Cow genome map

Conread name: Spl1-SPL01C060046

Conread position: 1-210
Cow position: chr1:89809804-89809599 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-276
Cow position: chr1:40513681-40513413 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-286
Cow position: chr1:62805990-62805707 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-380
Cow position: chr1:25549879-25550249 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-456
Cow position: chr1:102549046-102549513 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 32

Conread position: 1-465
Cow position: chr1:55775970-55776413 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-470
Cow position: chr1:52359460-52358996 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-476
Cow position: chr1:72187055-72186590 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-479
Cow position: chr1:63605967-63605490 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 471, 85

Conread position: 1-480
Cow position: chr1:58335652-58336127 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 471, 32

Conread position: 1-483
Cow position: chr1:3386190-3385726 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-483
Cow position: chr1:25180215-25179736 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr1:28872893-28873368 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr1:49974375-49973896 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr1:56194115-56193637 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr1:67286306-67286780 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 30

Conread position: 1-483
Cow position: chr1:68607732-68607249 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 32

Conread position: 1-483
Cow position: chr1:76545724-76545245 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 24

Conread position: 1-483
Cow position: chr1:76623129-76622663 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-483
Cow position: chr1:78289697-78290158 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr1:79457151-79456678 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr1:85780962-85780486 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 32

Conread position: 1-483
Cow position: chr1:86699402-86698923 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-483
Cow position: chr1:102435212-102434745 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 33

Conread position: 1-485
Cow position: chr1:69402808-69403276 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-489
Cow position: chr1:79335988-79335504 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-503
Cow position: chr1:8824878-8825364 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-503
Cow position: chr1:13645547-13646026 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr1:28801610-28801086 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 86

Conread position: 1-503
Cow position: chr1:40307883-40308372 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 24

Conread position: 1-503
Cow position: chr1:72656798-72657301 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 29

Conread position: 1-503
Cow position: chr1:87244615-87245125 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 25

Conread position: 1-503
Cow position: chr1:88635191-88635685 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-503
Cow position: chr1:89899886-89899391 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 27

Conread position: 1-503
Cow position: chr1:97123648-97124122 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 415, 27

Conread position: 1-503
Cow position: chr1:97226884-97226397 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-504
Cow position: chr1:69766280-69766782 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 32

Conread position: 1-507
Cow position: chr1:18244573-18244065 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 31

Conread position: 1-510
Cow position: chr1:56144514-56144017 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 32

Conread position: 1-511
Cow position: chr1:52918800-52918306 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 16

Conread position: 1-526
Cow position: chr1:91893295-91892786 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-537
Cow position: chr1:57367316-57366785 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 495, 34

Conread position: 1-537
Cow position: chr1:57567766-57568300 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-541
Cow position: chr1:82564320-82564860 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 32

Conread position: 1-553
Cow position: chr1:34689158-34689706 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 30

Conread position: 1-563
Cow position: chr1:45097524-45098076 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 454, 27

Conread position: 1-586
Cow position: chr1:31330968-31330394 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 22

Conread position: 1-612
Cow position: chr1:72136459-72137060 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 19

Conread position: 1-616
Cow position: chr1:5318576-5319168 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-283
Cow position: chr1:17941994-17941715 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 31, 0

Conread position: 2-503
Cow position: chr1:1461510-1461018 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-503
Cow position: chr1:72080589-72081093 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 31

Conread position: 2-503
Cow position: chr1:82918841-82918350 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 2-561
Cow position: chr1:31366260-31365709 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 499, 31

Conread position: 2-593
Cow position: chr1:13879952-13880520 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 28

Conread position: 3-503
Cow position: chr1:89770864-89770370 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-162
Cow position: chr1:31396236-31396388 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 5-163
Cow position: chr1:43019945-43020099 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 5-185
Cow position: chr1:85881562-85881741 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 156, 28

Conread position: 5-197
Cow position: chr1:22864098-22863908 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 5-207
Cow position: chr1:13253615-13253418 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 5-371
Cow position: chr1:79920907-79920544 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-428
Cow position: chr1:33895499-33895920 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 28

Conread position: 5-480
Cow position: chr1:55276666-55276193 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position: chr1:33550743-33551212 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 26

Conread position: 5-483
Cow position: chr1:88130578-88131065 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 28

Conread position: 5-486
Cow position: chr1:56489659-56490138 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 28

Conread position: 5-488
Cow position: chr1:40684870-40684391 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr1:59210314-59209838 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-496
Cow position: chr1:42290212-42290691 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 83

Conread position: 5-496
Cow position: chr1:101858163-101857678 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 21

Conread position: 5-502
Cow position: chr1:8554148-8554642 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr1:17012916-17012425 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 28

Conread position: 5-502
Cow position: chr1:18880565-18880079 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr1:61308822-61309317 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-502
Cow position: chr1:86548311-86547821 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-503
Cow position: chr1:38414627-38415112 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 5-503
Cow position: chr1:71562755-71562259 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 16

Conread position: 5-541
Cow position: chr1:11292284-11291749 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 28

Conread position: 5-541
Cow position: chr1:21087236-21087770 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 16

Conread position: 5-541
Cow position: chr1:28710736-28711273 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr1:33851099-33851634 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 28

Conread position: 5-541
Cow position: chr1:40053175-40053712 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr1:80359346-80358824 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 16

Conread position: 5-542
Cow position: chr1:39543591-39544127 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 493, 28

Conread position: 6-372
Cow position: chr1:15347764-15347400 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 6-496
Cow position: chr1:52233290-52232807 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 484, 24

Conread position: 6-502
Cow position: chr1:62925434-62925927 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 6-587
Cow position: chr1:30027720-30027152 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 24

Conread position: 7-503
Cow position: chr1:33711882-33712378 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 81

Conread position: 7-526
Cow position: chr1:22000134-21999620 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 9-576
Cow position: chr1:11863412-11862873 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 509, 25

Conread position: 12-501
Cow position: chr1:59644681-59645148 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 310
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 8, 24

Conread position: 13-485
Cow position: chr1:67835310-67834843 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 14-224
Cow position: chr1:79885003-79884794 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 74

Conread position: 14-412
Cow position: chr1:37419916-37419530 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 14

Conread position: 15-476
Cow position: chr1:89740413-89739982 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 13

Conread position: 15-504
Cow position: chr1:13450040-13450526 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 476, 18

Conread position: 18-263
Cow position: chr1:6708261-6708019 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 18-470
Cow position: chr1:99910784-99911240 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 13

Conread position: 18-541
Cow position: chr1:30283706-30283186 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 34

Conread position: 18-541
Cow position: chr1:80556222-80555731 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 330
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 485, 12

Conread position: 18-581
Cow position: chr1:54365988-54365439 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 482, 12

Conread position: 21-501
Cow position: chr1:76752820-76752340 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 67

Conread position: 21-503
Cow position: chr1:69536740-69537211 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 21-571
Cow position: chr1:98661461-98660933 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 44

Conread position: 24-503
Cow position: chr1:101149673-101150147 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 28-551
Cow position: chr1:57656393-57656909 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 489, 7

Conread position: 29-195
Cow position: chr1:38387800-38387643 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 29-480
Cow position: chr1:12062351-12061905 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 31-503
Cow position: chr1:87207572-87207114 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 31-558
Cow position: chr1:62853997-62853473 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 419, 55

Conread position: 44-470
Cow position: chr1:48245669-48246095 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 39

Conread position: 57-526
Cow position: chr1:73071186-73070719 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 92-489
Cow position: chr1:60339210-60339606 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 93-503
Cow position: chr1:28722778-28723190 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 247

Conread position: 95-548
Cow position: chr1:29362204-29362659 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 245

Conread position: 113-593
Cow position: chr1:67901992-67901513 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 39

Conread position: 114-585
Cow position: chr1:89479248-89479707 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 93

Conread position: 133-483
Cow position: chr1:58884122-58883773 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 141-435
Cow position: chr1:85672063-85671768 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 195
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 188

Conread position: 149-503
Cow position: chr1:99349073-99348723 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 175-699
Cow position: chr1:55323067-55322549 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 496, 30

Conread position: 181-585
Cow position: chr1:78360739-78361133 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 264
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 363, 39

Conread position: 209-500
Cow position: chr1:77655719-77656005 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 63

Conread position: 231-523
Cow position: chr1:102556098-102556381 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 64, 0

Conread position: 273-541
Cow position: chr1:44138259-44137996 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 230, 22

Conread position: 292-750
Cow position: chr1:24650861-24651318 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 60

Conread position: 302-806
Cow position: chr1:40513264-40512762 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 46

Conread position: 322-806
Cow position: chr1:94253052-94253534 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 26

Conread position: 326-805
Cow position: chr1:21720027-21720498 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 24

Conread position: 342-545
Cow position: chr1:72039195-72038992 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 343-503
Cow position: chr1:18027615-18027455 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 343-742
Cow position: chr1:42870088-42869685 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 158

Conread position: 352-503
Cow position: chr1:87516120-87515969 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 128
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 409-523
Cow position: chr1:37419552-37419443 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 435-586
Cow position: chr1:58179897-58179747 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 438-693
Cow position: chr1:38387458-38387214 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 121, 0

Conread position: 451-593
Cow position: chr1:31418696-31418555 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 16

Conread position: 510-806
Cow position: chr1:67286827-67287118 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 136

Conread position: 1-184
Cow position: chr10:10581513-10581693 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 1-197
Cow position: chr10:13366013-13365817 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 86

Conread position: 1-313
Cow position: chr10:60489506-60489803 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-393
Cow position: chr10:276433-276817 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-422
Cow position: chr10:19143499-19143081 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 32

Conread position: 1-427
Cow position: chr10:29633019-29632601 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-478
Cow position: chr10:7282843-7282374 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr10:124149-124628 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr10:1375376-1375851 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 410, 32

Conread position: 1-483
Cow position: chr10:8289823-8290296 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr10:19511445-19511924 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr10:22101081-22101548 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr10:25359239-25359717 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr10:62409012-62408539 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chr10:25498195-25498690 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position: chr10:62216446-62216945 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 29

Conread position: 1-503
Cow position: chr10:62778183-62778686 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 1-510
Cow position: chr10:34685735-34686239 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 29

Conread position: 1-526
Cow position: chr10:21486756-21487276 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr10:32650572-32651094 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-570
Cow position: chr10:184105-184676 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 20

Conread position: 1-586
Cow position: chr10:63841153-63841726 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 30

Conread position: 1-587
Cow position: chr10:24299012-24298436 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 497, 27

Conread position: 1-593
Cow position: chr10:14859817-14860393 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 29

Conread position: 2-503
Cow position: chr10:29696082-29696569 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-241
Cow position: chr10:65307967-65308201 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 5-288
Cow position: chr10:29846766-29846485 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-371
Cow position: chr10:54059508-54059150 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-462
Cow position: chr10:38538650-38538196 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 8

Conread position: 5-496
Cow position: chr10:32578147-32578620 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 28

Conread position: 5-504
Cow position: chr10:21400828-21400328 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-504
Cow position: chr10:25565402-25564915 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-504
Cow position: chr10:41566954-41567445 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 16

Conread position: 5-504
Cow position: chr10:41876762-41877261 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr10:11685820-11685293 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 26

Conread position: 5-541
Cow position: chr10:14803678-14804216 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 28

Conread position: 5-541
Cow position: chr10:39179627-39180163 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 28

Conread position: 5-541
Cow position: chr10:39817506-39816983 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr10:41157294-41157827 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 8-502
Cow position: chr10:10478297-10477798 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 22

Conread position: 10-541
Cow position: chr10:19496429-19495906 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 23

Conread position: 14-806
Cow position: chr10:38546370-38545590 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 16

Conread position: 15-483
Cow position: chr10:2123410-2122944 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 28

Conread position: 15-583
Cow position: chr10:44294697-44295253 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 13

Conread position: 17-456
Cow position: chr10:39904779-39905232 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 71

Conread position: 18-486
Cow position: chr10:47906634-47907099 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 15

Conread position: 18-489
Cow position: chr10:21740895-21740428 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 22-499
Cow position: chr10:46694518-46694044 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 8

Conread position: 23-504
Cow position: chr10:4192358-4191883 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 65

Conread position: 28-586
Cow position: chr10:38847235-38847764 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 55

Conread position: 32-593
Cow position: chr10:15862265-15861705 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 498, 56

Conread position: 39-593
Cow position: chr10:46191244-46191781 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 482, 49

Conread position: 43-503
Cow position: chr10:39854134-39853672 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 43

Conread position: 57-532
Cow position: chr10:14951795-14952236 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 323
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 211, 10

Conread position: 65-483
Cow position: chr10:16925437-16925853 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 21

Conread position: 125-503
Cow position: chr10:40152496-40152116 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 185

Conread position: 141-366
Cow position: chr10:54979903-54979682 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 78, 39

Conread position: 147-587
Cow position: chr10:49310489-49310909 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 65

Conread position: 202-595
Cow position: chr10:33346639-33347029 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 229-593
Cow position: chr10:8328209-8327846 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 181

Conread position: 273-806
Cow position: chr10:42628732-42629260 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 75

Conread position: 278-806
Cow position: chr10:31523913-31524416 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 73

Conread position: 289-567
Cow position: chr10:60192256-60192534 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 151, 61

Conread position: 335-586
Cow position: chr10:22842921-22843172 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 197, 13

Conread position: 356-656
Cow position: chr10:54979280-54978982 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 123

Conread position: 391-544
Cow position: chr10:42679599-42679754 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 396-503
Cow position: chr10:24061575-24061468 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 408-606
Cow position: chr10:28931570-28931370 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 30

Conread position: 421-593
Cow position: chr10:60489850-60490022 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 109, 38

Conread position: 437-693
Cow position: chr10:8339168-8339423 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 33

Conread position: 591-803
Cow position: chr10:28931299-28931087 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 46

Conread position: 591-806
Cow position: chr10:33347113-33347333 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 673-806
Cow position: chr10:13364341-13364210 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 673-806
Cow position: chr10:13365531-13365400 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 1-203
Cow position: chr11:11126397-11126592 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 191, 11

Conread position: 1-255
Cow position: chr11:77235239-77235495 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 32, 88

Conread position: 1-380
Cow position: chr11:15998376-15998746 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-445
Cow position: chr11:44861047-44860611 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-455
Cow position: chr11:30125769-30125335 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-478
Cow position: chr11:77729048-77728569 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 32

Conread position: 1-479
Cow position: chr11:58133850-58134340 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 24

Conread position: 1-481
Cow position: chr11:19103008-19102532 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-482
Cow position: chr11:12358944-12358470 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr11:4271389-4270905 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 430, 24

