Cow genome map

Conread name: Pla1-C0000936_N20

Conread position: 1-357
Cow position: chr1:67009275-67008906 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 101, 50

Conread position: 1-377
Cow position: chr1:63260782-63260395 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 371

Conread position: 1-377
Cow position: chr1:89766826-89766432 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 276
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 110, 301

Conread position: 1-383
Cow position: chr1:85028419-85028818 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 94

Conread position: 1-383
Cow position: chr1:85865254-85865643 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 271

Conread position: 2-329
Cow position: chr1:82091612-82091955 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 179

Conread position: 2-361
Cow position: chr1:101792631-101792261 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 99

Conread position: 2-375
Cow position: chr1:73443166-73442769 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 2-377
Cow position: chr1:58419380-58419785 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 2-377
Cow position: chr1:78795283-78794883 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 274
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 118, 56

Conread position: 2-377
Cow position: chr1:80184282-80183886 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 90

Conread position: 2-377
Cow position: chr1:101776136-101776517 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 266
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 137, 33

Conread position: 2-381
Cow position: chr1:22728505-22728904 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 183

Conread position: 2-381
Cow position: chr1:38687932-38688331 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 384

Conread position: 2-381
Cow position: chr1:57576308-57575912 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 54, 15

Conread position: 2-382
Cow position: chr1:22637934-22637542 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 41

Conread position: 2-382
Cow position: chr1:44154730-44155119 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 95

Conread position: 2-383
Cow position: chr1:15333372-15333736 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 150, 23

Conread position: 2-383
Cow position: chr1:58340632-58341032 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 278
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 150, 132

Conread position: 2-383
Cow position: chr1:97075785-97075378 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 349

Conread position: 3-283
Cow position: chr1:56476848-56477136 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 130, 21

Conread position: 4-382
Cow position: chr1:63049285-63049684 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 336

Conread position: 5-205
Cow position: chr1:40292434-40292231 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 148, 98

Conread position: 8-377
Cow position: chr1:36613823-36613422 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 82

Conread position: 8-383
Cow position: chr1:99224289-99223891 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 11-309
Cow position: chr1:91799518-91799201 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 57

Conread position: 11-383
Cow position: chr1:81859748-81859372 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 92

Conread position: 13-375
Cow position: chr1:35768918-35769294 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 14, 55

Conread position: 15-282
Cow position: chr1:43650182-43649915 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 87, 120

Conread position: 16-381
Cow position: chr1:51983075-51983440 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 96

Conread position: 19-337
Cow position: chr1:37646799-37646459 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 167

Conread position: 19-381
Cow position: chr1:41004891-41004510 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 314

Conread position: 24-343
Cow position: chr1:4368606-4368266 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 26-361
Cow position: chr1:3963102-3963455 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 157

Conread position: 32-381
Cow position: chr1:64678196-64678554 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 183

Conread position: 42-277
Cow position: chr1:61742928-61742688 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 113

Conread position: 42-303
Cow position: chr1:76860277-76859994 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 62

Conread position: 42-377
Cow position: chr1:31341558-31341201 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 48-377
Cow position: chr1:58067202-58066853 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 104, 135

Conread position: 53-383
Cow position: chr1:99136921-99136572 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 80

Conread position: 61-377
Cow position: chr1:6462834-6462498 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 91, 14

Conread position: 79-373
Cow position: chr1:63391238-63390925 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 73, 241

Conread position: 103-383
Cow position: chr1:71946806-71946517 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 49, 84

Conread position: 103-383
Cow position: chr1:89834803-89835090 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 72, 49

Conread position: 108-369
Cow position: chr1:54258135-54258412 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 44, 76

Conread position: 147-383
Cow position: chr1:6760404-6760159 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 59, 26

Conread position: 149-380
Cow position: chr1:3035375-3035141 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 95

Conread position: 150-375
Cow position: chr1:58191695-58191461 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 23

Conread position: 150-379
Cow position: chr1:41138737-41138500 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 150-384
Cow position: chr1:54484675-54484927 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 8, 24

Conread position: 153-353
Cow position: chr1:52384662-52384450 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 20

Conread position: 153-371
Cow position: chr1:8349689-8349464 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 53, 107

Conread position: 153-383
Cow position: chr1:46218199-46218440 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 53, 218

Conread position: 154-377
Cow position: chr1:79632477-79632244 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 19

Conread position: 154-381
Cow position: chr1:12222985-12222752 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 18

Conread position: 168-377
Cow position: chr1:76938364-76938144 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 168-381
Cow position: chr1:25183756-25183982 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 168-383
Cow position: chr1:42869518-42869297 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 133

Conread position: 169-350
Cow position: chr1:98412585-98412767 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 128, 0

Conread position: 175-377
Cow position: chr1:35491936-35491729 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 196

Conread position: 1-346
Cow position: chr10:54469951-54469592 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 177

Conread position: 1-357
Cow position: chr10:10046605-10046246 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 151, 55

Conread position: 1-357
Cow position: chr10:46195225-46195594 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 55

Conread position: 1-375
Cow position: chr10:42346995-42346605 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 45

Conread position: 1-377
Cow position: chr10:21656853-21657242 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 111

Conread position: 1-377
Cow position: chr10:56106464-56106860 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 183

Conread position: 1-379
Cow position: chr10:6012599-6012211 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 173

Conread position: 1-381
Cow position: chr10:29091169-29090776 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 175

Conread position: 1-381
Cow position: chr10:29628531-29628124 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 1-383
Cow position: chr10:37913726-37913356 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 38

Conread position: 2-275
Cow position: chr10:57460731-57461017 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 150, 101

Conread position: 2-340
Cow position: chr10:40255988-40256318 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 204, 101

Conread position: 2-344
Cow position: chr10:1723357-1723692 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 253, 162

Conread position: 2-352
Cow position: chr10:6243010-6242647 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 95

Conread position: 2-354
Cow position: chr10:47773163-47773533 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 37

Conread position: 2-357
Cow position: chr10:19372893-19372526 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 2-361
Cow position: chr10:41626034-41626414 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 15

Conread position: 2-361
Cow position: chr10:53908281-53907912 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 126

Conread position: 2-375
Cow position: chr10:17221933-17221539 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-380
Cow position: chr10:30456432-30456031 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 136

Conread position: 2-381
Cow position: chr10:19294885-19294486 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-381
Cow position: chr10:22320961-22321345 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 276
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 128, 107

Conread position: 2-381
Cow position: chr10:46664347-46664747 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 348

Conread position: 2-383
Cow position: chr10:8459949-8460354 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 185

Conread position: 2-383
Cow position: chr10:10082339-10081941 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 150, 36

Conread position: 2-383
Cow position: chr10:23412788-23413185 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 177

Conread position: 2-383
Cow position: chr10:31669998-31670392 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 41

Conread position: 2-383
Cow position: chr10:40270067-40270434 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 101

Conread position: 2-383
Cow position: chr10:42124392-42123989 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 283
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 27, 172

Conread position: 2-383
Cow position: chr10:51559143-51559545 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 344

Conread position: 2-383
Cow position: chr10:52151948-52152351 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 3-381
Cow position: chr10:31182437-31182056 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 150

Conread position: 3-383
Cow position: chr10:18041606-18042013 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 180

Conread position: 3-383
Cow position: chr10:20735138-20735536 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 22

Conread position: 4-382
Cow position: chr10:34660784-34660392 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 29

Conread position: 5-377
Cow position: chr10:30281622-30282015 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 29

Conread position: 11-374
Cow position: chr10:31527444-31527813 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 259
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 115, 92

Conread position: 11-384
Cow position: chr10:33215235-33215626 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 40

Conread position: 12-362
Cow position: chr10:14788083-14787729 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 120, 91

Conread position: 13-360
Cow position: chr10:20446542-20446905 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 171

Conread position: 16-381
Cow position: chr10:13311169-13311558 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 174

Conread position: 18-381
Cow position: chr10:44680962-44681344 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 166

Conread position: 33-355
Cow position: chr10:6529660-6529999 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 6

Conread position: 33-383
Cow position: chr10:20133084-20132700 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 38, 70

Conread position: 34-383
Cow position: chr10:46829332-46829701 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 265
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 93, 217

Conread position: 35-382
Cow position: chr10:38943713-38944086 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 33

Conread position: 36-383
Cow position: chr10:22390058-22390413 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 67

Conread position: 38-381
Cow position: chr10:48462876-48462516 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 8

Conread position: 42-383
Cow position: chr10:4586893-4586534 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 293

Conread position: 43-354
Cow position: chr10:29339927-29339598 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 96, 44

Conread position: 48-383
Cow position: chr10:59664485-59664142 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 126

Conread position: 53-383
Cow position: chr10:29322361-29322705 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 132

Conread position: 54-381
Cow position: chr10:15927128-15926780 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 98, 323

Conread position: 65-377
Cow position: chr10:54141376-54141706 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 301

Conread position: 79-371
Cow position: chr10:59588669-59588351 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 60, 22

Conread position: 79-383
Cow position: chr10:41396969-41397308 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 104-371
Cow position: chr10:55622596-55622310 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 104-383
Cow position: chr10:16740536-16740229 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 217

Conread position: 115-381
Cow position: chr10:15818252-15817970 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 147

Conread position: 149-291
Cow position: chr10:13765817-13765668 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 57, 24

Conread position: 149-383
Cow position: chr10:61588675-61588434 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 56, 24

Conread position: 150-377
Cow position: chr10:1427625-1427862 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 162

Conread position: 150-379
Cow position: chr10:52046451-52046685 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 23

Conread position: 150-383
Cow position: chr10:5264287-5264528 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 57, 12

Conread position: 153-381
Cow position: chr10:22471901-22472141 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 20

Conread position: 162-383
Cow position: chr10:27541121-27541349 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 11

Conread position: 163-383
Cow position: chr10:32393619-32393849 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 131

Conread position: 168-381
Cow position: chr10:24870766-24870987 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 38, 203

Conread position: 168-382
Cow position: chr10:36001808-36002028 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 145

Conread position: 1-362
Cow position: chr11:21798380-21798763 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 189

Conread position: 1-381
Cow position: chr11:50153383-50152987 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 137

Conread position: 1-383
Cow position: chr11:62376996-62376604 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 23

Conread position: 2-264
Cow position: chr11:62225424-62225693 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 34

Conread position: 2-305
Cow position: chr11:7719129-7718805 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 2-373
Cow position: chr11:17890291-17889902 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 113

Conread position: 2-377
Cow position: chr11:26067747-26067352 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 31

Conread position: 2-377
Cow position: chr11:64029804-64029429 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 135

Conread position: 2-377
Cow position: chr11:66943528-66943131 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 357

Conread position: 2-381
Cow position: chr11:63847294-63847681 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 307

Conread position: 2-382
Cow position: chr11:4384061-4384457 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 182

Conread position: 2-383
Cow position: chr11:1486437-1486033 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 15

Conread position: 2-383
Cow position: chr11:38649015-38649412 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 177

Conread position: 2-383
Cow position: chr11:58399700-58400097 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 282

Conread position: 2-383
Cow position: chr11:68571240-68570839 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 3-328
Cow position: chr11:44915305-44914957 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 84

Conread position: 3-377
Cow position: chr11:68130768-68131163 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 184

Conread position: 4-381
Cow position: chr11:44031433-44031831 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 72

Conread position: 5-381
Cow position: chr11:74929212-74929611 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 182

Conread position: 8-381
Cow position: chr11:61455099-61454703 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 171

Conread position: 19-375
Cow position: chr11:40467673-40467298 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 20-215
Cow position: chr11:39498557-39498754 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 132, 31

Conread position: 39-381
Cow position: chr11:17321137-17321489 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 138

Conread position: 41-377
Cow position: chr11:19216472-19216119 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 271

Conread position: 79-375
Cow position: chr11:76370010-76369693 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 73, 105

Conread position: 120-361
Cow position: chr11:53147978-53147729 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 31

Conread position: 136-383
Cow position: chr11:17860574-17860320 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 70, 8

Conread position: 150-381
Cow position: chr11:78480389-78480629 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 107

Conread position: 151-377
Cow position: chr11:15467059-15467297 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 152-377
Cow position: chr11:68327460-68327223 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 53, 21

Conread position: 153-383
Cow position: chr11:7924991-7924756 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 51, 20

Conread position: 166-383
Cow position: chr11:27907162-27907386 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 40, 92

Conread position: 167-349
Cow position: chr11:21371436-21371247 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 169-381
Cow position: chr11:23251995-23251772 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-205
Cow position: chr12:11558481-11558278 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 151, 85

Conread position: 1-258
Cow position: chr12:30687734-30687998 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 173

Conread position: 1-346
Cow position: chr12:34673913-34673553 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 178

Conread position: 1-373
Cow position: chr12:19868878-19869275 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 72

Conread position: 2-277
Cow position: chr12:7065298-7065581 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 202, 124

Conread position: 2-356
Cow position: chr12:35311268-35310886 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 2-357
Cow position: chr12:3038929-3039302 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 84

