Cow genome map
| Conread name: | Spl1-SPL01B100049 |
| Conread position: | 10-655 |
| Cow position: | chr10:39849609-39848956 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 18-654 |
| Cow position: | chr10:55010435-55011072 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 171 |
| Conread position: | 42-656 |
| Cow position: | chr10:20381345-20380720 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 399 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 12, 153 |
| Conread position: | 117-634 |
| Cow position: | chr10:39876715-39876200 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 332 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 2-634 |
| Cow position: | chr11:52563900-52564531 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 63 |
| Conread position: | 3-306 |
| Cow position: | chr11:17766722-17766414 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 77 |
| Conread position: | 3-622 |
| Cow position: | chr11:15250574-15249972 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 105 |
| Conread position: | 9-415 |
| Cow position: | chr11:15994414-15994839 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 13 |
| Conread position: | 9-654 |
| Cow position: | chr11:49172249-49171594 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 319 |
| Conread position: | 72-656 |
| Cow position: | chr11:11591310-11591883 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 206 |
| Conread position: | 148-656 |
| Cow position: | chr12:30686431-30686931 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 77, 81 |
| Conread position: | 60-656 |
| Cow position: | chr14:38915830-38915230 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 382 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 10, 262 |
| Conread position: | 126-655 |
| Cow position: | chr14:50144558-50145076 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 327-692 |
| Cow position: | chr15:33747138-33747489 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 2-569 |
| Cow position: | chr16:37057196-37056632 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 4-444 |
| Cow position: | chr16:38533301-38532851 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 299 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 44-656 |
| Cow position: | chr16:43045-43669 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 404 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 72-656 |
| Cow position: | chr16:23985237-23985820 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 370 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 210 |
| Conread position: | 148-655 |
| Cow position: | chr16:53990971-53991459 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 87, 127 |
| Conread position: | 115-538 |
| Cow position: | chr17:13920933-13920517 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 159 |
| Conread position: | 2-744 |
| Cow position: | chr18:39411476-39412223 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 68 |
| Conread position: | 4-646 |
| Cow position: | chr18:37540343-37540994 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 172 |
| Conread position: | 11-314 |
| Cow position: | chr18:28211149-28210825 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 230 |
| Conread position: | 237-607 |
| Cow position: | chr18:36605325-36605681 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 9-659 |
| Cow position: | chr19:2261784-2261144 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 15 |
| Conread position: | 120-524 |
| Cow position: | chr19:42256677-42256273 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 9, 194 |
| Conread position: | 148-656 |
| Cow position: | chr19:39750016-39750514 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 167 |
| Conread position: | 9-571 |
| Cow position: | chr20:12693647-12694214 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 367 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 114-659 |
| Cow position: | chr20:28035130-28034603 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 355 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 30, 153 |
| Conread position: | 28-309 |
| Cow position: | chr21:15924926-15925212 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 28 |
| Conread position: | 309-749 |
| Cow position: | chr21:46987238-46986817 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 291 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 368, 44 |
| Conread position: | 2-635 |
| Cow position: | chr22:11348035-11348665 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 279 |
| Conread position: | 10-656 |
| Cow position: | chr22:6499147-6498505 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 303 |
| Conread position: | 112-526 |
| Cow position: | chr22:27534984-27534563 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 275 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 148-656 |
| Cow position: | chr22:7155355-7155854 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 328 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 87, 126 |
| Conread position: | 9-654 |
| Cow position: | chr23:21773375-21772723 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 284 |
| Conread position: | 372-752 |
| Cow position: | chr24:16298168-16297803 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 267 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 9-309 |
| Cow position: | chr25:34675627-34675939 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 60, 76 |
| Conread position: | 11-656 |
| Cow position: | chr25:11042949-11043600 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 279 |
| Conread position: | 151-656 |
| Cow position: | chr25:27019755-27019258 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 89 |
| Conread position: | 523-751 |
| Cow position: | chr25:9979968-9979732 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 9-656 |
| Cow position: | chr28:30534480-30533821 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 284 |
| Conread position: | 243-751 |
| Cow position: | chr28:16041820-16041312 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 68 |
| Conread position: | 9-653 |
| Cow position: | chr29:32542689-32543342 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 209 |
| Conread position: | 148-655 |
| Cow position: | chr29:2745789-2745296 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 128 |
| Conread position: | 3-752 |
| Cow position: | chr9:20505590-20506311 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 80 |
| Conread position: | 10-659 |
| Cow position: | chr9:4306626-4305980 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 408 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 11-646 |
| Cow position: | chr9:31113597-31114231 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 416 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 46, 316 |
| Conread position: | 84-751 |
| Cow position: | chr9:48851659-48850987 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 263 |
| Conread position: | 148-656 |
| Cow position: | chr9:47170640-47171147 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 129 |
| Conread position: | 480-670 |
| Cow position: | chr9:7458807-7458617 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 9-656 |
| Cow position: | chrX:26442900-26442248 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 210 |
| Conread position: | 9-658 |
| Cow position: | chrX:14782998-14782341 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 281 |
| Conread position: | 11-656 |
| Cow position: | chrX:39697118-39697768 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 415 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 43-654 |
| Cow position: | chrX:25450728-25451336 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 18 |