Conread position: 1-483
Cow position: chr11:37093584-37093106 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-485
Cow position: chr11:85394331-85393853 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-486
Cow position: chr11:7113079-7113553 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 29

Conread position: 1-489
Cow position: chr11:29669151-29668669 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-499
Cow position: chr11:28063168-28063648 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 27

Conread position: 1-503
Cow position: chr11:8887672-8887182 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr11:21466554-21467053 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-525
Cow position: chr11:12351585-12351064 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 32

Conread position: 1-526
Cow position: chr11:10846922-10847441 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr11:71329122-71329643 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-570
Cow position: chr11:29234167-29233622 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 30

Conread position: 2-503
Cow position: chr11:75919900-75920378 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 2-544
Cow position: chr11:17220733-17220198 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 89

Conread position: 5-253
Cow position: chr11:9736470-9736225 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 124, 29

Conread position: 5-442
Cow position: chr11:10210481-10210048 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 22

Conread position: 5-482
Cow position: chr11:26125446-26124976 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 12

Conread position: 5-483
Cow position: chr11:44157751-44157297 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 5-489
Cow position: chr11:53287973-53287494 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr11:57628565-57628084 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-499
Cow position: chr11:8262214-8261732 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 5-502
Cow position: chr11:9607093-9606603 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 28

Conread position: 5-502
Cow position: chr11:20921264-20920770 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr11:36744696-36744205 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-502
Cow position: chr11:44895535-44895029 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 335
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 191, 25

Conread position: 5-504
Cow position: chr11:28230267-28229776 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 28

Conread position: 5-504
Cow position: chr11:67449979-67450479 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 28

Conread position: 5-526
Cow position: chr11:38835935-38835432 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 29

Conread position: 5-541
Cow position: chr11:17108204-17107668 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr11:19064768-19064231 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 28

Conread position: 5-541
Cow position: chr11:32450349-32450885 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr11:52418873-52419406 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 16

Conread position: 5-541
Cow position: chr11:67847086-67846553 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 10-504
Cow position: chr11:15983110-15983605 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 481, 23

Conread position: 14-503
Cow position: chr11:45110851-45111345 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 14

Conread position: 15-489
Cow position: chr11:63660090-63659626 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 17-503
Cow position: chr11:37492155-37491670 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 13

Conread position: 18-456
Cow position: chr11:44496103-44495666 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 18-486
Cow position: chr11:4041569-4041117 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 21-177
Cow position: chr11:17280745-17280593 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 67

Conread position: 21-461
Cow position: chr11:9157929-9157499 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 21-503
Cow position: chr11:9659902-9659411 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 67

Conread position: 21-504
Cow position: chr11:34020400-34020867 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 61

Conread position: 24-504
Cow position: chr11:25527072-25527537 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 64

Conread position: 28-496
Cow position: chr11:54209122-54209582 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 59

Conread position: 32-693
Cow position: chr11:8282586-8283233 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 57

Conread position: 60-800
Cow position: chr11:10089871-10090614 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 26

Conread position: 84-532
Cow position: chr11:66726024-66726476 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 130

Conread position: 93-255
Cow position: chr11:46962849-46962692 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 113-489
Cow position: chr11:5343630-5343255 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 0

Conread position: 113-503
Cow position: chr11:37065536-37065142 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 115

Conread position: 144-397
Cow position: chr11:32684907-32685154 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 43, 0

Conread position: 226-509
Cow position: chr11:48084813-48085092 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 184, 122

Conread position: 289-556
Cow position: chr11:4065471-4065199 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 310-499
Cow position: chr11:9220336-9220147 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 43

Conread position: 321-747
Cow position: chr11:7316668-7317092 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 27

Conread position: 336-586
Cow position: chr11:59433358-59433101 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 100

Conread position: 379-499
Cow position: chr11:59369460-59369580 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 389-503
Cow position: chr11:8267680-8267566 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 404-579
Cow position: chr11:10050589-10050764 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 114, 15

Conread position: 460-653
Cow position: chr11:30125106-30124909 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 475-806
Cow position: chr11:7113836-7114152 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 197, 18

Conread position: 1-483
Cow position: chr12:8678354-8677878 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 20

Conread position: 1-483
Cow position: chr12:11098006-11098485 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 32

Conread position: 1-483
Cow position: chr12:14662846-14662390 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 32

Conread position: 1-483
Cow position: chr12:27933181-27932702 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-496
Cow position: chr12:21254891-21254399 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 32

Conread position: 1-497
Cow position: chr12:2563-3056 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 430, 29

Conread position: 1-503
Cow position: chr12:2282311-2282809 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-503
Cow position: chr12:21901711-21902202 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 29

Conread position: 1-503
Cow position: chr12:45261379-45261886 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 27

Conread position: 1-532
Cow position: chr12:28766252-28765727 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 32

Conread position: 2-490
Cow position: chr12:20998354-20997883 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 3-503
Cow position: chr12:22332388-22332887 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 30

Conread position: 4-483
Cow position: chr12:22205979-22205505 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 5-409
Cow position: chr12:26141582-26141983 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-503
Cow position: chr12:8310954-8311444 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 5-541
Cow position: chr12:21426465-21426999 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 16

Conread position: 5-593
Cow position: chr12:21499887-21500452 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 25

Conread position: 14-503
Cow position: chr12:26947202-26946727 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 14

Conread position: 17-504
Cow position: chr12:32653325-32653812 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 474, 17

Conread position: 18-185
Cow position: chr12:42420342-42420176 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 14, 70

Conread position: 18-504
Cow position: chr12:37558338-37558824 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 15

Conread position: 21-184
Cow position: chr12:21197611-21197772 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 22-753
Cow position: chr12:15951475-15950759 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 61

Conread position: 28-454
Cow position: chr12:17975340-17975751 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 280
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 24, 50

Conread position: 190-526
Cow position: chr12:2838903-2838575 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 300-496
Cow position: chr12:23240065-23240260 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 192, 41

Conread position: 382-503
Cow position: chr12:31544920-31545041 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 416-569
Cow position: chr12:48405430-48405577 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 8

Conread position: 1-190
Cow position: chr13:4482020-4482201 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 1-260
Cow position: chr13:32544491-32544742 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 251, 32

Conread position: 1-293
Cow position: chr13:34868313-34868606 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 34

Conread position: 1-362
Cow position: chr13:2232203-2232562 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-482
Cow position: chr13:2908900-2908428 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 437, 30

Conread position: 1-483
Cow position: chr13:9044054-9044522 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 32

Conread position: 1-483
Cow position: chr13:15924839-15924362 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr13:34042821-34042347 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-485
Cow position: chr13:32738275-32737798 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 1-497
Cow position: chr13:34911822-34911343 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-499
Cow position: chr13:34187144-34186649 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 29

Conread position: 1-503
Cow position: chr13:30657417-30656935 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-503
Cow position: chr13:33825184-33824693 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 27

Conread position: 1-503
Cow position: chr13:33928015-33927545 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr13:34692706-34693207 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 29

Conread position: 1-503
Cow position: chr13:56730735-56730245 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 30

Conread position: 1-504
Cow position: chr13:15520970-15520472 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr13:31612792-31612271 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 32

Conread position: 1-806
Cow position: chr13:34936682-34937500 (view UCSC Genome Browser custom track)
Alignm length: 827
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 88

Conread position: 2-478
Cow position: chr13:6668579-6668106 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-524
Cow position: chr13:34326131-34325611 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 17

Conread position: 5-171
Cow position: chr13:3058445-3058281 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 26

Conread position: 5-414
Cow position: chr13:30245186-30244780 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr13:50109014-50109490 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-504
Cow position: chr13:2297251-2296764 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-505
Cow position: chr13:21840647-21840147 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 28

Conread position: 6-483
Cow position: chr13:35756789-35757263 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 7-452
Cow position: chr13:23003966-23003527 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 7-503
Cow position: chr13:3276707-3277196 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 21-501
Cow position: chr13:22186161-22185699 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 63

Conread position: 21-541
Cow position: chr13:13324315-13324833 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 10

Conread position: 23-799
Cow position: chr13:20542800-20542039 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 594
Alignm E-value: 0
Alignm gaps (pig, cow): 648, 56

Conread position: 28-500
Cow position: chr13:31832171-31832636 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 31-799
Cow position: chr13:54284155-54284910 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 55

Conread position: 37-574
Cow position: chr13:30063712-30064225 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 51

Conread position: 113-585
Cow position: chr13:34767622-34767175 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 125-489
Cow position: chr13:2389157-2388790 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 219

Conread position: 133-578
Cow position: chr13:11764560-11764140 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 295
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 187, 51

Conread position: 225-564
Cow position: chr13:4178886-4178543 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 123

Conread position: 288-503
Cow position: chr13:32524979-32524754 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 19

Conread position: 326-501
Cow position: chr13:34868606-34868783 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 147
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 23, 92

Conread position: 328-585
Cow position: chr13:34111163-34111407 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 194, 20

Conread position: 370-806
Cow position: chr13:15451647-15451221 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 112

Conread position: 462-806
Cow position: chr13:26843794-26844118 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 234, 38

Conread position: 591-796
Cow position: chr13:11064605-11064398 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 1-235
Cow position: chr14:45160285-45160519 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 185, 27

Conread position: 1-483
Cow position: chr14:13302451-13302926 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 32

Conread position: 1-483
Cow position: chr14:17684815-17685295 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 32

Conread position: 1-483
Cow position: chr14:20781876-20782354 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr14:22032262-22031789 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-489
Cow position: chr14:19328846-19328364 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-497
Cow position: chr14:38532878-38532380 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 88

Conread position: 1-497
Cow position: chr14:44421978-44422466 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 1-500
Cow position: chr14:45850648-45851137 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-502
Cow position: chr14:17001635-17001142 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chr14:7831119-7830622 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 1-503
Cow position: chr14:13660567-13660068 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 446, 29

Conread position: 1-503
Cow position: chr14:23690804-23690311 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 27

Conread position: 1-503
Cow position: chr14:36967679-36968173 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr14:37223322-37223819 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-503
Cow position: chr14:45205493-45205995 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 24

Conread position: 1-503
Cow position: chr14:45712555-45712073 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-503
Cow position: chr14:45767426-45767920 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-504
Cow position: chr14:44856005-44855508 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 29

Conread position: 1-510
Cow position: chr14:28994435-28993929 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-523
Cow position: chr14:44225834-44226335 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 1-536
Cow position: chr14:44376856-44377389 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 30

Conread position: 1-581
Cow position: chr14:47589293-47589860 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 88

Conread position: 1-806
Cow position: chr14:40339130-40339890 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 472, 20

Conread position: 1-806
Cow position: chr14:46084045-46084838 (view UCSC Genome Browser custom track)
Alignm length: 816
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 525, 42

Conread position: 2-378
Cow position: chr14:45079955-45080313 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-483
Cow position: chr14:44685469-44685941 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-497
Cow position: chr14:42151745-42152236 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 28

Conread position: 5-485
Cow position: chr14:13272682-13273147 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr14:45029689-45029220 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 5-503
Cow position: chr14:45916824-45917336 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 28

Conread position: 5-537
Cow position: chr14:30585512-30584996 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 488, 28

Conread position: 5-541
Cow position: chr14:33394352-33393819 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr14:45672621-45672085 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-568
Cow position: chr14:23901377-23900817 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-756
Cow position: chr14:35387706-35386982 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 26

Conread position: 6-485
Cow position: chr14:2283764-2284239 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 6-489
Cow position: chr14:9044990-9045470 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 27

Conread position: 6-593
Cow position: chr14:22018830-22019398 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 19

Conread position: 6-716
Cow position: chr14:45303935-45303234 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 485, 22

Conread position: 8-526
Cow position: chr14:48254885-48254364 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 25

Conread position: 14-199
Cow position: chr14:1500460-1500645 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 17, 75

Conread position: 14-503
Cow position: chr14:46464503-46464990 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 17

Conread position: 18-423
Cow position: chr14:41755298-41755682 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 15

Conread position: 18-504
Cow position: chr14:29048464-29047980 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 15

Conread position: 18-538
Cow position: chr14:45833598-45834109 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 16

Conread position: 18-572
Cow position: chr14:35928612-35929162 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 69

Conread position: 19-569
Cow position: chr14:16845883-16846421 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 12

Conread position: 21-483
Cow position: chr14:5528501-5528960 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 28-499
Cow position: chr14:44130366-44130827 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 29-593
Cow position: chr14:12608655-12609189 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 66

Conread position: 43-559
Cow position: chr14:31887139-31887656 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 437, 45

Conread position: 44-503
Cow position: chr14:30596916-30596466 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 15

Conread position: 58-574
Cow position: chr14:14309598-14309073 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 45

Conread position: 69-503
Cow position: chr14:41085296-41084861 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 18

Conread position: 84-483
Cow position: chr14:13864581-13864184 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 16

Conread position: 106-573
Cow position: chr14:9102571-9102134 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 59

Conread position: 114-585
Cow position: chr14:41407352-41407817 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 422, 233

Conread position: 132-585
Cow position: chr14:37414340-37413896 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 220

Conread position: 136-497
Cow position: chr14:13480175-13479822 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 192-483
Cow position: chr14:44287642-44287352 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 238-573
Cow position: chr14:38146238-38146565 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 110

Conread position: 253-503
Cow position: chr14:45771105-45770861 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 289-598
Cow position: chr14:33675517-33675826 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 5

Conread position: 334-587
Cow position: chr14:45235755-45236007 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 73

Conread position: 343-574
Cow position: chr14:33235722-33235955 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 116, 122

Conread position: 519-806
Cow position: chr14:17764877-17764573 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 85, 288

Conread position: 572-806
Cow position: chr14:44377466-44377699 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 100, 189

Conread position: 591-806
Cow position: chr14:33675909-33676114 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 102

Conread position: 1-219
Cow position: chr15:10787670-10787460 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 125, 16

Conread position: 1-226
Cow position: chr15:6371418-6371206 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1-315
Cow position: chr15:55622-55934 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 33

Conread position: 1-368
Cow position: chr15:21816326-21815960 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 29

Conread position: 1-456
Cow position: chr15:3261983-3261543 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 41

Conread position: 1-481
Cow position: chr15:12421742-12421268 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-483
Cow position: chr15:7836663-7837143 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 34

Conread position: 1-483
Cow position: chr15:17039830-17039358 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-483
Cow position: chr15:42936135-42936613 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-489
Cow position: chr15:4677917-4678382 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 30

Conread position: 1-489
Cow position: chr15:19738628-19738148 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 20

Conread position: 1-490
Cow position: chr15:3038099-3037605 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 95

