               

               Conread position:
               96-346
               

               Cow position:
               chr9:1909829-1909587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               96-407
               

               Cow position:
               chr9:1972717-1973029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 224
               

               Conread position:
               97-218
               

               Cow position:
               chr9:2927573-2927693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               89, 59
               

               Conread position:
               97-312
               

               Cow position:
               chr9:49225200-49225397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               97-407
               

               Cow position:
               chr9:31638878-31638554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 82
               

               Conread position:
               98-330
               

               Cow position:
               chr9:44130017-44130261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               17, 229
               

               Conread position:
               99-383
               

               Cow position:
               chr9:8976609-8976350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               28, 81
               

               Conread position:
               100-226
               

               Cow position:
               chr9:50074997-50075121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               100-441
               

               Cow position:
               chr9:22696002-22696341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               101-331
               

               Cow position:
               chr9:46189944-46190154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               101-365
               

               Cow position:
               chr9:24243932-24243675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 70
               

               Conread position:
               101-379
               

               Cow position:
               chr9:34888508-34888238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 79
               

               Conread position:
               101-441
               

               Cow position:
               chr9:39681130-39681460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 77
               

               Conread position:
               102-331
               

               Cow position:
               chr9:31354286-31354059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               84, 15
               

               Conread position:
               105-331
               

               Cow position:
               chr9:8122281-8122498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               131, 73
               

               Conread position:
               105-372
               

               Cow position:
               chr9:5073028-5072785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               106-381
               

               Cow position:
               chr9:36445403-36445681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 73
               

               Conread position:
               106-407
               

               Cow position:
               chr9:7634056-7634361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               87, 34
               

               Conread position:
               106-407
               

               Cow position:
               chr9:62668051-62668341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 10
               

               Conread position:
               107-327
               

               Cow position:
               chr9:41716229-41716449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 71
               

               Conread position:
               107-407
               

               Cow position:
               chr9:8288421-8288705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               107-431
               

               Cow position:
               chr9:33092745-33093064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               114-407
               

               Cow position:
               chr9:35105992-35105702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 38
               

               Conread position:
               116-289
               

               Cow position:
               chr9:9517830-9518003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               116-388
               

               Cow position:
               chr9:9406256-9405984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               118-407
               

               Cow position:
               chr9:3773957-3774248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 188
               

               Conread position:
               120-330
               

               Cow position:
               chr9:31270303-31270503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               164, 13
               

               Conread position:
               129-407
               

               Cow position:
               chr9:62442101-62442378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               54, 48
               

               Conread position:
               134-407
               

               Cow position:
               chr9:11313697-11313424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 64
               

               Conread position:
               137-407
               

               Cow position:
               chr9:8534882-8534601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               34, 91
               

               Conread position:
               143-331
               

               Cow position:
               chr9:31345320-31345512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               148-383
               

               Cow position:
               chr9:16300734-16300504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               156-310
               

               Cow position:
               chr9:29578108-29578272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               157-407
               

               Cow position:
               chr9:43443643-43443889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               6, 17
               

               Conread position:
               162-390
               

               Cow position:
               chr9:24429252-24429023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 56
               

               Conread position:
               162-407
               

               Cow position:
               chr9:9443756-9443516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               165-402
               

               Cow position:
               chr9:11304223-11303997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               165-407
               

               Cow position:
               chr9:1520898-1520650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               41, 93
               

               Conread position:
               166-370
               

               Cow position:
               chr9:25627925-25628135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               13, 196
               

               Conread position:
               166-407
               

               Cow position:
               chr9:4268140-4267896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               35, 5
               

               Conread position:
               168-368
               

               Cow position:
               chr9:54051625-54051823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               171-348
               

               Cow position:
               chr9:34135571-34135745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               171-406
               

               Cow position:
               chr9:55532662-55532902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               171-407
               

               Cow position:
               chr9:8337882-8338116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               199, 25
               

               Conread position:
               176-400
               

               Cow position:
               chr9:47868871-47869091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               176-407
               

               Cow position:
               chr9:17411335-17411104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               178-385
               

               Cow position:
               chr9:3379000-3379205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 89
               

               Conread position:
               180-385
               

               Cow position:
               chr9:39758379-39758583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               182-407
               

               Cow position:
               chr9:54528376-54528599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               187-407
               

               Cow position:
               chr9:18217229-18217012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               188-433
               

               Cow position:
               chr9:58426010-58425774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               189-384
               

               Cow position:
               chr9:31814520-31814320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               191-345
               

               Cow position:
               chr9:3847277-3847428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               191-391
               

               Cow position:
               chr9:64064487-64064291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               191-407
               

               Cow position:
               chr9:10819956-10819745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               191-407
               

               Cow position:
               chr9:47906406-47906189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               111, 15
               

               Conread position:
               193-361
               

               Cow position:
               chr9:55354486-55354653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               194-328
               

               Cow position:
               chr9:22375057-22375183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               194-383
               

               Cow position:
               chr9:50081166-50080976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-396
               

               Cow position:
               chr9:52513571-52513370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               162
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               187, 13
               

               Conread position:
               194-398
               

               Cow position:
               chr9:8562700-8562899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-407
               

               Cow position:
               chr9:26310378-26310596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               195-366
               

               Cow position:
               chr9:34014374-34014202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               195-406
               

               Cow position:
               chr9:50543548-50543336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               12, 36
               

               Conread position:
               197-331
               

               Cow position:
               chr9:33681538-33681671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               197-383
               

               Cow position:
               chr9:26859232-26859414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 19
               

               Conread position:
               197-407
               

               Cow position:
               chr9:5509604-5509811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               197-407
               

               Cow position:
               chr9:33940487-33940692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               198-376
               

               Cow position:
               chr9:23264874-23265048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               199-378
               

               Cow position:
               chr9:36843674-36843855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               133, 7
               

               Conread position:
               203-445
               

               Cow position:
               chr9:25921709-25921952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               170, 24
               

               Conread position:
               204-375
               

               Cow position:
               chr9:38846447-38846281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               205-346
               

               Cow position:
               chr9:32812066-32812204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 107
               

               Conread position:
               205-371
               

               Cow position:
               chr9:28295178-28295342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 38
               

               Conread position:
               205-377
               

               Cow position:
               chr9:37069672-37069499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               205-380
               

               Cow position:
               chr9:39315739-39315910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               168, 70
               

               Conread position:
               205-404
               

               Cow position:
               chr9:9686526-9686329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               171, 127
               

               Conread position:
               206-343
               

               Cow position:
               chr9:1878808-1878947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               206-367
               

               Cow position:
               chr9:27345693-27345536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               206-407
               

               Cow position:
               chr9:7409647-7409865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               207-407
               

               Cow position:
               chr9:5433521-5433725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               167, 21
               

