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Cow genome map

           
Conread name:
           
Pla1-C0000935_J05
        

               
Conread position:
               
151-338
               

               
Cow position:
               
chr10:25879172-25879360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
153-363
               

               
Cow position:
               
chr10:40347662-40347450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
111, 151
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr10:26539912-26539701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
110, 149
               

               
Conread position:
               
155-364
               

               
Cow position:
               
chr10:19514228-19514438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
202, 148
               

               
Conread position:
               
156-354
               

               
Cow position:
               
chr10:46171410-46171609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
8, 149
               

               
Conread position:
               
162-363
               

               
Cow position:
               
chr10:26923284-26923081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
109, 142
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr10:2117436-2117244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr10:52738863-52739055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr10:3495212-3495010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 124
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr10:14332835-14332633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr10:17959371-17959573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr10:21398215-21398013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr10:39441176-39441378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr10:48374439-48374237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr10:32703768-32703971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 141
               

               
Conread position:
               
165-362
               

               
Cow position:
               
chr10:35442968-35443161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
192, 79
               

               
Conread position:
               
166-319
               

               
Cow position:
               
chr10:10531704-10531548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
166-349
               

               
Cow position:
               
chr10:60739728-60739908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
134, 8
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr10:6002595-6002408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr10:17138037-17138224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr10:23848975-23849164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr10:25013911-25013725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr10:60704019-60703832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
113, 131
               

               
Conread position:
               
166-359
               

               
Cow position:
               
chr10:9155361-9155171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr10:31022046-31021847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
166-364
               

               
Cow position:
               
chr10:42213883-42214083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
167-363
               

               
Cow position:
               
chr10:9682158-9681960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
104, 137
               

               
Conread position:
               
167-363
               

               
Cow position:
               
chr10:32699675-32699872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
97, 110
               

               
Conread position:
               
168-354
               

               
Cow position:
               
chr10:38839397-38839585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
168-355
               

               
Cow position:
               
chr10:60155506-60155692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
110, 123
               

               
Conread position:
               
168-355
               

               
Cow position:
               
chr10:60191051-60191237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
110, 123
               

               
Conread position:
               
195-357
               

               
Cow position:
               
chr10:4702129-4701967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 110
               

               
Conread position:
               
148-363
               

               
Cow position:
               
chr11:2285339-2285559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 159
               

               
Conread position:
               
151-359
               

               
Cow position:
               
chr11:52936437-52936647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 144
               

               
Conread position:
               
154-355
               

               
Cow position:
               
chr11:10850755-10850957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr11:35738708-35738496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
162-349
               

               
Cow position:
               
chr11:29614035-29614222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 142
               

               
Conread position:
               
163-349
               

               
Cow position:
               
chr11:58820028-58820215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 131
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr11:44254718-44254910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr11:65281663-65281855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr11:3495687-3495889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr11:7121319-7121117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
101, 143
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr11:9707792-9707994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr11:10958475-10958676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 130
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr11:20731578-20731376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr11:28125159-28125361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr11:33601984-33601781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr11:44154434-44154232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr11:44515129-44514927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr11:44516525-44516323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr11:53429378-53429176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr11:63390835-63390633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr11:24494161-24493972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr11:39483929-39484118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 131
               

               
Conread position:
               
166-359
               

               
Cow position:
               
chr11:8819858-8820051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
166-359
               

               
Cow position:
               
chr11:35570563-35570371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
113, 76
               

               
Conread position:
               
166-362
               

               
Cow position:
               
chr11:81317641-81317444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
112, 44
               

               
Conread position:
               
166-364
               

               
Cow position:
               
chr11:56891571-56891372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 138
               

               
Conread position:
               
166-366
               

               
Cow position:
               
chr11:84214068-84213880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
166-368
               

               
Cow position:
               
chr11:66568699-66568897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
172-358
               

               
Cow position:
               
chr11:27889484-27889673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
181-355
               

               
Cow position:
               
chr11:22546432-22546610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr12:1006943-1007145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
95, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr12:1405378-1405578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr12:1491094-1491296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr12:10358623-10358825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr12:12755227-12755027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 134
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr12:17718228-17718430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr12:31027893-31027690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 124
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr12:34176292-34176494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr12:35548199-35547997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 143
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr12:42856603-42856402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
194, 140
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr12:536638-536449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
190-349
               

               
Cow position:
               
chr12:16438979-16439139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
214-355
               