Conread position: 1-490
Cow position: chr15:8098910-8099394 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 36

Conread position: 1-502
Cow position: chr15:4630487-4630001 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-502
Cow position: chr15:4670841-4671347 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 18

Conread position: 1-503
Cow position: chr15:690216-690709 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 37

Conread position: 1-503
Cow position: chr15:2076077-2076567 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 41

Conread position: 1-503
Cow position: chr15:4649258-4649746 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-503
Cow position: chr15:4733283-4733778 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr15:6277834-6277340 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 84

Conread position: 1-503
Cow position: chr15:7523083-7522574 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 29

Conread position: 1-503
Cow position: chr15:7544301-7544801 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr15:17291877-17292359 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 32

Conread position: 1-503
Cow position: chr15:18576145-18576633 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chr15:21960934-21961427 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr15:35747717-35748213 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 90

Conread position: 1-503
Cow position: chr15:36648335-36648827 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-504
Cow position: chr15:4170270-4169778 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 27

Conread position: 1-523
Cow position: chr15:41365604-41366115 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 511, 29

Conread position: 1-525
Cow position: chr15:1763513-1764033 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 1-525
Cow position: chr15:6078153-6078684 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 52

Conread position: 1-525
Cow position: chr15:8749854-8750369 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 32

Conread position: 1-526
Cow position: chr15:15347699-15347177 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr15:21666325-21665804 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr15:31358324-31358828 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 1-572
Cow position: chr15:11624341-11624893 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 29

Conread position: 1-586
Cow position: chr15:15266233-15265657 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 96

Conread position: 1-586
Cow position: chr15:40104892-40105465 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 27

Conread position: 1-587
Cow position: chr15:12614487-12615066 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 87

Conread position: 1-588
Cow position: chr15:324369-324941 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 493, 10

Conread position: 1-806
Cow position: chr15:35648793-35648020 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 668, 29

Conread position: 2-600
Cow position: chr15:17787735-17787152 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 28

Conread position: 4-282
Cow position: chr15:11598690-11598414 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 5-182
Cow position: chr15:32709970-32710145 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 5-203
Cow position: chr15:50144931-50145123 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 5-245
Cow position: chr15:13871190-13871428 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-356
Cow position: chr15:22204688-22204340 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-362
Cow position: chr15:13428469-13428818 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-479
Cow position: chr15:2648231-2647760 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position: chr15:4384700-4385167 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-485
Cow position: chr15:7260053-7260527 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 29

Conread position: 5-486
Cow position: chr15:29009268-29009742 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr15:20748841-20749321 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr15:42320990-42320515 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 26

Conread position: 5-496
Cow position: chr15:4195888-4196377 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 488, 28

Conread position: 5-497
Cow position: chr15:6472485-6472003 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 29

Conread position: 5-497
Cow position: chr15:53338463-53338937 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 26

Conread position: 5-502
Cow position: chr15:7233737-7234221 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 29

Conread position: 5-502
Cow position: chr15:36970349-36970843 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-504
Cow position: chr15:1781679-1782179 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 26

Conread position: 5-504
Cow position: chr15:2011509-2012006 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 29

Conread position: 5-504
Cow position: chr15:18268562-18268062 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-513
Cow position: chr15:35734886-35735388 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 19

Conread position: 5-806
Cow position: chr15:36642056-36642824 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 628
Alignm E-value: 0
Alignm gaps (pig, cow): 653, 23

Conread position: 6-496
Cow position: chr15:8000816-8000320 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 6-806
Cow position: chr15:24793483-24794258 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 17

Conread position: 7-525
Cow position: chr15:7894771-7894288 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 509, 21

Conread position: 8-616
Cow position: chr15:8407990-8408587 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 23

Conread position: 9-489
Cow position: chr15:4811752-4812224 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 32

Conread position: 9-517
Cow position: chr15:4961083-4961562 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 22

Conread position: 13-432
Cow position: chr15:44828249-44828663 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 13

Conread position: 15-490
Cow position: chr15:4795116-4795583 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 12

Conread position: 18-548
Cow position: chr15:28490708-28490173 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 16

Conread position: 21-525
Cow position: chr15:37391943-37392435 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 12

Conread position: 22-587
Cow position: chr15:36627210-36626666 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 66

Conread position: 23-541
Cow position: chr15:3010408-3009889 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 10

Conread position: 31-532
Cow position: chr15:17271928-17271445 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 56

Conread position: 32-560
Cow position: chr15:51671807-51672328 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 56

Conread position: 81-502
Cow position: chr15:25789468-25789051 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 94-537
Cow position: chr15:1834948-1834504 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 149

Conread position: 118-503
Cow position: chr15:7922106-7921723 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 225

Conread position: 158-585
Cow position: chr15:24715806-24716220 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 46

Conread position: 189-572
Cow position: chr15:6621950-6622324 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 45

Conread position: 191-503
Cow position: chr15:6370167-6369860 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 195-585
Cow position: chr15:1236933-1237320 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 103

Conread position: 209-571
Cow position: chr15:11299183-11298828 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 245
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 176, 25

Conread position: 229-775
Cow position: chr15:370035-369497 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 121

Conread position: 238-574
Cow position: chr15:7934006-7934332 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 254, 70

Conread position: 313-574
Cow position: chr15:6650259-6650008 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 179, 35

Conread position: 326-569
Cow position: chr15:12453160-12453396 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 356-503
Cow position: chr15:5068623-5068770 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 124
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 412-698
Cow position: chr15:32679748-32679470 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 211

Conread position: 451-556
Cow position: chr15:51801566-51801672 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 1-160
Cow position: chr16:56320912-56321069 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 1-200
Cow position: chr16:16687944-16688141 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 88

Conread position: 1-212
Cow position: chr16:49236040-49235834 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 1-306
Cow position: chr16:29676231-29675934 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-470
Cow position: chr16:27734730-27734263 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-482
Cow position: chr16:836105-836580 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-483
Cow position: chr16:2484062-2483590 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 24

Conread position: 1-483
Cow position: chr16:12538850-12538373 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr16:15183881-15184355 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-483
Cow position: chr16:23253429-23252955 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-483
Cow position: chr16:25440694-25441176 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 12

Conread position: 1-483
Cow position: chr16:25458395-25457913 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 12

Conread position: 1-483
Cow position: chr16:29046095-29046574 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-486
Cow position: chr16:36362273-36361807 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 29

Conread position: 1-496
Cow position: chr16:36282473-36282963 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 86

Conread position: 1-503
Cow position: chr16:6549447-6548952 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr16:10808241-10808722 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position: chr16:20255236-20254739 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr16:25084697-25085193 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-503
Cow position: chr16:39820713-39821202 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 25

Conread position: 1-524
Cow position: chr16:8817030-8816511 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-526
Cow position: chr16:23982386-23982905 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 29

Conread position: 1-526
Cow position: chr16:40297101-40296583 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-528
Cow position: chr16:25341046-25341563 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 24

Conread position: 1-536
Cow position: chr16:2728238-2727684 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 32

Conread position: 1-618
Cow position: chr16:49257493-49256896 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 27

Conread position: 1-805
Cow position: chr16:42740347-42739555 (view UCSC Genome Browser custom track)
Alignm length: 814
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 30

Conread position: 1-806
Cow position: chr16:25157142-25156340 (view UCSC Genome Browser custom track)
Alignm length: 823
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 29

Conread position: 2-496
Cow position: chr16:2411894-2411403 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 31

Conread position: 5-209
Cow position: chr16:7905721-7905924 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 118, 23

Conread position: 5-334
Cow position: chr16:32605906-32606233 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 28

Conread position: 5-377
Cow position: chr16:4303391-4303031 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 5-483
Cow position: chr16:1568374-1567902 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 26

Conread position: 5-485
Cow position: chr16:5918563-5919037 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-498
Cow position: chr16:56551207-56551688 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 25

Conread position: 5-501
Cow position: chr16:6942701-6943202 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 28

Conread position: 5-504
Cow position: chr16:25187720-25188217 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 28

Conread position: 5-526
Cow position: chr16:26662829-26663344 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 5-541
Cow position: chr16:31827-32352 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 493, 28

Conread position: 7-251
Cow position: chr16:24881607-24881369 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 26, 0

Conread position: 7-526
Cow position: chr16:10204333-10203835 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 14-563
Cow position: chr16:34529413-34529959 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 19

Conread position: 17-470
Cow position: chr16:10437345-10437782 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 18-489
Cow position: chr16:2239642-2239182 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 17

Conread position: 21-497
Cow position: chr16:11052261-11052726 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 61

Conread position: 21-526
Cow position: chr16:5483416-5483918 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 14

Conread position: 23-581
Cow position: chr16:335395-335935 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 20

Conread position: 25-586
Cow position: chr16:44388482-44387908 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 63

Conread position: 28-593
Cow position: chr16:9929647-9930197 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 464, 7

Conread position: 29-500
Cow position: chr16:51685535-51686004 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 17

Conread position: 36-579
Cow position: chr16:31376147-31375633 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 52

Conread position: 44-483
Cow position: chr16:14666714-14666277 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 52-507
Cow position: chr16:29982564-29983012 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 302
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 50, 24

Conread position: 132-593
Cow position: chr16:32935362-32935832 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 93

Conread position: 140-503
Cow position: chr16:19713676-19713317 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 21

Conread position: 165-483
Cow position: chr16:9777319-9777637 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 21

Conread position: 228-788
Cow position: chr16:49235848-49235295 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 34

Conread position: 263-561
Cow position: chr16:18500014-18499722 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 32

Conread position: 287-538
Cow position: chr16:30047850-30048101 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 189, 38

Conread position: 293-585
Cow position: chr16:52815124-52814836 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 55

Conread position: 307-802
Cow position: chr16:29033094-29033587 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 40

Conread position: 372-632
Cow position: chr16:16273393-16273134 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 67

Conread position: 375-512
Cow position: chr16:25153167-25153304 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 382-806
Cow position: chr16:25257055-25257480 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 149

Conread position: 405-596
Cow position: chr16:5889392-5889582 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 121

Conread position: 421-606
Cow position: chr16:23807458-23807645 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 37, 48

Conread position: 453-739
Cow position: chr16:42050603-42050335 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 568-716
Cow position: chr16:49234836-49234687 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 591-806
Cow position: chr16:18499381-18499165 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 619-808
Cow position: chr16:49256768-49256572 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-239
Cow position: chr17:2579212-2579444 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 230, 12

Conread position: 1-254
Cow position: chr17:15370728-15370974 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 0

Conread position: 1-268
Cow position: chr17:28109737-28110003 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 30

Conread position: 1-470
Cow position: chr17:16859905-16859451 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr17:15850049-15850527 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 32

Conread position: 1-483
Cow position: chr17:16889776-16890254 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 29

Conread position: 1-489
Cow position: chr17:11088070-11087588 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-490
Cow position: chr17:20183574-20183097 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 27

Conread position: 1-503
Cow position: chr17:1946627-1947119 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 30

Conread position: 1-503
Cow position: chr17:4059759-4060249 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 1-503
Cow position: chr17:18185873-18185385 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-503
Cow position: chr17:22429831-22429338 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 29

Conread position: 1-503
Cow position: chr17:23857381-23856884 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 27

Conread position: 1-503
Cow position: chr17:27345456-27345948 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 30

Conread position: 1-503
Cow position: chr17:35591866-35592364 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 29

Conread position: 1-516
Cow position: chr17:18104029-18103522 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-523
Cow position: chr17:13857122-13856595 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 32

Conread position: 1-527
Cow position: chr17:13929319-13929842 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-537
Cow position: chr17:152816-152292 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 11

Conread position: 1-593
Cow position: chr17:4081304-4081876 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 29

Conread position: 1-743
Cow position: chr17:14325842-14325125 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 12

Conread position: 2-207
Cow position: chr17:2738030-2738232 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 2-504
Cow position: chr17:1879745-1880247 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 48

Conread position: 4-526
Cow position: chr17:14893815-14894326 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 5-203
Cow position: chr17:11783026-11783222 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 5-378
Cow position: chr17:22160571-22160941 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-414
Cow position: chr17:24780703-24781109 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position: chr17:3643181-3642706 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-486
Cow position: chr17:2248926-2248451 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr17:1383156-1382678 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-502
Cow position: chr17:6089506-6089012 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr17:24633612-24634103 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-504
Cow position: chr17:20666071-20665571 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-540
Cow position: chr17:14217369-14216835 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 479, 28

Conread position: 5-541
Cow position: chr17:8208765-8209298 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 16

Conread position: 6-539
Cow position: chr17:2173533-2174062 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 81

Conread position: 6-588
Cow position: chr17:20401338-20401895 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 22

Conread position: 6-597
Cow position: chr17:6002356-6001777 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 24

Conread position: 14-503
Cow position: chr17:22131898-22132378 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 15-489
Cow position: chr17:6259510-6259980 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 21-501
Cow position: chr17:15143698-15143219 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 12

Conread position: 24-496
Cow position: chr17:20088056-20087603 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 468, 7

Conread position: 28-329
Cow position: chr17:15322501-15322786 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 28-486
Cow position: chr17:9653779-9653323 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 32-592
Cow position: chr17:4295048-4295581 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 33-500
Cow position: chr17:44853252-44852786 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 18

Conread position: 33-592
Cow position: chr17:42264201-42264738 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 59

Conread position: 84-503
Cow position: chr17:18027025-18026607 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 90-472
Cow position: chr17:2555861-2556241 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 141-293
Cow position: chr17:1283993-1283847 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 127, 73

Conread position: 185-640
Cow position: chr17:15370879-15371335 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 166

Conread position: 208-546
Cow position: chr17:18325135-18324803 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 27

Conread position: 253-500
Cow position: chr17:602523-602291 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 87, 0

Conread position: 273-586
Cow position: chr17:3709283-3708975 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 246, 34

Conread position: 282-501
Cow position: chr17:12979867-12979650 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 34

Conread position: 294-503
Cow position: chr17:1283763-1283555 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 315-502
Cow position: chr17:22557583-22557771 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 37

Conread position: 496-743
Cow position: chr17:36987552-36987310 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 177, 94

Conread position: 508-806
Cow position: chr17:18300585-18300281 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 206
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 28, 79

Conread position: 591-806
Cow position: chr17:20401986-20402203 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 55, 18

Conread position: 1-163
Cow position: chr18:25349898-25350058 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 1-185
Cow position: chr18:32651855-32652036 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 33

Conread position: 1-263
Cow position: chr18:27986888-27987146 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-427
Cow position: chr18:54024497-54024078 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 18