               Conread position:
               207-407
               

               Cow position:
               chr9:55889703-55889898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               208-370
               

               Cow position:
               chr9:7859742-7859586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               208-378
               

               Cow position:
               chr9:54677153-54677316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               208-390
               

               Cow position:
               chr9:54664744-54664923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               173, 76
               

               Conread position:
               208-407
               

               Cow position:
               chr9:42446093-42445892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               165, 32
               

               Conread position:
               210-362
               

               Cow position:
               chr9:32089279-32089432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               210-391
               

               Cow position:
               chr9:52258170-52257994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               164, 14
               

               Conread position:
               213-404
               

               Cow position:
               chr9:5077812-5077626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               214-389
               

               Cow position:
               chr9:623250-623424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               158, 97
               

               Conread position:
               214-406
               

               Cow position:
               chr9:64559988-64559798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               9, 134
               

               Conread position:
               214-407
               

               Cow position:
               chr9:28726836-28726633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               214-407
               

               Cow position:
               chr9:39011577-39011382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               9, 179
               

               Conread position:
               214-422
               

               Cow position:
               chr9:50382426-50382222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               160, 9
               

               Conread position:
               215-407
               

               Cow position:
               chr9:34902204-34902021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               216-352
               

               Cow position:
               chr9:35793575-35793710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               216-369
               

               Cow position:
               chr9:21292512-21292357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-405
               

               Cow position:
               chr9:41781552-41781740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               216-406
               

               Cow position:
               chr9:31359500-31359687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               7, 131
               

               Conread position:
               216-407
               

               Cow position:
               chr9:1878104-1877920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               216-407
               

               Cow position:
               chr9:40215142-40215329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 97
               

               Conread position:
               218-391
               

               Cow position:
               chr9:13670531-13670705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               5, 162
               

               Conread position:
               219-370
               

               Cow position:
               chr9:34484494-34484646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               219-400
               

               Cow position:
               chr9:23797137-23797319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               154, 15
               

               Conread position:
               219-407
               

               Cow position:
               chr9:5836047-5836242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               219-407
               

               Cow position:
               chr9:52598821-52598636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               221-333
               

               Cow position:
               chr9:35932912-35932800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               103, 90
               

               Conread position:
               221-344
               

               Cow position:
               chr9:34917282-34917162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               221-380
               

               Cow position:
               chr9:42586653-42586495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               156, 14
               

               Conread position:
               221-406
               

               Cow position:
               chr9:1867356-1867536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               221-407
               

               Cow position:
               chr9:22318256-22318438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               102, 10
               

               Conread position:
               221-407
               

               Cow position:
               chr9:63745717-63745898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 37
               

               Conread position:
               221-420
               

               Cow position:
               chr9:29819621-29819816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               221-422
               

               Cow position:
               chr9:7806059-7805857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 150
               

               Conread position:
               222-338
               

               Cow position:
               chr9:8645169-8645286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               222-345
               

               Cow position:
               chr9:2951605-2951479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               222-345
               

               Cow position:
               chr9:40603571-40603694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-349
               

               Cow position:
               chr9:34707408-34707282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               222-353
               

               Cow position:
               chr9:52807502-52807371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 118
               

               Conread position:
               222-371
               

               Cow position:
               chr9:10877985-10877842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               147, 49
               

               Conread position:
               222-373
               

               Cow position:
               chr9:3353265-3353409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               222-375
               

               Cow position:
               chr9:34375021-34374869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               222-396
               

               Cow position:
               chr9:32955781-32955608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               159, 31
               

               Conread position:
               222-402
               

               Cow position:
               chr9:8901323-8901141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               151, 35
               

               Conread position:
               222-406
               

               Cow position:
               chr9:35832715-35832529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               147, 34
               

               Conread position:
               222-406
               

               Cow position:
               chr9:50139188-50139373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               115, 155
               

               Conread position:
               222-407
               

               Cow position:
               chr9:5342344-5342164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr9:9311761-9311948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               222-407
               

               Cow position:
               chr9:15806020-15805833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               222-407
               

               Cow position:
               chr9:29339411-29339235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 89
               

               Conread position:
               222-407
               

               Cow position:
               chr9:30402523-30402333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr9:32307328-32307149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr9:38645441-38645255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               151, 72
               

               Conread position:
               222-407
               

               Cow position:
               chr9:41513535-41513711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               222-407
               

               Cow position:
               chr9:43342234-43342417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               153
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               150, 128
               

               Conread position:
               222-408
               

               Cow position:
               chr9:34286702-34286891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               148, 174
               

               Conread position:
               223-346
               

               Cow position:
               chr9:35295594-35295717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-361
               

               Cow position:
               chr9:20637276-20637415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               223-366
               

               Cow position:
               chr9:39148983-39149126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-370
               

               Cow position:
               chr9:23970993-23970845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               223-372
               

               Cow position:
               chr9:25375830-25375683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               223-379
               

               Cow position:
               chr9:4341255-4341100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               223-381
               

               Cow position:
               chr9:55495082-55494924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-382
               

               Cow position:
               chr9:33597890-33598050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-386
               

               Cow position:
               chr9:18216005-18215844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               20, 34
               

               Conread position:
               223-386
               

               Cow position:
               chr9:47214640-47214480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               223-404
               

               Cow position:
               chr9:21460247-21460066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               165, 89
               

               Conread position:
               223-406
               

               Cow position:
               chr9:9199875-9199694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               108, 56
               

               Conread position:
               223-406
               

               Cow position:
               chr9:44396566-44396745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr9:1751241-1751425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 163
               

               Conread position:
               223-407
               

               Cow position:
               chr9:5327162-5327343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               223-407
               

               Cow position:
               chr9:5594406-5594589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               20, 149
               

               Conread position:
               223-407
               

               Cow position:
               chr9:5650068-5649885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               146, 84
               

               Conread position:
               223-407
               

               Cow position:
               chr9:8998253-8998444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-407
               

               Cow position:
               chr9:15215783-15215598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               223-407
               

               Cow position:
               chr9:20322190-20322017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 89
               

               Conread position:
               223-407
               

               Cow position:
               chr9:20755852-20755668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-407
               

               Cow position:
               chr9:22443722-22443540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               151, 17
               

               Conread position:
               223-407
               

               Cow position:
               chr9:27279213-27279396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               159, 149
               

               Conread position:
               223-407
               

               Cow position:
               chr9:32670043-32669860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               162, 152
               

               Conread position:
               223-411
               

               Cow position:
               chr9:63169876-63170061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 34
               

               Conread position:
               223-415
               

               Cow position:
               chr9:37138944-37139139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-426
               

               Cow position:
               chr9:1729770-1729564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               147, 197
               

               Conread position:
               223-434
               

               Cow position:
               chr9:9815317-9815530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               223-441
               