Conread position: 2-376
Cow position: chr12:1006411-1006025 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 64

Conread position: 2-377
Cow position: chr12:31742355-31741962 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 183

Conread position: 2-381
Cow position: chr12:2242476-2242073 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 101

Conread position: 2-381
Cow position: chr12:2285992-2286393 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 171

Conread position: 3-323
Cow position: chr12:24440225-24440566 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 181

Conread position: 4-382
Cow position: chr12:21497253-21496852 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 16

Conread position: 13-381
Cow position: chr12:33297296-33297657 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 24, 108

Conread position: 19-384
Cow position: chr12:37770300-37770690 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 165

Conread position: 37-381
Cow position: chr12:38678140-38678510 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 17

Conread position: 75-383
Cow position: chr12:15078933-15079261 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 77, 109

Conread position: 77-389
Cow position: chr12:8487851-8487509 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 187

Conread position: 97-383
Cow position: chr12:27993318-27993011 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 101-375
Cow position: chr12:30605615-30605350 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 198, 51

Conread position: 106-377
Cow position: chr12:36501430-36501144 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 80

Conread position: 108-357
Cow position: chr12:7977571-7977835 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 44, 76

Conread position: 153-381
Cow position: chr12:15089065-15089306 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 20

Conread position: 162-377
Cow position: chr12:39176771-39176996 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 11

Conread position: 162-377
Cow position: chr12:40158653-40158432 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 11

Conread position: 162-383
Cow position: chr12:25878595-25878825 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 11

Conread position: 164-334
Cow position: chr12:45802115-45801934 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 168-381
Cow position: chr12:38774830-38775061 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 169-377
Cow position: chr12:35718465-35718252 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 137

Conread position: 1-258
Cow position: chr13:30694526-30694267 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 151, 24

Conread position: 1-383
Cow position: chr13:34262847-34263236 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 137

Conread position: 2-310
Cow position: chr13:11148285-11147968 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 130, 83

Conread position: 2-371
Cow position: chr13:26079976-26079595 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 150, 40

Conread position: 2-375
Cow position: chr13:49977126-49977520 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-377
Cow position: chr13:11795246-11794847 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 183

Conread position: 2-377
Cow position: chr13:12978089-12977703 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 101

Conread position: 2-377
Cow position: chr13:20377798-20378199 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 294
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 34

Conread position: 2-377
Cow position: chr13:34941124-34941517 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 47

Conread position: 2-380
Cow position: chr13:38283445-38283848 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 188

Conread position: 2-381
Cow position: chr13:12616289-12615891 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 115

Conread position: 2-381
Cow position: chr13:25453699-25453305 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 52

Conread position: 2-381
Cow position: chr13:34282218-34281815 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 185

Conread position: 2-383
Cow position: chr13:995564-995936 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 271
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 204, 23

Conread position: 2-383
Cow position: chr13:20605587-20605986 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 110

Conread position: 3-383
Cow position: chr13:22085226-22085618 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 70

Conread position: 4-375
Cow position: chr13:1011865-1011473 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 13-369
Cow position: chr13:25434601-25434982 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 134

Conread position: 19-383
Cow position: chr13:19426181-19426561 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 50

Conread position: 31-362
Cow position: chr13:43762669-43762319 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 122, 70

Conread position: 31-377
Cow position: chr13:20665883-20666247 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 294

Conread position: 49-264
Cow position: chr13:21210415-21210185 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 102, 13

Conread position: 56-375
Cow position: chr13:51527966-51528306 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 128

Conread position: 56-381
Cow position: chr13:10928512-10928855 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 30

Conread position: 77-381
Cow position: chr13:25062878-25062545 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 16, 23

Conread position: 86-357
Cow position: chr13:47313348-47313067 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 99

Conread position: 103-383
Cow position: chr13:20879402-20879698 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 233

Conread position: 120-381
Cow position: chr13:14544528-14544257 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 32, 141

Conread position: 149-357
Cow position: chr13:18215807-18215585 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 9

Conread position: 149-375
Cow position: chr13:51856261-51856497 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 23

Conread position: 149-377
Cow position: chr13:46516439-46516211 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 55, 24

Conread position: 149-380
Cow position: chr13:6606643-6606881 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 58, 24

Conread position: 153-377
Cow position: chr13:2186265-2186489 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 9

Conread position: 162-383
Cow position: chr13:32921411-32921180 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 10

Conread position: 168-377
Cow position: chr13:1170826-1170611 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 44, 197

Conread position: 168-381
Cow position: chr13:1042597-1042822 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 168-383
Cow position: chr13:21276215-21275988 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 170-356
Cow position: chr13:28653188-28652992 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 174-369
Cow position: chr13:28570190-28569980 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 1-309
Cow position: chr14:46085331-46085653 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 102

Conread position: 1-376
Cow position: chr14:46178669-46179066 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 1-376
Cow position: chr14:47507687-47507302 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 48

Conread position: 1-377
Cow position: chr14:13723010-13723402 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 47

Conread position: 1-381
Cow position: chr14:20640034-20640431 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 155

Conread position: 2-356
Cow position: chr14:40346585-40346957 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 365

Conread position: 2-377
Cow position: chr14:1727470-1727867 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 183

Conread position: 2-377
Cow position: chr14:12483724-12484106 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 101

Conread position: 2-381
Cow position: chr14:16525461-16525071 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 192

Conread position: 2-381
Cow position: chr14:46435235-46435636 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 2-381
Cow position: chr14:46533281-46532868 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 96, 0

Conread position: 2-383
Cow position: chr14:28138151-28137749 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 184

Conread position: 2-383
Cow position: chr14:37883322-37883728 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 184

Conread position: 3-384
Cow position: chr14:22380964-22381365 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 48

Conread position: 8-383
Cow position: chr14:40230052-40230446 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 105

Conread position: 11-383
Cow position: chr14:7960350-7959956 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 141, 260

Conread position: 25-371
Cow position: chr14:17756124-17755761 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 19

Conread position: 28-381
Cow position: chr14:24894318-24893953 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 30

Conread position: 31-381
Cow position: chr14:35543952-35544322 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 153

Conread position: 32-375
Cow position: chr14:19818938-19818576 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 152

Conread position: 33-383
Cow position: chr14:41749211-41749568 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 191

Conread position: 35-383
Cow position: chr14:35650640-35651015 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 309

Conread position: 40-377
Cow position: chr14:14326552-14326907 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 99

Conread position: 42-377
Cow position: chr14:6599400-6599755 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 61

Conread position: 42-381
Cow position: chr14:49824098-49824434 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 164, 121

Conread position: 48-381
Cow position: chr14:28988237-28987888 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 136

Conread position: 53-362
Cow position: chr14:46653961-46654286 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 99, 250

Conread position: 66-346
Cow position: chr14:28708556-28708260 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 86, 111

Conread position: 68-381
Cow position: chr14:13360914-13361237 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 101, 84

Conread position: 76-377
Cow position: chr14:44121848-44121542 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 41

Conread position: 110-383
Cow position: chr14:39779231-39778944 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 42, 74

Conread position: 113-388
Cow position: chr14:23645392-23645100 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 149-381
Cow position: chr14:13006939-13006704 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 24

Conread position: 153-377
Cow position: chr14:7647607-7647842 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 20

Conread position: 153-381
Cow position: chr14:19222312-19222075 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 53, 20

Conread position: 153-381
Cow position: chr14:22982319-22982077 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 20

Conread position: 153-381
Cow position: chr14:39807031-39807266 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 20

Conread position: 162-383
Cow position: chr14:45042615-45042384 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 44, 11

Conread position: 165-383
Cow position: chr14:35509555-35509779 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 170

Conread position: 167-380
Cow position: chr14:21285040-21284824 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 39, 0

Conread position: 167-383
Cow position: chr14:34096174-34096404 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 168-339
Cow position: chr14:20300205-20300387 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 168-377
Cow position: chr14:37624071-37624291 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 72

Conread position: 168-381
Cow position: chr14:20009902-20010118 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 40, 17

Conread position: 168-383
Cow position: chr14:10697112-10697335 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 168-383
Cow position: chr14:24683722-24683938 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 136

Conread position: 170-377
Cow position: chr14:22918773-22918553 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 148

Conread position: 1-310
Cow position: chr15:21910753-21910438 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 176

Conread position: 1-316
Cow position: chr15:30985155-30985493 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 1-381
Cow position: chr15:10336382-10335998 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 112

Conread position: 1-381
Cow position: chr15:10441952-10442354 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 382

Conread position: 2-275
Cow position: chr15:38395255-38394968 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 2-282
Cow position: chr15:6366788-6366494 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 159, 0

Conread position: 2-301
Cow position: chr15:27711785-27711469 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 2-353
Cow position: chr15:31993163-31992793 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 44

Conread position: 2-354
Cow position: chr15:13683658-13684018 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 69

Conread position: 2-366
Cow position: chr15:22095745-22095375 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 48

Conread position: 2-371
Cow position: chr15:37382262-37381880 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 271

Conread position: 2-375
Cow position: chr15:21152491-21152097 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-377
Cow position: chr15:47891982-47892369 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 163

Conread position: 2-381
Cow position: chr15:4642529-4642930 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 345

Conread position: 2-381
Cow position: chr15:23703405-23703012 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 264

Conread position: 2-382
Cow position: chr15:21902805-21903206 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 78

Conread position: 2-383
Cow position: chr15:20458663-20459063 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 3-371
Cow position: chr15:32226253-32226637 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 105

Conread position: 3-383
Cow position: chr15:33605564-33605159 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 333

Conread position: 4-377
Cow position: chr15:38969768-38969377 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 148, 65

Conread position: 13-205
Cow position: chr15:10569989-10570183 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 118, 53

Conread position: 13-377
Cow position: chr15:33313817-33314200 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 336

Conread position: 15-314
Cow position: chr15:33511470-33511150 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 19

Conread position: 31-377
Cow position: chr15:21913756-21913388 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 257
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 78, 154

Conread position: 36-357
Cow position: chr15:38846692-38846359 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 78

Conread position: 48-380
Cow position: chr15:21388579-21388924 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 135

Conread position: 59-383
Cow position: chr15:41087282-41087625 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 73-361
Cow position: chr15:276311-276013 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 111

Conread position: 74-381
Cow position: chr15:40797863-40798186 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 51

Conread position: 101-377
Cow position: chr15:7264515-7264796 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 105, 52

Conread position: 121-344
Cow position: chr15:23531243-23531001 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 63

Conread position: 149-361
Cow position: chr15:24037929-24038150 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 59, 24

Conread position: 149-375
Cow position: chr15:29542478-29542243 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 13

Conread position: 154-342
Cow position: chr15:17477294-17477097 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 57, 19

Conread position: 166-377
Cow position: chr15:44829481-44829706 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 167-377
Cow position: chr15:224978-225199 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 168-340
Cow position: chr15:10737313-10737495 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 117

Conread position: 168-380
Cow position: chr15:26421139-26421356 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 139

Conread position: 168-381
Cow position: chr15:20422301-20422519 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 142

Conread position: 1-295
Cow position: chr16:13713437-13713133 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 125, 24

Conread position: 1-314
Cow position: chr16:12087197-12086875 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 150, 63

Conread position: 1-377
Cow position: chr16:51578948-51578574 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 96

Conread position: 1-381
Cow position: chr16:31122805-31122399 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 183

Conread position: 1-381
Cow position: chr16:33704255-33704651 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 183

Conread position: 1-381
Cow position: chr16:42079388-42078992 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 43

Conread position: 1-381
Cow position: chr16:45731922-45731525 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 324

Conread position: 1-381
Cow position: chr16:48370500-48370101 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 314

Conread position: 1-383
Cow position: chr16:49768768-49768365 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 183

Conread position: 2-371
Cow position: chr16:5726383-5726763 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 150, 27

Conread position: 2-375
Cow position: chr16:42219720-42219329 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 64

Conread position: 2-375
Cow position: chr16:49169908-49169539 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 146, 81

Conread position: 2-377
Cow position: chr16:7917252-7917646 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 319

Conread position: 2-377
Cow position: chr16:17143256-17143651 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 101

Conread position: 2-379
Cow position: chr16:50712457-50712059 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 182

Conread position: 2-381
Cow position: chr16:25169843-25170240 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 182

Conread position: 2-381
Cow position: chr16:39384857-39385251 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 88

Conread position: 2-381
Cow position: chr16:43513023-43513417 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 64

Conread position: 2-381
Cow position: chr16:49142088-49141713 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 113

Conread position: 2-383
Cow position: chr16:48519907-48520309 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 127

Conread position: 2-388
Cow position: chr16:4972575-4972168 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 182

Conread position: 3-375
Cow position: chr16:29158583-29158972 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 181

Conread position: 3-383
Cow position: chr16:26500613-26501012 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 345

Conread position: 4-389
Cow position: chr16:18141872-18141474 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 379

Conread position: 8-395
Cow position: chr16:19757331-19756927 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 336

Conread position: 11-211
Cow position: chr16:29538833-29538631 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 178