               
Cow position:
               
chr12:7077523-7077381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
142-355
               

               
Cow position:
               
chr13:57431943-57431729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 150
               

               
Conread position:
               
146-363
               

               
Cow position:
               
chr13:3657649-3657429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 142
               

               
Conread position:
               
151-363
               

               
Cow position:
               
chr13:30305892-30306107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 154
               

               
Conread position:
               
162-349
               

               
Cow position:
               
chr13:5288674-5288860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
162-355
               

               
Cow position:
               
chr13:14400359-14400166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
109, 142
               

               
Conread position:
               
163-354
               

               
Cow position:
               
chr13:14411452-14411261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr13:3651724-3651532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr13:15921738-15921546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
108, 142
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr13:3556131-3556333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
101, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr13:4944109-4944311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr13:14303264-14303063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr13:16807316-16807518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr13:18330406-18330204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
74, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr13:21837578-21837376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr13:26204739-26204537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
110, 143
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr13:30242944-30243143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-368
               

               
Cow position:
               
chr13:47569811-47570012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
113, 78
               

               
Conread position:
               
166-373
               

               
Cow position:
               
chr13:48548874-48549077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
168-327
               

               
Cow position:
               
chr13:33929418-33929260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
110, 118
               

               
Conread position:
               
168-370
               

               
Cow position:
               
chr13:4934224-4934426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
162-355
               

               
Cow position:
               
chr14:29045085-29044892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 130
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr14:16997450-16997257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 142
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr14:43863509-43863317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr14:8998204-8998406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr14:9449940-9449742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
194, 104
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr14:11474701-11474499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr14:12740460-12740258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
109, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr14:13308321-13308523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr14:15337044-15336842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr14:23254749-23254547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr14:31882299-31882097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr14:34674690-34674892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr14:37226762-37226964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr14:38459563-38459362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 130
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr14:9811270-9811473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
166-364
               

               
Cow position:
               
chr14:25259583-25259781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
112, 25
               

               
Conread position:
               
152-361
               

               
Cow position:
               
chr15:41786129-41785916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 108
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr15:18265178-18264966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
10, 153
               

               
Conread position:
               
156-363
               

               
Cow position:
               
chr15:35643864-35643656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr15:25069901-25069709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr15:4641796-4641998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 96
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr15:7840927-7841129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr15:12858735-12858937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr15:21645510-21645308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr15:31585805-31585603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr15:32646953-32647155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr15:44073040-44073242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr15:44666618-44666416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
89, 141
               

               
Conread position:
               
166-349
               

               
Cow position:
               
chr15:30611774-30611959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr15:32491292-32491093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
167-355
               

               
Cow position:
               
chr15:13980912-13981101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
111, 65
               

               
Conread position:
               
167-357
               

               
Cow position:
               
chr15:34955507-34955696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
169-364
               

               
Cow position:
               
chr15:19654647-19654845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 99
               

               
Conread position:
               
154-364
               

               
Cow position:
               
chr16:24241165-24240952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 151
               

               
Conread position:
               
160-363
               

               
Cow position:
               
chr16:23985554-23985760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
112, 144
               

               
Conread position:
               
160-364
               

               
Cow position:
               
chr16:10373192-10372986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
104, 144
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr16:21189503-21189695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:2408649-2408447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:3148785-3148583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
109, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:8813856-8813655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:12535693-12535491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:17111497-17111699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:19081297-19081499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:24621452-24621250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:25444123-25444325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:27593577-27593375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:28206866-28206664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:40293925-40293723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:42210741-42210943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:43895017-43894815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr16:54479451-54479653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
166-364
               

               
Cow position:
               
chr16:41823058-41823253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
187, 31
               

               
Conread position:
               
179-363
               

               
Cow position:
               
chr16:37053299-37053485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
85, 125
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr17:29825166-29824954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
162-363
               

               
Cow position:
               
chr17:18100271-18100067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
90, 143
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr17:6071340-6071542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
89, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr17:20545943-20546144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr17:21770485-21770687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr17:22106830-22106628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 140
               

               
Conread position:
               
165-363
               

               
Cow position:
               
chr17:2265002-2265202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
99, 139
               

               
Conread position:
               
165-363
               

               
Cow position:
               
chr17:29950022-29950221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
106, 139
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr17:15709185-15708996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
92, 138
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr17:15719151-15719340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
92, 138
               

               
Conread position:
               