               Cow position:
               chr9:34410492-34410275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-452
               

               Cow position:
               chr9:42062002-42062236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               15, 184
               

               Conread position:
               224-371
               

               Cow position:
               chr9:12786568-12786421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-376
               

               Cow position:
               chr9:6839899-6840050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               224-378
               

               Cow position:
               chr9:56827381-56827539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               104, 152
               

               Conread position:
               224-400
               

               Cow position:
               chr9:61997698-61997516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               88, 58
               

               Conread position:
               224-406
               

               Cow position:
               chr9:18425817-18426004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               224-411
               

               Cow position:
               chr9:5110764-5110951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               150, 11
               

               Conread position:
               226-338
               

               Cow position:
               chr9:9088514-9088621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               226-404
               

               Cow position:
               chr9:54615393-54615216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               144, 86
               

               Conread position:
               226-406
               

               Cow position:
               chr9:34283861-34284038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               153
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               138, 27
               

               Conread position:
               226-407
               

               Cow position:
               chr9:45756271-45756454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               226-445
               

               Cow position:
               chr9:24652311-24652536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               146, 194
               

               Conread position:
               228-331
               

               Cow position:
               chr9:34811385-34811488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               228-407
               

               Cow position:
               chr9:62656713-62656889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               228-451
               

               Cow position:
               chr9:25583739-25583961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               142, 105
               

               Conread position:
               230-372
               

               Cow position:
               chr9:13846216-13846074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               230-407
               

               Cow position:
               chr9:43870886-43871066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               231-329
               

               Cow position:
               chr9:9091193-9091095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-343
               

               Cow position:
               chr9:36401753-36401641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-350
               

               Cow position:
               chr9:11427571-11427694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               231-353
               

               Cow position:
               chr9:35306434-35306312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-369
               

               Cow position:
               chr9:13742435-13742573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-372
               

               Cow position:
               chr9:55529712-55529848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               231-376
               

               Cow position:
               chr9:64155939-64155794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-379
               

               Cow position:
               chr9:50310847-50310707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               231-380
               

               Cow position:
               chr9:41964822-41964675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               231-383
               

               Cow position:
               chr9:10010727-10010872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr9:40542048-40542191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               231-383
               

               Cow position:
               chr9:64629450-64629302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               231-384
               

               Cow position:
               chr9:8992268-8992114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               231-388
               

               Cow position:
               chr9:44822412-44822255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               231-389
               

               Cow position:
               chr9:41394735-41394577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-391
               

               Cow position:
               chr9:26085970-26086129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 83
               

               Conread position:
               231-393
               

               Cow position:
               chr9:19713992-19714155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               231-396
               

               Cow position:
               chr9:50977341-50977165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               231-398
               

               Cow position:
               chr9:34279144-34278976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               231-399
               

               Cow position:
               chr9:22152173-22152003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               139, 103
               

               Conread position:
               231-400
               

               Cow position:
               chr9:26477127-26477296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               22, 141
               

               Conread position:
               231-400
               

               Cow position:
               chr9:51566583-51566412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               231-400
               

               Cow position:
               chr9:60110162-60110332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               143, 97
               

               Conread position:
               231-402
               

               Cow position:
               chr9:5164073-5163901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               143, 78
               

               Conread position:
               231-402
               

               Cow position:
               chr9:52267843-52267674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               149, 81
               

               Conread position:
               231-404
               

               Cow position:
               chr9:28754731-28754904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               157, 11
               

               Conread position:
               231-404
               

               Cow position:
               chr9:54493047-54493223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               142, 165
               

               Conread position:
               231-405
               

               Cow position:
               chr9:33541967-33542142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-405
               

               Cow position:
               chr9:54716690-54716521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               117, 78
               

               Conread position:
               231-406
               

               Cow position:
               chr9:3343661-3343835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr9:4861296-4861474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               137, 151
               

               Conread position:
               231-406
               

               Cow position:
               chr9:33114258-33114433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               142, 91
               

               Conread position:
               231-406
               

               Cow position:
               chr9:35167088-35167262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               231-406
               

               Cow position:
               chr9:42478570-42478395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               139, 155
               

               Conread position:
               231-407
               

               Cow position:
               chr9:3186038-3186215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               122, 163
               

               Conread position:
               231-407
               

               Cow position:
               chr9:5245765-5245949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               106, 101
               

               Conread position:
               231-407
               

               Cow position:
               chr9:6852155-6851981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               143, 81
               

               Conread position:
               231-407
               

               Cow position:
               chr9:8834215-8834042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               139, 100
               

               Conread position:
               231-407
               

               Cow position:
               chr9:9552003-9552180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               143, 22
               

               Conread position:
               231-407
               

               Cow position:
               chr9:11123571-11123395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               143, 69
               

               Conread position:
               231-407
               

               Cow position:
               chr9:12910491-12910314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 146
               

               Conread position:
               231-407
               

               Cow position:
               chr9:17799544-17799717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               231-407
               

               Cow position:
               chr9:17872198-17872019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               142, 165
               

               Conread position:
               231-407
               

               Cow position:
               chr9:23788351-23788525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               231-407
               

               Cow position:
               chr9:26057518-26057354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr9:26102647-26102811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr9:26435145-26434969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               231-407
               

               Cow position:
               chr9:28354429-28354608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               150
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr9:29185225-29185045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr9:38624712-38624537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               231-407
               

               Cow position:
               chr9:49764560-49764744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 154
               

               Conread position:
               231-407
               

               Cow position:
               chr9:51720985-51720815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr9:52839967-52839799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr9:55287977-55287804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               231-407
               

               Cow position:
               chr9:56032404-56032231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               9, 141
               

               Conread position:
               232-376
               

               Cow position:
               chr9:22434015-22433872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               232-381
               

               Cow position:
               chr9:44584507-44584654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               232-382
               

               Cow position:
               chr9:31346863-31347012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               232-386
               

               Cow position:
               chr9:12337815-12337970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               232-399
               

               Cow position:
               chr9:5219259-5219089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               94, 164
               

               Conread position:
               232-405
               

               Cow position:
               chr9:63153901-63153732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 26
               

               Conread position:
               232-407
               

               Cow position:
               chr9:4630017-4630192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               138, 82
               

               Conread position:
               232-407
               

               Cow position:
               chr9:6934160-6933986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               85, 73
               

               Conread position:
               232-407
               

               Cow position:
               chr9:9753478-9753306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               232-407
               

               Cow position:
               chr9:12226064-12225890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               142, 39
               

               Conread position:
               232-407
               

               Cow position:
               chr9:19902995-19903168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               232-407
               

               Cow position:
               chr9:21888083-21888254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               150
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               154, 100
               

               Conread position:
               232-407
               

               Cow position:
               chr9:29684058-29684235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               130, 22
               

