Cow genome map

Conread name: Spl1-SPL010025A02

Conread position: 1-124
Cow position: chr1:8287540-8287415 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 2-158
Cow position: chr1:5023642-5023488 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 3-116
Cow position: chr1:87149722-87149609 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-118
Cow position: chr1:49980802-49980917 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-119
Cow position: chr1:15333984-15334098 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 3-119
Cow position: chr1:91066059-91065947 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 3-120
Cow position: chr1:20125883-20126006 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 3-121
Cow position: chr1:90820386-90820268 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-122
Cow position: chr1:32014289-32014404 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 3-125
Cow position: chr1:54156642-54156518 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 3-127
Cow position: chr1:39684053-39683925 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 29, 113

Conread position: 3-128
Cow position: chr1:25021982-25021861 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 3-130
Cow position: chr1:6731273-6731400 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chr1:63994462-63994331 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 109

Conread position: 3-136
Cow position: chr1:242650-242779 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 39

Conread position: 3-136
Cow position: chr1:22823998-22824135 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 107

Conread position: 3-136
Cow position: chr1:47790573-47790439 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 38

Conread position: 3-140
Cow position: chr1:41022512-41022650 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 115, 38

Conread position: 3-141
Cow position: chr1:43340541-43340402 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 113

Conread position: 3-141
Cow position: chr1:79178721-79178862 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 122

Conread position: 3-141
Cow position: chr1:95835705-95835564 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 122

Conread position: 3-145
Cow position: chr1:99637161-99637013 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 3-146
Cow position: chr1:25955988-25956134 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 144

Conread position: 3-149
Cow position: chr1:1380090-1380240 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 123

Conread position: 3-151
Cow position: chr1:16060911-16060766 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 132, 25

Conread position: 3-154
Cow position: chr1:46245648-46245486 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 3-156
Cow position: chr1:31274897-31274742 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 112

Conread position: 3-157
Cow position: chr1:38706761-38706605 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 83

Conread position: 3-157
Cow position: chr1:65160220-65160376 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 122

Conread position: 4-148
Cow position: chr1:31347837-31347695 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 4-153
Cow position: chr1:89437631-89437483 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 108, 37

Conread position: 5-119
Cow position: chr1:3923705-3923594 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 5-123
Cow position: chr1:63460973-63461092 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 5-129
Cow position: chr1:51292240-51292362 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 5-129
Cow position: chr1:95156869-95156743 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 5-135
Cow position: chr1:98557024-98556893 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 108

Conread position: 5-143
Cow position: chr1:72422314-72422169 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 5-150
Cow position: chr1:71119615-71119762 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 7

Conread position: 5-157
Cow position: chr1:8778240-8778089 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 134, 36

Conread position: 5-164
Cow position: chr1:41138049-41137896 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 6-127
Cow position: chr1:78079821-78079942 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 27

Conread position: 7-120
Cow position: chr1:41027171-41027283 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 7-124
Cow position: chr1:196908-196793 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 14

Conread position: 7-124
Cow position: chr1:42887180-42887067 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 7-127
Cow position: chr1:73644410-73644289 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 7-128
Cow position: chr1:24132966-24132844 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 7-128
Cow position: chr1:102611624-102611743 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 104, 34

Conread position: 7-133
Cow position: chr1:80423634-80423508 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-136
Cow position: chr1:96007051-96006922 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 34

Conread position: 7-139
Cow position: chr1:95152968-95153102 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 118

Conread position: 7-144
Cow position: chr1:70483237-70483099 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 22

Conread position: 7-146
Cow position: chr1:54267842-54267701 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 94, 122

Conread position: 7-146
Cow position: chr1:79630819-79630684 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 24

Conread position: 7-157
Cow position: chr1:23101772-23101922 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 76, 133

Conread position: 7-163
Cow position: chr1:6304776-6304623 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 8-124
Cow position: chr1:81568930-81568813 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 8-139
Cow position: chr1:42175825-42175956 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 105

Conread position: 9-124
Cow position: chr1:82538027-82538142 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-156
Cow position: chr1:81477762-81477617 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 9-158
Cow position: chr1:52429460-52429308 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 10-125
Cow position: chr1:73940675-73940788 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 12-124
Cow position: chr1:48618142-48618032 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 13-150
Cow position: chr1:6394660-6394800 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 25

Conread position: 32-128
Cow position: chr1:2935288-2935384 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 33-138
Cow position: chr1:36875432-36875536 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 34-138
Cow position: chr1:22466720-22466614 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 209-796
Cow position: chr1:95698179-95698757 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 122

Conread position: 1-151
Cow position: chr10:44513201-44513049 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 27

Conread position: 3-119
Cow position: chr10:19372273-19372154 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 3-119
Cow position: chr10:22390661-22390777 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 104, 5

Conread position: 3-119
Cow position: chr10:39387517-39387628 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 3-120
Cow position: chr10:31528033-31528149 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 25

Conread position: 3-124
Cow position: chr10:36945739-36945614 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 3-126
Cow position: chr10:58149106-58148982 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 3-129
Cow position: chr10:28223276-28223406 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 3-134
Cow position: chr10:15602118-15601980 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-136
Cow position: chr10:37014697-37014833 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 74

Conread position: 3-137
Cow position: chr10:30923231-30923099 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 33

Conread position: 3-141
Cow position: chr10:41132328-41132466 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 9

Conread position: 3-143
Cow position: chr10:35715526-35715382 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 3-143
Cow position: chr10:45658208-45658343 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 3-146
Cow position: chr10:27544516-27544660 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 3-161
Cow position: chr10:3985953-3986113 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 4-139
Cow position: chr10:38195913-38195773 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 5-124
Cow position: chr10:25142472-25142351 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 5-124
Cow position: chr10:55270954-55270831 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 41

Conread position: 5-143
Cow position: chr10:54724188-54724056 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 5-153
Cow position: chr10:17518783-17518634 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 110

Conread position: 6-113
Cow position: chr10:24422109-24421998 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 6-116
Cow position: chr10:58183742-58183634 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 7-110
Cow position: chr10:2857114-2857218 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 7-114
Cow position: chr10:54848845-54848952 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-119
Cow position: chr10:24035953-24035839 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 7-120
Cow position: chr10:9575981-9575868 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-126
Cow position: chr10:1073026-1072904 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 7-128
Cow position: chr10:40998925-40999047 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 7-134
Cow position: chr10:9959281-9959416 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 7-135
Cow position: chr10:23346236-23346111 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 7-145
Cow position: chr10:37508082-37507947 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 7-150
Cow position: chr10:31027575-31027432 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 106

Conread position: 7-161
Cow position: chr10:39124200-39124356 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 122

Conread position: 9-140
Cow position: chr10:19191823-19191952 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 13-128
Cow position: chr10:18751402-18751286 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 13-146
Cow position: chr10:25149960-25150093 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 14-140
Cow position: chr10:24560918-24560788 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 14

Conread position: 15-131
Cow position: chr10:60962510-60962625 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 2-138
Cow position: chr11:6784276-6784411 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 3-117
Cow position: chr11:31507978-31508089 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 3-119
Cow position: chr11:13043076-13042960 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-119
Cow position: chr11:63485007-63485120 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 3-119
Cow position: chr11:75915063-75915173 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 3-121
Cow position: chr11:69417471-69417594 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-123
Cow position: chr11:86925891-86925772 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 15

Conread position: 3-125
Cow position: chr11:65607619-65607496 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 25

Conread position: 3-126
Cow position: chr11:57873878-57874003 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 108

Conread position: 3-127
Cow position: chr11:82733080-82732954 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 91, 37

Conread position: 3-129
Cow position: chr11:70273530-70273659 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 88

Conread position: 3-132
Cow position: chr11:49396456-49396326 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 122

Conread position: 3-134
Cow position: chr11:28078563-28078691 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 3-136
Cow position: chr11:70756547-70756678 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 48

Conread position: 3-141
Cow position: chr11:2937594-2937463 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 3-141
Cow position: chr11:16314942-16315083 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 122

Conread position: 3-141
Cow position: chr11:39462693-39462830 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 37

Conread position: 3-141
Cow position: chr11:62742576-62742441 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 3-154
Cow position: chr11:6320063-6319911 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 112

Conread position: 5-118
Cow position: chr11:30638878-30638765 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-144
Cow position: chr11:62620448-62620593 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 132

Conread position: 5-146
Cow position: chr11:70206390-70206529 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 115, 26