Conread position: 15-361
Cow position: chr16:4699492-4699140 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 171

Conread position: 22-380
Cow position: chr16:40333851-40333476 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 283

Conread position: 25-381
Cow position: chr16:11105028-11105399 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 155

Conread position: 27-381
Cow position: chr16:4058841-4059209 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 250

Conread position: 28-303
Cow position: chr16:33235761-33235466 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 158

Conread position: 31-258
Cow position: chr16:5363355-5363578 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 175, 98

Conread position: 31-346
Cow position: chr16:27706736-27706403 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 121, 40

Conread position: 31-375
Cow position: chr16:19643376-19643737 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 89

Conread position: 37-262
Cow position: chr16:45785155-45785396 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 115, 53

Conread position: 42-382
Cow position: chr16:23475583-23475944 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 53-379
Cow position: chr16:48398742-48398402 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 132

Conread position: 59-381
Cow position: chr16:52169584-52169912 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 12, 64

Conread position: 69-383
Cow position: chr16:54578694-54579019 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 48

Conread position: 72-361
Cow position: chr16:42073440-42073130 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 80, 0

Conread position: 89-381
Cow position: chr16:56231358-56231673 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 90-377
Cow position: chr16:33102426-33102118 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 62, 94

Conread position: 91-354
Cow position: chr16:17288332-17288620 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 61, 18

Conread position: 118-380
Cow position: chr16:34210848-34210564 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 125-381
Cow position: chr16:16425032-16424754 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 60

Conread position: 149-381
Cow position: chr16:30143606-30143363 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 24

Conread position: 150-383
Cow position: chr16:31159961-31159726 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 54, 23

Conread position: 153-381
Cow position: chr16:24445872-24446110 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 158

Conread position: 162-383
Cow position: chr16:23823391-23823169 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 44, 92

Conread position: 166-346
Cow position: chr16:15188823-15189013 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 167-381
Cow position: chr16:7665252-7665481 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 168-383
Cow position: chr16:8438987-8438773 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 87, 46

Conread position: 169-383
Cow position: chr16:22717237-22717450 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 75

Conread position: 244-381
Cow position: chr16:5292681-5292821 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 1-275
Cow position: chr17:29810143-29810438 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 221
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 151, 96

Conread position: 1-377
Cow position: chr17:21874827-21874430 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 374

Conread position: 1-379
Cow position: chr17:20814860-20815263 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 277
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 204, 35

Conread position: 1-382
Cow position: chr17:21960197-21959793 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 254

Conread position: 1-383
Cow position: chr17:33289161-33288761 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 102

Conread position: 2-301
Cow position: chr17:20271859-20271546 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 150, 49

Conread position: 2-356
Cow position: chr17:6565970-6566337 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 253

Conread position: 2-377
Cow position: chr17:30984-31380 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-377
Cow position: chr17:20800307-20800702 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 374

Conread position: 2-377
Cow position: chr17:22057666-22057286 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 262
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 115, 56

Conread position: 2-381
Cow position: chr17:20780011-20780401 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 34

Conread position: 2-381
Cow position: chr17:29715696-29715299 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 38

Conread position: 2-383
Cow position: chr17:139157-139555 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 266

Conread position: 2-383
Cow position: chr17:12289927-12289522 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 52

Conread position: 2-383
Cow position: chr17:13144186-13143797 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 76

Conread position: 2-383
Cow position: chr17:28024349-28023949 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 115

Conread position: 3-275
Cow position: chr17:6848395-6848674 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 111, 231

Conread position: 4-377
Cow position: chr17:15854295-15854677 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 21

Conread position: 5-381
Cow position: chr17:27305659-27306049 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 177

Conread position: 5-381
Cow position: chr17:40405801-40406195 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 20-381
Cow position: chr17:1410730-1410352 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 47

Conread position: 42-383
Cow position: chr17:23337482-23337120 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 16

Conread position: 67-377
Cow position: chr17:13409777-13409468 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 48, 60

Conread position: 68-377
Cow position: chr17:21336139-21335811 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 45

Conread position: 71-381
Cow position: chr17:3154209-3153881 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 106

Conread position: 71-381
Cow position: chr17:21494944-21495265 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 53, 105

Conread position: 72-357
Cow position: chr17:20993481-20993172 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 80, 0

Conread position: 77-381
Cow position: chr17:27667628-27667303 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 38, 107

Conread position: 85-381
Cow position: chr17:18266636-18266961 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 67, 187

Conread position: 91-383
Cow position: chr17:29276812-29277125 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 93

Conread position: 92-379
Cow position: chr17:1025876-1026168 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 130

Conread position: 97-381
Cow position: chr17:26764599-26764904 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 91

Conread position: 108-377
Cow position: chr17:23517569-23517281 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 69

Conread position: 115-371
Cow position: chr17:15300260-15299989 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 36, 69

Conread position: 149-382
Cow position: chr17:25344291-25344048 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 24

Conread position: 150-377
Cow position: chr17:26514365-26514602 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 55, 23

Conread position: 150-380
Cow position: chr17:3371099-3371338 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 16

Conread position: 150-381
Cow position: chr17:20033262-20033025 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 25

Conread position: 153-377
Cow position: chr17:9853639-9853873 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 20

Conread position: 167-377
Cow position: chr17:15893570-15893788 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 153

Conread position: 271-381
Cow position: chr17:24587398-24587509 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 1-361
Cow position: chr18:30248700-30248330 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 165

Conread position: 1-381
Cow position: chr18:81181-81574 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 119

Conread position: 1-381
Cow position: chr18:7076187-7076582 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 2-260
Cow position: chr18:40722088-40722343 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 204, 101

Conread position: 2-360
Cow position: chr18:39002379-39001998 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 142, 98

Conread position: 2-377
Cow position: chr18:6047069-6046670 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-377
Cow position: chr18:8967422-8967812 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 183

Conread position: 2-377
Cow position: chr18:50638044-50637649 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 2-381
Cow position: chr18:47183872-47183466 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 146

Conread position: 2-382
Cow position: chr18:10574471-10574873 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 345

Conread position: 2-383
Cow position: chr18:10655875-10656265 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 3-381
Cow position: chr18:7649413-7649811 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 14

Conread position: 4-361
Cow position: chr18:23659138-23658760 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 29

Conread position: 9-381
Cow position: chr18:4315729-4316124 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 369

Conread position: 10-376
Cow position: chr18:33756316-33756691 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 242

Conread position: 19-383
Cow position: chr18:28767809-28768181 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 90

Conread position: 19-383
Cow position: chr18:40758647-40759035 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 165

Conread position: 30-381
Cow position: chr18:23631132-23630760 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 334

Conread position: 34-375
Cow position: chr18:55590023-55589665 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 79

Conread position: 34-382
Cow position: chr18:19193895-19193533 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 150

Conread position: 43-383
Cow position: chr18:30793919-30794254 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 139

Conread position: 54-291
Cow position: chr18:42480523-42480288 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 153, 59

Conread position: 60-395
Cow position: chr18:31673032-31672678 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 49, 247

Conread position: 101-334
Cow position: chr18:5190167-5189910 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 224

Conread position: 116-377
Cow position: chr18:1023330-1023601 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 18, 60

Conread position: 146-358
Cow position: chr18:30360550-30360325 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 0

Conread position: 150-381
Cow position: chr18:34621787-34621549 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 23

Conread position: 150-383
Cow position: chr18:23766843-23766597 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 22

Conread position: 153-377
Cow position: chr18:32860229-32860461 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 13

Conread position: 153-383
Cow position: chr18:26001782-26001545 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 53, 20

Conread position: 154-383
Cow position: chr18:44235779-44236020 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 51, 19

Conread position: 163-383
Cow position: chr18:21195750-21195518 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 167-357
Cow position: chr18:9010325-9010525 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 167-377
Cow position: chr18:9029219-9029432 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 59

Conread position: 167-377
Cow position: chr18:20864579-20864797 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 38, 113

Conread position: 167-383
Cow position: chr18:54656882-54657108 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 168-377
Cow position: chr18:46108785-46108566 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 195

Conread position: 168-383
Cow position: chr18:7486846-7487076 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 168-383
Cow position: chr18:36458528-36458754 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 170-383
Cow position: chr18:21751899-21752123 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 37, 142

Conread position: 1-369
Cow position: chr19:15068550-15068167 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 111

Conread position: 1-377
Cow position: chr19:56150606-56150234 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 111, 100

Conread position: 1-383
Cow position: chr19:42240851-42240450 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 61

Conread position: 2-330
Cow position: chr19:3246595-3246247 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 49

Conread position: 2-353
Cow position: chr19:19805085-19804721 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 174

Conread position: 2-377
Cow position: chr19:7190165-7189781 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 42

Conread position: 2-384
Cow position: chr19:9293697-9294111 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 2-388
Cow position: chr19:37332964-37333375 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 247

Conread position: 3-383
Cow position: chr19:39339096-39338706 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 68

Conread position: 3-383
Cow position: chr19:54006355-54006759 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 13-383
Cow position: chr19:36125050-36125425 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 9

Conread position: 16-383
Cow position: chr19:43431864-43431481 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 16

Conread position: 18-381
Cow position: chr19:20661960-20661577 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 25

Conread position: 20-390
Cow position: chr19:25168831-25168445 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 60

Conread position: 26-383
Cow position: chr19:38843081-38842714 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 219

Conread position: 27-384
Cow position: chr19:33747317-33747695 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 374

Conread position: 31-369
Cow position: chr19:34287280-34287640 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 25

Conread position: 34-288
Cow position: chr19:10212853-10213127 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 150

Conread position: 35-381
Cow position: chr19:34956224-34955858 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 62-377
Cow position: chr19:27087305-27087643 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 90, 121

Conread position: 66-373
Cow position: chr19:54984579-54984902 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 86, 76

Conread position: 69-351
Cow position: chr19:39623283-39622977 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 57, 209

Conread position: 70-381
Cow position: chr19:35018738-35018409 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 113

Conread position: 76-383
Cow position: chr19:2026618-2026947 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 93, 19

Conread position: 108-383
Cow position: chr19:46693695-46693994 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 109-383
Cow position: chr19:37647293-37646998 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 43, 13

Conread position: 116-379
Cow position: chr19:23222197-23222472 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 36, 68

Conread position: 117-381
Cow position: chr19:1294751-1295029 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 65

Conread position: 149-384
Cow position: chr19:36176337-36176587 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 24

Conread position: 150-361
Cow position: chr19:39077926-39078147 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 56, 16

Conread position: 150-377
Cow position: chr19:12233750-12233987 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 23

Conread position: 156-381
Cow position: chr19:16566763-16566993 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 17

Conread position: 162-375
Cow position: chr19:20612144-20612367 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 11

Conread position: 162-381
Cow position: chr19:4279377-4279606 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 44, 11

Conread position: 162-383
Cow position: chr19:14158554-14158785 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 11

Conread position: 162-383
Cow position: chr19:47727958-47727731 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 44, 11

Conread position: 167-377
Cow position: chr19:28794035-28793813 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 168-377
Cow position: chr19:15437724-15437944 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-361
Cow position: chr2:55876850-55877227 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 186

Conread position: 1-375
Cow position: chr2:59953402-59953012 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 123

Conread position: 1-383
Cow position: chr2:33263160-33262768 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 36

Conread position: 2-361
Cow position: chr2:34467440-34467061 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 288

Conread position: 2-375
Cow position: chr2:37742754-37743145 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 183

Conread position: 2-377
Cow position: chr2:12736625-12736235 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 31

Conread position: 2-380
Cow position: chr2:23492989-23493383 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 179

Conread position: 2-381
Cow position: chr2:27179584-27179977 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-381
Cow position: chr2:43596721-43596320 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 184

Conread position: 2-381
Cow position: chr2:43978448-43978049 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 42

Conread position: 2-381
Cow position: chr2:47783825-47784222 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-381
Cow position: chr2:55632228-55632626 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 31

Conread position: 2-381
Cow position: chr2:77468001-77467603 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 89

Conread position: 2-383
Cow position: chr2:14883725-14884137 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 2-383
Cow position: chr2:34642878-34643288 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 2-383
Cow position: chr2:43826194-43826597 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-389
Cow position: chr2:12185488-12185885 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 66

Conread position: 4-373
Cow position: chr2:16018833-16018441 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 29

Conread position: 7-279
Cow position: chr2:24470469-24470194 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 144, 105

Conread position: 10-371
Cow position: chr2:28681452-28681064 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 9

Conread position: 11-377
Cow position: chr2:21644992-21644606 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 97

Conread position: 12-384
Cow position: chr2:39662163-39662552 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 140, 50

Conread position: 26-379
Cow position: chr2:59397583-59397209 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 72

Conread position: 32-381
Cow position: chr2:42226789-42226420 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 40-379
Cow position: chr2:1434859-1435188 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 19

Conread position: 53-282
Cow position: chr2:62744792-62744544 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 96, 131

Conread position: 59-346
Cow position: chr2:30352773-30352475 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 35, 81

Conread position: 72-361
Cow position: chr2:45710562-45710867 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 80, 247