               Conread position:
               232-407
               

               Cow position:
               chr9:33696949-33697117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               148, 35
               

               Conread position:
               232-407
               

               Cow position:
               chr9:55075215-55075046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               233-390
               

               Cow position:
               chr9:31772164-31772008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               233-398
               

               Cow position:
               chr9:64637465-64637625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 80
               

               Conread position:
               233-407
               

               Cow position:
               chr9:5469784-5469950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 20
               

               Conread position:
               234-379
               

               Cow position:
               chr9:33347575-33347431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr9:26403700-26403872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               234-407
               

               Cow position:
               chr9:41282930-41283101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               143
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               235-364
               

               Cow position:
               chr9:60355298-60355167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               235-378
               

               Cow position:
               chr9:35049396-35049532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               235-379
               

               Cow position:
               chr9:34973796-34973651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               98, 103
               

               Conread position:
               235-383
               

               Cow position:
               chr9:4580488-4580339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               235-404
               

               Cow position:
               chr9:31557811-31557642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               139, 35
               

               Conread position:
               235-405
               

               Cow position:
               chr9:3573383-3573554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               126, 54
               

               Conread position:
               235-406
               

               Cow position:
               chr9:34468663-34468494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               28, 142
               

               Conread position:
               235-407
               

               Cow position:
               chr9:25400283-25400109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               8, 70
               

               Conread position:
               235-407
               

               Cow position:
               chr9:50075980-50076145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               235-407
               

               Cow position:
               chr9:55321553-55321729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               235-420
               

               Cow position:
               chr9:21384038-21383853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 91
               

               Conread position:
               236-404
               

               Cow position:
               chr9:11168647-11168814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               236-405
               

               Cow position:
               chr9:56065481-56065641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr9:8723711-8723884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               137, 87
               

               Conread position:
               236-407
               

               Cow position:
               chr9:54681427-54681594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               236-407
               

               Cow position:
               chr9:56011416-56011586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               236-447
               

               Cow position:
               chr9:52754933-52754726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               173, 76
               

               Conread position:
               237-365
               

               Cow position:
               chr9:5757071-5756942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 126
               

               Conread position:
               237-390
               

               Cow position:
               chr9:20416588-20416437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               137, 74
               

               Conread position:
               237-390
               

               Cow position:
               chr9:32371833-32371686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               137, 57
               

               Conread position:
               239-407
               

               Cow position:
               chr9:15225376-15225211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               242-407
               

               Cow position:
               chr9:5900038-5899874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               85, 29
               

               Conread position:
               243-388
               

               Cow position:
               chr9:5319546-5319691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               129, 56
               

               Conread position:
               243-391
               

               Cow position:
               chr9:45285611-45285461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               243-400
               

               Cow position:
               chr9:3220060-3220217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-407
               

               Cow position:
               chr9:23956056-23955896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               243-430
               

               Cow position:
               chr9:39135707-39135515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               243-447
               

               Cow position:
               chr9:6879703-6879900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               130, 69
               

               Conread position:
               244-395
               

               Cow position:
               chr9:56204735-56204884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               132, 67
               

               Conread position:
               244-398
               

               Cow position:
               chr9:42298117-42298264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr9:19493541-19493376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               244-407
               

               Cow position:
               chr9:24872761-24872923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               129, 67
               

               Conread position:
               244-407
               

               Cow position:
               chr9:38289396-38289237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               130, 12
               

               Conread position:
               244-407
               

               Cow position:
               chr9:40005399-40005563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               245-407
               

               Cow position:
               chr9:41679673-41679833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               246-407
               

               Cow position:
               chr9:49416914-49417074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               247-383
               

               Cow position:
               chr9:48016909-48017046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               69, 9
               

               Conread position:
               247-407
               

               Cow position:
               chr9:25556900-25557063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               251-407
               

               Cow position:
               chr9:40776730-40776885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               252-383
               

               Cow position:
               chr9:32115666-32115536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               122, 42
               

               Conread position:
               252-407
               

               Cow position:
               chr9:13761032-13761190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               254-406
               

               Cow position:
               chr9:1949852-1950006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 121
               

               Conread position:
               254-407
               

               Cow position:
               chr9:49709782-49709931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               254-420
               

               Cow position:
               chr9:32991210-32991369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               143, 44
               

               Conread position:
               256-405
               

               Cow position:
               chr9:4646388-4646243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               256-406
               

               Cow position:
               chr9:5209517-5209667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               120, 137
               

               Conread position:
               261-383
               

               Cow position:
               chr9:43936887-43937010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr9:17928699-17928847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               261-407
               

               Cow position:
               chr9:32676619-32676765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               263-368
               

               Cow position:
               chr9:41662504-41662609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               268-407
               

               Cow position:
               chr9:48100744-48100885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               271-407
               

               Cow position:
               chr9:35375378-35375515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               103, 30
               

               Conread position:
               277-396
               

               Cow position:
               chr9:1370886-1371005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               102, 94
               

               Conread position:
               279-407
               

               Cow position:
               chr9:41789244-41789372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               75, 85
               

               Conread position:
               282-407
               

               Cow position:
               chr9:35849867-35849991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               291-405
               

               Cow position:
               chr9:9416423-9416311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               79-224
               

               Cow position:
               chrX:11501149-11501001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               80-169
               

               Cow position:
               chrX:11633933-11633843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               79
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               81-407
               

               Cow position:
               chrX:43729923-43730254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 52
               

               Conread position:
               85-334
               

               Cow position:
               chrX:36796627-36796362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               83, 223
               

               Conread position:
               86-183
               

               Cow position:
               chrX:8759868-8759769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               86-206
               

               Cow position:
               chrX:11195028-11194904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 95
               

               Conread position:
               86-226
               

               Cow position:
               chrX:15545407-15545548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               100, 92
               

               Conread position:
               86-400
               

               Cow position:
               chrX:27771690-27771988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               87-329
               

               Cow position:
               chrX:23187305-23187547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               87-339
               

               Cow position:
               chrX:33151684-33151947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               88-211
               

               Cow position:
               chrX:27689353-27689232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               98, 90
               

               Conread position:
               88-211
               

               Cow position:
               chrX:35848991-35848863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               88-292
               

               Cow position:
               chrX:42482547-42482752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               166
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               10, 19
               

               Conread position:
               88-326
               

               Cow position:
               chrX:25282771-25282989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               20, 82
               

               Conread position:
               88-407
               

               Cow position:
               chrX:878108-878415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               278, 90
               

               Conread position:
               89-210
               

               Cow position:
               chrX:33740701-33740580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               8, 91
               

               Conread position:
               89-229
               

               Cow position:
               chrX:38226524-38226668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               89-308
               

               Cow position:
               chrX:39938297-39938510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               183, 82
               