166-359
               

               
Cow position:
               
chr17:10286049-10285858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr17:29820943-29821140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
113, 127
               

               
Conread position:
               
166-365
               

               
Cow position:
               
chr17:35999899-35999701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
145-359
               

               
Cow position:
               
chr18:36455676-36455893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
163-357
               

               
Cow position:
               
chr18:27989785-27989979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 141
               

               
Conread position:
               
163-359
               

               
Cow position:
               
chr18:54032746-54032943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
106, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr18:6733934-6733732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr18:10222059-10222260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 81
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr18:23802052-23802253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 104
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr18:32437073-32436871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr18:51663204-51663407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
166-352
               

               
Cow position:
               
chr18:37540746-37540932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
111, 143
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr18:51330877-51331074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
191, 134
               

               
Conread position:
               
168-359
               

               
Cow position:
               
chr18:3893953-3893769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
111, 28
               

               
Conread position:
               
168-359
               

               
Cow position:
               
chr18:30847015-30846825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 91
               

               
Conread position:
               
130-363
               

               
Cow position:
               
chr19:15070311-15070547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
24, 175
               

               
Conread position:
               
153-355
               

               
Cow position:
               
chr19:15871615-15871412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 151
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr19:48533762-48533954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr19:207534-207736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr19:19388868-19389070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr19:29393376-29393578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr19:33119690-33119488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr19:30037870-30037681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-357
               

               
Cow position:
               
chr19:48875506-48875695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
174-355
               

               
Cow position:
               
chr19:36999177-36999002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 124
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr20:15799963-15799771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-357
               

               
Cow position:
               
chr20:12435398-12435207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
134, 74
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr20:12568319-12568117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
89, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr20:20092296-20092498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr20:24542423-24542625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr20:34231859-34231657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr20:35159585-35159383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
166-353
               

               
Cow position:
               
chr20:21836997-21837185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr20:23393012-23392823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr20:33597964-33597775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr20:42085533-42085732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
166-364
               

               
Cow position:
               
chr20:40007655-40007455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
169-367
               

               
Cow position:
               
chr20:8094717-8094519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 76
               

               
Conread position:
               
162-363
               

               
Cow position:
               
chr21:7048076-7047870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
96, 142
               

               
Conread position:
               
162-363
               

               
Cow position:
               
chr21:33317260-33317057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
109, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr21:36535101-36534909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr21:41796613-41796422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr21:1195646-1195848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr21:10570394-10570596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr21:10853372-10853574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr21:27066492-27066290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr21:35024470-35024672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr21:39470658-39470456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr21:47648447-47648649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
134, 141
               

               
Conread position:
               
165-357
               

               
Cow position:
               
chr21:40082646-40082839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
113, 175
               

               
Conread position:
               
166-358
               

               
Cow position:
               
chr21:32895109-32894919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
168-363
               

               
Cow position:
               
chr21:19534861-19534666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
112, 75
               

               
Conread position:
               
184-359
               

               
Cow position:
               
chr21:2389031-2389205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
173, 79
               

               
Conread position:
               
185-357
               

               
Cow position:
               
chr21:13189063-13189236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
205-359
               

               
Cow position:
               
chr21:13274741-13274896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr22:10907281-10907069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr22:540069-540271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr22:3275423-3275221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr22:3434029-3433827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr22:22106977-22107179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr22:22607092-22607294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr22:31315478-31315679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr22:39465607-39465405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 124
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr22:42994107-42994309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr22:43235771-43235973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr22:44381524-44381322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr22:45280883-45281085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr22:8486936-8486747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr22:19140767-19140579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr22:36852896-36852710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 9
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr22:39902318-39902507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-359
               

               
Cow position:
               
chr22:41169833-41170027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 127
               

               
Conread position:
               
166-364
               

               
Cow position:
               
chr22:8258975-8258780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
113, 126
               

               
Conread position:
               
167-363
               

               
Cow position:
               
chr22:15309025-15308827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
104, 137
               

               
Conread position:
               
198-363
               

               
Cow position:
               
chr22:27315839-27315674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
159, 104
               

               
Conread position:
               
138-363
               

               
Cow position:
               
chr23:5440821-5441047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
156-363
               

               
Cow position:
               
chr23:21772989-21772781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
201, 147
               

               
Conread position:
               