Conread position: 5-156
Cow position: chr11:31525580-31525428 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 111, 35

Conread position: 7-120
Cow position: chr11:21844065-21843950 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 7-124
Cow position: chr11:62789204-62789319 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 7-128
Cow position: chr11:15591401-15591283 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 7-132
Cow position: chr11:81175671-81175798 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 119

Conread position: 7-133
Cow position: chr11:4602226-4602352 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 71, 105

Conread position: 7-133
Cow position: chr11:48296104-48296227 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 7-138
Cow position: chr11:23407538-23407664 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 7-140
Cow position: chr11:44615090-44614955 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 7-157
Cow position: chr11:1932416-1932262 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 7-157
Cow position: chr11:30172378-30172521 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 7-164
Cow position: chr11:48544515-48544666 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 11-152
Cow position: chr11:36182772-36182909 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 2-119
Cow position: chr12:23939265-23939385 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 52

Conread position: 2-128
Cow position: chr12:44892254-44892384 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 3-112
Cow position: chr12:5635404-5635293 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 3-119
Cow position: chr12:33976248-33976369 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 3-119
Cow position: chr12:37008658-37008544 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-120
Cow position: chr12:40157976-40157861 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 3-121
Cow position: chr12:25299408-25299529 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 65

Conread position: 3-135
Cow position: chr12:27421502-27421636 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 3-141
Cow position: chr12:43974338-43974483 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 3-147
Cow position: chr12:13911524-13911381 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 38

Conread position: 3-149
Cow position: chr12:40910236-40910094 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 9

Conread position: 3-157
Cow position: chr12:37718722-37718566 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 128

Conread position: 5-118
Cow position: chr12:31841620-31841735 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 5-146
Cow position: chr12:6958270-6958411 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 105

Conread position: 5-151
Cow position: chr12:38679100-38679245 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 5-156
Cow position: chr12:23105988-23106140 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 128

Conread position: 7-120
Cow position: chr12:14986802-14986914 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 7-134
Cow position: chr12:7884628-7884496 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 7-140
Cow position: chr12:17254196-17254326 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 7-140
Cow position: chr12:35664009-35664144 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 9-136
Cow position: chr12:23714730-23714855 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 9-156
Cow position: chr12:43551160-43551017 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 19-151
Cow position: chr12:38587218-38587088 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 1-119
Cow position: chr13:12673388-12673506 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position: chr13:13533764-13533916 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 2-118
Cow position: chr13:21425925-21426036 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 3-111
Cow position: chr13:56958879-56958766 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-119
Cow position: chr13:6974059-6973944 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 3-119
Cow position: chr13:8367616-8367500 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-119
Cow position: chr13:14576111-14575997 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 3-123
Cow position: chr13:10522835-10522715 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 39

Conread position: 3-138
Cow position: chr13:15993285-15993146 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 3-140
Cow position: chr13:21275757-21275621 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 70

Conread position: 3-141
Cow position: chr13:8779154-8779012 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 3-141
Cow position: chr13:45352929-45352784 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 3-145
Cow position: chr13:21012867-21012722 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 115

Conread position: 3-151
Cow position: chr13:10925021-10925174 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 3-153
Cow position: chr13:9108777-9108927 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 117, 16

Conread position: 3-159
Cow position: chr13:17813369-17813215 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 60

Conread position: 3-162
Cow position: chr13:53847223-53847378 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 4-119
Cow position: chr13:4037817-4037704 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 4-148
Cow position: chr13:9124823-9124678 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 111, 37

Conread position: 5-118
Cow position: chr13:52055696-52055810 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 64

Conread position: 5-134
Cow position: chr13:21981076-21981203 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 5-134
Cow position: chr13:41979244-41979370 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 32

Conread position: 5-140
Cow position: chr13:21170422-21170292 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 5-152
Cow position: chr13:7097482-7097333 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 136

Conread position: 7-109
Cow position: chr13:23399660-23399558 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-114
Cow position: chr13:15289027-15289132 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 7-130
Cow position: chr13:23478796-23478672 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 106

Conread position: 7-135
Cow position: chr13:14063627-14063754 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 7-136
Cow position: chr13:23823138-23823264 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 7-136
Cow position: chr13:49795936-49795800 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 7-140
Cow position: chr13:37554979-37555112 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 109, 21

Conread position: 7-158
Cow position: chr13:13320691-13320538 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 7-162
Cow position: chr13:45439425-45439271 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 8-140
Cow position: chr13:52477753-52477886 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 122, 34

Conread position: 25-153
Cow position: chr13:20653985-20654116 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 28-139
Cow position: chr13:48037225-48037109 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 37-136
Cow position: chr13:15104877-15104781 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 3-113
Cow position: chr14:12961008-12961119 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 102

Conread position: 3-125
Cow position: chr14:6388930-6389054 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 113, 93

Conread position: 3-135
Cow position: chr14:8949605-8949476 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 11

Conread position: 3-136
Cow position: chr14:36443063-36443195 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 3-137
Cow position: chr14:27733562-27733427 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 3-140
Cow position: chr14:23078837-23078976 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 3-141
Cow position: chr14:5959032-5959177 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 3-147
Cow position: chr14:39097462-39097311 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 3-151
Cow position: chr14:13928532-13928387 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 34

Conread position: 3-153
Cow position: chr14:12137972-12137824 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 86

Conread position: 3-153
Cow position: chr14:18270316-18270168 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 120

Conread position: 3-154
Cow position: chr14:35381547-35381390 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 3-158
Cow position: chr14:15211886-15211732 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 136, 34

Conread position: 5-116
Cow position: chr14:39795572-39795463 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 5-148
Cow position: chr14:36559273-36559416 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 76

Conread position: 6-146
Cow position: chr14:37151986-37152126 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 22

Conread position: 7-127
Cow position: chr14:11577021-11576899 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 7-135
Cow position: chr14:20640678-20640806 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 103

Conread position: 8-146
Cow position: chr14:20667058-20667194 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 9-134
Cow position: chr14:21357507-21357381 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 119

Conread position: 12-126
Cow position: chr14:14710280-14710398 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 14-136
Cow position: chr14:38411246-38411127 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 23-183
Cow position: chr14:23695398-23695241 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 113, 25

Conread position: 2-124
Cow position: chr15:36391678-36391551 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 2-128
Cow position: chr15:49273961-49273837 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 19

Conread position: 3-122
Cow position: chr15:43626471-43626346 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 3-132
Cow position: chr15:5408895-5409023 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 115, 37

Conread position: 3-133
Cow position: chr15:22531669-22531545 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 3-140
Cow position: chr15:19950481-19950350 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 3-143
Cow position: chr15:20459306-20459448 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 121

Conread position: 3-146
Cow position: chr15:43114718-43114862 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 31

Conread position: 4-128
Cow position: chr15:19553923-19554051 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 4-135
Cow position: chr15:40562681-40562811 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 110

Conread position: 5-121
Cow position: chr15:795021-795135 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 33

Conread position: 5-132
Cow position: chr15:52791943-52791813 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 110

Conread position: 5-133
Cow position: chr15:35642015-35641884 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 120

Conread position: 5-134
Cow position: chr15:26896694-26896828 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 122

Conread position: 5-141
Cow position: chr15:41049462-41049597 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 111, 33

Conread position: 5-143
Cow position: chr15:21821924-21822067 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 6-135
Cow position: chr15:21893778-21893648 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 6-136
Cow position: chr15:15147206-15147339 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 119

Conread position: 7-128
Cow position: chr15:36353666-36353542 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 7-140
Cow position: chr15:47920152-47920282 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 7-146
Cow position: chr15:13513530-13513393 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 21

Conread position: 7-146
Cow position: chr15:22553543-22553680 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 114

Conread position: 7-153
Cow position: chr15:11908948-11909094 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 125

Conread position: 7-163
Cow position: chr15:25208759-25208919 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 9-162
Cow position: chr15:25125144-25124994 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 12-140
Cow position: chr15:10199324-10199200 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 37-133
Cow position: chr15:5273400-5273302 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 1-127
Cow position: chr16:11083083-11083208 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 3-112
Cow position: chr16:51143887-51143997 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 3-112
Cow position: chr16:56579996-56580104 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 3-117
Cow position: chr16:14242456-14242571 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 3-119
Cow position: chr16:44138405-44138286 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 106

Conread position: 3-121
Cow position: chr16:50569351-50569467 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 3-128
Cow position: chr16:30646600-30646724 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 114, 38