               Conread position:
               92-407
               

               Cow position:
               chrX:29121331-29121014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               131, 29
               

               Conread position:
               93-192
               

               Cow position:
               chrX:24546988-24547085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               94-184
               

               Cow position:
               chrX:40108108-40108197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               79
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               94-346
               

               Cow position:
               chrX:11180918-11181167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 131
               

               Conread position:
               94-407
               

               Cow position:
               chrX:11717488-11717820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               94-407
               

               Cow position:
               chrX:19096958-19097254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               234, 68
               

               Conread position:
               95-183
               

               Cow position:
               chrX:17524149-17524237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 10
               

               Conread position:
               95-195
               

               Cow position:
               chrX:30672150-30672248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               95-298
               

               Cow position:
               chrX:10078892-10079099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               111, 90
               

               Conread position:
               95-386
               

               Cow position:
               chrX:18046671-18046391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               95-411
               

               Cow position:
               chrX:37129532-37129231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 10
               

               Conread position:
               96-222
               

               Cow position:
               chrX:23182733-23182856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               96-226
               

               Cow position:
               chrX:11582535-11582395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               96-327
               

               Cow position:
               chrX:2742070-2742293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 9
               

               Conread position:
               96-369
               

               Cow position:
               chrX:21443464-21443720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               151, 66
               

               Conread position:
               96-404
               

               Cow position:
               chrX:23562900-23562604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               96-407
               

               Cow position:
               chrX:29194510-29194201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 111
               

               Conread position:
               96-407
               

               Cow position:
               chrX:40480614-40480900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               97-303
               

               Cow position:
               chrX:44569659-44569443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 162
               

               Conread position:
               98-203
               

               Cow position:
               chrX:12250047-12249946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               98-404
               

               Cow position:
               chrX:37232674-37232384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               64, 74
               

               Conread position:
               98-406
               

               Cow position:
               chrX:11454746-11455078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 7
               

               Conread position:
               99-184
               

               Cow position:
               chrX:4399349-4399263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               87
               

               Alignm identity:
               77
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               99-407
               

               Cow position:
               chrX:27516802-27516497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               78, 164
               

               Conread position:
               100-284
               

               Cow position:
               chrX:5803729-5803531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               79, 33
               

               Conread position:
               101-390
               

               Cow position:
               chrX:47123278-47122992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               144, 21
               

               Conread position:
               101-402
               

               Cow position:
               chrX:20743880-20743575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 32
               

               Conread position:
               102-386
               

               Cow position:
               chrX:11084811-11085072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               102-406
               

               Cow position:
               chrX:16348326-16348599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               270, 76
               

               Conread position:
               102-407
               

               Cow position:
               chrX:17726243-17725942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 76
               

               Conread position:
               105-407
               

               Cow position:
               chrX:31312281-31311995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               267, 72
               

               Conread position:
               105-407
               

               Cow position:
               chrX:41270742-41271029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               261, 60
               

               Conread position:
               106-191
               

               Cow position:
               chrX:33865073-33865160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               78
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               106-226
               

               Cow position:
               chrX:616015-616138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               80, 72
               

               Conread position:
               106-228
               

               Cow position:
               chrX:23575020-23574899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 73
               

               Conread position:
               106-273
               

               Cow position:
               chrX:27682921-27682766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               106-309
               

               Cow position:
               chrX:29328039-29327828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               106-347
               

               Cow position:
               chrX:23574912-23574683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               107-391
               

               Cow position:
               chrX:4036908-4037189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               108-354
               

               Cow position:
               chrX:27296275-27296507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               181, 62
               

               Conread position:
               113-362
               

               Cow position:
               chrX:35387660-35387911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               28, 107
               

               Conread position:
               118-406
               

               Cow position:
               chrX:5872572-5872288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               149-407
               

               Cow position:
               chrX:42235300-42235560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               156-345
               

               Cow position:
               chrX:23860772-23860964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               156-391
               

               Cow position:
               chrX:20801983-20801749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 24
               

               Conread position:
               161-407
               

               Cow position:
               chrX:14973533-14973772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               23, 75
               

               Conread position:
               167-405
               

               Cow position:
               chrX:917163-917395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               168-407
               

               Cow position:
               chrX:8797458-8797221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               168-407
               

               Cow position:
               chrX:22914840-22915069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               171-376
               

               Cow position:
               chrX:16575315-16575111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               80, 52
               

               Conread position:
               171-390
               

               Cow position:
               chrX:17966540-17966327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               171-400
               

               Cow position:
               chrX:161616-161386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               171-406
               

               Cow position:
               chrX:5679371-5679598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               45, 7
               

               Conread position:
               171-408
               

               Cow position:
               chrX:35413810-35413588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               173-407
               

               Cow position:
               chrX:32977886-32978109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               175-356
               

               Cow position:
               chrX:10076174-10075992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 165
               

               Conread position:
               181-367
               

               Cow position:
               chrX:25459532-25459726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               185-406
               

               Cow position:
               chrX:37910634-37910411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               185, 62
               

               Conread position:
               187-347
               

               Cow position:
               chrX:25424118-25423960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               47, 9
               

               Conread position:
               187-361
               

               Cow position:
               chrX:38226921-38227093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 82
               

               Conread position:
               188-407
               

               Cow position:
               chrX:9365487-9365707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               8, 185
               

               Conread position:
               191-407
               

               Cow position:
               chrX:27393841-27394054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 181
               

               Conread position:
               192-375
               

               Cow position:
               chrX:15147011-15147193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               192-407
               

               Cow position:
               chrX:15006967-15007181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               192-441
               

               Cow position:
               chrX:3130757-3130510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               193-386
               

               Cow position:
               chrX:23785827-23785636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               194-343
               

               Cow position:
               chrX:27667608-27667457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-345
               

               Cow position:
               chrX:4612708-4612852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-361
               

               Cow position:
               chrX:23266598-23266429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-380
               

               Cow position:
               chrX:12191940-12191757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-389
               

               Cow position:
               chrX:31373718-31373527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               12, 65
               

               Conread position:
               194-396
               

               Cow position:
               chrX:25412085-25411886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               194-407
               

               Cow position:
               chrX:13382505-13382298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               75, 12
               

               Conread position:
               194-407
               

               Cow position:
               chrX:40531863-40532076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               195-318
               

               Cow position:
               chrX:16481389-16481514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               195-407
               

               Cow position:
               chrX:29680078-29680292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               25, 179
               

               Conread position:
               196-407
               

               Cow position:
               chrX:7695926-7695718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               184, 10
               

               Conread position:
               196-451
               

               Cow position:
               chrX:22628151-22628410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               176, 24
               

               Conread position:
               197-362
               

               Cow position:
               chrX:753333-753165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               198-334
               

               Cow position:
               chrX:43014497-43014632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               199-407
               