Conread position: 1-483
Cow position: chr18:16176747-16176280 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 32

Conread position: 1-483
Cow position: chr18:23797510-23797985 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr18:28974041-28973565 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-483
Cow position: chr18:51480699-51481177 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 27

Conread position: 1-496
Cow position: chr18:33358727-33359217 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 18

Conread position: 1-496
Cow position: chr18:43147065-43146574 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 29

Conread position: 1-497
Cow position: chr18:35335348-35335831 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-503
Cow position: chr18:23944512-23944015 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 29

Conread position: 1-503
Cow position: chr18:33268700-33269183 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 29

Conread position: 1-503
Cow position: chr18:47719706-47719226 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 20

Conread position: 1-503
Cow position: chr18:48221736-48222236 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 29

Conread position: 1-503
Cow position: chr18:53785700-53786195 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 27

Conread position: 1-504
Cow position: chr18:51310442-51310942 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 63

Conread position: 1-526
Cow position: chr18:36508192-36508713 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr18:41840966-41840444 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-601
Cow position: chr18:2887164-2886564 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 31

Conread position: 1-806
Cow position: chr18:54171984-54171212 (view UCSC Genome Browser custom track)
Alignm length: 813
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 492, 32

Conread position: 5-160
Cow position: chr18:37585800-37585648 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 5-208
Cow position: chr18:51660280-51660481 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 124, 28

Conread position: 5-373
Cow position: chr18:16660141-16659791 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 5-483
Cow position: chr18:14415842-14416313 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 5-489
Cow position: chr18:55089062-55088581 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr18:22602350-22602844 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr18:33953705-33953218 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 5-502
Cow position: chr18:51689490-51689981 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 5-503
Cow position: chr18:6869392-6868901 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 12

Conread position: 5-503
Cow position: chr18:39748445-39748935 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 23

Conread position: 5-504
Cow position: chr18:19352249-19352745 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 479, 28

Conread position: 5-541
Cow position: chr18:16078566-16079115 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 16

Conread position: 5-562
Cow position: chr18:51257846-51258398 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 25

Conread position: 5-806
Cow position: chr18:29236681-29237469 (view UCSC Genome Browser custom track)
Alignm length: 806
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 485, 23

Conread position: 6-302
Cow position: chr18:44621623-44621917 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 27

Conread position: 7-190
Cow position: chr18:22869620-22869801 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 7-308
Cow position: chr18:17992697-17992401 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 7-503
Cow position: chr18:54044836-54044365 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 9-503
Cow position: chr18:32293642-32294116 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 23

Conread position: 14-320
Cow position: chr18:35288402-35288714 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 75

Conread position: 17-504
Cow position: chr18:51341561-51342049 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 476, 16

Conread position: 18-428
Cow position: chr18:18897377-18897776 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 72

Conread position: 18-497
Cow position: chr18:2019810-2019335 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 21-563
Cow position: chr18:16533856-16534402 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 66

Conread position: 45-600
Cow position: chr18:36258452-36257903 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 19

Conread position: 72-501
Cow position: chr18:5980371-5980785 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 284
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 57, 16

Conread position: 81-483
Cow position: chr18:14130326-14130722 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 100-483
Cow position: chr18:52650887-52651257 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 167-503
Cow position: chr18:19539557-19539227 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 0

Conread position: 181-586
Cow position: chr18:54269622-54270018 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 32

Conread position: 217-581
Cow position: chr18:16843263-16842904 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 66

Conread position: 292-503
Cow position: chr18:17992273-17992063 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 313-581
Cow position: chr18:29763539-29763800 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 35

Conread position: 335-702
Cow position: chr18:56462713-56462351 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 156

Conread position: 1-211
Cow position: chr19:4252494-4252288 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 0

Conread position: 1-269
Cow position: chr19:28376394-28376647 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-286
Cow position: chr19:27052900-27052623 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 1-302
Cow position: chr19:29209424-29209721 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-362
Cow position: chr19:55078609-55078967 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-378
Cow position: chr19:30372146-30372511 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 1-426
Cow position: chr19:261298-261728 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 30

Conread position: 1-432
Cow position: chr19:4385348-4385772 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 32

Conread position: 1-483
Cow position: chr19:203827-204303 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 1-483
Cow position: chr19:28581792-28581317 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 45

Conread position: 1-483
Cow position: chr19:32665396-32665867 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-483
Cow position: chr19:40852567-40852096 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-489
Cow position: chr19:170877-170399 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-496
Cow position: chr19:10672443-10671951 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chr19:416516-417022 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 29

Conread position: 1-528
Cow position: chr19:172074-172598 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 497, 32

Conread position: 1-586
Cow position: chr19:30755040-30755615 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 87

Conread position: 2-363
Cow position: chr19:543763-543404 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 75

Conread position: 2-526
Cow position: chr19:39390385-39390893 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 5-163
Cow position: chr19:52152394-52152238 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 5-266
Cow position: chr19:32193444-32193704 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 28

Conread position: 5-459
Cow position: chr19:32244547-32245002 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 85

Conread position: 5-489
Cow position: chr19:43143586-43144064 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-496
Cow position: chr19:28593144-28593619 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 28

Conread position: 10-586
Cow position: chr19:15953733-15954279 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 9

Conread position: 15-483
Cow position: chr19:33873304-33873768 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 18-395
Cow position: chr19:31341586-31341976 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 12

Conread position: 20-489
Cow position: chr19:37778-38243 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 21-365
Cow position: chr19:34301-34640 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 66

Conread position: 21-569
Cow position: chr19:32202635-32203168 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 71

Conread position: 31-636
Cow position: chr19:32223547-32222953 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 55

Conread position: 35-456
Cow position: chr19:350387-349976 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-347
Cow position: chr19:9117649-9117343 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 207
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 46

Conread position: 83-387
Cow position: chr19:32237737-32237441 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 143-612
Cow position: chr19:35376798-35377249 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 165-808
Cow position: chr19:377871-377244 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 49

Conread position: 181-502
Cow position: chr19:1032118-1032436 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 201-806
Cow position: chr19:352932-352320 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 152

Conread position: 242-593
Cow position: chr19:42649010-42648664 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 106

Conread position: 297-503
Cow position: chr19:28376641-28376848 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 51

Conread position: 298-569
Cow position: chr19:40817545-40817270 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 194, 52

Conread position: 329-503
Cow position: chr19:341411-341583 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 333-808
Cow position: chr19:42877-43350 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 231

Conread position: 356-806
Cow position: chr19:163215-162770 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 161

Conread position: 357-637
Cow position: chr19:27037735-27037456 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 169, 60

Conread position: 368-806
Cow position: chr19:27052621-27052176 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 94

Conread position: 430-792
Cow position: chr19:263092-263453 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 248
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 174

Conread position: 439-806
Cow position: chr19:137058-136693 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 54

Conread position: 474-798
Cow position: chr19:47610414-47610082 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 57, 0

Conread position: 474-806
Cow position: chr19:44532445-44532789 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 255

Conread position: 567-800
Cow position: chr19:3138021-3138260 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 104, 209

Conread position: 573-799
Cow position: chr19:44224832-44224606 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 59

Conread position: 1-154
Cow position: chr2:24921651-24921802 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 1-160
Cow position: chr2:51305598-51305445 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 1-197
Cow position: chr2:8117558-8117750 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 1-210
Cow position: chr2:45213950-45213743 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 32, 0

Conread position: 1-263
Cow position: chr2:25888898-25888640 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 24

Conread position: 1-288
Cow position: chr2:12224843-12224556 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 86

Conread position: 1-305
Cow position: chr2:41149351-41149650 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 31

Conread position: 1-344
Cow position: chr2:975965-975631 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 22

Conread position: 1-373
Cow position: chr2:6877800-6878152 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 87

Conread position: 1-376
Cow position: chr2:32458701-32458332 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-394
Cow position: chr2:26865237-26864860 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-403
Cow position: chr2:56438414-56438027 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 12

Conread position: 1-414
Cow position: chr2:24145582-24145985 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-443
Cow position: chr2:52655779-52656210 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 27

Conread position: 1-456
Cow position: chr2:202345-201908 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 29

Conread position: 1-458
Cow position: chr2:85356461-85356019 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-470
Cow position: chr2:283387-282921 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr2:28650919-28650447 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 1-486
Cow position: chr2:14560503-14560967 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 1-486
Cow position: chr2:26868582-26869054 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 27

Conread position: 1-490
Cow position: chr2:52152546-52152073 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 29

Conread position: 1-496
Cow position: chr2:5814104-5813587 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 32

Conread position: 1-496
Cow position: chr2:11969456-11968971 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 29

Conread position: 1-496
Cow position: chr2:32654656-32655134 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 25

Conread position: 1-496
Cow position: chr2:44346021-44346513 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-499
Cow position: chr2:78741440-78741933 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 33

Conread position: 1-501
Cow position: chr2:78761784-78762272 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 24

Conread position: 1-502
Cow position: chr2:52061975-52062470 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-503
Cow position: chr2:6772857-6772368 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 451, 29

Conread position: 1-503
Cow position: chr2:10844030-10843546 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 29

Conread position: 1-503
Cow position: chr2:72922523-72922027 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-504
Cow position: chr2:5905542-5905058 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-569
Cow position: chr2:7211011-7211567 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 530, 27

Conread position: 1-595
Cow position: chr2:7901589-7902174 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 1-764
Cow position: chr2:28621518-28620782 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 33

Conread position: 1-806
Cow position: chr2:16288558-16289324 (view UCSC Genome Browser custom track)
Alignm length: 812
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 29

Conread position: 2-483
Cow position: chr2:65939140-65938666 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 2-503
Cow position: chr2:44991973-44991492 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 5-266
Cow position: chr2:5519680-5519419 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 83

Conread position: 5-291
Cow position: chr2:40245369-40245649 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 5-343
Cow position: chr2:10733525-10733196 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 5-486
Cow position: chr2:51991221-51990743 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr2:176219-175738 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 5-490
Cow position: chr2:4405038-4404557 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-497
Cow position: chr2:59414370-59413882 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 28

Conread position: 5-502
Cow position: chr2:2184947-2184453 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 28

Conread position: 5-502
Cow position: chr2:3325257-3324761 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 30

Conread position: 5-502
Cow position: chr2:41656398-41656887 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 26

Conread position: 5-502
Cow position: chr2:57142377-57141883 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-503
Cow position: chr2:2102155-2101666 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 5-503
Cow position: chr2:10712120-10711632 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 5-504
Cow position: chr2:44090609-44091110 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 456, 28

Conread position: 5-541
Cow position: chr2:9907223-9907759 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 14

Conread position: 5-541
Cow position: chr2:25031166-25030630 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 25

Conread position: 5-541
Cow position: chr2:26921006-26921531 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 28

Conread position: 5-541
Cow position: chr2:39420905-39421425 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 16

Conread position: 5-573
Cow position: chr2:50321609-50322148 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 23

Conread position: 5-806
Cow position: chr2:34565617-34564834 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 666, 25

Conread position: 6-795
Cow position: chr2:2357146-2356377 (view UCSC Genome Browser custom track)
Alignm length: 799
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 24

Conread position: 7-502
Cow position: chr2:49471558-49472050 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 8-503
Cow position: chr2:422380-422872 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 22

Conread position: 14-407
Cow position: chr2:10730236-10729849 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 18

Conread position: 17-803
Cow position: chr2:28643797-28643045 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 654, 14

Conread position: 18-483
Cow position: chr2:47810334-47810797 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 15

Conread position: 18-499
Cow position: chr2:2380448-2380907 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 19-503
Cow position: chr2:44106768-44106305 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 19-503
Cow position: chr2:82166930-82167413 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 68

Conread position: 21-503
Cow position: chr2:46945992-46946471 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 66

Conread position: 21-736
Cow position: chr2:1673328-1672638 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 644, 9

Conread position: 23-489
Cow position: chr2:212892-212431 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 64

Conread position: 28-256
Cow position: chr2:1491096-1490870 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 28-541
Cow position: chr2:47039081-47038568 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 463, 59

Conread position: 29-502
Cow position: chr2:5871002-5870551 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 57

Conread position: 29-503
Cow position: chr2:53473825-53473357 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 29-547
Cow position: chr2:16076967-16076448 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 57

Conread position: 30-526
Cow position: chr2:13046356-13045879 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 33-230
Cow position: chr2:5481305-5481109 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 64-797
Cow position: chr2:15578204-15577477 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 22

Conread position: 85-584
Cow position: chr2:3837593-3837114 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 422, 37

Conread position: 86-795
Cow position: chr2:39621676-39622391 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 108

Conread position: 90-697
Cow position: chr2:36054243-36053659 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 74

Conread position: 100-503
Cow position: chr2:1490575-1490172 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 110
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 118-806
Cow position: chr2:14821929-14822600 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 72

Conread position: 132-585
Cow position: chr2:74391682-74391218 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 152

Conread position: 165-483
Cow position: chr2:24921866-24922184 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 188

Conread position: 192-682
Cow position: chr2:36031241-36030757 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 127

Conread position: 217-609
Cow position: chr2:51305216-51304827 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 129

Conread position: 225-497
Cow position: chr2:5481138-5480871 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 250-573
Cow position: chr2:75676353-75676041 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 228
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 174, 26

Conread position: 276-545
Cow position: chr2:28616627-28616362 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 276-593
Cow position: chr2:32389363-32389680 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 163

Conread position: 327-586
Cow position: chr2:41146874-41147133 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 205

Conread position: 340-561
Cow position: chr2:85068918-85068710 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 182, 148

Conread position: 359-649
Cow position: chr2:41149652-41149941 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 79

Conread position: 388-586
Cow position: chr2:73191640-73191836 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 142, 11

Conread position: 398-558
Cow position: chr2:10733060-10732902 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 426-614
Cow position: chr2:24393442-24393258 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 105, 136

Conread position: 451-587
Cow position: chr2:201703-201567 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 37

Conread position: 532-797
Cow position: chr2:5485452-5485193 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 55

Conread position: 543-701
Cow position: chr2:28616197-28616040 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 128, 17

Conread position: 623-806
Cow position: chr2:782141-781957 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 1-250
Cow position: chr20:10846258-10846010 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 209, 30

Conread position: 1-293
Cow position: chr20:7085752-7085470 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 190
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 1-481
Cow position: chr20:28160601-28161067 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-483
Cow position: chr20:13762726-13763203 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 20

Conread position: 1-483
Cow position: chr20:25851170-25850692 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr20:30684159-30684619 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-496
Cow position: chr20:8313613-8313127 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 20

Conread position: 1-503
Cow position: chr20:15064589-15065084 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 30