Conread position: 3-134
Cow position: chr16:18206047-18206180 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 98, 28

Conread position: 3-137
Cow position: chr16:31558989-31559125 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 122

Conread position: 3-138
Cow position: chr16:35297489-35297624 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 129

Conread position: 3-139
Cow position: chr16:39646701-39646835 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 38

Conread position: 3-140
Cow position: chr16:25419166-25419022 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-141
Cow position: chr16:4062693-4062561 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 28

Conread position: 3-143
Cow position: chr16:18572967-18572826 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 3-156
Cow position: chr16:38663623-38663465 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 3-159
Cow position: chr16:42253313-42253160 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 28

Conread position: 4-142
Cow position: chr16:22984842-22984975 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 5-121
Cow position: chr16:12324545-12324660 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 5-139
Cow position: chr16:7665727-7665863 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 120

Conread position: 5-146
Cow position: chr16:19282095-19282238 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 58

Conread position: 5-154
Cow position: chr16:17746126-17746274 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 128, 36

Conread position: 5-156
Cow position: chr16:51216956-51216804 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 32, 145

Conread position: 7-118
Cow position: chr16:48130303-48130192 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-119
Cow position: chr16:23681454-23681566 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-133
Cow position: chr16:31149469-31149594 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 7-135
Cow position: chr16:23881120-23880991 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 7-153
Cow position: chr16:31011419-31011567 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 7-201
Cow position: chr16:5396725-5396532 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 116

Conread position: 8-136
Cow position: chr16:49860328-49860455 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 9-128
Cow position: chr16:48613383-48613262 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 9-144
Cow position: chr16:4911352-4911220 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 32

Conread position: 12-141
Cow position: chr16:11584308-11584179 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 41

Conread position: 12-146
Cow position: chr16:9730110-9729971 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 94

Conread position: 1-146
Cow position: chr17:27606643-27606781 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 2-135
Cow position: chr17:4271237-4271099 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 125

Conread position: 3-118
Cow position: chr17:35457687-35457574 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 11

Conread position: 3-119
Cow position: chr17:3364721-3364834 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 3-119
Cow position: chr17:11920903-11920784 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 3-121
Cow position: chr17:11056037-11055920 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 40

Conread position: 3-124
Cow position: chr17:10414626-10414744 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 34

Conread position: 3-124
Cow position: chr17:20157735-20157858 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 3-128
Cow position: chr17:26448670-26448797 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 3-139
Cow position: chr17:7554136-7554005 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 3-140
Cow position: chr17:3387845-3387984 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 15

Conread position: 3-142
Cow position: chr17:32349195-32349333 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 114, 30

Conread position: 3-145
Cow position: chr17:39904601-39904748 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 3-146
Cow position: chr17:15684638-15684774 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 3-146
Cow position: chr17:23257576-23257446 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-148
Cow position: chr17:18673912-18673763 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 147

Conread position: 3-148
Cow position: chr17:28468250-28468401 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 28, 43

Conread position: 3-153
Cow position: chr17:20929369-20929521 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 34, 112

Conread position: 3-158
Cow position: chr17:40771958-40772113 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 119

Conread position: 5-116
Cow position: chr17:19471641-19471531 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 5-119
Cow position: chr17:22051460-22051346 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr17:17822218-17822338 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 5-129
Cow position: chr17:26225157-26225283 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 5-141
Cow position: chr17:21236652-21236791 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 120

Conread position: 5-151
Cow position: chr17:21973000-21972850 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 108

Conread position: 5-151
Cow position: chr17:24987336-24987475 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 36

Conread position: 7-121
Cow position: chr17:25473148-25473033 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 7-133
Cow position: chr17:6318735-6318611 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 7-140
Cow position: chr17:7959312-7959444 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 7-142
Cow position: chr17:21039689-21039823 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 7-153
Cow position: chr17:21718865-21718718 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 105

Conread position: 7-155
Cow position: chr17:20930436-20930586 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 7-161
Cow position: chr17:11912371-11912219 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 8-119
Cow position: chr17:22223848-22223959 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-124
Cow position: chr17:8809371-8809258 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 1-124
Cow position: chr18:9010760-9010880 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 1-124
Cow position: chr18:39860728-39860604 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 115

Conread position: 1-157
Cow position: chr18:30295554-30295399 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 128, 33

Conread position: 2-140
Cow position: chr18:44514139-44514280 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 114

Conread position: 3-110
Cow position: chr18:5647867-5647970 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 3-115
Cow position: chr18:38669774-38669656 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 3-119
Cow position: chr18:19809628-19809512 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr18:10117794-10117909 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 3-121
Cow position: chr18:40028273-40028397 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 3-124
Cow position: chr18:641259-641140 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 3-124
Cow position: chr18:7414974-7414858 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 3-126
Cow position: chr18:18918906-18918787 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 3-127
Cow position: chr18:11867394-11867517 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 3-128
Cow position: chr18:52251803-52251672 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 3-128
Cow position: chr18:56181402-56181279 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 23

Conread position: 3-135
Cow position: chr18:1931404-1931273 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 3-136
Cow position: chr18:21751432-21751567 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 111

Conread position: 3-138
Cow position: chr18:5766467-5766599 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 25

Conread position: 3-139
Cow position: chr18:29264306-29264177 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 3-141
Cow position: chr18:247641-247506 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 131, 28

Conread position: 3-144
Cow position: chr18:4851429-4851288 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 81

Conread position: 3-158
Cow position: chr18:10758001-10757845 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 38

Conread position: 3-161
Cow position: chr18:22045360-22045202 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 111

Conread position: 3-164
Cow position: chr18:44909107-44909271 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 5-124
Cow position: chr18:18956825-18956705 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 5-132
Cow position: chr18:4485655-4485779 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 35

Conread position: 5-138
Cow position: chr18:17195289-17195153 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 5-144
Cow position: chr18:33364268-33364404 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 37

Conread position: 5-157
Cow position: chr18:51405855-51405709 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 7-118
Cow position: chr18:50095351-50095239 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 7-122
Cow position: chr18:51383339-51383224 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-128
Cow position: chr18:49602985-49602862 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 7-128
Cow position: chr18:50632384-50632264 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 12

Conread position: 7-131
Cow position: chr18:25598174-25598050 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-134
Cow position: chr18:47680570-47680696 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 7-134
Cow position: chr18:47865127-47865253 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 7-136
Cow position: chr18:22180719-22180593 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 7-140
Cow position: chr18:21410743-21410877 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 116

Conread position: 7-141
Cow position: chr18:42432031-42431900 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 130, 21

Conread position: 7-148
Cow position: chr18:41702892-41703034 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 105

Conread position: 8-125
Cow position: chr18:35112246-35112129 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 20

Conread position: 9-124
Cow position: chr18:45897790-45897903 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 13-132
Cow position: chr18:10214126-10214007 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 114

Conread position: 32-156
Cow position: chr18:40476094-40475966 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 1-139
Cow position: chr19:33832006-33832141 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 2-128
Cow position: chr19:6477983-6478115 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 83

Conread position: 3-115
Cow position: chr19:38637711-38637595 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 3-118
Cow position: chr19:24220431-24220314 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 3-118
Cow position: chr19:53478901-53479016 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-119
Cow position: chr19:16686908-16686789 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 80

Conread position: 3-119
Cow position: chr19:34166443-34166561 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 103
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 79

Conread position: 3-124
Cow position: chr19:11194686-11194566 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 38

Conread position: 3-124
Cow position: chr19:49290381-49290260 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-127
Cow position: chr19:41946796-41946922 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 3-134
Cow position: chr19:24068208-24068073 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 3-135
Cow position: chr19:48729157-48729024 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 46, 110

Conread position: 3-136
Cow position: chr19:12761027-12760891 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 122

Conread position: 3-139
Cow position: chr19:30541489-30541355 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 3-140
Cow position: chr19:6417685-6417821 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 3-140
Cow position: chr19:43499028-43498897 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-141
Cow position: chr19:52356328-52356470 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 3-142
Cow position: chr19:6854994-6855132 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 3-142
Cow position: chr19:13121207-13121067 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 113, 38

Conread position: 4-157
Cow position: chr19:42217239-42217083 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 112

Conread position: 4-158
Cow position: chr19:11191543-11191392 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 75

Conread position: 5-136
Cow position: chr19:31319238-31319365 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 5-136
Cow position: chr19:38732217-38732345 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 5-141
Cow position: chr19:23304412-23304275 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 118