162-363
               

               
Cow position:
               
chr23:25351287-25351489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr23:37199587-37199395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr23:3285686-3285888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr23:4265688-4265486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr23:5396653-5396451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr23:5624645-5624443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr23:11079311-11079513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr23:20153294-20153092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
109, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr23:30634667-30634465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr23:31605355-31605557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr23:31703822-31704024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr23:2024157-2023954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr23:14216296-14216094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr23:27402063-27402267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
89, 142
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr23:11386114-11385927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
113, 56
               

               
Conread position:
               
184-366
               

               
Cow position:
               
chr23:9607851-9608030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr24:3162490-3162692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr24:3850615-3850817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr24:20284187-20283988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
194, 104
               

               
Conread position:
               
166-354
               

               
Cow position:
               
chr24:1295234-1295047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 18
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr24:9546195-9546384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr24:31068022-31067833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
92, 138
               

               
Conread position:
               
131-363
               

               
Cow position:
               
chr25:8875858-8875620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 177
               

               
Conread position:
               
154-334
               

               
Cow position:
               
chr25:17903616-17903795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
162-355
               

               
Cow position:
               
chr25:28862587-28862781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 142
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr25:20633484-20633686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr25:22150793-22150996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 142
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr25:13005977-13005789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr25:22197666-22197477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-364
               

               
Cow position:
               
chr25:26281745-26281945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr26:18773305-18773099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
154-355
               

               
Cow position:
               
chr26:19564374-19564175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 110
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr26:21535325-21535537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr26:26285836-26286038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr26:30594656-30594454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr26:4122644-4122833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr26:12585562-12585363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 138
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr26:34264940-34265139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr27:16031469-16031267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
166-321
               

               
Cow position:
               
chr27:615846-615694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 101
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr27:27849201-27849400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 137
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr28:21768329-21768117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
162-363
               

               
Cow position:
               
chr28:5940459-5940662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 141
               

               
Conread position:
               
162-375
               

               
Cow position:
               
chr28:6046770-6046986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr28:18517171-18516979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr28:444382-444584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr28:482734-482532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr28:2644689-2644891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr28:3189057-3188855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr28:5211096-5211298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr28:7907571-7907369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr28:23310362-23310160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr28:28928810-28929012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr28:29036678-29036476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr28:29823160-29823362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
89, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr28:30534086-30533884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr28:34730707-34730908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
95, 32
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr28:4929473-4929284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr28:5111745-5111545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 138
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr28:17391410-17391609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 138
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr28:17663972-17663773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 137
               

               
Conread position:
               
166-364
               

               
Cow position:
               
chr28:24670771-24670970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 139
               

               
Conread position:
               
163-357
               

               
Cow position:
               
chr29:1478397-1478591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr29:8624251-8624049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr29:15117881-15117679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr29:16036472-16036270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr29:21429915-21429713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr29:28657423-28657221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
95, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr29:28697433-28697232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr29:31764985-31765187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr29:40471610-40471812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr29:45462178-45462380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
89, 141
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr29:5240339-5240542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
166-349
               

               
Cow position:
               
chr29:7655459-7655283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
106-357
               

               
Cow position:
               
chr3:66736761-66736512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
164, 19
               

               
Conread position:
               
139-355
               

               
Cow position:
               
chr3:10931708-10931920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
141, 23
               

               
Conread position:
               
143-359
               

               
Cow position:
               
chr3:14881685-14881469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 52
               

               
Conread position:
               
148-363
               

               
Cow position:
               
chr3:52150441-52150225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 12
               

               
Conread position:
               
152-359
               

               
Cow position:
               
chr3:67781312-67781522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 162
               

               
Conread position:
               
161-363
               

               
Cow position:
               
chr3:36614372-36614168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 143
               

               
Conread position:
               
162-355
               

               
Cow position:
               
chr3:48603109-48603302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 142
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr3:1740014-1739822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr3:24443235-24443044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:823232-823029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:2572386-2572588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:2708010-2707808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:2866796-2866594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:6713866-6714068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:10243520-10243722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:12664792-12664994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:13723854-13723651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:29574267-29574065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:30616078-30615876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:35342509-35342711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:40048748-40048950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
109, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:41207738-41207536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
95, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:43190411-43190209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:49542342-49542140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:53518695-53518897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:56297243-56297445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:56485401-56485199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:68697106-68696904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 143
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:75038983-75038781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr3:23204814-23204612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
194, 140
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr3:38095758-38095961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 141
               

               
Conread position:
               