               Cow position:
               chrX:23513845-23514047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               203-330
               

               Cow position:
               chrX:28876683-28876555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               204-407
               

               Cow position:
               chrX:28134507-28134314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               204-407
               

               Cow position:
               chrX:42855627-42855421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               169, 27
               

               Conread position:
               205-407
               

               Cow position:
               chrX:4043697-4043892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               205-407
               

               Cow position:
               chrX:38964279-38964073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               205-407
               

               Cow position:
               chrX:46072646-46072852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               19, 192
               

               Conread position:
               205-407
               

               Cow position:
               chrX:46532329-46532533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               168, 15
               

               Conread position:
               206-407
               

               Cow position:
               chrX:7351466-7351269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               206-407
               

               Cow position:
               chrX:11082452-11082656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               206-407
               

               Cow position:
               chrX:21593454-21593256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 24
               

               Conread position:
               207-331
               

               Cow position:
               chrX:41990966-41991090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-407
               

               Cow position:
               chrX:38654273-38654464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               167, 89
               

               Conread position:
               208-375
               

               Cow position:
               chrX:42380948-42381114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               159, 12
               

               Conread position:
               208-407
               

               Cow position:
               chrX:169379-169577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               163, 115
               

               Conread position:
               210-407
               

               Cow position:
               chrX:27119859-27119666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 50
               

               Conread position:
               210-407
               

               Cow position:
               chrX:30543121-30543320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               162, 14
               

               Conread position:
               210-407
               

               Cow position:
               chrX:41027322-41027124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               163, 21
               

               Conread position:
               211-407
               

               Cow position:
               chrX:27413675-27413478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               160, 142
               

               Conread position:
               214-352
               

               Cow position:
               chrX:18637654-18637512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               214-356
               

               Cow position:
               chrX:20583828-20583684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               214-407
               

               Cow position:
               chrX:41068885-41068689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               168, 10
               

               Conread position:
               215-405
               

               Cow position:
               chrX:33001067-33000873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               16, 182
               

               Conread position:
               215-407
               

               Cow position:
               chrX:43527669-43527478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               12, 152
               

               Conread position:
               216-404
               

               Cow position:
               chrX:34412008-34411813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               7, 184
               

               Conread position:
               216-407
               

               Cow position:
               chrX:38094361-38094553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               7, 25
               

               Conread position:
               217-351
               

               Cow position:
               chrX:32867033-32866899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               217-407
               

               Cow position:
               chrX:20697449-20697639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               19, 163
               

               Conread position:
               217-407
               

               Cow position:
               chrX:41238199-41238385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               219-402
               

               Cow position:
               chrX:27511584-27511402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               155, 160
               

               Conread position:
               221-368
               

               Cow position:
               chrX:3860484-3860621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               132, 18
               

               Conread position:
               221-379
               

               Cow position:
               chrX:42331437-42331275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               116, 19
               

               Conread position:
               222-346
               

               Cow position:
               chrX:2314466-2314590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               222-346
               

               Cow position:
               chrX:29562933-29563053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               222-358
               

               Cow position:
               chrX:20345603-20345470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               222-369
               

               Cow position:
               chrX:38301962-38301815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-369
               

               Cow position:
               chrX:41810015-41810161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               222-370
               

               Cow position:
               chrX:1122394-1122538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-370
               

               Cow position:
               chrX:24170577-24170724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               222-371
               

               Cow position:
               chrX:4559886-4559743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               222-373
               

               Cow position:
               chrX:35658949-35658802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               222-376
               

               Cow position:
               chrX:21665087-21665243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               222-380
               

               Cow position:
               chrX:11653923-11653760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               105, 159
               

               Conread position:
               222-380
               

               Cow position:
               chrX:38587690-38587847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               222-380
               

               Cow position:
               chrX:42506080-42506231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               222-383
               

               Cow position:
               chrX:28878021-28878183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               222-383
               

               Cow position:
               chrX:35382884-35383040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               222-387
               

               Cow position:
               chrX:26843116-26843281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               222-389
               

               Cow position:
               chrX:31626824-31626985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 88
               

               Conread position:
               222-393
               

               Cow position:
               chrX:45099281-45099107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               222-399
               

               Cow position:
               chrX:1087990-1088167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               151, 90
               

               Conread position:
               222-402
               

               Cow position:
               chrX:6599629-6599811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               160, 173
               

               Conread position:
               222-404
               

               Cow position:
               chrX:22115165-22115345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               158, 18
               

               Conread position:
               222-406
               

               Cow position:
               chrX:23498527-23498709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               151
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               158, 90
               

               Conread position:
               222-406
               

               Cow position:
               chrX:29601675-29601861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               222-406
               

               Cow position:
               chrX:42873538-42873359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               57, 93
               

               Conread position:
               222-407
               

               Cow position:
               chrX:4515844-4515652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               222-407
               

               Cow position:
               chrX:12979681-12979869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               157, 174
               

               Conread position:
               222-407
               

               Cow position:
               chrX:17888270-17888451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               222-407
               

               Cow position:
               chrX:18964675-18964857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               222-407
               

               Cow position:
               chrX:23092026-23091835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               24, 185
               

               Conread position:
               222-407
               

               Cow position:
               chrX:28865852-28866037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 91
               

               Conread position:
               222-407
               

               Cow position:
               chrX:34441301-34441483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               222-407
               

               Cow position:
               chrX:34503075-34502890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               14, 155
               

               Conread position:
               222-407
               

               Cow position:
               chrX:38549600-38549415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               152
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               111, 150
               

               Conread position:
               222-407
               

               Cow position:
               chrX:40685175-40685363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               145, 166
               

               Conread position:
               222-426
               

               Cow position:
               chrX:12309233-12309437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               162, 149
               

               Conread position:
               223-342
               

               Cow position:
               chrX:17498474-17498355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-361
               

               Cow position:
               chrX:36313854-36313992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               223-367
               

               Cow position:
               chrX:35285325-35285181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-370
               

               Cow position:
               chrX:19761906-19761759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               223-372
               

               Cow position:
               chrX:4328032-4328180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               223-372
               

               Cow position:
               chrX:17524232-17524381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               49, 42
               

               Conread position:
               223-372
               

               Cow position:
               chrX:36283491-36283341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               223-373
               

               Cow position:
               chrX:18204311-18204465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               223-375
               

               Cow position:
               chrX:39180082-39180233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               223-376
               

               Cow position:
               chrX:31829309-31829461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               223-377
               

               Cow position:
               chrX:11656233-11656078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               223-377
               

               Cow position:
               chrX:25788753-25788906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               223-377
               

               Cow position:
               chrX:34420886-34420732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-378
               

               Cow position:
               chrX:27668806-27668960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               223-387
               

               Cow position:
               chrX:27145756-27145593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               223-388
               