Conread position: 5-146
Cow position: chr19:41024302-41024440 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 5-152
Cow position: chr19:4486072-4485926 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 73

Conread position: 7-141
Cow position: chr19:52187565-52187699 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-142
Cow position: chr19:46822788-46822921 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 106

Conread position: 7-149
Cow position: chr19:49221541-49221399 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 25-155
Cow position: chr19:20661309-20661183 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 106, 26

Conread position: 32-138
Cow position: chr19:21044484-21044592 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 3-109
Cow position: chr2:46315684-46315578 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-120
Cow position: chr2:45478509-45478396 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 3-121
Cow position: chr2:56021399-56021522 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 3-126
Cow position: chr2:24593955-24594072 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 3-127
Cow position: chr2:8576090-8576212 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 3-127
Cow position: chr2:19211969-19211846 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 114, 38

Conread position: 3-127
Cow position: chr2:30127202-30127079 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 61

Conread position: 3-128
Cow position: chr2:47165744-47165617 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 109

Conread position: 3-128
Cow position: chr2:54700544-54700669 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 110

Conread position: 3-129
Cow position: chr2:64465688-64465564 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 117, 97

Conread position: 3-129
Cow position: chr2:67047506-67047636 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 3-133
Cow position: chr2:68328765-68328633 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 3-135
Cow position: chr2:43990860-43990991 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 3-136
Cow position: chr2:22496220-22496095 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 3-136
Cow position: chr2:30394203-30394062 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 3-136
Cow position: chr2:36124518-36124656 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 3-137
Cow position: chr2:67810955-67810818 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 107

Conread position: 3-146
Cow position: chr2:16847269-16847415 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 127

Conread position: 3-146
Cow position: chr2:56102245-56102100 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 3-152
Cow position: chr2:485664-485813 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 111

Conread position: 4-119
Cow position: chr2:81480935-81481050 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr2:75407315-75407430 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 64

Conread position: 5-120
Cow position: chr2:69419495-69419384 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 5-138
Cow position: chr2:28452856-28452726 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 36

Conread position: 5-140
Cow position: chr2:15720725-15720853 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 5-140
Cow position: chr2:19025285-19025415 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 5-140
Cow position: chr2:85794882-85794745 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 110

Conread position: 5-145
Cow position: chr2:29394919-29394775 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 5-146
Cow position: chr2:46119678-46119534 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 5-159
Cow position: chr2:42975606-42975453 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 36

Conread position: 5-160
Cow position: chr2:71621958-71621802 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 6-124
Cow position: chr2:69142597-69142715 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-121
Cow position: chr2:31784021-31784133 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 7-124
Cow position: chr2:19137798-19137681 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 30

Conread position: 7-127
Cow position: chr2:18997811-18997929 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 7-128
Cow position: chr2:39187462-39187583 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-128
Cow position: chr2:55526683-55526562 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 106

Conread position: 7-137
Cow position: chr2:63568802-63568933 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 7-140
Cow position: chr2:1205396-1205532 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 7-140
Cow position: chr2:29806187-29806322 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 7-141
Cow position: chr2:43995028-43995157 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 30

Conread position: 7-144
Cow position: chr2:44051400-44051537 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 105

Conread position: 7-146
Cow position: chr2:80275202-80275062 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 117

Conread position: 7-151
Cow position: chr2:46052591-46052734 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 52, 18

Conread position: 7-159
Cow position: chr2:42608158-42608307 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 13-126
Cow position: chr2:58336126-58336011 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 15-139
Cow position: chr2:45597079-45597203 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 24-150
Cow position: chr2:65433677-65433803 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 112, 120

Conread position: 3-119
Cow position: chr20:11499138-11499250 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 3-124
Cow position: chr20:3599268-3599150 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 3-125
Cow position: chr20:17251847-17251975 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 3-128
Cow position: chr20:4945124-4944996 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 113

Conread position: 3-128
Cow position: chr20:36741593-36741718 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 92

Conread position: 3-129
Cow position: chr20:35605337-35605460 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 3-133
Cow position: chr20:11909557-11909424 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 97

Conread position: 3-135
Cow position: chr20:19623114-19622984 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 35

Conread position: 3-139
Cow position: chr20:19899439-19899572 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 25

Conread position: 3-140
Cow position: chr20:13795247-13795377 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 3-141
Cow position: chr20:34097823-34097679 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 124

Conread position: 3-146
Cow position: chr20:2316295-2316154 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 33

Conread position: 3-148
Cow position: chr20:14283050-14283198 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 122

Conread position: 3-152
Cow position: chr20:21941564-21941706 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 3-155
Cow position: chr20:25464915-25464762 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 140, 0

Conread position: 4-117
Cow position: chr20:6048435-6048318 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 24

Conread position: 4-148
Cow position: chr20:21279517-21279656 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 5-137
Cow position: chr20:33557525-33557659 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 86

Conread position: 6-148
Cow position: chr20:10200479-10200632 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 6-163
Cow position: chr20:27315111-27315274 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 22

Conread position: 7-115
Cow position: chr20:33435026-33434916 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 55

Conread position: 7-120
Cow position: chr20:12581820-12581708 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 7-137
Cow position: chr20:32550389-32550258 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 116

Conread position: 7-149
Cow position: chr20:7659095-7658950 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 109

Conread position: 9-112
Cow position: chr20:3148820-3148921 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 9-133
Cow position: chr20:4891983-4891856 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 10-119
Cow position: chr20:14980369-14980260 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-142
Cow position: chr20:2827919-2828047 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 112, 96

Conread position: 28-151
Cow position: chr20:14807039-14807161 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 2-126
Cow position: chr21:43655851-43655977 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 3-118
Cow position: chr21:29418719-29418840 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 3-119
Cow position: chr21:11779391-11779270 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 3-119
Cow position: chr21:30970086-30970203 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 73

Conread position: 3-127
Cow position: chr21:5214499-5214632 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 3-127
Cow position: chr21:18495371-18495492 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 115, 39

Conread position: 3-128
Cow position: chr21:12154279-12154401 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 3-128
Cow position: chr21:40475649-40475781 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-133
Cow position: chr21:19136750-19136619 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 39

Conread position: 3-134
Cow position: chr21:29011822-29011693 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 3-135
Cow position: chr21:20185399-20185530 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 9

Conread position: 3-136
Cow position: chr21:3135718-3135585 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 85

Conread position: 3-139
Cow position: chr21:42227548-42227410 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 63

Conread position: 3-157
Cow position: chr21:40589331-40589169 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 3-159
Cow position: chr21:42144974-42145130 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 114, 16

Conread position: 3-160
Cow position: chr21:29658426-29658585 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 31

Conread position: 4-127
Cow position: chr21:957822-957942 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 4-137
Cow position: chr21:14464735-14464872 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 4-140
Cow position: chr21:44724221-44724089 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 5-110
Cow position: chr21:30977111-30977009 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 5-123
Cow position: chr21:641740-641854 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 5-137
Cow position: chr21:27521187-27521058 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 5-139
Cow position: chr21:27744178-27744315 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 18

Conread position: 5-146
Cow position: chr21:30368229-30368369 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 7-119
Cow position: chr21:28955775-28955887 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-119
Cow position: chr21:37479438-37479322 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 7-128
Cow position: chr21:40432622-40432742 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 112, 34

Conread position: 7-137
Cow position: chr21:11761718-11761849 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 7-152
Cow position: chr21:45835234-45835091 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 104

Conread position: 9-117
Cow position: chr21:41668786-41668894 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-112
Cow position: chr22:23675886-23675779 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1-127
Cow position: chr22:44410803-44410924 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 3-115
Cow position: chr22:4156733-4156619 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 3-116
Cow position: chr22:22860828-22860713 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 3-118
Cow position: chr22:12997752-12997639 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 25

Conread position: 3-128
Cow position: chr22:8287267-8287390 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 3-128
Cow position: chr22:30293772-30293900 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 9

Conread position: 3-128
Cow position: chr22:37201933-37202058 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 9

Conread position: 3-128
Cow position: chr22:45771940-45771817 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 3-130
Cow position: chr22:2876714-2876588 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 111

Conread position: 3-135
Cow position: chr22:14143037-14142907 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 3-136
Cow position: chr22:2409048-2408911 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 3-140
Cow position: chr22:27275546-27275688 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 3-141
Cow position: chr22:530494-530352 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 3-141
Cow position: chr22:8883095-8883232 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 3-145
Cow position: chr22:16442346-16442483 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 34