165-357
               

               
Cow position:
               
chr3:27222910-27223101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
113, 102
               

               
Conread position:
               
166-359
               

               
Cow position:
               
chr3:9995490-9995301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr3:49134675-49134476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr3:64317602-64317800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 127
               

               
Conread position:
               
166-364
               

               
Cow position:
               
chr3:40344096-40344296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 138
               

               
Conread position:
               
166-367
               

               
Cow position:
               
chr3:56153168-56153367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 128
               

               
Conread position:
               
166-388
               

               
Cow position:
               
chr3:48034410-48034188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 12
               

               
Conread position:
               
167-363
               

               
Cow position:
               
chr3:15416329-15416527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 137
               

               
Conread position:
               
168-361
               

               
Cow position:
               
chr3:31321200-31321391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
169-357
               

               
Cow position:
               
chr3:61554816-61554627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 129
               

               
Conread position:
               
181-355
               

               
Cow position:
               
chr3:76649229-76649054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 112
               

               
Conread position:
               
218-357
               

               
Cow position:
               
chr3:64413152-64413009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr4:3449450-3449662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
156-364
               

               
Cow position:
               
chr4:4418703-4418913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
115, 148
               

               
Conread position:
               
163-349
               

               
Cow position:
               
chr4:13464477-13464662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr4:358549-358741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr4:17033837-17033645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 140
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr4:21341737-21341929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr4:7779064-7779266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr4:9005068-9004866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr4:9356902-9357104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr4:18813546-18813344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr4:25596821-25596619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr4:29604810-29604608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr4:33020968-33020766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr4:42331057-42330855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr4:44778529-44778327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr4:36026603-36026404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr4:40697800-40697601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
140-349
               

               
Cow position:
               
chr5:48016959-48017167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
133, 99
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr5:3788982-3789194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
163-354
               

               
Cow position:
               
chr5:2917228-2917419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr5:710387-710195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr5:6455899-6455707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr5:6615528-6615327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
194, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr5:6772332-6772534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr5:37610177-37609976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr5:41066789-41066991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr5:46735512-46735310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr5:52823442-52823241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr5:46779280-46779483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 141
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr5:48805686-48805484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 123
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr5:2203624-2203435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr5:30157127-30157326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr5:47560794-47560595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-365
               

               
Cow position:
               
chr5:16960650-16960455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
190, 55
               

               
Conread position:
               
177-348
               

               
Cow position:
               
chr5:20566077-20566249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 30
               

               
Conread position:
               
150-363
               

               
Cow position:
               
chr6:57521061-57521280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 158
               

               
Conread position:
               
153-363
               

               
Cow position:
               
chr6:12663422-12663210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
111, 151
               

               
Conread position:
               
153-363
               

               
Cow position:
               
chr6:34493568-34493780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
99, 150
               

               
Conread position:
               
154-355
               

               
Cow position:
               
chr6:8755924-8755722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
163-354
               

               
Cow position:
               
chr6:28102962-28102773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr6:1507607-1507415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr6:10044118-10044310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr6:20450863-20451055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr6:22737804-22737611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr6:27761605-27761797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr6:50485870-50485678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr6:58030683-58030874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr6:60379066-60379258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 140
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr6:67553136-67553327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:916946-917148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:3886603-3886399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 142
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:18520179-18519977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:22044105-22043903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:27151538-27151336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
95, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:30270000-30269798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:33490151-33489949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:34504618-34504416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
89, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:34843810-34843608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:43620634-43620836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:43778422-43778624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:45724242-45724040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 100
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:56452192-56451990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:60332246-60332448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr6:62664678-62664880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr6:41408308-41408511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 140
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr6:20351183-20350994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr6:9234418-9234617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr6:25217860-25218058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
191, 137
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr6:49826346-49826147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
167-363
               

               
Cow position:
               
chr6:2452755-2452951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
190, 136
               

               
Conread position:
               
167-363
               

               
Cow position:
               
chr6:39999550-39999352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 120
               

               
Conread position:
               
168-357
               

               
Cow position:
               
chr6:30805965-30805781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
103, 125
               

               
Conread position:
               
180-355
               

               
Cow position:
               
chr6:66238120-66238295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
99, 113
               

               
Conread position:
               
154-355
               

               
Cow position:
               
chr7:21989619-21989821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
154-357
               

               
Cow position:
               
chr7:47190756-47190554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr7:6207582-6207785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 8
               

               
Conread position:
               
