Cow genome map
| Conread name: | Pla1-C0000045_N06 |
| Conread position: | 54-391 |
| Cow position: | chr1:83593790-83594120 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 113, 40 |
| Conread position: | 56-294 |
| Cow position: | chr1:80422292-80422055 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 121, 27 |
| Conread position: | 56-384 |
| Cow position: | chr1:82880662-82880328 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 38 |
| Conread position: | 59-274 |
| Cow position: | chr1:52052704-52052932 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 67-293 |
| Cow position: | chr1:3607818-3607589 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 115, 100 |
| Conread position: | 54-391 |
| Cow position: | chr10:12919364-12919701 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 35, 55 |
| Conread position: | 30-391 |
| Cow position: | chr11:7460596-7460949 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 74 |
| Conread position: | 38-391 |
| Cow position: | chr11:80556233-80555892 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 249 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 54, 43 |
| Conread position: | 54-380 |
| Cow position: | chr11:21852307-21852642 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 57, 50 |
| Conread position: | 54-387 |
| Cow position: | chr11:11533933-11534263 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 84, 59 |
| Conread position: | 111-305 |
| Cow position: | chr11:72921735-72921925 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 182, 44 |
| Conread position: | 38-350 |
| Cow position: | chr12:24116373-24116684 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 54-212 |
| Cow position: | chr12:10942261-10942101 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 43, 38 |
| Conread position: | 54-390 |
| Cow position: | chr12:46714345-46714008 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 113, 38 |
| Conread position: | 54-391 |
| Cow position: | chr12:10491246-10490921 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 137, 92 |
| Conread position: | 54-391 |
| Cow position: | chr12:15122298-15121953 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 58-288 |
| Cow position: | chr12:22285152-22285385 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 111, 34 |
| Conread position: | 59-385 |
| Cow position: | chr12:7884712-7885035 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 69-349 |
| Cow position: | chr12:4341785-4342068 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 95, 23 |
| Conread position: | 54-307 |
| Cow position: | chr13:9107561-9107827 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 238 |
| Conread position: | 54-391 |
| Cow position: | chr13:4420315-4420646 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 129, 105 |
| Conread position: | 89-384 |
| Cow position: | chr13:33160991-33160687 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 10, 128 |
| Conread position: | 100-321 |
| Cow position: | chr13:4514477-4514698 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 89, 67 |
| Conread position: | 149-305 |
| Cow position: | chr13:20531042-20530895 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 160-378 |
| Cow position: | chr13:49283235-49283019 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 133, 54 |
| Conread position: | 54-391 |
| Cow position: | chr15:5727727-5728078 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 54-391 |
| Cow position: | chr15:23927397-23927050 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 85 |
| Conread position: | 55-297 |
| Cow position: | chr15:5717788-5718025 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 159, 95 |
| Conread position: | 60-357 |
| Cow position: | chr15:9648624-9648329 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 107, 32 |
| Conread position: | 107-391 |
| Cow position: | chr15:36643728-36643453 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 76, 56 |
| Conread position: | 40-288 |
| Cow position: | chr16:11940064-11939822 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 123, 33 |
| Conread position: | 54-328 |
| Cow position: | chr16:13578848-13579131 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 54-349 |
| Cow position: | chr16:42733998-42734301 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 125 |
| Conread position: | 54-384 |
| Cow position: | chr16:16280435-16280756 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 130, 38 |
| Conread position: | 56-307 |
| Cow position: | chr17:36275384-36275131 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 115, 25 |
| Conread position: | 38-384 |
| Cow position: | chr18:4535029-4535360 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 249 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 120, 45 |
| Conread position: | 50-391 |
| Cow position: | chr18:43950807-43950456 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 51-391 |
| Cow position: | chr18:52684619-52684955 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 32, 130 |
| Conread position: | 54-165 |
| Cow position: | chr18:18369380-18369492 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 60-257 |
| Cow position: | chr18:24508263-24508455 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 101-275 |
| Cow position: | chr18:4489961-4490142 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 107-391 |
| Cow position: | chr18:21106266-21106535 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 124, 40 |
| Conread position: | 113-391 |
| Cow position: | chr18:19115552-19115839 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 33-326 |
| Cow position: | chr19:33858751-33858457 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 119, 67 |
| Conread position: | 54-351 |
| Cow position: | chr19:47859314-47859615 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 123, 53 |