Conread position: 3-145
Cow position: chr22:18403329-18403470 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 110

Conread position: 3-150
Cow position: chr22:33399405-33399256 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 3-203
Cow position: chr22:29345673-29345879 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 19, 40

Conread position: 4-136
Cow position: chr22:1714780-1714645 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 106

Conread position: 4-142
Cow position: chr22:33447996-33447854 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 4-151
Cow position: chr22:23630267-23630123 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 5-128
Cow position: chr22:15490740-15490868 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 5-128
Cow position: chr22:31599517-31599641 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 111

Conread position: 5-129
Cow position: chr22:1849160-1849287 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 5-131
Cow position: chr22:39507955-39507829 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 111

Conread position: 5-151
Cow position: chr22:12678336-12678189 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 120

Conread position: 5-152
Cow position: chr22:14488021-14488171 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 120

Conread position: 5-153
Cow position: chr22:5837344-5837499 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 5-153
Cow position: chr22:12777291-12777149 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 5-157
Cow position: chr22:9372607-9372767 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 7-119
Cow position: chr22:7584153-7584042 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 7-122
Cow position: chr22:16813884-16813999 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-122
Cow position: chr22:44717809-44717923 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 7-124
Cow position: chr22:9735357-9735473 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 7-127
Cow position: chr22:30818300-30818415 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 7-132
Cow position: chr22:40349431-40349554 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 7-137
Cow position: chr22:12573292-12573425 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 7-142
Cow position: chr22:29546727-29546861 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 7-143
Cow position: chr22:24903680-24903818 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 0

Conread position: 15-139
Cow position: chr22:11134830-11134952 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 25-153
Cow position: chr22:8733240-8733112 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 6, 121

Conread position: 33-134
Cow position: chr22:20846991-20847092 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 33-158
Cow position: chr22:25237014-25236888 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 2-127
Cow position: chr23:34356728-34356854 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 112

Conread position: 2-134
Cow position: chr23:2563750-2563888 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-118
Cow position: chr23:21423857-21423972 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-123
Cow position: chr23:35930040-35930159 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 82

Conread position: 3-133
Cow position: chr23:10675941-10676075 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 3-136
Cow position: chr23:1739544-1739680 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 112

Conread position: 3-141
Cow position: chr23:21664394-21664528 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 3-143
Cow position: chr23:4803048-4803193 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 124

Conread position: 3-149
Cow position: chr23:307545-307695 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 122

Conread position: 3-153
Cow position: chr23:32621375-32621530 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 3-157
Cow position: chr23:4291444-4291601 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 133

Conread position: 3-159
Cow position: chr23:39813589-39813750 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 3-161
Cow position: chr23:5617663-5617824 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 5-118
Cow position: chr23:26949288-26949397 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 5-136
Cow position: chr23:2471094-2471231 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 6-135
Cow position: chr23:32479925-32479792 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 6-139
Cow position: chr23:9876906-9876776 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 47

Conread position: 7-118
Cow position: chr23:10416334-10416222 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 7-123
Cow position: chr23:21638470-21638584 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 7-128
Cow position: chr23:15056478-15056360 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 7-129
Cow position: chr23:534321-534443 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-136
Cow position: chr23:7155606-7155477 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 24, 36

Conread position: 7-141
Cow position: chr23:1510833-1510700 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 7-142
Cow position: chr23:24689380-24689515 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 104

Conread position: 7-153
Cow position: chr23:12405727-12405576 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 58

Conread position: 8-119
Cow position: chr23:17597521-17597629 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 25-136
Cow position: chr23:22207787-22207897 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 2-131
Cow position: chr24:2992820-2992689 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 127

Conread position: 2-136
Cow position: chr24:39910972-39910832 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 3-119
Cow position: chr24:5152586-5152706 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 3-119
Cow position: chr24:19187000-19187112 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 3-119
Cow position: chr24:31160975-31160862 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 3-125
Cow position: chr24:13231101-13231223 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 82

Conread position: 3-128
Cow position: chr24:30483878-30483753 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 115, 38

Conread position: 3-132
Cow position: chr24:27719464-27719337 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 38, 0

Conread position: 3-141
Cow position: chr24:12120959-12121103 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 3-141
Cow position: chr24:15861531-15861392 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 112

Conread position: 3-146
Cow position: chr24:28566271-28566130 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 109, 34

Conread position: 3-147
Cow position: chr24:18750770-18750919 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 3-151
Cow position: chr24:39523386-39523241 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 5-127
Cow position: chr24:21834894-21834775 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 5-128
Cow position: chr24:14551526-14551648 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 121, 92

Conread position: 5-155
Cow position: chr24:18405216-18405067 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 28, 108

Conread position: 6-140
Cow position: chr24:36286635-36286772 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 7-132
Cow position: chr24:42792420-42792546 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 7-153
Cow position: chr24:30313960-30313815 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 35

Conread position: 7-157
Cow position: chr24:21656475-21656627 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 23, 135

Conread position: 7-159
Cow position: chr24:30325714-30325564 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 9-143
Cow position: chr24:2380026-2380160 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 10

Conread position: 32-151
Cow position: chr24:39841441-39841326 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 3-98
Cow position: chr25:11855465-11855366 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-112
Cow position: chr25:11857900-11857791 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-119
Cow position: chr25:16491183-16491299 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-119
Cow position: chr25:20223663-20223550 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 3-128
Cow position: chr25:33100660-33100783 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 3-139
Cow position: chr25:28856523-28856660 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 3-140
Cow position: chr25:20008218-20008357 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 3-141
Cow position: chr25:5713178-5713040 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 37

Conread position: 3-157
Cow position: chr25:17725118-17725279 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-158
Cow position: chr25:7311311-7311150 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 101

Conread position: 3-164
Cow position: chr25:18201844-18201680 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 86

Conread position: 4-147
Cow position: chr25:11956890-11957036 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 4-148
Cow position: chr25:13565248-13565107 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 20

Conread position: 5-125
Cow position: chr25:28940054-28939932 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 5-137
Cow position: chr25:2662482-2662612 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 6-128
Cow position: chr25:7358582-7358456 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 6-146
Cow position: chr25:7012816-7012956 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 130, 105

Conread position: 7-136
Cow position: chr25:18934546-18934418 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 7-145
Cow position: chr25:24669360-24669224 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 7-158
Cow position: chr25:7750541-7750688 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 12-133
Cow position: chr25:19301496-19301614 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 13-127
Cow position: chr25:17707905-17708015 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 13-153
Cow position: chr25:22577210-22577073 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 14-140
Cow position: chr25:9025217-9025343 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 100

Conread position: 14-141
Cow position: chr25:6940392-6940268 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 14-151
Cow position: chr25:12755396-12755258 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 97

Conread position: 32-135
Cow position: chr25:15218274-15218377 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 66

Conread position: 1-157
Cow position: chr26:6794252-6794404 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 85

Conread position: 2-124
Cow position: chr26:13862935-13862813 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-148
Cow position: chr26:18651748-18651896 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 3-116
Cow position: chr26:25029637-25029754 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 3-119
Cow position: chr26:9099428-9099313 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 39

Conread position: 3-119
Cow position: chr26:9662128-9662008 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 3-119
Cow position: chr26:26245067-26244948 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 3-127
Cow position: chr26:12893324-12893202 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 3-135
Cow position: chr26:5168497-5168625 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 3-136
Cow position: chr26:28727-28597 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 3-137
Cow position: chr26:27482462-27482325 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 122

Conread position: 3-138
Cow position: chr26:4807658-4807800 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 3-138
Cow position: chr26:4854648-4854782 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 3-142
Cow position: chr26:23097090-23096952 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 111

Conread position: 5-118
Cow position: chr26:17057785-17057894 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 5-134
Cow position: chr26:17554512-17554384 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 36

Conread position: 5-138
Cow position: chr26:15908658-15908521 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 5-139
Cow position: chr26:33038117-33037986 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 5-141
Cow position: chr26:26919639-26919781 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 5-157
Cow position: chr26:5418416-5418270 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 6-157
Cow position: chr26:33253209-33253059 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 138, 0

Conread position: 7-117
Cow position: chr26:12537432-12537325 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 7-119
Cow position: chr26:30955253-30955367 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 58