154-363
               

               
Cow position:
               
chr7:34488891-34489103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
156-363
               

               
Cow position:
               
chr7:982608-982398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
8, 149
               

               
Conread position:
               
162-370
               

               
Cow position:
               
chr7:66299159-66298950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 142
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr7:10428425-10428233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr7:49826096-49825904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr7:12917-12715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr7:194909-194707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr7:900256-900054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr7:1331419-1331217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr7:5304991-5304789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr7:14135855-14135653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr7:34151936-34152138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr7:35920317-35920115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr7:65557423-65557221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr7:443265-443062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr7:36343788-36343585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-367
               

               
Cow position:
               
chr7:39850397-39850191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
166-349
               

               
Cow position:
               
chr7:30042981-30043165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
166-357
               

               
Cow position:
               
chr7:39397508-39397321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 64
               

               
Conread position:
               
166-357
               

               
Cow position:
               
chr7:46192469-46192655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
112, 32
               

               
Conread position:
               
166-359
               

               
Cow position:
               
chr7:21877719-21877527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr7:844919-845118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
168-359
               

               
Cow position:
               
chr7:38692920-38693115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 137
               

               
Conread position:
               
179-357
               

               
Cow position:
               
chr7:1010021-1009845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
180-357
               

               
Cow position:
               
chr7:57653910-57654086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
99, 120
               

               
Conread position:
               
204-355
               

               
Cow position:
               
chr7:1595966-1595814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
158-363
               

               
Cow position:
               
chr8:38629218-38629425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 146
               

               
Conread position:
               
163-354
               

               
Cow position:
               
chr8:7051610-7051799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr8:816663-816855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr8:45337985-45337793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr8:1570302-1570504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr8:5020185-5020387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr8:12078630-12078428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr8:12287114-12287314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr8:12446217-12446015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr8:14925707-14925505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr8:21091152-21090950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr8:25413790-25413992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr8:41659632-41659429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 142
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr8:42318089-42317887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr8:47659152-47658950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr8:51254469-51254267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr8:60067059-60067260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 79
               

               
Conread position:
               
163-367
               

               
Cow position:
               
chr8:26878720-26878926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-367
               

               
Cow position:
               
chr8:38089152-38089358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr8:56508441-56508252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
166-359
               

               
Cow position:
               
chr8:56255777-56255972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
167-363
               

               
Cow position:
               
chr8:39140827-39141025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
97, 137
               

               
Conread position:
               
172-355
               

               
Cow position:
               
chr8:39516833-39516650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
99, 132
               

               
Conread position:
               
140-355
               

               
Cow position:
               
chr9:2527097-2527312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
124, 164
               

               
Conread position:
               
145-366
               

               
Cow position:
               
chr9:11439867-11439648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
152-355
               

               
Cow position:
               
chr9:24918468-24918264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 153
               

               
Conread position:
               
162-355
               

               
Cow position:
               
chr9:48851356-48851164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
5, 132
               

               
Conread position:
               
163-353
               

               
Cow position:
               
chr9:30674907-30675097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr9:34059801-34059609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr9:1249165-1248963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr9:2856676-2856878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
115, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr9:7104399-7104197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 124
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr9:10856852-10857054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr9:17017586-17017788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr9:18539495-18539697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr9:19156461-19156258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr9:26325578-26325780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr9:27897840-27898040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
194, 53
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr9:31810410-31810611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr9:38633612-38633814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
108, 142
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr9:50003280-50003482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr9:56176602-56176804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
163-366
               

               
Cow position:
               
chr9:27037940-27038145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 125
               

               
Conread position:
               
163-370
               

               
Cow position:
               
chr9:9094339-9094546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
166-349
               

               
Cow position:
               
chr9:23602736-23602919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr9:41507011-41506822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
166-357
               

               
Cow position:
               
chr9:49513087-49512889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
166-363
               

               
Cow position:
               
chr9:3052147-3051948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
166-364
               

               
Cow position:
               
chr9:5452805-5452605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
98, 138
               
146-364UCSC Genome Browser

               
Conread position:
               

               

               
Cow position:
               
chrX:16278383-16278599 (view  custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
118, 51
               
154-343UCSC Genome Browser

               
               
               
Conread position:

               
               
               
Cow position:
chrX:19396962-19397153 (view  custom track)

               
               
               
Alignm length:
192

               
               
               
Alignm identity:
135

               
               