| Conread position: | 78-308 |
| Cow position: | chr19:47558322-47558083 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 86-386 |
| Cow position: | chr19:44143960-44144262 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 46, 96 |
| Conread position: | 95-391 |
| Cow position: | chr19:9583258-9582944 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 186 |
| Conread position: | 101-391 |
| Cow position: | chr19:30551984-30551684 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 192, 60 |
| Conread position: | 104-391 |
| Cow position: | chr19:39622849-39623144 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 52, 180 |
| Conread position: | 44-391 |
| Cow position: | chr2:56771846-56771497 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 22 |
| Conread position: | 54-391 |
| Cow position: | chr2:24593887-24593542 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 55-391 |
| Cow position: | chr2:7966112-7965769 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 65 |
| Conread position: | 101-389 |
| Cow position: | chr2:34617904-34617615 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 86, 66 |
| Conread position: | 157-335 |
| Cow position: | chr2:15568304-15568479 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 136, 34 |
| Conread position: | 160-288 |
| Cow position: | chr2:62744131-62744253 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 38-391 |
| Cow position: | chr20:3502338-3501986 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 51 |
| Conread position: | 38-391 |
| Cow position: | chr20:5702795-5702440 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 66 |
| Conread position: | 54-189 |
| Cow position: | chr20:37272770-37272638 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 54-193 |
| Cow position: | chr20:37357663-37357527 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 57-387 |
| Cow position: | chr20:5644843-5644526 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 104 |
| Conread position: | 89-341 |
| Cow position: | chr20:6045411-6045656 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 111, 15 |
| Conread position: | 101-384 |
| Cow position: | chr21:8420654-8420385 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 106 |
| Conread position: | 54-376 |
| Cow position: | chr22:15915032-15915352 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 34 |
| Conread position: | 54-391 |
| Cow position: | chr22:12803376-12803705 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 38-391 |
| Cow position: | chr23:8698451-8698097 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 41-376 |
| Cow position: | chr23:36687816-36688156 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 54-353 |
| Cow position: | chr23:36172533-36172235 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 137, 38 |
| Conread position: | 104-369 |
| Cow position: | chr23:6223949-6223683 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 48, 87 |
| Conread position: | 60-284 |
| Cow position: | chr24:35467219-35467447 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 35, 41 |
| Conread position: | 38-180 |
| Cow position: | chr25:11436781-11436923 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 38-332 |
| Cow position: | chr25:14118121-14117815 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 54, 75 |
| Conread position: | 54-391 |
| Cow position: | chr25:4521827-4522170 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 38, 50 |
| Conread position: | 38-391 |
| Cow position: | chr26:12964649-12964985 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 168, 121 |
| Conread position: | 57-391 |
| Cow position: | chr26:35449089-35448750 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 35, 111 |
| Conread position: | 100-378 |
| Cow position: | chr26:2994705-2994991 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 69, 183 |
| Conread position: | 54-391 |
| Cow position: | chr27:17646224-17645891 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 61-391 |
| Cow position: | chr27:23502439-23502768 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 54-391 |
| Cow position: | chr28:32174644-32174310 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 101-298 |
| Cow position: | chr28:13936368-13936164 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 178 |
| Conread position: | 37-277 |
| Cow position: | chr29:24578890-24578637 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 39-307 |
| Cow position: | chr29:13028469-13028189 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 245 |
| Conread position: | 94-371 |
| Cow position: | chr29:29121292-29121565 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 64, 179 |
| Conread position: | 30-384 |
| Cow position: | chr3:59621636-59621971 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 174, 62 |
| Conread position: | 35-268 |
| Cow position: | chr3:58765067-58765295 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 136 |
| Conread position: | 37-369 |
| Cow position: | chr3:59604851-59604519 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 52 |
| Conread position: | 38-391 |
| Cow position: | chr3:63177487-63177138 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 127 |
| Conread position: | 53-297 |
| Cow position: | chr3:30701299-30701042 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 39, 232 |
| Conread position: | 54-276 |
| Cow position: | chr3:22221316-22221092 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 113 |
| Conread position: | 54-279 |
| Cow position: | chr3:54739896-54740135 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 146 |
| Conread position: | 54-391 |
| Cow position: | chr3:19711350-19711689 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 26 |
| Conread position: | 55-391 |
| Cow position: | chr3:80468689-80469025 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 140, 37 |