Conread position: 7-134
Cow position: chr26:22892337-22892212 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 7-151
Cow position: chr26:33201962-33201821 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 7-154
Cow position: chr26:9535624-9535766 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 8-112
Cow position: chr26:32897768-32897666 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 9-129
Cow position: chr26:20291582-20291462 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-129
Cow position: chr27:31210419-31210294 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 2-146
Cow position: chr27:26226419-26226562 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 3-116
Cow position: chr27:20048503-20048392 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 3-117
Cow position: chr27:16705120-16705007 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 38

Conread position: 3-118
Cow position: chr27:18435264-18435377 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 3-118
Cow position: chr27:21951109-21951227 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 3-127
Cow position: chr27:31386762-31386885 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 3-134
Cow position: chr27:6660973-6660841 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 114, 40

Conread position: 3-135
Cow position: chr27:20548680-20548547 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 107

Conread position: 3-141
Cow position: chr27:26400852-26400987 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 127, 38

Conread position: 3-155
Cow position: chr27:19992018-19991864 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 5-124
Cow position: chr27:29614909-29614789 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 5-127
Cow position: chr27:25000093-25000223 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 5-147
Cow position: chr27:24952087-24952227 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 5-152
Cow position: chr27:10581402-10581252 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 5-152
Cow position: chr27:16965444-16965292 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 6-119
Cow position: chr27:31248743-31248854 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 6-137
Cow position: chr27:14269460-14269595 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 120

Conread position: 7-134
Cow position: chr27:16103677-16103548 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 7-151
Cow position: chr27:24358200-24358059 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 133, 28

Conread position: 7-152
Cow position: chr27:22220416-22220266 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 7-152
Cow position: chr27:26939942-26939797 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 16, 35

Conread position: 23-135
Cow position: chr27:14343588-14343698 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 42-122
Cow position: chr27:18749091-18749171 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 72
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-145
Cow position: chr28:3484675-3484816 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 113

Conread position: 3-116
Cow position: chr28:19394960-19395069 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 3-125
Cow position: chr28:5630188-5630317 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 3-127
Cow position: chr28:5436997-5436872 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 112

Conread position: 3-128
Cow position: chr28:7964579-7964460 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 3-132
Cow position: chr28:4937150-4937017 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 3-133
Cow position: chr28:4163491-4163354 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 3-133
Cow position: chr28:16200651-16200520 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 113

Conread position: 3-135
Cow position: chr28:22170187-22170057 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 3-136
Cow position: chr28:3449404-3449534 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 3-136
Cow position: chr28:32014876-32015011 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 3-139
Cow position: chr28:7697890-7697751 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 122

Conread position: 3-139
Cow position: chr28:16252314-16252181 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 3-140
Cow position: chr28:3011178-3011037 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 3-140
Cow position: chr28:8283606-8283471 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 32

Conread position: 3-140
Cow position: chr28:11743736-11743597 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 73

Conread position: 3-140
Cow position: chr28:11866573-11866440 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 3-141
Cow position: chr28:6301173-6301314 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 122

Conread position: 3-146
Cow position: chr28:15362671-15362815 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 40

Conread position: 3-148
Cow position: chr28:3726117-3725972 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 110

Conread position: 3-150
Cow position: chr28:10958894-10959036 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 3-157
Cow position: chr28:16964875-16964720 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 113

Conread position: 3-157
Cow position: chr28:17620270-17620109 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 150

Conread position: 3-158
Cow position: chr28:19128083-19127918 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 5-119
Cow position: chr28:8787633-8787748 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 5-119
Cow position: chr28:26960815-26960704 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 5-141
Cow position: chr28:4866479-4866348 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 5-162
Cow position: chr28:6563803-6563643 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 120

Conread position: 6-119
Cow position: chr28:28501340-28501450 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 6-134
Cow position: chr28:19038924-19038793 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 7-119
Cow position: chr28:4013180-4013292 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-133
Cow position: chr28:5254970-5255094 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 7-137
Cow position: chr28:777772-777902 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 105

Conread position: 7-138
Cow position: chr28:21046497-21046363 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 111

Conread position: 7-141
Cow position: chr28:10140488-10140353 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 66

Conread position: 7-144
Cow position: chr28:5235970-5236107 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 103

Conread position: 7-153
Cow position: chr28:24082366-24082515 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 3-119
Cow position: chr29:4023083-4023198 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 3-126
Cow position: chr29:15947252-15947379 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 3-136
Cow position: chr29:14746865-14746998 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-139
Cow position: chr29:23874545-23874684 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 122

Conread position: 3-141
Cow position: chr29:31835357-31835491 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 3-142
Cow position: chr29:43088393-43088532 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 25

Conread position: 3-146
Cow position: chr29:10203857-10203999 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 7-109
Cow position: chr29:36357215-36357321 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 7-115
Cow position: chr29:31929076-31929185 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 50

Conread position: 7-123
Cow position: chr29:19363799-19363913 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 7-128
Cow position: chr29:4070713-4070834 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 34

Conread position: 7-136
Cow position: chr29:10839030-10839160 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 7-136
Cow position: chr29:19949396-19949525 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-141
Cow position: chr29:40112471-40112602 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 9-118
Cow position: chr29:7452332-7452443 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 9-136
Cow position: chr29:659373-659502 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 13-119
Cow position: chr29:16279076-16279180 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 13-128
Cow position: chr29:41530944-41531062 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 112

Conread position: 1-153
Cow position: chr3:75966720-75966567 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 2-136
Cow position: chr3:22924312-22924183 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 3-115
Cow position: chr3:22078138-22078254 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 3-117
Cow position: chr3:60186212-60186331 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 3-118
Cow position: chr3:18686969-18687080 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 3-119
Cow position: chr3:53249551-53249665 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 3-119
Cow position: chr3:59681841-59681727 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 3-121
Cow position: chr3:49369674-49369790 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 3-123
Cow position: chr3:2434675-2434555 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 48, 95

Conread position: 3-125
Cow position: chr3:15153754-15153876 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 38

Conread position: 3-128
Cow position: chr3:76056222-76056099 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 3-132
Cow position: chr3:55106086-55105955 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 112

Conread position: 3-134
Cow position: chr3:2016498-2016625 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 3-135
Cow position: chr3:68587085-68587214 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 9

Conread position: 3-136
Cow position: chr3:35624482-35624348 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 6

Conread position: 3-136
Cow position: chr3:41863688-41863821 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 45

Conread position: 3-139
Cow position: chr3:14211920-14211788 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 3-140
Cow position: chr3:22820921-22821052 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 3-142
Cow position: chr3:11607884-11608019 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 3-145
Cow position: chr3:83491148-83491288 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 114, 34

Conread position: 3-146
Cow position: chr3:70402706-70402842 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 3-148
Cow position: chr3:68624280-68624425 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 123

Conread position: 3-151
Cow position: chr3:82366191-82366339 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 32, 108

Conread position: 3-152
Cow position: chr3:58527445-58527586 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 3-155
Cow position: chr3:58452105-58452259 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 122

Conread position: 3-156
Cow position: chr3:65058761-65058912 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 25

Conread position: 3-157
Cow position: chr3:79316751-79316909 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 37, 101

Conread position: 3-158
Cow position: chr3:14000488-14000340 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 3-159
Cow position: chr3:23804568-23804721 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 83

Conread position: 3-161
Cow position: chr3:71238216-71238373 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 108, 38

Conread position: 4-124
Cow position: chr3:28884098-28883975 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 4-133
Cow position: chr3:81234453-81234582 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-136
Cow position: chr3:84137751-84137619 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 119

Conread position: 4-141
Cow position: chr3:42933544-42933683 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 121

Conread position: 5-133
Cow position: chr3:65237089-65237222 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 5-136
Cow position: chr3:59317765-59317897 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 5-139
Cow position: chr3:4518118-4517984 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-155
Cow position: chr3:81616388-81616232 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 145

Conread position: 6-127
Cow position: chr3:48900267-48900143 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 109

Conread position: 7-120
Cow position: chr3:45881965-45882080 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 7-124
Cow position: chr3:39969795-39969681 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 7-127
Cow position: chr3:75907979-75908098 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 75, 35

Conread position: 7-129
Cow position: chr3:76269958-76270079 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 30

Conread position: 7-133
Cow position: chr3:27274595-27274720 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 7-136
Cow position: chr3:55318832-55318702 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 116

Conread position: 7-141
Cow position: chr3:59604910-59605043 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 7-153
Cow position: chr3:15160587-15160732 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 121, 34