Conread position: 1-526
Cow position: chr20:5534762-5535279 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-526
Cow position: chr20:12438941-12438419 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr20:23469840-23469324 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 33

Conread position: 1-586
Cow position: chr20:22206367-22206938 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 68

Conread position: 2-503
Cow position: chr20:3252312-3251816 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 26

Conread position: 5-212
Cow position: chr20:19192304-19192099 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 5-246
Cow position: chr20:35119149-35119389 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 227, 28

Conread position: 5-376
Cow position: chr20:11679286-11678918 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position: chr20:21914150-21914626 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 28

Conread position: 5-483
Cow position: chr20:27869021-27869496 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position: chr20:28565776-28565297 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 84

Conread position: 5-483
Cow position: chr20:35119398-35119868 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 28

Conread position: 5-502
Cow position: chr20:5560891-5560397 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-525
Cow position: chr20:5484014-5484535 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 82

Conread position: 7-578
Cow position: chr20:31379060-31378494 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 97

Conread position: 15-483
Cow position: chr20:8004392-8003927 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 19

Conread position: 17-483
Cow position: chr20:15291854-15292309 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 21-281
Cow position: chr20:10102711-10102461 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 8, 66

Conread position: 21-532
Cow position: chr20:3270551-3271053 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 10

Conread position: 23-541
Cow position: chr20:822608-823128 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 468, 64

Conread position: 23-766
Cow position: chr20:18315742-18315043 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 28

Conread position: 28-526
Cow position: chr20:15098031-15097535 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 36-553
Cow position: chr20:9954129-9953619 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 496, 52

Conread position: 57-500
Cow position: chr20:15947518-15947064 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 31

Conread position: 70-502
Cow position: chr20:25960991-25961421 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 87-537
Cow position: chr20:13680153-13679700 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 103

Conread position: 132-483
Cow position: chr20:29948448-29948798 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 144-504
Cow position: chr20:3684524-3684168 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 129

Conread position: 231-586
Cow position: chr20:13434902-13434559 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 253-505
Cow position: chr20:35104562-35104309 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 289-503
Cow position: chr20:10846011-10845803 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 335-586
Cow position: chr20:22717589-22717337 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 72, 15

Conread position: 566-806
Cow position: chr20:8215554-8215795 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 72, 170

Conread position: 1-230
Cow position: chr21:1190981-1191214 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 80, 32

Conread position: 1-305
Cow position: chr21:3615231-3615534 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 29

Conread position: 1-321
Cow position: chr21:2716742-2716425 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 30

Conread position: 1-462
Cow position: chr21:47948048-47948505 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-470
Cow position: chr21:10850019-10850484 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr21:3778707-3779184 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr21:31559716-31559238 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 1-489
Cow position: chr21:48116047-48116525 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 34

Conread position: 1-490
Cow position: chr21:2789052-2788568 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 29

Conread position: 1-503
Cow position: chr21:2530187-2529690 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 29

Conread position: 1-503
Cow position: chr21:4456768-4457264 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 1-503
Cow position: chr21:13124056-13123568 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position: chr21:34292958-34293453 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 30

Conread position: 1-503
Cow position: chr21:35596308-35596804 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 1-526
Cow position: chr21:30561741-30562263 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-563
Cow position: chr21:2416178-2416717 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 504, 24

Conread position: 2-806
Cow position: chr21:2541475-2540675 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 28

Conread position: 5-264
Cow position: chr21:27708705-27708963 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 28

Conread position: 5-329
Cow position: chr21:33251335-33251657 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-425
Cow position: chr21:4222744-4222333 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 5-486
Cow position: chr21:37044856-37045331 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-517
Cow position: chr21:6699612-6699130 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 340
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 262, 25

Conread position: 5-526
Cow position: chr21:145863-146383 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 8

Conread position: 5-541
Cow position: chr21:11505530-11506076 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 16

Conread position: 5-541
Cow position: chr21:39425006-39425543 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 28

Conread position: 5-554
Cow position: chr21:23860726-23861268 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 30

Conread position: 8-560
Cow position: chr21:36714578-36715124 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 22

Conread position: 18-489
Cow position: chr21:11453700-11453232 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-525
Cow position: chr21:4076801-4077299 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 472, 12

Conread position: 18-693
Cow position: chr21:23811832-23812504 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 616, 12

Conread position: 21-196
Cow position: chr21:17572880-17573053 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 21-523
Cow position: chr21:7267583-7267074 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 65

Conread position: 23-486
Cow position: chr21:4590029-4589570 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 8

Conread position: 24-564
Cow position: chr21:2674665-2674111 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 9

Conread position: 25-444
Cow position: chr21:3426447-3426864 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 28-300
Cow position: chr21:26819056-26818785 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 29-802
Cow position: chr21:4183491-4184236 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 33-503
Cow position: chr21:2883778-2883311 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 463, 53

Conread position: 34-806
Cow position: chr21:9891574-9892354 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 52

Conread position: 48-483
Cow position: chr21:27282372-27282803 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 38

Conread position: 59-522
Cow position: chr21:8678364-8677903 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 59-541
Cow position: chr21:6339562-6340046 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 28

Conread position: 113-503
Cow position: chr21:40271628-40271238 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 227

Conread position: 117-503
Cow position: chr21:3798314-3797933 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 195-524
Cow position: chr21:4086933-4087261 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 22

Conread position: 251-711
Cow position: chr21:30226206-30226656 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 97

Conread position: 274-504
Cow position: chr21:3615531-3615750 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 39

Conread position: 317-802
Cow position: chr21:359287-359768 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 31

Conread position: 326-503
Cow position: chr21:34258728-34258551 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 74, 24

Conread position: 342-798
Cow position: chr21:9870023-9870468 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 180

Conread position: 358-496
Cow position: chr21:2716425-2716286 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 120
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 0

Conread position: 401-797
Cow position: chr21:29105-29498 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 0

Conread position: 1-195
Cow position: chr22:118049-117857 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 65, 27

Conread position: 1-338
Cow position: chr22:1293730-1293395 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 29

Conread position: 1-452
Cow position: chr22:32485566-32485139 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 1-481
Cow position: chr22:560933-560462 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 32

Conread position: 1-483
Cow position: chr22:17328973-17328494 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr22:31313111-31313584 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-483
Cow position: chr22:39469751-39469278 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-483
Cow position: chr22:44933746-44934224 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-485
Cow position: chr22:37131418-37131880 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 1-489
Cow position: chr22:21589099-21589575 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-490
Cow position: chr22:1319162-1319649 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 29

Conread position: 1-503
Cow position: chr22:158144-157641 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 89

Conread position: 1-504
Cow position: chr22:1878558-1879063 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 32

Conread position: 1-526
Cow position: chr22:18816616-18816098 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-526
Cow position: chr22:19143933-19143411 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-526
Cow position: chr22:34168098-34168619 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr22:36861764-36861242 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-558
Cow position: chr22:15851105-15851644 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 25

Conread position: 1-574
Cow position: chr22:5933213-5932662 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 492, 32

Conread position: 1-575
Cow position: chr22:1321380-1321923 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 1-584
Cow position: chr22:7277289-7277863 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 29

Conread position: 1-606
Cow position: chr22:11030726-11031329 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 535, 50

Conread position: 1-740
Cow position: chr22:8136430-8135707 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 27

Conread position: 2-594
Cow position: chr22:44353180-44352604 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 509, 32

Conread position: 4-526
Cow position: chr22:5672506-5673027 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 12

Conread position: 5-266
Cow position: chr22:6985025-6985284 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-443
Cow position: chr22:24949600-24950035 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr22:10910084-10909582 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 16

Conread position: 5-496
Cow position: chr22:16200263-16200733 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 28

Conread position: 5-501
Cow position: chr22:293391-292907 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 23

Conread position: 5-502
Cow position: chr22:44369847-44369362 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 21

Conread position: 5-503
Cow position: chr22:39882405-39881911 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 5-504
Cow position: chr22:536871-537371 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-540
Cow position: chr22:35672585-35672050 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-574
Cow position: chr22:27310006-27309432 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 84

Conread position: 5-606
Cow position: chr22:6503900-6503309 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 23

Conread position: 6-537
Cow position: chr22:27386660-27386140 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 429, 27

Conread position: 6-806
Cow position: chr22:13917278-13918063 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 19

Conread position: 7-483
Cow position: chr22:36183530-36184001 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 75

Conread position: 14-483
Cow position: chr22:15314169-15313707 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 19

Conread position: 18-205
Cow position: chr22:10076968-10076787 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 185, 12

Conread position: 18-504
Cow position: chr22:44489670-44490155 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 15

Conread position: 21-503
Cow position: chr22:46853128-46853607 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 12

Conread position: 21-563
Cow position: chr22:327367-326840 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 495, 11

Conread position: 22-750
Cow position: chr22:41419902-41419190 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 62

Conread position: 23-505
Cow position: chr22:10546433-10546915 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 468, 10

Conread position: 23-805
Cow position: chr22:3306945-3306170 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 63

Conread position: 27-577
Cow position: chr22:4232776-4232250 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 345
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 75, 24

Conread position: 28-425
Cow position: chr22:36267163-36267551 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 48

Conread position: 28-503
Cow position: chr22:525882-525428 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 22

Conread position: 28-503
Cow position: chr22:36736555-36737024 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 58

Conread position: 28-537
Cow position: chr22:32348188-32347692 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 61

Conread position: 31-806
Cow position: chr22:44609401-44610147 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 45

Conread position: 57-517
Cow position: chr22:44475073-44475513 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 100

Conread position: 57-700
Cow position: chr22:1270689-1270087 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 614, 29

Conread position: 66-504
Cow position: chr22:36533907-36533475 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 20

Conread position: 72-503
Cow position: chr22:46547828-46547399 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 87-489
Cow position: chr22:20240991-20240591 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 89-326
Cow position: chr22:45880256-45880023 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 94, 142

Conread position: 115-552
Cow position: chr22:1048289-1048715 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 101

Conread position: 132-316
Cow position: chr22:13772873-13773053 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 132-503
Cow position: chr22:42771370-42771720 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 141-541
Cow position: chr22:6020566-6020970 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 199

Conread position: 239-563
Cow position: chr22:117840-117511 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 109

Conread position: 279-806
Cow position: chr22:1283608-1283088 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 69

Conread position: 289-805
Cow position: chr22:23853383-23853898 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 59

Conread position: 341-577
Cow position: chr22:301930-301703 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 29

Conread position: 398-503
Cow position: chr22:13773056-13773159 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 473-806
Cow position: chr22:35907484-35907158 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 22

Conread position: 502-766
Cow position: chr22:46547834-46548090 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 169, 179

Conread position: 564-806
Cow position: chr22:1322131-1322362 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 112, 34

Conread position: 603-806
Cow position: chr22:6503114-6502903 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 174

Conread position: 603-806
Cow position: chr22:8740404-8740210 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 79

Conread position: 1-414
Cow position: chr23:4815839-4816251 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 32

Conread position: 1-461
Cow position: chr23:2524429-2523974 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-461
Cow position: chr23:5875005-5874559 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 23

Conread position: 1-479
Cow position: chr23:28913179-28913637 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr23:967581-967105 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 29

Conread position: 1-483
Cow position: chr23:4888447-4888918 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr23:15525380-15525855 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-483
Cow position: chr23:22147492-22147009 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 1-488
Cow position: chr23:36031602-36031123 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-503
Cow position: chr23:988874-988383 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 29

Conread position: 1-503
Cow position: chr23:4276725-4277220 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 10

Conread position: 1-526
Cow position: chr23:2757346-2757882 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 32

Conread position: 1-526
Cow position: chr23:3881928-3881417 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 1-526
Cow position: chr23:4640858-4640336 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr23:11778252-11778776 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 32

Conread position: 1-526
Cow position: chr23:30636535-30636013 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 32

Conread position: 1-538
Cow position: chr23:27399270-27399801 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 32

Conread position: 1-563
Cow position: chr23:16617084-16616515 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 1-568
Cow position: chr23:15220131-15219563 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 32

Conread position: 1-586
Cow position: chr23:19332630-19332064 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 27

Conread position: 2-504
Cow position: chr23:7273425-7273897 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 29

Conread position: 4-563
Cow position: chr23:14974795-14974233 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 86

Conread position: 5-489
Cow position: chr23:4359600-4360081 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 5-489
Cow position: chr23:20301982-20302463 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 5-489
Cow position: chr23:28217061-28217541 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 28

Conread position: 5-502
Cow position: chr23:31446585-31447079 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-523
Cow position: chr23:5779314-5778803 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 5-524
Cow position: chr23:4434235-4434744 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 30

Conread position: 5-541
Cow position: chr23:2313467-2312932 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr23:19950813-19950279 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 28

Conread position: 6-480
Cow position: chr23:20156459-20155973 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 14

Conread position: 10-552
Cow position: chr23:39026224-39026764 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 337
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 54, 13

Conread position: 15-446
Cow position: chr23:3013427-3013854 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 13

Conread position: 18-483
Cow position: chr23:19489321-19489787 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 13

Conread position: 21-503
Cow position: chr23:4509889-4510342 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 12

Conread position: 31-500
Cow position: chr23:25611833-25612284 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 289
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 139, 29

Conread position: 39-635
Cow position: chr23:38578095-38578674 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 49

Conread position: 42-500
Cow position: chr23:6216380-6216833 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 42

Conread position: 60-503
Cow position: chr23:31591983-31591537 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 38

Conread position: 63-517
Cow position: chr23:25684231-25683786 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 19

Conread position: 114-697
Cow position: chr23:29474676-29474100 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 56

Conread position: 132-609
Cow position: chr23:1327565-1327102 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 138

Conread position: 229-503
Cow position: chr23:8980318-8980056 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 287-503
Cow position: chr23:2765403-2765188 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 287-600
Cow position: chr23:22875623-22875323 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 60

Conread position: 358-585
Cow position: chr23:31650790-31650567 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 115, 54

Conread position: 400-643
Cow position: chr23:1402719-1402481 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 35

Conread position: 1-256
Cow position: chr24:13531678-13531431 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-443
Cow position: chr24:22951988-22952427 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-479
Cow position: chr24:4415671-4415202 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr24:14384759-14384284 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 34

Conread position: 1-483
Cow position: chr24:19833236-19833716 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 24

Conread position: 1-483
Cow position: chr24:33933220-33933697 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-502
Cow position: chr24:14584946-14585426 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr24:6145212-6145719 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 27

Conread position: 1-504
Cow position: chr24:35838773-35838265 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 29

Conread position: 1-556
Cow position: chr24:17303744-17303213 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 32