Conread position: 75-379
Cow position: chr2:5980839-5981161 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 22, 13

Conread position: 79-383
Cow position: chr2:35093129-35092836 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 127, 72

Conread position: 82-381
Cow position: chr2:6038548-6038855 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 66, 93

Conread position: 88-355
Cow position: chr2:47147253-47147536 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 96

Conread position: 97-381
Cow position: chr2:57775895-57776199 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 87

Conread position: 98-381
Cow position: chr2:39589802-39590100 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 86

Conread position: 98-381
Cow position: chr2:39596845-39597143 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 223
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 86

Conread position: 103-381
Cow position: chr2:42383956-42384253 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 49, 246

Conread position: 104-383
Cow position: chr2:58158633-58158926 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 65, 232

Conread position: 106-373
Cow position: chr2:40879644-40879931 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 197

Conread position: 112-383
Cow position: chr2:38628477-38628760 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 40, 172

Conread position: 115-382
Cow position: chr2:35180961-35181248 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 37, 264

Conread position: 120-375
Cow position: chr2:31355276-31355548 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 64

Conread position: 120-377
Cow position: chr2:41176289-41176566 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 150-371
Cow position: chr2:45259466-45259236 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 22

Conread position: 150-375
Cow position: chr2:22081291-22081526 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 56, 23

Conread position: 150-377
Cow position: chr2:24435412-24435179 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 15

Conread position: 150-377
Cow position: chr2:41528116-41528352 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 23

Conread position: 150-382
Cow position: chr2:56821789-56821546 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 151-357
Cow position: chr2:58564650-58564436 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 23

Conread position: 153-377
Cow position: chr2:30112628-30112859 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 52, 20

Conread position: 153-383
Cow position: chr2:13369272-13369515 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 153-383
Cow position: chr2:42255049-42255286 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 21

Conread position: 158-353
Cow position: chr2:33537994-33537793 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 162-371
Cow position: chr2:69776055-69776267 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 129

Conread position: 166-283
Cow position: chr2:62644084-62644208 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 167-381
Cow position: chr2:40403388-40403175 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 85, 196

Conread position: 167-383
Cow position: chr2:56771473-56771696 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 174
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 168-383
Cow position: chr2:23557946-23557722 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 198

Conread position: 170-388
Cow position: chr2:47105300-47105073 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 36, 106

Conread position: 1-381
Cow position: chr20:9419488-9419087 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 183

Conread position: 1-382
Cow position: chr20:28759399-28759787 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 261
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 205, 55

Conread position: 1-383
Cow position: chr20:20202719-20203111 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 151

Conread position: 2-361
Cow position: chr20:14756577-14756195 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 2-373
Cow position: chr20:4621843-4621454 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 249

Conread position: 2-377
Cow position: chr20:6239151-6238758 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 53

Conread position: 2-381
Cow position: chr20:18168874-18169273 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 2-383
Cow position: chr20:20983522-20983903 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 277
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 30, 114

Conread position: 2-383
Cow position: chr20:27877217-27877619 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 101

Conread position: 4-328
Cow position: chr20:5077691-5078035 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 33

Conread position: 6-383
Cow position: chr20:5181397-5181795 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 105, 183

Conread position: 11-380
Cow position: chr20:11549867-11550259 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 174

Conread position: 21-387
Cow position: chr20:7710696-7710315 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 12

Conread position: 25-381
Cow position: chr20:10235367-10235745 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 160

Conread position: 31-377
Cow position: chr20:11614522-11614154 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 77-383
Cow position: chr20:17889518-17889193 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 75, 15

Conread position: 89-382
Cow position: chr20:9340371-9340683 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 97

Conread position: 103-377
Cow position: chr20:31927864-31927569 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 104-377
Cow position: chr20:10859769-10859476 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 11

Conread position: 123-381
Cow position: chr20:28604829-28605098 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 61

Conread position: 149-381
Cow position: chr20:19313414-19313172 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 24

Conread position: 152-381
Cow position: chr20:19352107-19351875 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 54, 21

Conread position: 153-362
Cow position: chr20:6045740-6045528 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 20

Conread position: 153-377
Cow position: chr20:12442035-12441803 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 20

Conread position: 166-383
Cow position: chr20:9412163-9412387 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 144

Conread position: 1-275
Cow position: chr21:29484478-29484755 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 151

Conread position: 1-377
Cow position: chr21:32297993-32297601 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 187

Conread position: 1-381
Cow position: chr21:31691009-31691392 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 141

Conread position: 1-383
Cow position: chr21:4732701-4732301 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 33

Conread position: 1-383
Cow position: chr21:29069803-29069413 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 9

Conread position: 2-256
Cow position: chr21:35573364-35573102 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 23

Conread position: 2-282
Cow position: chr21:18601183-18601474 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 119, 20

Conread position: 2-282
Cow position: chr21:44073976-44074259 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 143, 23

Conread position: 2-355
Cow position: chr21:20262822-20262446 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 184

Conread position: 2-369
Cow position: chr21:34391452-34391069 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-374
Cow position: chr21:38900298-38900681 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 115

Conread position: 2-377
Cow position: chr21:4998969-4998577 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 18

Conread position: 2-377
Cow position: chr21:16695897-16696274 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 281
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 160, 64

Conread position: 2-377
Cow position: chr21:19766362-19766760 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 380

Conread position: 2-377
Cow position: chr21:27864006-27863610 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 2-383
Cow position: chr21:34658553-34658950 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 31

Conread position: 2-388
Cow position: chr21:36909331-36909748 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 252

Conread position: 3-381
Cow position: chr21:31435872-31436261 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 166

Conread position: 3-382
Cow position: chr21:21216626-21216226 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 181

Conread position: 8-382
Cow position: chr21:13163450-13163805 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 17

Conread position: 12-375
Cow position: chr21:13300672-13301061 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 47

Conread position: 13-381
Cow position: chr21:28259515-28259911 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 282
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 178

Conread position: 25-277
Cow position: chr21:39583943-39583675 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 127, 91

Conread position: 31-378
Cow position: chr21:24223004-24222631 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 101

Conread position: 44-381
Cow position: chr21:45263464-45263112 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 337

Conread position: 51-351
Cow position: chr21:2657158-2657472 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 59

Conread position: 52-379
Cow position: chr21:26681373-26681035 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 100, 7

Conread position: 53-357
Cow position: chr21:30849372-30849050 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 117, 89

Conread position: 65-375
Cow position: chr21:36225325-36225655 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 87, 54

Conread position: 66-377
Cow position: chr21:11195711-11196042 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 86, 309

Conread position: 72-375
Cow position: chr21:33933800-33933476 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 88, 274

Conread position: 83-378
Cow position: chr21:12338761-12339080 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 69, 167

Conread position: 85-381
Cow position: chr21:25158491-25158804 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 64, 16

Conread position: 86-383
Cow position: chr21:23900208-23899891 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 66, 17

Conread position: 97-383
Cow position: chr21:5153226-5153533 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 55, 0

Conread position: 98-381
Cow position: chr21:40244044-40244349 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 86

Conread position: 100-377
Cow position: chr21:30904989-30904695 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 198

Conread position: 105-378
Cow position: chr21:4794838-4795136 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 68

Conread position: 147-381
Cow position: chr21:13954182-13954427 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 18

Conread position: 149-381
Cow position: chr21:35899483-35899722 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 58, 24

Conread position: 149-381
Cow position: chr21:37479631-37479870 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 24

Conread position: 150-380
Cow position: chr21:24857984-24858224 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 23

Conread position: 150-383
Cow position: chr21:8985222-8985465 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 57, 23

Conread position: 150-383
Cow position: chr21:20045095-20044858 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 51, 130

Conread position: 153-339
Cow position: chr21:32574406-32574605 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 153-373
Cow position: chr21:4399476-4399705 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 20

Conread position: 153-376
Cow position: chr21:40265510-40265742 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 54, 13

Conread position: 153-389
Cow position: chr21:37942006-37941761 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 13

Conread position: 154-357
Cow position: chr21:34010711-34010501 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 91

Conread position: 167-377
Cow position: chr21:19614866-19615079 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 161

Conread position: 168-377
Cow position: chr21:31702266-31702047 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 38, 197

Conread position: 169-383
Cow position: chr21:46777282-46777059 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 187

Conread position: 1-273
Cow position: chr22:36594542-36594251 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 123, 77

Conread position: 1-379
Cow position: chr22:36583181-36582787 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 54

Conread position: 1-381
Cow position: chr22:1310276-1309885 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 79

Conread position: 1-381
Cow position: chr22:4120119-4119722 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 128

Conread position: 1-381
Cow position: chr22:19828527-19828142 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 33

Conread position: 1-382
Cow position: chr22:5041781-5042168 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 70

Conread position: 2-251
Cow position: chr22:36564160-36563893 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 107, 183

Conread position: 2-273
Cow position: chr22:34605840-34606129 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 150, 34

Conread position: 2-377
Cow position: chr22:14816970-14816582 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 107

Conread position: 2-380
Cow position: chr22:21502184-21502585 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-381
Cow position: chr22:6622799-6622399 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 113

Conread position: 2-382
Cow position: chr22:5281954-5282356 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 76

Conread position: 2-382
Cow position: chr22:33901628-33901228 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 145

Conread position: 2-383
Cow position: chr22:865060-864669 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 122

Conread position: 2-383
Cow position: chr22:22155049-22155450 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 40

Conread position: 2-383
Cow position: chr22:29553503-29553104 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-383
Cow position: chr22:37829647-37829261 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 101

Conread position: 2-389
Cow position: chr22:25659086-25658680 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 62

Conread position: 3-380
Cow position: chr22:38439704-38439312 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 181

Conread position: 4-204
Cow position: chr22:8505351-8505552 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 135, 29

Conread position: 4-382
Cow position: chr22:8481106-8481495 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 29

Conread position: 8-377
Cow position: chr22:25206518-25206127 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 61

Conread position: 11-375
Cow position: chr22:14925276-14924887 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 185

Conread position: 17-381
Cow position: chr22:7912946-7913322 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 223

Conread position: 42-381
Cow position: chr22:30689117-30689478 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 143

Conread position: 43-381
Cow position: chr22:8357102-8357461 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 141

Conread position: 53-375
Cow position: chr22:34735148-34735491 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 131

Conread position: 60-258
Cow position: chr22:2523031-2523245 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 60-381
Cow position: chr22:38949409-38949070 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 116

Conread position: 75-381
Cow position: chr22:4535799-4535480 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 79, 21

Conread position: 87-383
Cow position: chr22:41136853-41137164 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 82, 162

Conread position: 92-389
Cow position: chr22:34476463-34476148 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 58, 11

Conread position: 103-346
Cow position: chr22:16292128-16292388 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 49, 148

Conread position: 103-377
Cow position: chr22:34611018-34611310 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 238

Conread position: 106-381
Cow position: chr22:16236099-16235804 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 46, 78

Conread position: 113-377
Cow position: chr22:25764252-25763967 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 39, 71

Conread position: 123-383
Cow position: chr22:20626414-20626690 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 163

Conread position: 149-377
Cow position: chr22:22054022-22054258 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 56, 24

Conread position: 150-377
Cow position: chr22:30583096-30583333 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 23

Conread position: 150-381
Cow position: chr22:29290530-29290290 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 55, 23

Conread position: 150-381
Cow position: chr22:44717327-44717556 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 57, 25

Conread position: 151-375
Cow position: chr22:19592017-19592254 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 23

Conread position: 152-377
Cow position: chr22:4017084-4017318 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 55, 21

Conread position: 153-383
Cow position: chr22:4161999-4161764 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 53, 20

Conread position: 154-375
Cow position: chr22:41045304-41045073 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 52, 19

Conread position: 154-383
Cow position: chr22:30710015-30710241 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 19

Conread position: 154-395
Cow position: chr22:25361109-25361352 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 21

Conread position: 166-361
Cow position: chr22:12572820-12573030 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 167-373
Cow position: chr22:9734481-9734694 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 40, 118

Conread position: 167-375
Cow position: chr22:29881832-29881621 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 180

Conread position: 167-377
Cow position: chr22:15337739-15337957 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 167-380
Cow position: chr22:5090327-5090556 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 204-381
Cow position: chr22:9977483-9977666 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 1-383
Cow position: chr23:3167704-3168103 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 33

Conread position: 2-271
Cow position: chr23:5721534-5721264 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 15

Conread position: 2-301
Cow position: chr23:26798232-26797918 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 2-371
Cow position: chr23:9874139-9874513 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 39

Conread position: 2-371
Cow position: chr23:20980298-20980687 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 259

Conread position: 2-377
Cow position: chr23:4608942-4608534 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 2-383
Cow position: chr23:2791111-2790711 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-383
Cow position: chr23:13598806-13599195 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 171

Conread position: 2-383
Cow position: chr23:15529249-15529636 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 171

Conread position: 2-383
Cow position: chr23:16072680-16073085 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 184

Conread position: 4-381
Cow position: chr23:10554557-10554160 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 162