               Cow position:
               chrX:16984792-16984632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               223-388
               

               Cow position:
               chrX:40337062-40336900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               223-400
               

               Cow position:
               chrX:20339742-20339916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               158, 58
               

               Conread position:
               223-400
               

               Cow position:
               chrX:31489672-31489493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               223-402
               

               Cow position:
               chrX:32318458-32318276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               223-404
               

               Cow position:
               chrX:37780956-37781140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 173
               

               Conread position:
               223-405
               

               Cow position:
               chrX:31250540-31250357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               151, 171
               

               Conread position:
               223-406
               

               Cow position:
               chrX:22387098-22387273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               223-406
               

               Cow position:
               chrX:30840698-30840508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               223-406
               

               Cow position:
               chrX:35269013-35268834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               151, 89
               

               Conread position:
               223-407
               

               Cow position:
               chrX:1466315-1466129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 172
               

               Conread position:
               223-407
               

               Cow position:
               chrX:6259996-6260180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 110
               

               Conread position:
               223-407
               

               Cow position:
               chrX:21328065-21327874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               223-407
               

               Cow position:
               chrX:29115858-29115679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 90
               

               Conread position:
               223-407
               

               Cow position:
               chrX:31252559-31252386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               223-407
               

               Cow position:
               chrX:40035288-40035475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 110
               

               Conread position:
               223-407
               

               Cow position:
               chrX:42247030-42247218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               153
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               223-407
               

               Cow position:
               chrX:45113772-45113587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               57, 12
               

               Conread position:
               223-408
               

               Cow position:
               chrX:44702914-44703105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               77, 149
               

               Conread position:
               223-441
               

               Cow position:
               chrX:36866324-36866106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               164, 48
               

               Conread position:
               223-444
               

               Cow position:
               chrX:48558898-48558677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               186, 148
               

               Conread position:
               224-323
               

               Cow position:
               chrX:40543372-40543469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               224-343
               

               Cow position:
               chrX:48822192-48822310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               224-368
               

               Cow position:
               chrX:19717670-19717529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               224-378
               

               Cow position:
               chrX:27446837-27446683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               224-398
               

               Cow position:
               chrX:33855069-33855245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               127, 60
               

               Conread position:
               224-407
               

               Cow position:
               chrX:20168708-20168526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               224-407
               

               Cow position:
               chrX:40680765-40680579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               224-407
               

               Cow position:
               chrX:45977077-45976890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               141, 173
               

               Conread position:
               225-376
               

               Cow position:
               chrX:9416534-9416684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               225-396
               

               Cow position:
               chrX:40108368-40108539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               97, 147
               

               Conread position:
               226-348
               

               Cow position:
               chrX:1960276-1960398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               226-407
               

               Cow position:
               chrX:6278349-6278532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               227-389
               

               Cow position:
               chrX:46770815-46770977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               228-406
               

               Cow position:
               chrX:19943089-19943268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               146, 71
               

               Conread position:
               230-372
               

               Cow position:
               chrX:38722267-38722124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               230-390
               

               Cow position:
               chrX:42282721-42282561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               104, 55
               

               Conread position:
               230-407
               

               Cow position:
               chrX:32431768-32431589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               141, 10
               

               Conread position:
               230-407
               

               Cow position:
               chrX:46429674-46429854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               143, 166
               

               Conread position:
               231-345
               

               Cow position:
               chrX:2551236-2551121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               231-347
               

               Cow position:
               chrX:46909959-46909843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-353
               

               Cow position:
               chrX:28067994-28067872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-357
               

               Cow position:
               chrX:34508688-34508562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-362
               

               Cow position:
               chrX:47342259-47342129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               231-374
               

               Cow position:
               chrX:19018687-19018830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               231-381
               

               Cow position:
               chrX:30672246-30672401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               69, 146
               

               Conread position:
               231-386
               

               Cow position:
               chrX:29733449-29733603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               231-389
               

               Cow position:
               chrX:8731237-8731080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-389
               

               Cow position:
               chrX:32330314-32330155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-390
               

               Cow position:
               chrX:41192848-41192690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-390
               

               Cow position:
               chrX:42449870-42450031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               231-397
               

               Cow position:
               chrX:35885583-35885751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               231-404
               

               Cow position:
               chrX:8869257-8869433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               21, 165
               

               Conread position:
               231-405
               

               Cow position:
               chrX:27175142-27174967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               231-405
               

               Cow position:
               chrX:34543928-34543750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               231-405
               

               Cow position:
               chrX:36976095-36975920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               231-406
               

               Cow position:
               chrX:4399263-4399092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               100, 58
               

               Conread position:
               231-406
               

               Cow position:
               chrX:4768876-4768711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-406
               

               Cow position:
               chrX:5900606-5900438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               231-406
               

               Cow position:
               chrX:38218860-38218677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               231-406
               

               Cow position:
               chrX:46587966-46587789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               231-407
               

               Cow position:
               chrX:4152887-4153067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               140, 166
               

               Conread position:
               231-407
               

               Cow position:
               chrX:9201692-9201518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               160, 132
               

               Conread position:
               231-407
               

               Cow position:
               chrX:10516397-10516218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               231-407
               

               Cow position:
               chrX:11614837-11614668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               231-407
               

               Cow position:
               chrX:23088996-23088832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               231-407
               

               Cow position:
               chrX:25037131-25036955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               149, 140
               

               Conread position:
               231-407
               

               Cow position:
               chrX:25815758-25815940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               137, 27
               

               Conread position:
               231-407
               

               Cow position:
               chrX:27228271-27228096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               19, 144
               

               Conread position:
               231-407
               

               Cow position:
               chrX:30133177-30133352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               143, 11
               

               Conread position:
               231-407
               

               Cow position:
               chrX:32623714-32623535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               140, 22
               

               Conread position:
               231-407
               

               Cow position:
               chrX:36356249-36356081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               231-407
               

               Cow position:
               chrX:38208401-38208575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 27
               

               Conread position:
               231-407
               

               Cow position:
               chrX:41878790-41878964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               135, 80
               

               Conread position:
               231-407
               

               Cow position:
               chrX:42492380-42492549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               231-407
               

               Cow position:
               chrX:43779708-43779878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               231-407
               

               Cow position:
               chrX:44656813-44656993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               143, 122
               

               Conread position:
               231-407
               

               Cow position:
               chrX:44961895-44961717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               232-379
               

               Cow position:
               chrX:29478866-29478721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               232-381
               

               Cow position:
               chrX:11762859-11763006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               232-386
               

               Cow position:
               chrX:42432366-42432525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 67
               

               Conread position:
               232-403
               

               Cow position:
               chrX:33640118-33639945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               141, 125
               

               Conread position:
               232-407
               

               Cow position:
               chrX:6407686-6407512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               144, 68
               