Conread position: 1-805
Cow position: chr24:12797908-12797120 (view UCSC Genome Browser custom track)
Alignm length: 806
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 670, 21

Conread position: 1-806
Cow position: chr24:16649448-16648671 (view UCSC Genome Browser custom track)
Alignm length: 808
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 31

Conread position: 1-806
Cow position: chr24:36560231-36559442 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 670, 29

Conread position: 5-187
Cow position: chr24:13021528-13021704 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 5-315
Cow position: chr24:7060958-7061264 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-464
Cow position: chr24:44017402-44017858 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-485
Cow position: chr24:6025239-6024765 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr24:12485461-12484980 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr24:13188044-13188510 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 16

Conread position: 5-489
Cow position: chr24:22793033-22793509 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 5-489
Cow position: chr24:33739488-33739003 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 28

Conread position: 5-496
Cow position: chr24:9188875-9188387 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 28

Conread position: 5-497
Cow position: chr24:6083873-6084362 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr24:8030007-8030501 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-503
Cow position: chr24:12086056-12086549 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 26

Conread position: 5-606
Cow position: chr24:9092417-9091827 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 489, 26

Conread position: 5-758
Cow position: chr24:2635976-2636724 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 6-412
Cow position: chr24:12161736-12162134 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 13-533
Cow position: chr24:6335563-6336060 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 14-526
Cow position: chr24:12335930-12335401 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 74

Conread position: 14-587
Cow position: chr24:35841748-35841187 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 16

Conread position: 18-308
Cow position: chr24:6645284-6645570 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 22-399
Cow position: chr24:12131614-12131239 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 66

Conread position: 23-586
Cow position: chr24:12568122-12568663 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 66

Conread position: 31-475
Cow position: chr24:15392428-15392017 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 33-502
Cow position: chr24:40548760-40549224 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 54

Conread position: 65-501
Cow position: chr24:37216919-37217348 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 21

Conread position: 94-504
Cow position: chr24:6660665-6660246 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 167

Conread position: 334-569
Cow position: chr24:16376708-16376934 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 14

Conread position: 346-613
Cow position: chr24:14333237-14333503 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 256, 0

Conread position: 357-585
Cow position: chr24:38636810-38637039 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 173, 0

Conread position: 383-593
Cow position: chr24:13302754-13302545 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 138, 55

Conread position: 516-806
Cow position: chr24:12206273-12205990 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 151, 113

Conread position: 573-805
Cow position: chr24:36708344-36708572 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 44

Conread position: 671-806
Cow position: chr24:6336032-6336169 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 1-199
Cow position: chr25:18411482-18411284 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 88

Conread position: 1-254
Cow position: chr25:26867034-26867272 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 1-255
Cow position: chr25:18173169-18173423 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 86

Conread position: 1-445
Cow position: chr25:18027820-18027376 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 29

Conread position: 1-482
Cow position: chr25:25506459-25506935 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr25:13780845-13781317 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 1-496
Cow position: chr25:11375537-11375048 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 27

Conread position: 1-500
Cow position: chr25:20494171-20494653 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 327
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 141, 31

Conread position: 1-503
Cow position: chr25:8674724-8675223 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-503
Cow position: chr25:14015986-14016472 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 12

Conread position: 1-503
Cow position: chr25:18060777-18060295 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr25:34656636-34656139 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 29

Conread position: 1-526
Cow position: chr25:18890206-18889685 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 32

Conread position: 1-526
Cow position: chr25:22147303-22147825 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-527
Cow position: chr25:36240356-36240879 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 22

Conread position: 1-571
Cow position: chr25:19288538-19287970 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 27

Conread position: 1-573
Cow position: chr25:12759785-12759222 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 11

Conread position: 1-593
Cow position: chr25:18092828-18093407 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 5-486
Cow position: chr25:20777084-20776612 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 28

Conread position: 5-504
Cow position: chr25:17589735-17589242 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 28

Conread position: 5-504
Cow position: chr25:19916896-19917396 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-526
Cow position: chr25:26279079-26279589 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 28

Conread position: 5-593
Cow position: chr25:11933712-11933132 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 531, 25

Conread position: 7-503
Cow position: chr25:18276009-18275521 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 24

Conread position: 8-160
Cow position: chr25:17563104-17562955 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 8-324
Cow position: chr25:17560795-17560476 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 23

Conread position: 18-228
Cow position: chr25:18302617-18302823 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 21-503
Cow position: chr25:17468867-17468395 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 9

Conread position: 46-481
Cow position: chr25:12942847-12942415 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 96-499
Cow position: chr25:33665967-33665570 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 96

Conread position: 117-496
Cow position: chr25:27022645-27022265 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 224

Conread position: 225-503
Cow position: chr25:18303431-18303707 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 230-490
Cow position: chr25:9544100-9544355 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 591-806
Cow position: chr25:11933048-11932830 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 112

Conread position: 1-229
Cow position: chr26:6850344-6850119 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 29, 0

Conread position: 1-245
Cow position: chr26:3074357-3074594 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 24

Conread position: 1-291
Cow position: chr26:11536999-11536719 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 1-363
Cow position: chr26:20254900-20255242 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 29

Conread position: 1-483
Cow position: chr26:5675000-5675467 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chr26:12574563-12574081 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-526
Cow position: chr26:17397100-17396580 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 1-526
Cow position: chr26:19351683-19351163 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 2-196
Cow position: chr26:23605069-23604878 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 82

Conread position: 5-483
Cow position: chr26:9563524-9563050 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-490
Cow position: chr26:4605348-4604873 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 5-496
Cow position: chr26:15144923-15144438 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 28

Conread position: 5-502
Cow position: chr26:11254223-11253729 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr26:12588731-12588238 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 5-528
Cow position: chr26:18854922-18855447 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr26:2198461-2198996 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 8-486
Cow position: chr26:3691643-3692102 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 14-501
Cow position: chr26:12656138-12656598 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 17

Conread position: 18-477
Cow position: chr26:30589526-30589070 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 15

Conread position: 24-202
Cow position: chr26:12659837-12659661 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 25-240
Cow position: chr26:9845759-9845547 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 64-505
Cow position: chr26:9118214-9118649 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 276
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 19

Conread position: 87-486
Cow position: chr26:3030916-3030518 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 101-504
Cow position: chr26:30782668-30783076 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 236

Conread position: 141-489
Cow position: chr26:8918818-8919164 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 189-581
Cow position: chr26:12666123-12666508 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 37

Conread position: 195-806
Cow position: chr26:9845555-9844974 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 30

Conread position: 199-613
Cow position: chr26:9849898-9849483 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 14

Conread position: 199-613
Cow position: chr26:9853408-9852994 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 14

Conread position: 203-567
Cow position: chr26:8283032-8282670 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 138

Conread position: 671-806
Cow position: chr26:12656612-12656747 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-473
Cow position: chr27:23334930-23335413 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 32

Conread position: 1-483
Cow position: chr27:26324581-26325060 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 30

Conread position: 1-502
Cow position: chr27:15541095-15541593 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chr27:15278298-15277808 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 86

Conread position: 1-503
Cow position: chr27:25002760-25002270 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 25

Conread position: 1-522
Cow position: chr27:14460690-14460170 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 32

Conread position: 1-526
Cow position: chr27:1209118-1209639 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr27:27662661-27663183 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 32

Conread position: 1-540
Cow position: chr27:25805114-25804592 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 430, 32

Conread position: 4-483
Cow position: chr27:9993435-9992958 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 18

Conread position: 5-503
Cow position: chr27:27051435-27051949 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 25

Conread position: 5-541
Cow position: chr27:16034622-16034087 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 18-483
Cow position: chr27:892993-893452 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 21-503
Cow position: chr27:16439111-16439593 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 7

Conread position: 109-497
Cow position: chr27:27753324-27752937 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 0

Conread position: 156-581
Cow position: chr27:26035136-26034718 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 209

Conread position: 217-806
Cow position: chr27:26556024-26555425 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 131

Conread position: 233-716
Cow position: chr27:8561540-8562019 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 70

Conread position: 1-184
Cow position: chr28:5752066-5751884 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 113, 32

Conread position: 1-185
Cow position: chr28:34593654-34593832 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 1-211
Cow position: chr28:15681704-15681906 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 1-470
Cow position: chr28:22261340-22260874 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-481
Cow position: chr28:14705860-14705384 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 1-483
Cow position: chr28:13459782-13460259 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr28:15378181-15377703 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chr28:1387580-1387091 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-503
Cow position: chr28:2591730-2592224 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-503
Cow position: chr28:7001799-7002299 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 32

Conread position: 1-503
Cow position: chr28:9953946-9954442 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-526
Cow position: chr28:32792568-32792048 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 32

Conread position: 1-558
Cow position: chr28:7901165-7901737 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 20

Conread position: 1-801
Cow position: chr28:5812521-5813286 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 27

Conread position: 1-806
Cow position: chr28:21358831-21359618 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 670, 20

Conread position: 2-185
Cow position: chr28:1168352-1168174 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 2-246
Cow position: chr28:17330709-17330473 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 160, 24

Conread position: 2-482
Cow position: chr28:2083416-2083884 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 4-346
Cow position: chr28:26426460-26426124 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 5-356
Cow position: chr28:15950796-15951142 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-470
Cow position: chr28:17667697-17667237 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position: chr28:8378382-8378858 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 20

Conread position: 5-483
Cow position: chr28:17388296-17388771 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-503
Cow position: chr28:9155470-9154974 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 25

Conread position: 5-503
Cow position: chr28:24667396-24667888 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 26

Conread position: 5-504
Cow position: chr28:1952948-1953444 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 16

Conread position: 5-541
Cow position: chr28:7822069-7822609 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 84

Conread position: 5-541
Cow position: chr28:14750363-14750898 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr28:24587248-24587786 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 28

Conread position: 5-606
Cow position: chr28:21325604-21326192 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 14

Conread position: 6-209
Cow position: chr28:2989866-2989672 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 7-489
Cow position: chr28:1815051-1814572 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 13-477
Cow position: chr28:1504678-1505135 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 14-480
Cow position: chr28:12410386-12409938 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 458, 19

Conread position: 14-483
Cow position: chr28:5114976-5114522 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 15-219
Cow position: chr28:15035671-15035470 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 18-538
Cow position: chr28:8721617-8721107 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 13

Conread position: 24-363
Cow position: chr28:7817055-7817373 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 69, 7

Conread position: 24-618
Cow position: chr28:10619274-10618699 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 64

Conread position: 49-806
Cow position: chr28:7790440-7789669 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 311

Conread position: 64-496
Cow position: chr28:9137179-9136749 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 65

Conread position: 87-287
Cow position: chr28:22233794-22233595 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 152, 0

Conread position: 90-503
Cow position: chr28:2724993-2724581 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 250

Conread position: 141-503
Cow position: chr28:4380890-4380535 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 229-719
Cow position: chr28:2989679-2989183 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 12

Conread position: 230-795
Cow position: chr28:5797470-5798029 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 73

Conread position: 232-501
Cow position: chr28:18181110-18180849 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 116, 0

Conread position: 242-502
Cow position: chr28:17324301-17324036 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 106

Conread position: 279-573
Cow position: chr28:10463066-10462770 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 297-506
Cow position: chr28:22233293-22233083 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 194, 51

Conread position: 297-806
Cow position: chr28:10071089-10071566 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 319-503
Cow position: chr28:13490277-13490462 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 153
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 173, 29

Conread position: 389-620
Cow position: chr28:11357518-11357290 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 142, 161

Conread position: 413-537
Cow position: chr28:2886525-2886648 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 434-806
Cow position: chr28:7817379-7817748 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 134

Conread position: 448-806
Cow position: chr28:5764501-5764841 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 104

Conread position: 506-806
Cow position: chr28:28117808-28118111 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 165, 40

Conread position: 591-806
Cow position: chr28:11356989-11356772 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 662-806
Cow position: chr28:24704369-24704514 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 1-197
Cow position: chr29:17662698-17662894 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 86

Conread position: 1-323
Cow position: chr29:21427278-21426962 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-329
Cow position: chr29:21246345-21246672 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 1-477
Cow position: chr29:38226770-38227229 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 32

Conread position: 1-482
Cow position: chr29:7431439-7430965 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-482
Cow position: chr29:45459496-45459970 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 423, 24

Conread position: 1-483
Cow position: chr29:10824182-10823714 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 88

Conread position: 1-483
Cow position: chr29:19623467-19622992 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-483
Cow position: chr29:19652885-19653363 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 32

Conread position: 1-483
Cow position: chr29:25932767-25932289 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-483
Cow position: chr29:43322336-43322810 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-489
Cow position: chr29:40503202-40502721 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 32

Conread position: 1-496
Cow position: chr29:16769909-16770392 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 30

Conread position: 1-503
Cow position: chr29:2841588-2841098 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 20

Conread position: 1-503
Cow position: chr29:11049061-11049553 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position: chr29:27040983-27040497 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 27

Conread position: 1-523
Cow position: chr29:32539587-32540105 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 32

Conread position: 1-526
Cow position: chr29:2689682-2690198 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 27

Conread position: 1-526
Cow position: chr29:10648468-10647953 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-526
Cow position: chr29:20250936-20251457 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-586
Cow position: chr29:1715028-1715599 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 22

Conread position: 2-503
Cow position: chr29:35196455-35196939 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 5-161
Cow position: chr29:13578198-13578353 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 28

Conread position: 5-315
Cow position: chr29:31180904-31181212 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-350
Cow position: chr29:28060885-28060541 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 28

Conread position: 5-428
Cow position: chr29:32315821-32316241 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position: chr29:39079925-39079457 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-486
Cow position: chr29:15895067-15894592 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-489
Cow position: chr29:7840577-7841057 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr29:27250554-27250068 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-504
Cow position: chr29:610830-610332 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 26

Conread position: 5-526
Cow position: chr29:2099625-2100143 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 5-526
Cow position: chr29:6266713-6266203 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 7-205
Cow position: chr29:31121588-31121784 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 7-482
Cow position: chr29:5957386-5957858 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 24

Conread position: 8-476
Cow position: chr29:10848327-10847844 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 23

Conread position: 8-503
Cow position: chr29:21543582-21543094 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 10-581
Cow position: chr29:104361-104913 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 520, 18

Conread position: 18-489
Cow position: chr29:35296668-35297135 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 15

Conread position: 25-503
Cow position: chr29:43366196-43365727 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 7

Conread position: 28-515
Cow position: chr29:2750591-2750134 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 60

Conread position: 40-505
Cow position: chr29:19884883-19885351 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 48