Conread position: 24-383
Cow position: chr23:1430326-1429940 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 160

Conread position: 39-379
Cow position: chr23:1131592-1131955 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 104, 146

Conread position: 41-377
Cow position: chr23:3328420-3328066 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 33, 144

Conread position: 50-381
Cow position: chr23:18655386-18655738 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 102, 134

Conread position: 66-377
Cow position: chr23:1009882-1009554 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 86, 37

Conread position: 68-277
Cow position: chr23:22936026-22936250 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 101, 199

Conread position: 69-381
Cow position: chr23:30663105-30662776 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 240
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 82, 115

Conread position: 73-383
Cow position: chr23:15057104-15056788 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 59, 112

Conread position: 75-377
Cow position: chr23:22530875-22530570 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 78, 18

Conread position: 77-382
Cow position: chr23:31353874-31354200 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 75, 270

Conread position: 78-381
Cow position: chr23:8697974-8698295 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 70, 95

Conread position: 82-389
Cow position: chr23:35926130-35926455 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 233
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 70, 181

Conread position: 109-377
Cow position: chr23:29441442-29441152 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 111-318
Cow position: chr23:34264952-34264725 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 73

Conread position: 120-383
Cow position: chr23:4579468-4579180 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 122-270
Cow position: chr23:34449795-34449634 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 147-383
Cow position: chr23:7175231-7175474 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 58, 26

Conread position: 149-381
Cow position: chr23:361302-361064 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 203

Conread position: 149-381
Cow position: chr23:14739063-14739300 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 57, 17

Conread position: 150-383
Cow position: chr23:666497-666256 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 153-369
Cow position: chr23:14839119-14838896 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 54, 160

Conread position: 153-383
Cow position: chr23:24504863-24505099 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 19

Conread position: 168-381
Cow position: chr23:25362971-25363196 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 168-383
Cow position: chr23:30622566-30622340 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 162

Conread position: 1-351
Cow position: chr24:15372543-15372917 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 272

Conread position: 1-366
Cow position: chr24:32370491-32370099 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 79

Conread position: 2-205
Cow position: chr24:14375905-14375691 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 115, 0

Conread position: 2-301
Cow position: chr24:31758543-31758235 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 64

Conread position: 2-350
Cow position: chr24:16646188-16645811 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 75, 240

Conread position: 2-357
Cow position: chr24:6449964-6450316 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 109

Conread position: 2-371
Cow position: chr24:11006639-11007031 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 262
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 149, 0

Conread position: 2-377
Cow position: chr24:15793257-15792867 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 67

Conread position: 2-377
Cow position: chr24:17365229-17364832 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 332

Conread position: 2-377
Cow position: chr24:30768144-30768533 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 262

Conread position: 2-377
Cow position: chr24:31308847-31309243 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 107

Conread position: 2-383
Cow position: chr24:11839611-11840006 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 41

Conread position: 7-377
Cow position: chr24:39977357-39976985 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 248
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 199, 109

Conread position: 8-383
Cow position: chr24:27763235-27763630 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 175

Conread position: 20-383
Cow position: chr24:27845076-27844692 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 47-381
Cow position: chr24:32205332-32204968 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 64, 144

Conread position: 66-383
Cow position: chr24:27754182-27754523 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 65, 271

Conread position: 71-377
Cow position: chr24:36174280-36173961 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 38, 182

Conread position: 73-377
Cow position: chr24:24002475-24002797 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 79, 247

Conread position: 103-375
Cow position: chr24:34564652-34564945 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 49, 39

Conread position: 150-377
Cow position: chr24:35795685-35795460 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 22

Conread position: 150-380
Cow position: chr24:211566-211806 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 23

Conread position: 150-381
Cow position: chr24:37975485-37975249 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 55, 83

Conread position: 167-351
Cow position: chr24:32419624-32419819 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 167-383
Cow position: chr24:14320055-14319827 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 174

Conread position: 168-382
Cow position: chr24:35986109-35985894 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 97

Conread position: 1-177
Cow position: chr25:34237140-34236965 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-375
Cow position: chr25:36871305-36871701 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 184

Conread position: 1-383
Cow position: chr25:34659651-34659255 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 101

Conread position: 2-291
Cow position: chr25:9595767-9596070 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 179

Conread position: 2-381
Cow position: chr25:16922342-16921946 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 49

Conread position: 2-383
Cow position: chr25:16136608-16137005 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 23

Conread position: 2-383
Cow position: chr25:18323905-18323503 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 4-381
Cow position: chr25:11956284-11956673 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 53

Conread position: 8-346
Cow position: chr25:4522362-4522006 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 69

Conread position: 12-345
Cow position: chr25:21041279-21041633 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 231

Conread position: 16-382
Cow position: chr25:11437342-11436953 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 170

Conread position: 22-375
Cow position: chr25:24572539-24572914 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 54

Conread position: 25-361
Cow position: chr25:6892054-6891691 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 127, 14

Conread position: 31-383
Cow position: chr25:14954547-14954176 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 152

Conread position: 42-301
Cow position: chr25:34000172-34000448 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 60, 242

Conread position: 50-381
Cow position: chr25:3992286-3992638 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 134

Conread position: 50-390
Cow position: chr25:26896547-26896897 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 238
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 93, 70

Conread position: 67-382
Cow position: chr25:18294802-18294466 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 85, 324

Conread position: 75-351
Cow position: chr25:14720012-14720301 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 85, 47

Conread position: 80-369
Cow position: chr25:14225275-14224960 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 69, 23

Conread position: 85-383
Cow position: chr25:35339866-35340182 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 99

Conread position: 97-381
Cow position: chr25:16738398-16738099 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 55, 87

Conread position: 103-384
Cow position: chr25:20403170-20402869 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 105-377
Cow position: chr25:41107312-41107599 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 47, 78

Conread position: 119-383
Cow position: chr25:787838-788115 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 33, 227

Conread position: 120-371
Cow position: chr25:11830329-11830056 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 32, 0

Conread position: 135-381
Cow position: chr25:26087103-26087363 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 17, 102

Conread position: 149-381
Cow position: chr25:7641842-7641606 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 24

Conread position: 150-328
Cow position: chr25:14255169-14255350 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 23

Conread position: 150-354
Cow position: chr25:17191523-17191310 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 23

Conread position: 150-377
Cow position: chr25:11294400-11294639 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 57, 23

Conread position: 150-377
Cow position: chr25:24727178-24726943 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 12

Conread position: 151-390
Cow position: chr25:24136836-24136579 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 153-357
Cow position: chr25:2414447-2414654 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 13

Conread position: 153-362
Cow position: chr25:9349648-9349428 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 153-381
Cow position: chr25:13720930-13720692 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 53, 20

Conread position: 154-383
Cow position: chr25:18240764-18241003 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 52, 19

Conread position: 167-377
Cow position: chr25:12176575-12176354 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 167-383
Cow position: chr25:13325225-13325449 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 35, 119

Conread position: 168-377
Cow position: chr25:23389648-23389440 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 104

Conread position: 1-273
Cow position: chr26:5552462-5552743 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 32

Conread position: 1-381
Cow position: chr26:7525991-7525605 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 99

Conread position: 1-382
Cow position: chr26:16584863-16585258 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 219

Conread position: 1-396
Cow position: chr26:14395769-14395353 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 2-205
Cow position: chr26:9840787-9840577 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 122, 179

Conread position: 2-326
Cow position: chr26:12965171-12964845 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 148, 73

Conread position: 2-371
Cow position: chr26:13706521-13706141 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-377
Cow position: chr26:2676549-2676154 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 2-383
Cow position: chr26:9558160-9557758 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 181

Conread position: 2-383
Cow position: chr26:26671288-26670878 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 195

Conread position: 11-377
Cow position: chr26:14173777-14174159 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 109

Conread position: 13-381
Cow position: chr26:3706282-3706667 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 74

Conread position: 38-339
Cow position: chr26:30569377-30569056 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 46-383
Cow position: chr26:6837323-6837676 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 106, 47

Conread position: 49-376
Cow position: chr26:818943-818602 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 104

Conread position: 101-383
Cow position: chr26:4084644-4084349 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 16

Conread position: 113-383
Cow position: chr26:32933310-32933601 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 39, 71

Conread position: 115-375
Cow position: chr26:6323242-6323526 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 150-373
Cow position: chr26:32776880-32776649 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 54, 23

Conread position: 150-383
Cow position: chr26:9491566-9491795 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 148, 23

Conread position: 153-363
Cow position: chr26:12155477-12155259 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 21

Conread position: 167-376
Cow position: chr26:17401405-17401622 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 210

Conread position: 1-375
Cow position: chr27:6074421-6074031 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 85

Conread position: 1-381
Cow position: chr27:17396947-17397340 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 126

Conread position: 1-383
Cow position: chr27:23595765-23595377 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 81

Conread position: 2-376
Cow position: chr27:15349300-15349692 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 31

Conread position: 2-377
Cow position: chr27:2557329-2556921 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 193

Conread position: 2-381
Cow position: chr27:24999231-24999628 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 101

Conread position: 2-382
Cow position: chr27:26785476-26785872 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 287

Conread position: 2-383
Cow position: chr27:7958334-7958729 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 14

Conread position: 2-383
Cow position: chr27:11434827-11435220 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 23

Conread position: 2-383
Cow position: chr27:12751194-12751580 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 286

Conread position: 2-383
Cow position: chr27:15643951-15644353 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-383
Cow position: chr27:28984431-28984837 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 185

Conread position: 2-384
Cow position: chr27:3989115-3988713 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 181

Conread position: 2-384
Cow position: chr27:22549284-22549677 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 23

Conread position: 3-377
Cow position: chr27:815870-815480 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 181

Conread position: 4-369
Cow position: chr27:20065858-20066243 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 40, 317

Conread position: 19-381
Cow position: chr27:23511608-23511228 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 85

Conread position: 31-377
Cow position: chr27:4673492-4673131 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 238

Conread position: 68-377
Cow position: chr27:2298853-2298522 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 84, 117

Conread position: 77-377
Cow position: chr27:13273580-13273896 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 75, 36

Conread position: 92-377
Cow position: chr27:21977722-21978028 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 5

Conread position: 113-301
Cow position: chr27:21297296-21297087 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 142-362
Cow position: chr27:22603518-22603288 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 149-381
Cow position: chr27:26427780-26428022 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 24

Conread position: 150-315
Cow position: chr27:23148181-23148355 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 23

Conread position: 150-383
Cow position: chr27:24227446-24227689 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 55, 23

Conread position: 154-375
Cow position: chr27:20641000-20641231 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 19

Conread position: 167-375
Cow position: chr27:8629543-8629759 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 168

Conread position: 167-375
Cow position: chr27:25411184-25411407 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 167-396
Cow position: chr27:26999094-26999332 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 83

Conread position: 168-376
Cow position: chr27:26397940-26398147 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 65

Conread position: 1-205
Cow position: chr28:6060323-6060117 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 108, 45

Conread position: 1-352
Cow position: chr28:30327626-30327255 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 118

Conread position: 1-377
Cow position: chr28:8371937-8372322 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 119

Conread position: 1-383
Cow position: chr28:21844412-21844813 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 112

Conread position: 1-383
Cow position: chr28:25056424-25056830 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 184

Conread position: 2-354
Cow position: chr28:10900277-10900649 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-381
Cow position: chr28:10295644-10296045 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 2-383
Cow position: chr28:5941198-5941600 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 2-383
Cow position: chr28:14234450-14234830 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 89, 21

Conread position: 2-383
Cow position: chr28:15272800-15272403 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 50

Conread position: 3-377
Cow position: chr28:9285907-9285526 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 182

Conread position: 8-382
Cow position: chr28:11452013-11451611 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 393

Conread position: 26-383
Cow position: chr28:16925741-16925353 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 7

Conread position: 46-377
Cow position: chr28:19515876-19515540 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 57

Conread position: 50-392
Cow position: chr28:11427031-11426682 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 53

Conread position: 53-381
Cow position: chr28:23254280-23253945 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 131

Conread position: 54-381
Cow position: chr28:11585699-11585353 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 61-381
Cow position: chr28:3256318-3256649 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 68

Conread position: 104-377
Cow position: chr28:4058286-4058576 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 149-345
Cow position: chr28:5904349-5904555 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 149-362
Cow position: chr28:33031845-33032068 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 82

Conread position: 149-381
Cow position: chr28:14997678-14997917 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 56, 24

Conread position: 149-383
Cow position: chr28:3479879-3480127 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 24

Conread position: 150-343
Cow position: chr28:22329930-22330128 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 23

Conread position: 150-377
Cow position: chr28:24606197-24605963 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 190

Conread position: 166-381
Cow position: chr28:22332180-22332399 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 119

Conread position: 167-388
Cow position: chr28:12946576-12946800 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 73

Conread position: 173-371
Cow position: chr28:10616313-10616106 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 1-325
Cow position: chr29:10819223-10818876 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 158

Conread position: 1-383
Cow position: chr29:10820034-10819634 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 183

Conread position: 1-384
Cow position: chr29:4875457-4875049 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 184