Conread position: 9-121
Cow position: chr3:623820-623931 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 12-119
Cow position: chr3:2392896-2392789 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-141
Cow position: chr4:42231946-42231817 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 3-112
Cow position: chr4:1184835-1184946 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 3-118
Cow position: chr4:66412266-66412378 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 3-119
Cow position: chr4:30769114-30769228 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 3-119
Cow position: chr4:46136830-46136945 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 16

Conread position: 3-119
Cow position: chr4:67393171-67393291 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 3-119
Cow position: chr4:68358410-68358522 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 3-127
Cow position: chr4:19496574-19496704 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 3-128
Cow position: chr4:39010129-39010256 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 18

Conread position: 3-135
Cow position: chr4:27276464-27276332 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 82

Conread position: 3-135
Cow position: chr4:40392895-40393022 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 3-136
Cow position: chr4:46656209-46656348 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 3-137
Cow position: chr4:56410424-56410558 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 109

Conread position: 3-139
Cow position: chr4:17790212-17790079 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 123, 38

Conread position: 3-139
Cow position: chr4:32693868-32694006 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 130

Conread position: 3-142
Cow position: chr4:61608885-61608750 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 3-150
Cow position: chr4:8352485-8352337 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 110

Conread position: 3-156
Cow position: chr4:22546762-22546613 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 3-156
Cow position: chr4:49338121-49338273 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 115, 38

Conread position: 3-158
Cow position: chr4:4320911-4320757 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 111, 38

Conread position: 3-158
Cow position: chr4:50687786-50687633 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 110

Conread position: 4-141
Cow position: chr4:36876778-36876639 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 110

Conread position: 4-147
Cow position: chr4:58248482-58248630 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 5-117
Cow position: chr4:51617917-51617802 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 5-119
Cow position: chr4:28854193-28854080 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 5-124
Cow position: chr4:38209893-38209774 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-133
Cow position: chr4:51851294-51851418 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 7-124
Cow position: chr4:6202320-6202203 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-133
Cow position: chr4:34544390-34544516 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 110, 50

Conread position: 7-136
Cow position: chr4:34919190-34919063 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 7-136
Cow position: chr4:42423721-42423593 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 92

Conread position: 7-140
Cow position: chr4:30944038-30944169 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 8-111
Cow position: chr4:63293543-63293646 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-132
Cow position: chr4:9269815-9269689 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 9-163
Cow position: chr4:52823316-52823159 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 12-146
Cow position: chr4:53347887-53347760 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 19-135
Cow position: chr4:47451570-47451689 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 106

Conread position: 1-119
Cow position: chr5:20387264-20387386 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 1-119
Cow position: chr5:21617569-21617686 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 1-131
Cow position: chr5:55414326-55414196 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 114, 8

Conread position: 1-138
Cow position: chr5:52853082-52853218 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 24

Conread position: 1-150
Cow position: chr5:18579003-18579146 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 41

Conread position: 1-158
Cow position: chr5:15770345-15770180 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 2-136
Cow position: chr5:74039892-74039758 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 58

Conread position: 3-112
Cow position: chr5:44734612-44734503 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-119
Cow position: chr5:41885029-41885145 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-119
Cow position: chr5:44868470-44868586 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-120
Cow position: chr5:19752415-19752533 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 3-121
Cow position: chr5:14419897-14419786 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 3-125
Cow position: chr5:21375001-21374879 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-128
Cow position: chr5:42064318-42064449 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-128
Cow position: chr5:58487488-58487613 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-133
Cow position: chr5:57584989-57585119 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 119

Conread position: 3-135
Cow position: chr5:19811635-19811765 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 3-135
Cow position: chr5:50101261-50101132 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 3-136
Cow position: chr5:7676042-7675912 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 3-138
Cow position: chr5:13471221-13471361 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 3-141
Cow position: chr5:55965781-55965639 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 3-141
Cow position: chr5:56624404-56624259 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 135

Conread position: 3-144
Cow position: chr5:20779285-20779145 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 121

Conread position: 3-150
Cow position: chr5:45854610-45854763 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 3-153
Cow position: chr5:14000758-14000902 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 143, 25

Conread position: 3-155
Cow position: chr5:16937916-16937766 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 31

Conread position: 3-157
Cow position: chr5:49821541-49821703 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 3-158
Cow position: chr5:24108947-24108788 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 3-158
Cow position: chr5:45337308-45337149 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 16

Conread position: 4-127
Cow position: chr5:43858306-43858179 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 4-134
Cow position: chr5:44796619-44796489 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 118, 59

Conread position: 5-119
Cow position: chr5:69383370-69383482 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 5-120
Cow position: chr5:15077519-15077401 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 5-134
Cow position: chr5:18289237-18289362 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 5-137
Cow position: chr5:17254109-17253982 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 5-142
Cow position: chr5:4280563-4280699 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 110, 37

Conread position: 5-152
Cow position: chr5:58401684-58401827 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 129, 36

Conread position: 5-157
Cow position: chr5:4728189-4728343 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 36

Conread position: 7-112
Cow position: chr5:60523849-60523951 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 7-117
Cow position: chr5:55956030-55956139 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 7-133
Cow position: chr5:36038884-36038763 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 7-135
Cow position: chr5:6876849-6876720 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 106

Conread position: 7-135
Cow position: chr5:35246993-35246861 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 119

Conread position: 7-140
Cow position: chr5:12557170-12557035 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 7-140
Cow position: chr5:26549023-26548892 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 7-144
Cow position: chr5:3627062-3626924 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 10-126
Cow position: chr5:8149187-8149073 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 25-152
Cow position: chr5:51018845-51018972 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 13

Conread position: 1-128
Cow position: chr6:31928761-31928895 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 2-139
Cow position: chr6:51019274-51019415 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 3-99
Cow position: chr6:27219294-27219390 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-117
Cow position: chr6:18447391-18447273 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 3-125
Cow position: chr6:15242963-15243089 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 3-127
Cow position: chr6:67574514-67574643 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 3-128
Cow position: chr6:30688385-30688258 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 101

Conread position: 3-139
Cow position: chr6:50883549-50883416 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 3-140
Cow position: chr6:44544022-44543881 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 25

Conread position: 3-157
Cow position: chr6:54365205-54365044 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 4-132
Cow position: chr6:67810857-67810729 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 38

Conread position: 4-157
Cow position: chr6:26408377-26408219 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 5-117
Cow position: chr6:23173180-23173290 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 5-126
Cow position: chr6:34463459-34463339 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 96, 36

Conread position: 5-143
Cow position: chr6:42034900-42035039 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 5-148
Cow position: chr6:23401864-23401721 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 123, 28

Conread position: 7-118
Cow position: chr6:60673965-60674074 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 7-128
Cow position: chr6:24468265-24468146 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 7-152
Cow position: chr6:694013-693865 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 7-152
Cow position: chr6:25614960-25614810 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 9-119
Cow position: chr6:18903903-18903793 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-156
Cow position: chr6:21293364-21293219 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 35

Conread position: 22-117
Cow position: chr6:37603811-37603906 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 28-130
Cow position: chr6:18615403-18615301 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 30-129
Cow position: chr6:63233672-63233771 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-163
Cow position: chr7:14029436-14029601 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 125, 40

Conread position: 3-110
Cow position: chr7:25263497-25263607 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 60

Conread position: 3-116
Cow position: chr7:43085003-43085120 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-117
Cow position: chr7:1761860-1761975 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 3-118
Cow position: chr7:50442767-50442650 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 3-119
Cow position: chr7:32373166-32373280 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 3-120
Cow position: chr7:25860077-25859955 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 3-121
Cow position: chr7:8089294-8089409 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 3-121
Cow position: chr7:40310933-40310812 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 3-127
Cow position: chr7:30011961-30012083 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 3-133
Cow position: chr7:8387285-8387152 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 80

Conread position: 3-134
Cow position: chr7:16285449-16285319 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 113

Conread position: 3-134
Cow position: chr7:23255883-23256014 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 43

Conread position: 3-136
Cow position: chr7:59438582-59438715 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 16

Conread position: 3-137
Cow position: chr7:14496494-14496357 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 127

Conread position: 3-141
Cow position: chr7:44942686-44942827 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 3-149
Cow position: chr7:42460795-42460945 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 3-158
Cow position: chr7:40308390-40308231 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 3-160
Cow position: chr7:62953644-62953799 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 25