Conread position: 58-489
Cow position: chr29:27981085-27980658 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 74-249
Cow position: chr29:43791030-43791202 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 84-526
Cow position: chr29:14585785-14586220 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 110-573
Cow position: chr29:803468-803007 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 132-489
Cow position: chr29:18857039-18856683 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 141-470
Cow position: chr29:42650199-42650528 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 172

Conread position: 312-586
Cow position: chr29:24709163-24708892 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 104, 36

Conread position: 319-503
Cow position: chr29:21426932-21426755 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 151
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 29, 0

Conread position: 363-806
Cow position: chr29:14086313-14085880 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 42

Conread position: 368-701
Cow position: chr29:5983069-5982737 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 250

Conread position: 424-628
Cow position: chr29:8331136-8330939 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 426-586
Cow position: chr29:13648882-13649038 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 74

Conread position: 513-667
Cow position: chr29:2749931-2749782 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 103

Conread position: 1-203
Cow position: chr3:49677454-49677651 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 1-243
Cow position: chr3:17952056-17952298 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 216, 29

Conread position: 1-452
Cow position: chr3:5047489-5047042 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-457
Cow position: chr3:23291710-23291256 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 32

Conread position: 1-458
Cow position: chr3:15989341-15988879 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 32

Conread position: 1-477
Cow position: chr3:5883235-5883706 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-478
Cow position: chr3:70083949-70083486 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 27

Conread position: 1-479
Cow position: chr3:64017669-64017195 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 32

Conread position: 1-483
Cow position: chr3:40823083-40823560 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 29

Conread position: 1-483
Cow position: chr3:57485029-57484557 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr3:72629766-72630243 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-489
Cow position: chr3:18811198-18811679 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 10

Conread position: 1-500
Cow position: chr3:42580270-42579779 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-502
Cow position: chr3:59861060-59861558 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chr3:207465-206968 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 29

Conread position: 1-503
Cow position: chr3:2633623-2634113 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr3:2653805-2654295 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-503
Cow position: chr3:5829934-5829436 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr3:9716506-9717003 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 29

Conread position: 1-503
Cow position: chr3:57499819-57499353 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 40

Conread position: 1-503
Cow position: chr3:66119351-66119848 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr3:66638434-66638933 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr3:77474457-77474955 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 30

Conread position: 1-504
Cow position: chr3:472231-472726 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-526
Cow position: chr3:18542713-18542192 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr3:21182987-21182471 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 24

Conread position: 1-526
Cow position: chr3:26949209-26949728 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 29

Conread position: 1-526
Cow position: chr3:48061132-48060616 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr3:69933092-69933610 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr3:78027716-78027194 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-538
Cow position: chr3:36127086-36127621 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 1-581
Cow position: chr3:32842731-32842184 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 29

Conread position: 1-693
Cow position: chr3:6685156-6685830 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 29

Conread position: 1-798
Cow position: chr3:64358470-64357678 (view UCSC Genome Browser custom track)
Alignm length: 810
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 1-804
Cow position: chr3:66990498-66991253 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 670, 30

Conread position: 2-191
Cow position: chr3:36691492-36691311 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 2-503
Cow position: chr3:31898277-31897784 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 29

Conread position: 2-503
Cow position: chr3:55229998-55229508 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 28

Conread position: 2-538
Cow position: chr3:42431928-42432461 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 82

Conread position: 2-569
Cow position: chr3:3054308-3054853 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 556, 11

Conread position: 4-499
Cow position: chr3:58947153-58947646 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 27

Conread position: 5-159
Cow position: chr3:52865050-52864899 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 5-310
Cow position: chr3:4285584-4285887 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-403
Cow position: chr3:46678214-46677821 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-414
Cow position: chr3:57856435-57856841 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-429
Cow position: chr3:17828948-17828530 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-483
Cow position: chr3:19757261-19756786 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position: chr3:56340721-56340254 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 5-489
Cow position: chr3:2917161-2917640 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr3:64028384-64027894 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-503
Cow position: chr3:31354555-31354072 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 5-504
Cow position: chr3:6782089-6782582 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 16

Conread position: 5-541
Cow position: chr3:19878361-19878892 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr3:22335591-22336123 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr3:24314177-24314702 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 28

Conread position: 5-541
Cow position: chr3:47081959-47081423 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 28

Conread position: 5-544
Cow position: chr3:45032440-45032979 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-564
Cow position: chr3:46861599-46861046 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-593
Cow position: chr3:45775370-45774815 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 440, 21

Conread position: 6-232
Cow position: chr3:57900915-57901139 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 6-476
Cow position: chr3:19943763-19944216 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 6-497
Cow position: chr3:66891262-66890776 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 27

Conread position: 6-593
Cow position: chr3:14754596-14754015 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 24

Conread position: 10-311
Cow position: chr3:63005445-63005144 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 18

Conread position: 10-504
Cow position: chr3:64650335-64650824 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 423, 23

Conread position: 13-483
Cow position: chr3:34031190-34030726 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 14-577
Cow position: chr3:54783251-54783814 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 14

Conread position: 14-716
Cow position: chr3:29594911-29595599 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 16

Conread position: 15-479
Cow position: chr3:7168503-7168962 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 17-581
Cow position: chr3:49333109-49333654 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 84

Conread position: 18-361
Cow position: chr3:37968793-37969130 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-489
Cow position: chr3:56321027-56321494 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 70

Conread position: 18-565
Cow position: chr3:60210466-60209932 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 13

Conread position: 21-205
Cow position: chr3:56650556-56650372 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 66

Conread position: 21-431
Cow position: chr3:32146373-32145971 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 21-523
Cow position: chr3:45869494-45869003 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 471, 37

Conread position: 23-489
Cow position: chr3:7159015-7158554 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 23-502
Cow position: chr3:36117390-36117855 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 23-504
Cow position: chr3:5995981-5995503 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 48

Conread position: 23-593
Cow position: chr3:4026987-4027557 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 65

Conread position: 25-256
Cow position: chr3:39326404-39326631 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 62

Conread position: 28-593
Cow position: chr3:36098983-36098434 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 15

Conread position: 29-504
Cow position: chr3:54785488-54785954 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 316
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 138, 14

Conread position: 31-483
Cow position: chr3:18463862-18463420 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 33-483
Cow position: chr3:594304-594749 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 33-719
Cow position: chr3:48231264-48230602 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 54

Conread position: 34-504
Cow position: chr3:18859149-18859612 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 23

Conread position: 35-347
Cow position: chr3:13274212-13273900 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 202
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 213

Conread position: 43-337
Cow position: chr3:14634376-14634084 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 45-254
Cow position: chr3:47273244-47273048 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 42

Conread position: 46-482
Cow position: chr3:53515358-53515785 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 65-526
Cow position: chr3:66619936-66620388 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 431, 21

Conread position: 72-701
Cow position: chr3:19802424-19803041 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 593, 15

Conread position: 100-619
Cow position: chr3:39326514-39327025 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 40

Conread position: 101-585
Cow position: chr3:34093655-34093171 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 23

Conread position: 111-806
Cow position: chr3:52864671-52863973 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 41

Conread position: 141-538
Cow position: chr3:23214229-23213834 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 141-563
Cow position: chr3:26822661-26822248 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 47

Conread position: 170-520
Cow position: chr3:77423542-77423882 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 177

Conread position: 173-503
Cow position: chr3:49677651-49677979 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 189-613
Cow position: chr3:2908474-2908064 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 16

Conread position: 311-556
Cow position: chr3:26837760-26837520 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 37

Conread position: 316-719
Cow position: chr3:63004726-63004335 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 32

Conread position: 316-803
Cow position: chr3:24591615-24591156 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 32

Conread position: 331-663
Cow position: chr3:14632676-14632349 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 399-544
Cow position: chr3:63241688-63241542 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 131, 0

Conread position: 1-197
Cow position: chr4:12608005-12607812 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 46, 27

Conread position: 1-205
Cow position: chr4:10408280-10408482 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 0

Conread position: 1-259
Cow position: chr4:51044381-51044143 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 1-483
Cow position: chr4:6490847-6490387 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr4:17926755-17926277 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 1-483
Cow position: chr4:24445700-24445229 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr4:43880608-43881086 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr4:44724582-44725061 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-489
Cow position: chr4:47718110-47717623 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 86

Conread position: 1-500
Cow position: chr4:40824744-40824258 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-525
Cow position: chr4:66179487-66178968 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-526
Cow position: chr4:12241720-12241197 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 32

Conread position: 1-526
Cow position: chr4:36895873-36896388 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr4:43320137-43319626 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr4:45049796-45049278 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 1-532
Cow position: chr4:13492075-13492597 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 527, 32

Conread position: 1-586
Cow position: chr4:11393837-11393264 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 29

Conread position: 1-674
Cow position: chr4:66925503-66926163 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 29

Conread position: 1-701
Cow position: chr4:21338487-21337815 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 30

Conread position: 1-802
Cow position: chr4:46663703-46664474 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 27

Conread position: 1-806
Cow position: chr4:28830539-28831319 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 30

Conread position: 5-204
Cow position: chr4:23114673-23114476 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 5-443
Cow position: chr4:4905657-4906084 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-472
Cow position: chr4:528496-528960 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position: chr4:355417-355887 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 5-483
Cow position: chr4:3961098-3961569 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-483
Cow position: chr4:41330943-41331416 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 28

Conread position: 5-502
Cow position: chr4:13547531-13548026 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 28

Conread position: 5-504
Cow position: chr4:1931117-1930621 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-504
Cow position: chr4:30307950-30307456 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 16

Conread position: 5-539
Cow position: chr4:6269125-6268594 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 482, 28

Conread position: 5-541
Cow position: chr4:3125284-3125835 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 28

Conread position: 6-489
Cow position: chr4:47764666-47764187 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 7-541
Cow position: chr4:158021-158555 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 26

Conread position: 8-569
Cow position: chr4:15193544-15194117 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 20

Conread position: 13-585
Cow position: chr4:8598627-8598078 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 523, 18

Conread position: 14-503
Cow position: chr4:11618371-11618848 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 73

Conread position: 14-523
Cow position: chr4:57979143-57979645 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 15-489
Cow position: chr4:33073584-33073126 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 17-325
Cow position: chr4:31668830-31669129 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 18-496
Cow position: chr4:16056120-16056593 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 475, 15

Conread position: 18-502
Cow position: chr4:602510-602990 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 21-806
Cow position: chr4:1464407-1463633 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 7

Conread position: 23-182
Cow position: chr4:54190376-54190533 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 23-693
Cow position: chr4:34185343-34184718 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 64

Conread position: 28-489
Cow position: chr4:5879696-5880149 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 28-489
Cow position: chr4:27332969-27333419 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 5

Conread position: 30-509
Cow position: chr4:22471716-22472172 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 309
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 141, 53

Conread position: 59-571
Cow position: chr4:17530862-17530366 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 84-701
Cow position: chr4:60264980-60264371 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 588, 16

Conread position: 92-483
Cow position: chr4:41119600-41119991 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 187

Conread position: 176-503
Cow position: chr4:61256568-61256889 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 216-526
Cow position: chr4:26749175-26748879 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 53, 113

Conread position: 273-572
Cow position: chr4:11384728-11385022 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 75

Conread position: 312-503
Cow position: chr4:10408485-10408671 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 96, 36

Conread position: 474-701
Cow position: chr4:54955717-54955940 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 56, 132

Conread position: 1-243
Cow position: chr5:4384823-4385060 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 1-387
Cow position: chr5:25207145-25206764 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 24

Conread position: 1-470
Cow position: chr5:10918391-10918857 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-477
Cow position: chr5:30578916-30579388 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-481
Cow position: chr5:37731939-37732416 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr5:2430539-2430060 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr5:4068584-4069060 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr5:49518260-49518730 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-499
Cow position: chr5:32674142-32673652 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 27

Conread position: 1-503
Cow position: chr5:27652397-27651890 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 97

Conread position: 1-503
Cow position: chr5:29008953-29009445 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 415, 29

Conread position: 1-503
Cow position: chr5:39165203-39164708 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position: chr5:41551331-41550834 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 29

Conread position: 1-526
Cow position: chr5:24098242-24098764 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr5:64782423-64781903 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-528
Cow position: chr5:55627598-55628103 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 1-532
Cow position: chr5:46738991-46738466 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 527, 32

Conread position: 1-536
Cow position: chr5:32733651-32733123 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 29

Conread position: 1-587
Cow position: chr5:46630831-46630273 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-702
Cow position: chr5:49593865-49593163 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 90

Conread position: 1-759
Cow position: chr5:46659318-46660063 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 18

Conread position: 2-468
Cow position: chr5:31102002-31101554 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 29

Conread position: 3-282
Cow position: chr5:27569746-27570027 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 27

Conread position: 4-503
Cow position: chr5:34202543-34203027 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 26

Conread position: 5-180
Cow position: chr5:35299661-35299834 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 5-326
Cow position: chr5:46005786-46005460 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 29

Conread position: 5-332
Cow position: chr5:53714854-53715176 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-363
Cow position: chr5:18665559-18665914 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-483
Cow position: chr5:416122-415650 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 5-483
Cow position: chr5:48809115-48808643 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 5-489
Cow position: chr5:2530868-2531349 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 5-489
Cow position: chr5:14379760-14380240 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr5:29042109-29042589 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr5:24576511-24577006 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 28

Conread position: 5-502
Cow position: chr5:44459080-44459574 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr5:48468679-48468188 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr5:59481852-59482344 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-503
Cow position: chr5:45699878-45700358 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 74

Conread position: 5-503
Cow position: chr5:49181879-49182361 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 23

Conread position: 5-504
Cow position: chr5:4019601-4019101 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-504
Cow position: chr5:26079621-26079124 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-504
Cow position: chr5:31706172-31706671 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 28

Conread position: 5-504
Cow position: chr5:32772079-32772579 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-523
Cow position: chr5:32945478-32945988 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 26

Conread position: 5-526
Cow position: chr5:57482949-57482431 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-541
Cow position: chr5:47831507-47830979 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-581
Cow position: chr5:23227858-23228396 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 384
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 219, 23

Conread position: 6-303
Cow position: chr5:10844276-10843981 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 6-481
Cow position: chr5:7273464-7273898 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 6-496
Cow position: chr5:26769409-26769890 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 24

Conread position: 9-503
Cow position: chr5:9686812-9686335 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 21

Conread position: 14-248
Cow position: chr5:18653614-18653844 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 138
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 14-583
Cow position: chr5:51162523-51163075 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 508, 16

Conread position: 18-497
Cow position: chr5:27909660-27909186 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-541
Cow position: chr5:59060232-59060752 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 15