               
Alignm E-value:
3e-26

               
               
               
Alignm gaps (pig, cow):
10, 0
154-365UCSC Genome Browser

               
               
               
Conread position:

               
               
               
Cow position:
chrX:39387740-39387523 (view  custom track)

               
               
               
Alignm length:
219

               
               
               
Alignm identity:
153

               
               
               
Alignm E-value:
8e-26

               
               
               
Alignm gaps (pig, cow):
13, 151

               
               
               Conread position:162-363
               
               
               Cow position:chrX:4623214-4623011 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):102, 142

               
               
               Conread position:163-329
               
               
               Cow position:chrX:13800978-13800813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):115, 95

               
               
               Conread position:163-355
               
               
               Cow position:chrX:29225218-29225410 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):101, 141

               
               
               Conread position:163-357
               
               
               Cow position:chrX:26231018-26230824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):101, 141

               
               
               Conread position:163-357
               
               
               Cow position:chrX:27304671-27304865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):101, 141

               
               
               Conread position:163-357
               
               
               Cow position:chrX:38231527-38231333 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):101, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:4342492-4342693 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:139
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):101, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:5289944-5289742 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):101, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:5865886-5866088 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):108, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:7484547-7484749 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):101, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:12144839-12145041 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):101, 143

               
               
               Conread position:163-363
               
               
               Cow position:chrX:14462061-14462262 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:139
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):101, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:15978211-15978009 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):101, 143

               
               
               Conread position:163-363
               
               
               Cow position:chrX:18193430-18193632 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:140
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):108, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:19398518-19398720 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):101, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:21892248-21892450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):101, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:22837722-22837924 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):109, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:23279767-23279969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:140
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):108, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:26755899-26755697 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):108, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:27317971-27318173 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):108, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:32145516-32145313 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):108, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:35532596-35532798 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):101, 141

               
               
               Conread position:163-363
               
               
               Cow position:chrX:36535989-36535787 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):95, 141

               
               
               Conread position:163-364
               
               
               Cow position:chrX:11951030-11950827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):89, 141

               
               
               Conread position:163-364
               
               
               Cow position:chrX:16854625-16854422 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):108, 141

               
               
               Conread position:163-364
               
               
               Cow position:chrX:26530713-26530916 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):89, 141

               
               
               Conread position:165-349
               
               
               Cow position:chrX:37753168-37753349 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):94, 79

               
               
               Conread position:166-337
               
               
               Cow position:chrX:16407295-16407466 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:123
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):112, 135

               
               
               Conread position:166-353
               
               
               Cow position:chrX:23269444-23269259 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:135
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):113, 32

               
               
               Conread position:166-354
               
               
               Cow position:chrX:25052178-25051991 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:134
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):84, 64

               
               
               Conread position:166-355
               
               
               Cow position:chrX:302862-303049 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):110, 78

               
               
               Conread position:166-355
               
               
               Cow position:chrX:26341458-26341271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:137
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):113, 92

               
               
               Conread position:166-355
               
               
               Cow position:chrX:30435875-30435686 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:129
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):105, 138

               
               
               Conread position:166-355
               
               
               Cow position:chrX:34094449-34094638 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:131
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):105, 138

               
               
               Conread position:166-359
               
               
               Cow position:chrX:21658292-21658486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):108, 159

               
               
               Conread position:166-359
               
               
               Cow position:chrX:25016443-25016248 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:141
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):113, 0

               
               
               Conread position:166-363
               
               
               Cow position:chrX:15349470-15349271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):98, 138

               
               
               Conread position:166-363
               
               
               Cow position:chrX:39745999-39746197 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):112, 137

               
               
               Conread position:167-357
               
               
               Cow position:chrX:21206944-21206756 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:139
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):113, 77

               
               
               Conread position:167-363
               
               
               Cow position:chrX:387878-388074 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):109, 77

               
               
               Conread position:168-359
               
               
               Cow position:chrX:18289338-18289148 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:143
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):110, 99

               
               
               Conread position:168-363
               
               
               Cow position:chrX:16858928-16858730 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):134, 0

               
               
               Conread position:169-357
               
               
               Cow position:chrX:33997283-33997469 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:130
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):109, 21

               
               
               Conread position:189-355
               
               
               Cow position:chrX:23906857-23906694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:125
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):89, 112

               
               
               Conread position:194-340
               
               
               Cow position:chrX:19650893-19650748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:109
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):85, 103