Cow genome map
| Conread name: | Spl1-SPL01A080034 |
| Conread position: | 56-265 |
| Cow position: | chr10:8921167-8921381 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 73-271 |
| Cow position: | chr10:45671941-45672129 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 28-212 |
| Cow position: | chr13:41380772-41380582 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 44-266 |
| Cow position: | chr13:43709127-43709349 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 39, 144 |
| Conread position: | 50-271 |
| Cow position: | chr13:51907374-51907159 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 44-271 |
| Cow position: | chr14:36277021-36277235 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 39, 62 |
| Conread position: | 44-210 |
| Cow position: | chr15:32434115-32433946 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 145 |
| Conread position: | 28-183 |
| Cow position: | chr16:404887-405045 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 114 |
| Conread position: | 44-261 |
| Cow position: | chr16:2247116-2247323 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 155, 118 |
| Conread position: | 44-271 |
| Cow position: | chr16:3150142-3149918 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 155 |
| Conread position: | 50-270 |
| Cow position: | chr16:50514621-50514845 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 96-270 |
| Cow position: | chr16:52505176-52505353 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 33-267 |
| Cow position: | chr17:34289734-34289502 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 51, 9 |
| Conread position: | 118-503 |
| Cow position: | chr18:42509070-42508708 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 46-234 |
| Cow position: | chr2:57681282-57681090 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 34, 143 |
| Conread position: | 52-183 |
| Cow position: | chr2:35974579-35974448 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 1-314 |
| Cow position: | chr20:18995574-18995281 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 25-265 |
| Cow position: | chr21:49707270-49707026 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 111 |
| Conread position: | 39-271 |
| Cow position: | chr21:11018445-11018673 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 44-354 |
| Cow position: | chr22:45893389-45893097 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 182, 56 |
| Conread position: | 53-265 |
| Cow position: | chr22:14239745-14239542 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 42-209 |
| Cow position: | chr23:12973973-12973804 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 28-265 |
| Cow position: | chr24:6077125-6077354 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 159 |
| Conread position: | 44-347 |
| Cow position: | chr24:7780020-7779729 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 303-537 |
| Cow position: | chr24:37145714-37145484 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 44-213 |
| Cow position: | chr25:14514919-14514744 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-210 |
| Cow position: | chr26:10987731-10987506 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 47-271 |
| Cow position: | chr26:6565725-6565944 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 45-257 |
| Cow position: | chr29:28333884-28333682 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 43, 83 |
| Conread position: | 44-265 |
| Cow position: | chr3:48243210-48243416 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 110 |
| Conread position: | 45-304 |
| Cow position: | chr3:11250171-11250423 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 149 |
| Conread position: | 28-271 |
| Cow position: | chr4:57720432-57720195 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 113 |
| Conread position: | 230-566 |
| Cow position: | chr4:64716687-64717017 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 30-567 |
| Cow position: | chr6:50307727-50307195 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 174 |
| Conread position: | 44-267 |
| Cow position: | chr7:41119367-41119149 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 85 |
| Conread position: | 314-566 |
| Cow position: | chr7:59740756-59741001 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 44-155 |
| Cow position: | chr8:3842539-3842428 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-271 |
| Cow position: | chr8:37097590-37097374 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 55-254 |
| Cow position: | chr8:2893436-2893240 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 134 |
| Conread position: | 9-190 |
| Cow position: | chr9:40071889-40071710 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 46-264 |
| Cow position: | chr9:24676060-24676281 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 371-554 |
| Cow position: | chr9:40069065-40068883 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 44-265 |
| Cow position: | chrX:34657493-34657280 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 117 |