Conread position: 4-119
Cow position: chr7:53271141-53271254 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 5-129
Cow position: chr7:38429580-38429461 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 5-140
Cow position: chr7:40344743-40344611 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 5-141
Cow position: chr7:9068467-9068328 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 120

Conread position: 5-152
Cow position: chr7:48020559-48020702 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 5-154
Cow position: chr7:37061985-37062133 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 138, 0

Conread position: 5-156
Cow position: chr7:52591872-52591717 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 5-157
Cow position: chr7:249374-249223 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 107

Conread position: 6-139
Cow position: chr7:14498890-14498760 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 29

Conread position: 6-145
Cow position: chr7:6801913-6802050 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 7-133
Cow position: chr7:5624024-5624150 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-135
Cow position: chr7:39988867-39988996 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 7-159
Cow position: chr7:36996492-36996645 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 123

Conread position: 8-145
Cow position: chr7:23615822-23615682 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 117

Conread position: 9-134
Cow position: chr7:6044001-6043877 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 9-134
Cow position: chr7:32260060-32259936 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 91, 28

Conread position: 32-161
Cow position: chr7:58681864-58681736 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 3-115
Cow position: chr8:19784956-19785069 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 3-117
Cow position: chr8:3445996-3445884 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 3-119
Cow position: chr8:21826640-21826526 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 3-127
Cow position: chr8:31767937-31767813 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 115, 37

Conread position: 3-128
Cow position: chr8:5477753-5477632 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 3-128
Cow position: chr8:32243694-32243819 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 99

Conread position: 3-133
Cow position: chr8:41722096-41721964 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 112

Conread position: 3-134
Cow position: chr8:39968184-39968048 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 3-136
Cow position: chr8:31290651-31290787 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 3-136
Cow position: chr8:43112748-43112622 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 3-138
Cow position: chr8:20327757-20327619 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 33, 122

Conread position: 3-139
Cow position: chr8:36375418-36375287 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 3-145
Cow position: chr8:20105776-20105630 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-146
Cow position: chr8:51511759-51511615 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 32, 87

Conread position: 3-149
Cow position: chr8:31902588-31902443 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 38

Conread position: 3-157
Cow position: chr8:10832336-10832174 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 3-160
Cow position: chr8:2968674-2968840 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 5-136
Cow position: chr8:1188016-1188145 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 5-138
Cow position: chr8:35497583-35497452 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 5-161
Cow position: chr8:11555350-11555201 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 7-124
Cow position: chr8:46082270-46082384 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 7-131
Cow position: chr8:38572167-38572043 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-136
Cow position: chr8:57041529-57041400 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-143
Cow position: chr8:25640000-25639866 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 7-155
Cow position: chr8:61848625-61848475 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 7-163
Cow position: chr8:8189957-8189801 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 106

Conread position: 13-135
Cow position: chr8:38696287-38696163 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 52

Conread position: 19-143
Cow position: chr8:663550-663426 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-157
Cow position: chr8:49560528-49560388 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 22

Conread position: 3-118
Cow position: chr9:38370419-38370302 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 3-120
Cow position: chr9:55284400-55284517 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-121
Cow position: chr9:29819661-29819549 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 3-125
Cow position: chr9:34279113-34279240 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 3-127
Cow position: chr9:42497767-42497644 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 25

Conread position: 3-128
Cow position: chr9:31626076-31625947 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 3-129
Cow position: chr9:12786531-12786661 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 3-136
Cow position: chr9:50977311-50977446 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 122

Conread position: 3-139
Cow position: chr9:61019420-61019556 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 113

Conread position: 3-142
Cow position: chr9:20828848-20828707 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 88

Conread position: 3-144
Cow position: chr9:9091163-9091308 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 3-146
Cow position: chr9:26057488-26057632 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 77

Conread position: 3-146
Cow position: chr9:35932872-35933015 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 54

Conread position: 3-150
Cow position: chr9:3946206-3946353 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 132, 9

Conread position: 3-151
Cow position: chr9:4630046-4629901 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 34

Conread position: 3-156
Cow position: chr9:60741241-60741395 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 127

Conread position: 3-157
Cow position: chr9:31216022-31215861 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 25, 146

Conread position: 3-159
Cow position: chr9:39149021-39148869 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 5-118
Cow position: chr9:41282955-41282838 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 5-120
Cow position: chr9:36634447-36634328 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 5-128
Cow position: chr9:22447354-22447478 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 86

Conread position: 5-141
Cow position: chr9:54542524-54542388 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 64

Conread position: 6-135
Cow position: chr9:28747581-28747708 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 6-136
Cow position: chr9:33584746-33584875 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 6-175
Cow position: chr9:12337841-12337670 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 127

Conread position: 7-119
Cow position: chr9:9596014-9596125 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 7-121
Cow position: chr9:28726792-28726906 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-135
Cow position: chr9:12268970-12268844 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 7-136
Cow position: chr9:6192522-6192652 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 109, 12

Conread position: 7-139
Cow position: chr9:8628979-8629104 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 7-139
Cow position: chr9:34286737-34286605 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 106

Conread position: 7-140
Cow position: chr9:34399609-34399477 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 106

Conread position: 7-140
Cow position: chr9:55577646-55577516 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 7-142
Cow position: chr9:24079240-24079106 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 118, 34

Conread position: 7-149
Cow position: chr9:45141662-45141802 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 34

Conread position: 7-162
Cow position: chr9:6237555-6237711 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 34

Conread position: 9-127
Cow position: chr9:34034207-34034086 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 12-109
Cow position: chr9:12773626-12773529 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-125
Cow position: chr9:3970869-3970980 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 14-136
Cow position: chr9:26477146-26477021 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 111

Conread position: 41-160
Cow position: chr9:4268100-4268218 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 1-112
Cow position: chrX:35382925-35382816 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 1-122
Cow position: chrX:38094408-38094290 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 2-117
Cow position: chrX:10479861-10479981 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 3-115
Cow position: chrX:19356577-19356693 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 3-119
Cow position: chrX:3494933-3494817 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 101
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-119
Cow position: chrX:41166711-41166596 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 11

Conread position: 3-124
Cow position: chrX:19018717-19018590 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 3-126
Cow position: chrX:1122433-1122307 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 92

Conread position: 3-127
Cow position: chrX:36356219-36356343 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 110

Conread position: 3-128
Cow position: chrX:42247068-42246940 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 115

Conread position: 3-140
Cow position: chrX:27446800-27446935 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 3-140
Cow position: chrX:38218830-38218969 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 118, 0

Conread position: 3-140
Cow position: chrX:46909929-46910060 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 3-143
Cow position: chrX:40556344-40556207 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 51

Conread position: 3-145
Cow position: chrX:1571475-1571337 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 136, 38

Conread position: 3-145
Cow position: chrX:4559847-4559987 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 113

Conread position: 3-153
Cow position: chrX:20339780-20339630 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 83

Conread position: 3-153
Cow position: chrX:40337024-40337176 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 112

Conread position: 3-157
Cow position: chrX:35885613-35885460 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 37

Conread position: 3-163
Cow position: chrX:42875326-42875491 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 113, 0

Conread position: 4-127
Cow position: chrX:12290834-12290962 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 4-134
Cow position: chrX:46068644-46068514 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 115, 29

Conread position: 5-119
Cow position: chrX:23497575-23497464 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 5-124
Cow position: chrX:38727022-38726907 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 5-141
Cow position: chrX:38080263-38080400 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 120

Conread position: 6-134
Cow position: chrX:8759739-8759871 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 6-138
Cow position: chrX:45759788-45759923 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 6-151
Cow position: chrX:42449897-42449745 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 7-119
Cow position: chrX:28940363-28940477 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 7-123
Cow position: chrX:31279806-31279691 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 7-125
Cow position: chrX:11633800-11633919 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 107

Conread position: 7-128
Cow position: chrX:11656199-11656318 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 37

Conread position: 7-134
Cow position: chrX:40108225-40108096 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 7-140
Cow position: chrX:14135796-14135929 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 104

Conread position: 7-156
Cow position: chrX:43028350-43028500 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 146, 0

Conread position: 9-141
Cow position: chrX:27668838-27668708 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 12-127
Cow position: chrX:4399242-4399358 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 101

Conread position: 13-117
Cow position: chrX:33865173-33865066 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 13-157
Cow position: chrX:15546006-15546151 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 15

Conread position: 42-153
Cow position: chrX:25282858-25282748 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 0