Conread position: 1-386
Cow position: chr29:25423285-25423678 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 150

Conread position: 2-205
Cow position: chr29:16195290-16195490 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 85

Conread position: 2-361
Cow position: chr29:34746205-34745825 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 182

Conread position: 2-379
Cow position: chr29:28506532-28506928 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 193

Conread position: 2-381
Cow position: chr29:19761721-19762121 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 185

Conread position: 2-383
Cow position: chr29:686742-686341 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-383
Cow position: chr29:9638856-9638461 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 40

Conread position: 2-383
Cow position: chr29:26161148-26160748 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 4-381
Cow position: chr29:9332596-9332994 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 99

Conread position: 13-225
Cow position: chr29:13611196-13610976 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 169

Conread position: 20-271
Cow position: chr29:23348754-23348489 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 132, 77

Conread position: 27-383
Cow position: chr29:26130268-26130636 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 233

Conread position: 34-286
Cow position: chr29:34774382-34774110 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 117, 150

Conread position: 40-381
Cow position: chr29:21665462-21665815 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 144

Conread position: 41-377
Cow position: chr29:45650841-45650499 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 134

Conread position: 43-377
Cow position: chr29:732124-732462 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 46

Conread position: 44-383
Cow position: chr29:28696670-28696318 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 141

Conread position: 54-376
Cow position: chr29:34551953-34552295 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 98, 326

Conread position: 150-382
Cow position: chr29:35502038-35501799 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 55, 0

Conread position: 153-371
Cow position: chr29:21197039-21196812 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 53, 20

Conread position: 163-379
Cow position: chr29:43328258-43328485 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 167-377
Cow position: chr29:14888745-14888965 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 166

Conread position: 167-377
Cow position: chr29:19398807-19399028 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 163

Conread position: 1-341
Cow position: chr3:58971329-58971674 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 151, 101

Conread position: 1-351
Cow position: chr3:8557352-8556984 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 46

Conread position: 1-375
Cow position: chr3:35884527-35884134 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 176

Conread position: 1-377
Cow position: chr3:11333884-11333495 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 274

Conread position: 1-380
Cow position: chr3:50768100-50768504 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 183

Conread position: 1-381
Cow position: chr3:3884601-3884200 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 184

Conread position: 2-268
Cow position: chr3:77004917-77005192 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 120, 125

Conread position: 2-275
Cow position: chr3:64683225-64682946 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 124, 32

Conread position: 2-277
Cow position: chr3:69779730-69779439 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 139, 101

Conread position: 2-317
Cow position: chr3:68155907-68156240 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 2-339
Cow position: chr3:49132825-49132470 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 150, 23

Conread position: 2-356
Cow position: chr3:15052500-15052143 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 212

Conread position: 2-357
Cow position: chr3:66610413-66610035 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 2-361
Cow position: chr3:16752792-16752446 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 204, 108

Conread position: 2-371
Cow position: chr3:56976559-56976175 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 101

Conread position: 2-376
Cow position: chr3:61678129-61678513 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 56

Conread position: 2-377
Cow position: chr3:6264933-6265330 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-377
Cow position: chr3:31224881-31225272 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 236

Conread position: 2-377
Cow position: chr3:48567234-48566844 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 49

Conread position: 2-377
Cow position: chr3:77187877-77188261 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 181

Conread position: 2-380
Cow position: chr3:16157112-16157506 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-381
Cow position: chr3:18887005-18887408 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 2-381
Cow position: chr3:46900623-46901019 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 174

Conread position: 2-383
Cow position: chr3:65236444-65236848 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 62

Conread position: 2-390
Cow position: chr3:76000365-75999954 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 17

Conread position: 8-372
Cow position: chr3:22089847-22089465 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 105

Conread position: 11-381
Cow position: chr3:6689432-6689821 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 102

Conread position: 11-381
Cow position: chr3:61278351-61278733 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 273

Conread position: 11-384
Cow position: chr3:24853138-24852757 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 35

Conread position: 25-377
Cow position: chr3:62321691-62321315 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 112, 78

Conread position: 25-383
Cow position: chr3:3165043-3164667 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 160

Conread position: 41-381
Cow position: chr3:62611379-62611738 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 45

Conread position: 62-377
Cow position: chr3:72776724-72777064 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 88, 0

Conread position: 64-373
Cow position: chr3:17331257-17331587 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 119

Conread position: 69-381
Cow position: chr3:67161442-67161763 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 85

Conread position: 85-375
Cow position: chr3:15161555-15161258 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 73, 91

Conread position: 103-357
Cow position: chr3:50069316-50069582 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 73

Conread position: 103-375
Cow position: chr3:42177685-42177979 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 39

Conread position: 119-373
Cow position: chr3:9676794-9676528 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 55

Conread position: 146-356
Cow position: chr3:9116493-9116708 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 61, 6

Conread position: 149-357
Cow position: chr3:12671110-12670887 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 24

Conread position: 149-369
Cow position: chr3:8148078-8147850 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 58, 160

Conread position: 149-381
Cow position: chr3:21341378-21341139 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 56, 24

Conread position: 150-361
Cow position: chr3:49792999-49793216 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 23

Conread position: 153-340
Cow position: chr3:77565069-77565266 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 20

Conread position: 153-381
Cow position: chr3:14717403-14717633 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 54, 20

Conread position: 166-339
Cow position: chr3:68586642-68586823 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 166-383
Cow position: chr3:55010551-55010327 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 171

Conread position: 166-383
Cow position: chr3:68302929-68303157 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 167-376
Cow position: chr3:29891808-29891596 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 88, 173

Conread position: 168-383
Cow position: chr3:39328015-39328229 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 144

Conread position: 202-381
Cow position: chr3:65019973-65020161 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 1-265
Cow position: chr4:4127079-4127354 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 151, 103

Conread position: 1-281
Cow position: chr4:33613197-33612908 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 151

Conread position: 1-380
Cow position: chr4:16602611-16602215 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 79

Conread position: 1-381
Cow position: chr4:34223334-34223731 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 319

Conread position: 1-381
Cow position: chr4:63459745-63459373 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 126

Conread position: 1-382
Cow position: chr4:66173347-66172958 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 102

Conread position: 1-383
Cow position: chr4:34172127-34171725 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 365

Conread position: 2-361
Cow position: chr4:6653190-6653555 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 182

Conread position: 2-361
Cow position: chr4:14353240-14352858 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 338

Conread position: 2-371
Cow position: chr4:22237030-22236640 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 60

Conread position: 2-375
Cow position: chr4:9519740-9520132 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 113

Conread position: 2-375
Cow position: chr4:30690190-30690561 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 57

Conread position: 2-377
Cow position: chr4:2263310-2262915 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 101

Conread position: 2-377
Cow position: chr4:11872466-11872073 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 23

Conread position: 2-377
Cow position: chr4:29035362-29035753 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 64

Conread position: 2-381
Cow position: chr4:23655438-23655838 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 181

Conread position: 2-381
Cow position: chr4:44450141-44449744 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 42

Conread position: 2-381
Cow position: chr4:48152927-48152525 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 96

Conread position: 2-381
Cow position: chr4:49408923-49409308 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 65

Conread position: 2-381
Cow position: chr4:55271313-55270918 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 129

Conread position: 2-382
Cow position: chr4:28613260-28613665 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 186

Conread position: 2-383
Cow position: chr4:12018005-12018402 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 42

Conread position: 2-383
Cow position: chr4:50193937-50194335 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 122

Conread position: 3-377
Cow position: chr4:14230182-14229782 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 3-377
Cow position: chr4:39009410-39009804 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 22

Conread position: 4-287
Cow position: chr4:213327-213614 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 101, 58

Conread position: 8-383
Cow position: chr4:27755862-27755456 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 132, 181

Conread position: 11-381
Cow position: chr4:65826416-65826012 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 176

Conread position: 12-369
Cow position: chr4:385181-385548 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 194, 248

Conread position: 25-379
Cow position: chr4:1356041-1355675 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 34

Conread position: 25-383
Cow position: chr4:46668050-46668415 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 63

Conread position: 34-377
Cow position: chr4:38067365-38067722 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 69

Conread position: 50-381
Cow position: chr4:61898042-61897697 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 135

Conread position: 56-377
Cow position: chr4:47047238-47047583 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 128

Conread position: 61-375
Cow position: chr4:19584199-19584541 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 54, 130

Conread position: 62-381
Cow position: chr4:19096800-19097130 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 315

Conread position: 68-377
Cow position: chr4:43147911-43148242 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 84, 232

Conread position: 69-381
Cow position: chr4:560915-561244 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 80-362
Cow position: chr4:7501407-7501704 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 104

Conread position: 86-375
Cow position: chr4:56852426-56852734 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 99

Conread position: 87-383
Cow position: chr4:9445161-9444846 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 28, 16

Conread position: 89-381
Cow position: chr4:27997213-27997526 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 280

Conread position: 103-377
Cow position: chr4:351772-352067 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 81

Conread position: 103-381
Cow position: chr4:22138688-22138393 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 103-381
Cow position: chr4:56409726-56410024 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 74

Conread position: 149-383
Cow position: chr4:24458498-24458254 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 24

Conread position: 150-326
Cow position: chr4:1491257-1491074 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 23

Conread position: 150-371
Cow position: chr4:53134224-53134445 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 24

Conread position: 150-381
Cow position: chr4:10731821-10732061 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 150-381
Cow position: chr4:62772335-62772091 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 23

Conread position: 152-373
Cow position: chr4:21257522-21257296 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 54, 21

Conread position: 152-383
Cow position: chr4:46274797-46275038 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 22

Conread position: 153-361
Cow position: chr4:40576301-40576094 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 13

Conread position: 153-384
Cow position: chr4:19306861-19307101 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 53, 13

Conread position: 166-377
Cow position: chr4:22073051-22072834 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 39, 78

Conread position: 166-383
Cow position: chr4:43866229-43866008 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 39, 91

Conread position: 167-375
Cow position: chr4:38467233-38467451 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 167-377
Cow position: chr4:21058772-21058547 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 167-381
Cow position: chr4:36840898-36841122 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 40, 0

Conread position: 168-383
Cow position: chr4:19237862-19238084 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 176-377
Cow position: chr4:52979736-52979532 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 1-377
Cow position: chr5:6044761-6045159 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 1-377
Cow position: chr5:35826076-35826462 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 65

Conread position: 1-381
Cow position: chr5:15363369-15363766 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 119

Conread position: 1-381
Cow position: chr5:15598762-15598358 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 187

Conread position: 1-381
Cow position: chr5:19470702-19470311 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 177

Conread position: 1-381
Cow position: chr5:30302373-30302771 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 183

Conread position: 2-298
Cow position: chr5:56820739-56821045 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 9

Conread position: 2-337
Cow position: chr5:27179135-27179486 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 182

Conread position: 2-362
Cow position: chr5:34192422-34192802 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 297

Conread position: 2-369
Cow position: chr5:24348600-24348975 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 99

Conread position: 2-370
Cow position: chr5:12315797-12316179 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 97

Conread position: 2-375
Cow position: chr5:54868894-54869285 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 73

Conread position: 2-377
Cow position: chr5:31097326-31096932 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 179

Conread position: 2-381
Cow position: chr5:21943852-21944258 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 2-381
Cow position: chr5:47889224-47888839 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 77

Conread position: 2-381
Cow position: chr5:54405419-54405020 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 289

Conread position: 2-381
Cow position: chr5:59877262-59876863 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 350

Conread position: 2-383
Cow position: chr5:3204330-3204711 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 150, 65

Conread position: 2-383
Cow position: chr5:5937800-5938202 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 150

Conread position: 2-383
Cow position: chr5:7192921-7193309 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 60

Conread position: 2-383
Cow position: chr5:41523309-41522918 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 87

Conread position: 2-383
Cow position: chr5:49522202-49522606 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 184

Conread position: 2-383
Cow position: chr5:54714266-54713859 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 3-383
Cow position: chr5:54337401-54337801 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 47

Conread position: 3-383
Cow position: chr5:70593501-70593101 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 114

Conread position: 5-383
Cow position: chr5:29770996-29771392 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 112

Conread position: 5-383
Cow position: chr5:39448055-39447653 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 179

Conread position: 11-384
Cow position: chr5:27154511-27154898 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 9

Conread position: 14-381
Cow position: chr5:26378178-26377795 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 11

Conread position: 16-377
Cow position: chr5:47871556-47871179 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 275

Conread position: 16-381
Cow position: chr5:66816090-66815701 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 117

Conread position: 19-383
Cow position: chr5:41469315-41469687 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 187, 39

Conread position: 25-351
Cow position: chr5:66971898-66972248 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 97, 162

Conread position: 36-383
Cow position: chr5:41546381-41546015 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 149

Conread position: 44-375
Cow position: chr5:65593391-65593749 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 108, 137

Conread position: 67-381
Cow position: chr5:47601349-47601691 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 113

Conread position: 73-257
Cow position: chr5:16062263-16062067 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 67, 94