| Conread position: | 57-326 |
| Cow position: | chr3:45897593-45897326 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 90 |
| Conread position: | 57-326 |
| Cow position: | chr3:45972463-45972730 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 90 |
| Conread position: | 69-245 |
| Cow position: | chr3:34861667-34861491 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 83-309 |
| Cow position: | chr3:70467865-70468095 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 107-391 |
| Cow position: | chr3:53091428-53091148 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 21-391 |
| Cow position: | chr4:25354563-25354196 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 15 |
| Conread position: | 54-271 |
| Cow position: | chr4:22546836-22547039 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 54-391 |
| Cow position: | chr4:36577626-36577952 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 131, 38 |
| Conread position: | 60-384 |
| Cow position: | chr4:1499183-1499496 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 174, 32 |
| Conread position: | 107-372 |
| Cow position: | chr4:63250999-63251263 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 186, 100 |
| Conread position: | 40-217 |
| Cow position: | chr5:20843345-20843528 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 54-391 |
| Cow position: | chr5:60448254-60447919 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 38 |
| Conread position: | 57-391 |
| Cow position: | chr5:41981407-41981076 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 97, 130 |
| Conread position: | 60-384 |
| Cow position: | chr5:67212393-67212063 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 221 |
| Conread position: | 67-391 |
| Cow position: | chr5:29844305-29843985 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 152, 17 |
| Conread position: | 108-376 |
| Cow position: | chr5:37757840-37758114 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 61, 104 |
| Conread position: | 54-317 |
| Cow position: | chr6:54600400-54600131 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 104, 157 |
| Conread position: | 54-353 |
| Cow position: | chr6:27239954-27240251 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 137, 40 |
| Conread position: | 54-372 |
| Cow position: | chr6:38234011-38233691 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 135, 43 |
| Conread position: | 78-349 |
| Cow position: | chr6:16352319-16352588 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 87, 14 |
| Conread position: | 108-391 |
| Cow position: | chr6:66431822-66431534 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 24-391 |
| Cow position: | chr7:11783344-11783727 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 91, 73 |
| Conread position: | 38-308 |
| Cow position: | chr7:53785910-53786184 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 94, 58 |
| Conread position: | 54-391 |
| Cow position: | chr7:7096007-7096354 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 32, 219 |
| Conread position: | 60-391 |
| Cow position: | chr7:53202760-53202427 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 61-391 |
| Cow position: | chr7:18964958-18964619 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 111, 22 |
| Conread position: | 67-391 |
| Cow position: | chr7:34004391-34004059 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 38-372 |
| Cow position: | chr8:16957661-16957330 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 13 |
| Conread position: | 39-391 |
| Cow position: | chr8:642538-642896 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 250 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 112, 27 |
| Conread position: | 54-274 |
| Cow position: | chr8:51480808-51481023 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 130, 38 |
| Conread position: | 54-356 |
| Cow position: | chr8:43227996-43227691 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 130, 43 |
| Conread position: | 54-388 |
| Cow position: | chr8:20657339-20657683 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 128, 38 |
| Conread position: | 54-391 |
| Cow position: | chr8:29026614-29026960 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 39 |
| Conread position: | 54-391 |
| Cow position: | chr8:29958429-29958089 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 223 |
| Conread position: | 70-387 |
| Cow position: | chr8:52229730-52230044 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 37-391 |
| Cow position: | chr9:58452078-58451727 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 54-391 |
| Cow position: | chr9:35592028-35592363 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 48 |
| Conread position: | 56-391 |
| Cow position: | chr9:48809551-48809895 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 108 |
| Conread position: | 160-391 |
| Cow position: | chr9:61739072-61739293 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 133, 52 |
| Conread position: | 38-288 |
| Cow position: | chrX:1466217-1465967 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 67, 54 |
| Conread position: | 54-292 |
| Cow position: | chrX:42499008-42499253 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 92, 152 |
| Conread position: | 54-378 |
| Cow position: | chrX:126811-126480 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 38 |
| Conread position: | 78-391 |
| Cow position: | chrX:30337929-30338243 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 6 |
| Conread position: | 91-292 |
| Cow position: | chrX:31745059-31745271 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 98-391 |
| Cow position: | chrX:34839805-34840091 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 149-391 |
| Cow position: | chrX:27459173-27458931 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 122 |