               Conread position:
               232-407
               

               Cow position:
               chrX:7710396-7710570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               232-407
               

               Cow position:
               chrX:9252020-9252194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               232-407
               

               Cow position:
               chrX:27261335-27261156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               232-407
               

               Cow position:
               chrX:31442686-31442863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               232-407
               

               Cow position:
               chrX:32821171-32820998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               232-407
               

               Cow position:
               chrX:42894069-42893885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               232-407
               

               Cow position:
               chrX:44339182-44339356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               232-420
               

               Cow position:
               chrX:23188641-23188822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               233-329
               

               Cow position:
               chrX:30831191-30831287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-345
               

               Cow position:
               chrX:4092066-4091954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               233-383
               

               Cow position:
               chrX:23335834-23335979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 41
               

               Conread position:
               233-386
               

               Cow position:
               chrX:1175848-1175993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               147, 38
               

               Conread position:
               233-407
               

               Cow position:
               chrX:43150572-43150388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               233-407
               

               Cow position:
               chrX:45875533-45875361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               233-407
               

               Cow position:
               chrX:46433633-46433460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               233-441
               

               Cow position:
               chrX:6559315-6559510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               176, 46
               

               Conread position:
               233-457
               

               Cow position:
               chrX:29289720-29289498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               234-353
               

               Cow position:
               chrX:40355172-40355057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               234-373
               

               Cow position:
               chrX:31744863-31745003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               234-380
               

               Cow position:
               chrX:45968289-45968144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               234-406
               

               Cow position:
               chrX:4645772-4645943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               40, 34
               

               Conread position:
               234-407
               

               Cow position:
               chrX:23113426-23113244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               234-407
               

               Cow position:
               chrX:29553426-29553253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               137, 169
               

               Conread position:
               235-372
               

               Cow position:
               chrX:38725948-38725812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               235-375
               

               Cow position:
               chrX:32910239-32910105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               235-382
               

               Cow position:
               chrX:31294432-31294579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-387
               

               Cow position:
               chrX:5679791-5679932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               235-407
               

               Cow position:
               chrX:126907-126737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               148, 93
               

               Conread position:
               235-407
               

               Cow position:
               chrX:5919637-5919458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               235-407
               

               Cow position:
               chrX:10959255-10959429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               235-407
               

               Cow position:
               chrX:15820734-15820565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               235-407
               

               Cow position:
               chrX:34222854-34222682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               147, 47
               

               Conread position:
               235-407
               

               Cow position:
               chrX:34565423-34565249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               135, 18
               

               Conread position:
               235-407
               

               Cow position:
               chrX:39352925-39352748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               126, 69
               

               Conread position:
               235-407
               

               Cow position:
               chrX:39415230-39415400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               236-346
               

               Cow position:
               chrX:17908011-17908121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-387
               

               Cow position:
               chrX:20678003-20678152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               138, 94
               

               Conread position:
               236-390
               

               Cow position:
               chrX:27074912-27075064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               236-400
               

               Cow position:
               chrX:36514753-36514919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               236-405
               

               Cow position:
               chrX:39558210-39558380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               137, 53
               

               Conread position:
               236-407
               

               Cow position:
               chrX:11633821-11633648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               236-407
               

               Cow position:
               chrX:37119731-37119562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               138, 17
               

               Conread position:
               236-407
               

               Cow position:
               chrX:41123198-41123030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               143, 95
               

               Conread position:
               237-367
               

               Cow position:
               chrX:16323880-16324006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               237-382
               

               Cow position:
               chrX:24054816-24054666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               6, 140
               

               Conread position:
               237-400
               

               Cow position:
               chrX:6690122-6690283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               238-406
               

               Cow position:
               chrX:46793609-46793777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               238-407
               

               Cow position:
               chrX:10411847-10412018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               238-407
               

               Cow position:
               chrX:17956827-17956663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               238-407
               

               Cow position:
               chrX:39220216-39220047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               242-371
               

               Cow position:
               chrX:16830353-16830228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               242-388
               

               Cow position:
               chrX:20151989-20151846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               132, 70
               

               Conread position:
               242-404
               

               Cow position:
               chrX:7278044-7277884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               242-407
               

               Cow position:
               chrX:1499799-1499633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               242-407
               

               Cow position:
               chrX:31515307-31515136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               242-441
               

               Cow position:
               chrX:24287802-24287990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               243-405
               

               Cow position:
               chrX:47481928-47481772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               243-406
               

               Cow position:
               chrX:7162188-7162025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               131, 68
               

               Conread position:
               243-407
               

               Cow position:
               chrX:34315653-34315484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               244-407
               

               Cow position:
               chrX:1514288-1514442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               244-407
               

               Cow position:
               chrX:43568050-43567890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               247-400
               

               Cow position:
               chrX:13359301-13359446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               247-400
               

               Cow position:
               chrX:18694803-18694951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               247-407
               

               Cow position:
               chrX:19690342-19690186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               247-407
               

               Cow position:
               chrX:20881818-20881971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               248-405
               

               Cow position:
               chrX:4268938-4269091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               79, 8
               

               Conread position:
               249-405
               

               Cow position:
               chrX:19965271-19965432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               127, 9
               

               Conread position:
               251-369
               

               Cow position:
               chrX:37665815-37665697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               251-370
               

               Cow position:
               chrX:48683296-48683415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               251-410
               

               Cow position:
               chrX:35759812-35759974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               254-382
               

               Cow position:
               chrX:35278450-35278321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               255-356
               

               Cow position:
               chrX:25211048-25210948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               255-407
               

               Cow position:
               chrX:8925819-8925669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               255-407
               

               Cow position:
               chrX:11856550-11856396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               256-375
               

               Cow position:
               chrX:6213989-6213871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               256-407
               

               Cow position:
               chrX:21566526-21566372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               258-406
               

               Cow position:
               chrX:45403708-45403858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               125, 113
               

               Conread position:
               258-406
               

               Cow position:
               chrX:48111424-48111276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               123, 135
               

               Conread position:
               258-407
               

               Cow position:
               chrX:26625554-26625708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               260-406
               

               Cow position:
               chrX:38936815-38936666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               261-407
               

               Cow position:
               chrX:7722102-7721957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               112, 59
               

               Conread position:
               262-407
               

               Cow position:
               chrX:21004797-21004649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               264-407
               

               Cow position:
               chrX:41111827-41111689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               266-405
               

               Cow position:
               chrX:1397733-1397596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 92
               

               Conread position:
               270-407
               

               Cow position:
               chrX:27680503-27680363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               275-406
               

               Cow position:
               chrX:27685349-27685217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 120
               

               Conread position:
               286-407
               

               Cow position:
               chrX:1572050-1572169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               310-407
               

               Cow position:
               chrX:36961706-36961611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               69, 0