Conread position: 76-341
Cow position: chr5:32809453-32809165 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 108

Conread position: 103-381
Cow position: chr5:12672448-12672156 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 189

Conread position: 149-349
Cow position: chr5:22565272-22565487 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 24

Conread position: 150-371
Cow position: chr5:4388988-4389218 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 23

Conread position: 150-373
Cow position: chr5:22737740-22737972 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 23

Conread position: 150-383
Cow position: chr5:47317333-47317090 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 23

Conread position: 151-377
Cow position: chr5:17027734-17027966 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 23

Conread position: 151-381
Cow position: chr5:61030594-61030353 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 153-333
Cow position: chr5:7921744-7921551 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 53, 20

Conread position: 153-382
Cow position: chr5:66338724-66338959 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 54, 20

Conread position: 162-377
Cow position: chr5:46653552-46653773 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 44, 11

Conread position: 162-383
Cow position: chr5:55428203-55428433 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 44, 11

Conread position: 167-375
Cow position: chr5:13691924-13691705 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 69

Conread position: 167-377
Cow position: chr5:23397538-23397751 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 111

Conread position: 168-377
Cow position: chr5:12718906-12719125 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 161

Conread position: 168-377
Cow position: chr5:41531438-41531216 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 1-372
Cow position: chr6:56842661-56843040 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 81

Conread position: 1-375
Cow position: chr6:8210092-8209705 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 179

Conread position: 1-375
Cow position: chr6:49411187-49410804 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 107

Conread position: 1-381
Cow position: chr6:2607103-2607502 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 397

Conread position: 1-383
Cow position: chr6:37644056-37644462 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 273
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 148, 276

Conread position: 2-268
Cow position: chr6:65930860-65931147 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 100, 0

Conread position: 2-275
Cow position: chr6:47171685-47171974 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 180

Conread position: 2-282
Cow position: chr6:34030893-34031173 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 92, 63

Conread position: 2-373
Cow position: chr6:22507243-22507628 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 266
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 119, 40

Conread position: 2-375
Cow position: chr6:31548938-31548545 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 31

Conread position: 2-377
Cow position: chr6:12622961-12623354 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-377
Cow position: chr6:46391185-46391574 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 378

Conread position: 2-377
Cow position: chr6:53345287-53345682 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 111

Conread position: 2-377
Cow position: chr6:54648035-54647640 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-377
Cow position: chr6:61632106-61631727 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 2-377
Cow position: chr6:68829933-68830329 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 311

Conread position: 2-381
Cow position: chr6:14696881-14696482 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 23

Conread position: 2-382
Cow position: chr6:17414957-17414561 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 60

Conread position: 2-383
Cow position: chr6:181902-181501 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 184

Conread position: 2-383
Cow position: chr6:16765901-16765503 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 72

Conread position: 2-383
Cow position: chr6:43789728-43789333 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 86

Conread position: 3-383
Cow position: chr6:33509077-33509473 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 36

Conread position: 8-357
Cow position: chr6:34075522-34075885 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 293

Conread position: 14-381
Cow position: chr6:14839523-14839140 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 315

Conread position: 14-383
Cow position: chr6:57473897-57474271 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 140

Conread position: 19-381
Cow position: chr6:58073544-58073934 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 366

Conread position: 52-381
Cow position: chr6:51071262-51071598 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 72, 86

Conread position: 54-381
Cow position: chr6:10605226-10605575 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 98, 0

Conread position: 60-383
Cow position: chr6:58747758-58748102 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 5, 125

Conread position: 66-377
Cow position: chr6:66566011-66566341 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 86, 56

Conread position: 72-350
Cow position: chr6:20245644-20245943 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 80, 112

Conread position: 86-361
Cow position: chr6:46205594-46205888 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 66, 15

Conread position: 104-383
Cow position: chr6:58031714-58032012 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 81

Conread position: 113-361
Cow position: chr6:24652579-24652312 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 71

Conread position: 116-371
Cow position: chr6:33302015-33302292 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 36, 135

Conread position: 141-375
Cow position: chr6:55610597-55610355 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 145

Conread position: 142-375
Cow position: chr6:1944372-1944610 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 64, 9

Conread position: 150-353
Cow position: chr6:22921036-22921249 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 23

Conread position: 150-377
Cow position: chr6:6060908-6060671 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 23

Conread position: 150-382
Cow position: chr6:14958693-14958458 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 23

Conread position: 150-382
Cow position: chr6:68252433-68252675 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 55, 12

Conread position: 151-381
Cow position: chr6:19427099-19427339 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 153-380
Cow position: chr6:32854607-32854381 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 20

Conread position: 153-382
Cow position: chr6:24327483-24327246 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 54, 20

Conread position: 167-381
Cow position: chr6:54867184-54867402 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 44

Conread position: 168-375
Cow position: chr6:48468468-48468687 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 38, 204

Conread position: 168-377
Cow position: chr6:12927789-12928006 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 91

Conread position: 1-205
Cow position: chr7:48714032-48714229 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 127, 0

Conread position: 1-340
Cow position: chr7:11783930-11783568 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 22

Conread position: 1-340
Cow position: chr7:53772815-53772464 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 53

Conread position: 1-368
Cow position: chr7:33697455-33697853 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 280

Conread position: 1-373
Cow position: chr7:23276781-23276388 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 36

Conread position: 1-377
Cow position: chr7:17590959-17591361 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 274
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 7, 340

Conread position: 1-381
Cow position: chr7:4452093-4452492 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 1-381
Cow position: chr7:24990775-24991168 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 43

Conread position: 1-381
Cow position: chr7:35111064-35111464 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 185

Conread position: 1-383
Cow position: chr7:27762471-27762857 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 9

Conread position: 2-357
Cow position: chr7:59688025-59688409 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 123, 186

Conread position: 2-367
Cow position: chr7:4130299-4129912 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 264
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 65

Conread position: 2-371
Cow position: chr7:21326550-21326920 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 129

Conread position: 2-371
Cow position: chr7:44597205-44596813 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 150, 35

Conread position: 2-376
Cow position: chr7:62193063-62193450 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 15

Conread position: 2-377
Cow position: chr7:22357996-22357601 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 293

Conread position: 2-377
Cow position: chr7:38081660-38082040 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 35

Conread position: 2-379
Cow position: chr7:18872708-18873099 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 101

Conread position: 2-379
Cow position: chr7:35778945-35779338 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 73

Conread position: 2-381
Cow position: chr7:24764387-24763989 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 115

Conread position: 2-381
Cow position: chr7:26011905-26012316 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 256

Conread position: 2-383
Cow position: chr7:13928644-13928260 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 101

Conread position: 2-383
Cow position: chr7:23646094-23646497 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 188

Conread position: 2-383
Cow position: chr7:25723184-25722774 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 289
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 100, 169

Conread position: 2-383
Cow position: chr7:35652584-35652186 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 181

Conread position: 2-383
Cow position: chr7:41771434-41771041 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 64

Conread position: 2-383
Cow position: chr7:50076231-50075832 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 54

Conread position: 2-383
Cow position: chr7:67803464-67803859 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 334

Conread position: 2-388
Cow position: chr7:49608129-49608535 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 183

Conread position: 4-381
Cow position: chr7:25414892-25415287 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 181

Conread position: 4-383
Cow position: chr7:36737642-36738025 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 29

Conread position: 8-373
Cow position: chr7:23465237-23464869 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 103

Conread position: 18-361
Cow position: chr7:19982311-19981969 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 18

Conread position: 20-383
Cow position: chr7:44544557-44544174 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 274
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 131, 19

Conread position: 25-381
Cow position: chr7:20534391-20534765 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 299

Conread position: 30-383
Cow position: chr7:9146158-9146537 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 162

Conread position: 31-312
Cow position: chr7:55085511-55085212 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 153

Conread position: 31-377
Cow position: chr7:17816282-17816642 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 152

Conread position: 32-355
Cow position: chr7:10760337-10759993 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 152

Conread position: 32-383
Cow position: chr7:26632290-26631917 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 154

Conread position: 40-383
Cow position: chr7:25512591-25512226 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 147

Conread position: 41-383
Cow position: chr7:10122252-10122604 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 111, 48

Conread position: 53-381
Cow position: chr7:6057672-6058023 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 58-383
Cow position: chr7:61818387-61818048 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 263

Conread position: 72-390
Cow position: chr7:18388834-18388495 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 75-383
Cow position: chr7:49942847-49942532 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 77, 182

Conread position: 76-381
Cow position: chr7:39042165-39042493 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 60, 225

Conread position: 92-383
Cow position: chr7:54712003-54712309 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 216

Conread position: 94-377
Cow position: chr7:24237243-24237536 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 58, 23

Conread position: 101-381
Cow position: chr7:32711389-32711088 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 8, 0

Conread position: 101-383
Cow position: chr7:9193651-9193350 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 14, 278

Conread position: 103-377
Cow position: chr7:54089796-54090091 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 58, 225

Conread position: 108-383
Cow position: chr7:36664928-36665226 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 21

Conread position: 112-382
Cow position: chr7:44039097-44039383 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 265

Conread position: 117-380
Cow position: chr7:24797082-24796801 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 138

Conread position: 138-308
Cow position: chr7:28336817-28336997 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 35

Conread position: 149-381
Cow position: chr7:27079290-27079521 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 24

Conread position: 150-357
Cow position: chr7:34979020-34979253 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 23

Conread position: 150-381
Cow position: chr7:60869384-60869622 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 23

Conread position: 153-343
Cow position: chr7:57021767-57021568 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 53, 13

Conread position: 153-377
Cow position: chr7:58170394-58170629 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 153-384
Cow position: chr7:61128873-61129113 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 20

Conread position: 162-334
Cow position: chr7:20332776-20332956 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 11

Conread position: 166-378
Cow position: chr7:27509384-27509606 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 40, 0

Conread position: 167-381
Cow position: chr7:51407778-51407994 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 140

Conread position: 167-383
Cow position: chr7:9661368-9661152 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 91

Conread position: 167-383
Cow position: chr7:30769041-30768822 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 145

Conread position: 168-343
Cow position: chr7:60756853-60756671 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 112

Conread position: 168-352
Cow position: chr7:8735547-8735725 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 138

Conread position: 168-377
Cow position: chr7:28324319-28324523 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 46

Conread position: 168-377
Cow position: chr7:52664269-52664057 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 105

Conread position: 168-383
Cow position: chr7:41299754-41299538 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 38, 192

Conread position: 169-376
Cow position: chr7:31204853-31204642 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 191

Conread position: 218-383
Cow position: chr7:57244362-57244195 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 1-361
Cow position: chr8:16938990-16938608 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 183

Conread position: 1-377
Cow position: chr8:19996262-19995874 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 281

Conread position: 1-377
Cow position: chr8:48099684-48099288 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 183

Conread position: 1-381
Cow position: chr8:833836-834227 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 10

Conread position: 1-381
Cow position: chr8:19998623-19998223 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 182

Conread position: 1-381
Cow position: chr8:54051774-54052166 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 95

Conread position: 1-383
Cow position: chr8:18057196-18057600 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 150

Conread position: 1-383
Cow position: chr8:33814401-33814806 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 184

Conread position: 1-383
Cow position: chr8:33993629-33994025 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 302

Conread position: 2-205
Cow position: chr8:26386836-26386625 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 107, 0

Conread position: 2-258
Cow position: chr8:42009875-42010140 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 125, 15

Conread position: 2-355
Cow position: chr8:1115329-1114957 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 117

Conread position: 2-361
Cow position: chr8:3446614-3446243 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 171

Conread position: 2-363
Cow position: chr8:17489101-17488733 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 49

Conread position: 2-371
Cow position: chr8:16195034-16195418 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 176

Conread position: 2-371
Cow position: chr8:36560600-36560220 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 264
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 155, 87

Conread position: 2-375
Cow position: chr8:27152517-27152130 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 45

Conread position: 2-377
Cow position: chr8:26607394-26607791 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 337

Conread position: 2-377
Cow position: chr8:33437147-33437499 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 201, 76

Conread position: 2-377
Cow position: chr8:47752455-47752062 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 101

Conread position: 2-377
Cow position: chr8:55122991-55122597 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-381
Cow position: chr8:13374004-13374404 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-381
Cow position: chr8:15569972-15569600 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 88

Conread position: 2-381
Cow position: chr8:19600933-19601343 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 112, 194

Conread position: 2-381
Cow position: chr8:35211702-35211294 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 339

Conread position: 2-383
Cow position: chr8:2166316-2165914 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-383
Cow position: chr8:51602969-51602573 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 278
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 150, 34

Conread position: 2-384
Cow position: chr8:40888735-40888335 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 185

Conread position: 5-361
Cow position: chr8:45878514-45878885 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 31

Conread position: 5-361
Cow position: chr8:45925095-45925467 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 114

Conread position: 8-383
Cow position: chr8:59277766-59277370 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 96

Conread position: 11-349
Cow position: chr8:43439059-43439415 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 336

Conread position: 11-355
Cow position: chr8:35924216-35923886 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 141, 201

Conread position: 11-381
Cow position: chr8:24372240-24371859 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 173

Conread position: 13-381
Cow position: chr8:36648976-36648600 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 299

Conread position: 19-343
Cow position: chr8:9985073-9985417 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 94, 67

Conread position: 28-374
Cow position: chr8:60989126-60989499 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 269
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 58, 178

Conread position: 31-205
Cow position: chr8:42890067-42889896 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 38-376
Cow position: chr8:23677295-23677633 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 77, 136

Conread position: 39-383
Cow position: chr8:41263817-41264169 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 69, 248

Conread position: 54-377
Cow position: chr8:53430753-53431100 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 44, 302

Conread position: 59-334
Cow position: chr8:49287981-49287690 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 82, 0

Conread position: 73-373
Cow position: chr8:26650838-26651156 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 77, 113

Conread position: 74-383
Cow position: chr8:39065757-39066075 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 57, 65

Conread position: 75-377
Cow position: chr8:31958170-31958484 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 77, 13

Conread position: 82-381
Cow position: chr8:36375959-36375652 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 27, 140

Conread position: 94-342
Cow position: chr8:29947982-29947725 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 58, 19

Conread position: 103-383
Cow position: chr8:25082047-25082343 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 49, 14

Conread position: 105-377
Cow position: chr8:48211628-48211335 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 275

Conread position: 111-377
Cow position: chr8:5449287-5449020 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 103, 41

Conread position: 115-383
Cow position: chr8:45245439-45245156 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 37, 69

Conread position: 150-375
Cow position: chr8:53429397-53429627 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 23

Conread position: 150-381
Cow position: chr8:10399933-10400168 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 23

Conread position: 151-381
Cow position: chr8:2580039-2579797 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 53, 228

Conread position: 151-381
Cow position: chr8:23179922-23179687 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 55, 22

Conread position: 152-383
Cow position: chr8:35436992-35436752 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 21

Conread position: 153-370
Cow position: chr8:8134890-8134658 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 20

Conread position: 153-371
Cow position: chr8:39808187-39808410 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 54, 20

Conread position: 153-383
Cow position: chr8:39144393-39144626 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 52, 13

Conread position: 154-377
Cow position: chr8:16972906-16972675 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 52, 19

Conread position: 163-381
Cow position: chr8:27955801-27955580 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 92

Conread position: 166-355
Cow position: chr8:46615757-46615954 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 167-377
Cow position: chr8:36679391-36679170 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 168-377
Cow position: chr8:3150069-3149846 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 190

Conread position: 168-383
Cow position: chr8:6233261-6233035 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 214-381
Cow position: chr8:10176459-10176284 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 1-251
Cow position: chr9:9405448-9405703 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 150, 161

Conread position: 1-282
Cow position: chr9:51621288-51620980 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 43

Conread position: 1-373
Cow position: chr9:31115250-31115637 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 326

Conread position: 1-377
Cow position: chr9:1520149-1520547 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 183

Conread position: 1-377
Cow position: chr9:8154755-8154362 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 127

Conread position: 1-377
Cow position: chr9:20942045-20942423 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 151, 81

Conread position: 1-382
Cow position: chr9:1855855-1855458 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 72

Conread position: 1-382
Cow position: chr9:28726150-28726545 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 35

Conread position: 2-271
Cow position: chr9:25959034-25958747 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 160, 142

Conread position: 2-298
Cow position: chr9:34901042-34901342 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 149, 71

Conread position: 2-306
Cow position: chr9:13472023-13471703 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 177

Conread position: 2-346
Cow position: chr9:24873406-24873063 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 74

Conread position: 2-362
Cow position: chr9:13186148-13186528 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 254

Conread position: 2-369
Cow position: chr9:21459583-21459967 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 182

Conread position: 2-377
Cow position: chr9:18381435-18381042 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 270
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 112, 60

Conread position: 2-379
Cow position: chr9:34696717-34697114 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 2-381
Cow position: chr9:20407208-20406817 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 49

Conread position: 2-383
Cow position: chr9:9491364-9490972 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 31

Conread position: 2-383
Cow position: chr9:18139727-18140117 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 150

Conread position: 2-383
Cow position: chr9:22656367-22656769 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-383
Cow position: chr9:29184559-29184956 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 122

Conread position: 2-383
Cow position: chr9:37017463-37017061 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 183

Conread position: 2-383
Cow position: chr9:40326971-40327372 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 287

Conread position: 2-383
Cow position: chr9:59171815-59172199 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 267
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 83, 129

Conread position: 3-377
Cow position: chr9:22617195-22616806 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 20

Conread position: 3-383
Cow position: chr9:30401840-30402241 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 272
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 71, 27

Conread position: 8-258
Cow position: chr9:7159266-7159528 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 70, 28

Conread position: 8-360
Cow position: chr9:10634457-10634818 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 157

Conread position: 8-381
Cow position: chr9:53607821-53608212 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 176

Conread position: 11-383
Cow position: chr9:6952659-6952267 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 216

Conread position: 21-381
Cow position: chr9:54413043-54412662 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 131, 163

Conread position: 25-381
Cow position: chr9:45284987-45285348 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 29-361
Cow position: chr9:55074586-55074936 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 27

Conread position: 32-381
Cow position: chr9:47499651-47500024 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 71

Conread position: 34-357
Cow position: chr9:53110067-53109729 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 38

Conread position: 34-381
Cow position: chr9:28746979-28747342 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 79

Conread position: 42-379
Cow position: chr9:49544520-49544879 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 310

Conread position: 54-377
Cow position: chr9:8998083-8997739 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 98, 0

Conread position: 62-372
Cow position: chr9:3411287-3410957 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 90, 122

Conread position: 71-373
Cow position: chr9:36490418-36490708 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 227, 102

Conread position: 72-334
Cow position: chr9:35357420-35357692 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 80, 243

Conread position: 105-377
Cow position: chr9:8937625-8937331 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 107-381
Cow position: chr9:54528987-54528694 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 58, 6

Conread position: 111-281
Cow position: chr9:9640661-9640842 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 146-381
Cow position: chr9:34355509-34355746 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 27

Conread position: 149-377
Cow position: chr9:23430728-23430959 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 24

Conread position: 150-371
Cow position: chr9:11299281-11299508 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 23

Conread position: 150-377
Cow position: chr9:10966360-10966126 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 52, 12

Conread position: 150-381
Cow position: chr9:20848357-20848114 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 23

Conread position: 150-381
Cow position: chr9:58647463-58647220 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 23

Conread position: 150-383
Cow position: chr9:58451687-58451920 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 55, 23

Conread position: 153-381
Cow position: chr9:62400372-62400133 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 9

Conread position: 167-377
Cow position: chr9:33823495-33823281 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 155

Conread position: 167-377
Cow position: chr9:64055457-64055676 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 202

Conread position: 167-383
Cow position: chr9:8637060-8636829 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 66

Conread position: 167-383
Cow position: chr9:34737814-34738039 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 189

Conread position: 169-361
Cow position: chr9:28740077-28739869 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 170-375
Cow position: chr9:5345641-5345432 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 44

Conread position: 170-379
Cow position: chr9:7363436-7363208 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 214-381
Cow position: chr9:54177895-54178070 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 1-282
Cow position: chrX:4750896-4750602 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 112

Conread position: 1-310
Cow position: chrX:38852635-38852962 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 182

Conread position: 1-313
Cow position: chrX:10256666-10256335 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 183

Conread position: 1-361
Cow position: chrX:45967648-45968020 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 151, 67

Conread position: 1-371
Cow position: chrX:20801249-20801645 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 267
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 111, 63

Conread position: 1-375
Cow position: chrX:16078144-16078537 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 265
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 36, 122

Conread position: 1-377
Cow position: chrX:13177989-13177592 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 59

Conread position: 1-381
Cow position: chrX:6543733-6544129 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 119

Conread position: 1-383
Cow position: chrX:45413173-45412776 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 119

Conread position: 2-274
Cow position: chrX:29602563-29602280 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 101

Conread position: 2-303
Cow position: chrX:23341516-23341199 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 178

Conread position: 2-363
Cow position: chrX:31728940-31729315 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 39

Conread position: 2-369
Cow position: chrX:37489203-37489595 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 174

Conread position: 2-371
Cow position: chrX:31373076-31373441 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 125

Conread position: 2-375
Cow position: chrX:9128533-9128927 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-375
Cow position: chrX:20582508-20582901 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 78

Conread position: 2-376
Cow position: chrX:27446172-27446560 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 108

Conread position: 2-377
Cow position: chrX:22812539-22812933 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 318

Conread position: 2-377
Cow position: chrX:23135053-23135441 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 334

Conread position: 2-377
Cow position: chrX:24424924-24424515 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 286
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 258

Conread position: 2-377
Cow position: chrX:27498244-27498641 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 2-377
Cow position: chrX:38072290-38071898 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-381
Cow position: chrX:9651569-9651169 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 292

Conread position: 2-381
Cow position: chrX:12309909-12309512 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 180

Conread position: 2-381
Cow position: chrX:22115807-22115405 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 64

Conread position: 2-381
Cow position: chrX:31261159-31260753 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 111

Conread position: 2-381
Cow position: chrX:40452743-40452336 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 38

Conread position: 2-381
Cow position: chrX:41192166-41192559 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 302

Conread position: 2-382
Cow position: chrX:6493209-6493608 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-383
Cow position: chrX:11083133-11082735 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 95

Conread position: 2-383
Cow position: chrX:22811363-22811764 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 182

Conread position: 2-383
Cow position: chrX:23316943-23316544 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 2-383
Cow position: chrX:31202318-31202719 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 167, 23

Conread position: 2-383
Cow position: chrX:36250387-36249983 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 184

Conread position: 2-383
Cow position: chrX:38963590-38963985 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 314

Conread position: 2-383
Cow position: chrX:41156788-41157190 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 344

Conread position: 2-384
Cow position: chrX:22600936-22600537 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 75

Conread position: 3-373
Cow position: chrX:13912574-13912949 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 14

Conread position: 5-361
Cow position: chrX:42470456-42470080 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 53

Conread position: 8-377
Cow position: chrX:12249285-12249676 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 59

Conread position: 11-381
Cow position: chrX:40481384-40480996 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 102

Conread position: 12-258
Cow position: chrX:4482438-4482688 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 145

Conread position: 18-377
Cow position: chrX:34754700-34754319 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 18-380
Cow position: chrX:5871810-5872189 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 113

Conread position: 22-361
Cow position: chrX:2351559-2351919 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 162

Conread position: 25-382
Cow position: chrX:35223803-35224176 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 8

Conread position: 25-383
Cow position: chrX:3161513-3161135 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 134

Conread position: 26-363
Cow position: chrX:12437730-12437381 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 7

Conread position: 27-381
Cow position: chrX:34532033-34532401 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 157

Conread position: 27-383
Cow position: chrX:34238222-34238599 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 32-381
Cow position: chrX:13648277-13647912 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 348

Conread position: 47-383
Cow position: chrX:18695403-18695041 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 66

Conread position: 49-383
Cow position: chrX:17794517-17794864 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 137

Conread position: 68-381
Cow position: chrX:13922985-13923295 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 45

Conread position: 77-331
Cow position: chrX:42222016-42221745 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 107

Conread position: 94-377
Cow position: chrX:26441211-26440907 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 58, 104

Conread position: 113-353
Cow position: chrX:38577120-38577381 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 181

Conread position: 116-383
Cow position: chrX:15147591-15147310 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 37

Conread position: 146-381
Cow position: chrX:32978624-32978380 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 58, 6

Conread position: 147-361
Cow position: chrX:25283507-25283289 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 26

Conread position: 149-381
Cow position: chrX:31250027-31250266 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 57, 24

Conread position: 150-363
Cow position: chrX:40648302-40648522 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 23

Conread position: 150-377
Cow position: chrX:32188723-32188487 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 23

Conread position: 150-381
Cow position: chrX:25035750-25035511 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 23

Conread position: 150-381
Cow position: chrX:34401634-34401871 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 16

Conread position: 152-367
Cow position: chrX:5118845-5118624 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 53, 21

Conread position: 152-383
Cow position: chrX:11806378-11806138 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 14

Conread position: 152-383
Cow position: chrX:33855602-33855354 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 21

Conread position: 153-383
Cow position: chrX:917731-917493 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 51, 20

Conread position: 153-383
Cow position: chrX:10916393-10916628 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 20

Conread position: 154-380
Cow position: chrX:16529645-16529881 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 12

Conread position: 159-377
Cow position: chrX:9227340-9227109 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 129

Conread position: 162-383
Cow position: chrX:23024351-23024582 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 44, 123

Conread position: 166-383
Cow position: chrX:31436131-31436357 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 209

Conread position: 168-383
Cow position: chrX:11844585-11844368 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 139

Conread position: 168-383
Cow position: chrX:37843373-37843599 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 169-381
Cow position: chrX:32747312-32747537 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 170-381
Cow position: chrX:7718511-7718731 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 264-394
Cow position: chrX:7710932-7710802 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0