Conread position: 21-500
Cow position: chr5:28022774-28023242 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 32

Conread position: 21-541
Cow position: chr5:6589408-6588886 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 12

Conread position: 23-573
Cow position: chr5:41529957-41529428 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 476, 64

Conread position: 28-504
Cow position: chr5:45182489-45182006 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 13

Conread position: 31-502
Cow position: chr5:46644323-46644780 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 460, 56

Conread position: 31-526
Cow position: chr5:41962612-41962123 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 33-395
Cow position: chr5:4088427-4088789 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 56

Conread position: 48-460
Cow position: chr5:61273540-61273138 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 64-573
Cow position: chr5:26069058-26068566 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 454, 24

Conread position: 82-419
Cow position: chr5:58819962-58819626 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 103-409
Cow position: chr5:5318063-5317759 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 118-585
Cow position: chr5:52433682-52434141 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 86

Conread position: 160-503
Cow position: chr5:20972282-20971954 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 191-485
Cow position: chr5:57977037-57977332 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 160

Conread position: 195-593
Cow position: chr5:39247597-39247228 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 112

Conread position: 225-585
Cow position: chr5:27489063-27489422 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 46

Conread position: 246-577
Cow position: chr5:51771462-51771127 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 88, 300

Conread position: 273-503
Cow position: chr5:4385120-4385338 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 297-496
Cow position: chr5:27570000-27570197 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 327-612
Cow position: chr5:18117659-18117383 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 357-593
Cow position: chr5:27059178-27058939 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 157

Conread position: 357-593
Cow position: chr5:27060081-27059842 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 157

Conread position: 372-503
Cow position: chr5:6611972-6612103 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 372-775
Cow position: chr5:40053420-40053803 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 62

Conread position: 388-573
Cow position: chr5:7502933-7502748 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 23

Conread position: 474-806
Cow position: chr5:61272799-61272488 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 25, 36

Conread position: 534-806
Cow position: chr5:41962151-41961871 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 52, 9

Conread position: 621-805
Cow position: chr5:41528879-41528694 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 51, 74

Conread position: 1-203
Cow position: chr6:6476719-6476519 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 0

Conread position: 1-203
Cow position: chr6:21686631-21686823 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 1-210
Cow position: chr6:47043696-47043489 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 1-226
Cow position: chr6:65909162-65909382 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 1-232
Cow position: chr6:42359946-42359716 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 88

Conread position: 1-255
Cow position: chr6:1823511-1823264 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 1-274
Cow position: chr6:39437379-39437647 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 1-321
Cow position: chr6:50497723-50497405 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-340
Cow position: chr6:68362580-68362250 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-427
Cow position: chr6:42927122-42927540 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-470
Cow position: chr6:5951501-5951045 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-477
Cow position: chr6:27530263-27529799 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-478
Cow position: chr6:3278215-3277741 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr6:15141439-15140966 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 24

Conread position: 1-483
Cow position: chr6:15280807-15280338 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 1-483
Cow position: chr6:17045800-17046269 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 24

Conread position: 1-483
Cow position: chr6:30275447-30274965 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 88

Conread position: 1-483
Cow position: chr6:35876981-35876504 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr6:55544591-55544113 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-489
Cow position: chr6:58409174-58408692 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-503
Cow position: chr6:19453664-19454149 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 23

Conread position: 1-503
Cow position: chr6:27468994-27469481 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-503
Cow position: chr6:36525778-36526280 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 32

Conread position: 1-524
Cow position: chr6:13317748-13317244 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 511, 24

Conread position: 1-526
Cow position: chr6:8761565-8761048 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr6:34893274-34892749 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 32

Conread position: 1-532
Cow position: chr6:65841330-65841842 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-541
Cow position: chr6:2374442-2374977 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 32

Conread position: 1-750
Cow position: chr6:37115873-37116603 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 1-799
Cow position: chr6:38232011-38232814 (view UCSC Genome Browser custom track)
Alignm length: 815
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 29

Conread position: 2-483
Cow position: chr6:6566349-6566819 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 2-537
Cow position: chr6:3889743-3889218 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 470, 31

Conread position: 5-182
Cow position: chr6:39907889-39908064 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 5-190
Cow position: chr6:45672004-45672187 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 5-251
Cow position: chr6:40274998-40275242 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 5-425
Cow position: chr6:57870264-57869847 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 28

Conread position: 5-443
Cow position: chr6:21971413-21971860 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 28

Conread position: 5-483
Cow position: chr6:913371-913867 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 20

Conread position: 5-489
Cow position: chr6:2554447-2554926 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr6:34127091-34127573 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 28

Conread position: 5-496
Cow position: chr6:26671121-26670630 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 16

Conread position: 5-496
Cow position: chr6:65822387-65821898 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 488, 28

Conread position: 5-503
Cow position: chr6:65927679-65928170 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-504
Cow position: chr6:43617456-43617954 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-528
Cow position: chr6:1405497-1404973 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr6:7141732-7141211 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chr6:44150818-44150280 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 28

Conread position: 5-541
Cow position: chr6:68026522-68027068 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 26

Conread position: 5-586
Cow position: chr6:59741309-59740741 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 23

Conread position: 6-486
Cow position: chr6:13276543-13277017 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 26

Conread position: 6-525
Cow position: chr6:59919538-59919023 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 24

Conread position: 7-483
Cow position: chr6:65880608-65881081 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 14-489
Cow position: chr6:33459612-33460083 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 14

Conread position: 15-532
Cow position: chr6:40554843-40554326 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 18

Conread position: 18-504
Cow position: chr6:17598527-17598040 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 475, 15

Conread position: 19-593
Cow position: chr6:35420826-35420286 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 515, 11

Conread position: 21-452
Cow position: chr6:11277946-11277513 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 67

Conread position: 21-485
Cow position: chr6:16051642-16052096 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 21-532
Cow position: chr6:30478847-30479362 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 10

Conread position: 23-489
Cow position: chr6:13846803-13847252 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 23-503
Cow position: chr6:33388590-33389076 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 64

Conread position: 28-263
Cow position: chr6:65900157-65899926 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 30

Conread position: 28-393
Cow position: chr6:49520637-49520256 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 40

Conread position: 28-561
Cow position: chr6:7179917-7179401 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 58

Conread position: 33-470
Cow position: chr6:28274750-28275183 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 64-483
Cow position: chr6:24238862-24239279 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 22

Conread position: 113-568
Cow position: chr6:32330947-32330496 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 237

Conread position: 116-593
Cow position: chr6:51190363-51190818 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 8

Conread position: 118-480
Cow position: chr6:25214110-25214469 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 9

Conread position: 225-571
Cow position: chr6:25359463-25359813 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 203

Conread position: 225-806
Cow position: chr6:6476525-6475956 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 444, 82

Conread position: 344-614
Cow position: chr6:10641235-10641505 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 57

Conread position: 346-807
Cow position: chr6:43608281-43607825 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 134

Conread position: 360-586
Cow position: chr6:52805122-52805342 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 77, 45

Conread position: 377-646
Cow position: chr6:14853365-14853113 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 53

Conread position: 536-806
Cow position: chr6:42616395-42616660 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 60

Conread position: 591-759
Cow position: chr6:35419833-35419664 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 1-160
Cow position: chr7:21241967-21241814 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 1-203
Cow position: chr7:67426244-67426442 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 1-325
Cow position: chr7:68436220-68435898 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 29

Conread position: 1-412
Cow position: chr7:6489483-6489086 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 27

Conread position: 1-480
Cow position: chr7:54602676-54603152 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-482
Cow position: chr7:39791563-39792058 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 86

Conread position: 1-483
Cow position: chr7:8145412-8144940 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 32

Conread position: 1-483
Cow position: chr7:10431599-10431114 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 90

Conread position: 1-483
Cow position: chr7:14139771-14139297 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr7:21235186-21234708 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 32

Conread position: 1-483
Cow position: chr7:24808642-24808163 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr7:46902251-46901777 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr7:64242114-64241644 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 24

Conread position: 1-486
Cow position: chr7:994060-994537 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 1-503
Cow position: chr7:5662201-5662697 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 32

Conread position: 1-503
Cow position: chr7:21975910-21975423 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr7:41489944-41490433 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chr7:67416869-67417366 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 30

Conread position: 1-504
Cow position: chr7:52120255-52119760 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 28

Conread position: 1-522
Cow position: chr7:55538091-55537575 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 1-526
Cow position: chr7:1372824-1372305 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 1-575
Cow position: chr7:58378370-58377819 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 98

Conread position: 1-576
Cow position: chr7:102774-102189 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 67

Conread position: 1-593
Cow position: chr7:39556262-39555682 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 530, 10

Conread position: 1-593
Cow position: chr7:55280973-55280390 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 27

Conread position: 1-593
Cow position: chr7:63020678-63021254 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 529, 29

Conread position: 1-598
Cow position: chr7:21310033-21310623 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 1-806
Cow position: chr7:51013795-51014559 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 18

Conread position: 1-806
Cow position: chr7:53990567-53991360 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 2-483
Cow position: chr7:26893576-26894072 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 31

Conread position: 2-483
Cow position: chr7:33406417-33405938 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 31

Conread position: 2-538
Cow position: chr7:446807-446274 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 19

Conread position: 2-806
Cow position: chr7:3154608-3155413 (view UCSC Genome Browser custom track)
Alignm length: 833
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 33

Conread position: 5-349
Cow position: chr7:47374826-47375168 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-431
Cow position: chr7:26025865-26026287 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 85

Conread position: 5-481
Cow position: chr7:1357836-1357384 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 5-484
Cow position: chr7:20555547-20556019 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 16

Conread position: 5-485
Cow position: chr7:7257037-7257499 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 28

Conread position: 5-489
Cow position: chr7:6643043-6642567 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 28

Conread position: 5-499
Cow position: chr7:30119708-30119236 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 319
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 309, 23

Conread position: 5-502
Cow position: chr7:21319985-21320479 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr7:23816138-23815647 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-502
Cow position: chr7:61559042-61559536 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-504
Cow position: chr7:11466905-11466410 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 28

Conread position: 5-504
Cow position: chr7:27102281-27101789 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 28

Conread position: 5-539
Cow position: chr7:6648825-6648291 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 28

Conread position: 5-541
Cow position: chr7:3234854-3234317 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 28

Conread position: 5-568
Cow position: chr7:20528845-20528286 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 26

Conread position: 6-173
Cow position: chr7:522014-521849 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 8-504
Cow position: chr7:3301322-3300829 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 25

Conread position: 10-593
Cow position: chr7:47050537-47051098 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 521, 20

Conread position: 14-483
Cow position: chr7:13537745-13537280 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 15-323
Cow position: chr7:68778526-68778231 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 72

Conread position: 15-514
Cow position: chr7:68907686-68908162 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 18-187
Cow position: chr7:24421676-24421841 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 21-195
Cow position: chr7:29469706-29469881 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 12

Conread position: 21-295
Cow position: chr7:545059-545327 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 21-503
Cow position: chr7:63385195-63385664 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 13

Conread position: 21-616
Cow position: chr7:35287718-35287122 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 67

Conread position: 23-569
Cow position: chr7:27126012-27126547 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 65

Conread position: 24-470
Cow position: chr7:27786471-27786912 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 25-571
Cow position: chr7:3729824-3730367 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 63

Conread position: 26-550
Cow position: chr7:68479016-68479540 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 60

Conread position: 28-483
Cow position: chr7:21127806-21127359 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 31-563
Cow position: chr7:1611354-1610821 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 57

Conread position: 34-485
Cow position: chr7:20799582-20799140 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 38-419
Cow position: chr7:38536379-38536748 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 43-496
Cow position: chr7:1449350-1449800 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 44

Conread position: 44-340
Cow position: chr7:27144194-27144487 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 45-790
Cow position: chr7:29370711-29369989 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 41

Conread position: 51-564
Cow position: chr7:67484149-67484655 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 37

Conread position: 56-483
Cow position: chr7:34148972-34149402 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 14

Conread position: 74-503
Cow position: chr7:35297374-35296944 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 12

Conread position: 93-694
Cow position: chr7:68778231-68777650 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 96

Conread position: 113-573
Cow position: chr7:27540422-27539971 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 8

Conread position: 132-500
Cow position: chr7:27585141-27584789 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 249
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 227, 20

Conread position: 132-573
Cow position: chr7:58993153-58993584 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 174

Conread position: 143-473
Cow position: chr7:33878400-33878077 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 154-540
Cow position: chr7:68858134-68857751 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 45

Conread position: 167-806
Cow position: chr7:39108239-39107627 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 38

Conread position: 189-612
Cow position: chr7:68478455-68478876 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 46

Conread position: 224-586
Cow position: chr7:52804667-52804314 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 13

Conread position: 234-790
Cow position: chr7:29470179-29470725 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 437, 119

Conread position: 273-563
Cow position: chr7:68232035-68232328 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 82

Conread position: 278-665
Cow position: chr7:24934864-24934485 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 282-573
Cow position: chr7:49290764-49291056 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 0

Conread position: 358-523
Cow position: chr7:27147429-27147594 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 139, 14

Conread position: 365-699
Cow position: chr7:54196071-54195748 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 234

Conread position: 373-568
Cow position: chr7:1735332-1735130 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 421-593
Cow position: chr7:6489096-6488923 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 110, 0

Conread position: 621-805
Cow position: chr7:68908428-68908612 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 51, 148

Conread position: 630-806
Cow position: chr7:4415487-4415665 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 1-159
Cow position: chr8:60060217-60060372 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 1-192
Cow position: chr8:44121895-44122080 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 1-204
Cow position: chr8:29440814-29440612 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 184, 32

Conread position: 1-221
Cow position: chr8:45795731-45795513 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 1-316
Cow position: chr8:44077004-44076718 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 1-395
Cow position: chr8:53427341-53427724 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-429
Cow position: chr8:25407461-25407882 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-429
Cow position: chr8:36637644-36637221 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-453
Cow position: chr8:11801248-11801695 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 32

Conread position: 1-461
Cow position: chr8:8910239-8910690 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 24

Conread position: 1-470
Cow position: chr8:25522411-25522879 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 32

Conread position: 1-470
Cow position: chr8:27983785-27983319 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 29

Conread position: 1-470
Cow position: chr8:47885039-47885507 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 29

Conread position: 1-476
Cow position: chr8:3857001-3856532 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-482
Cow position: chr8:39196203-39195727 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 32

Conread position: 1-483
Cow position: chr8:10743613-10743139 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-483
Cow position: chr8:44244562-44244082 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 32

Conread position: 1-483
Cow position: chr8:47662313-47661834 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-483
Cow position: chr8:50993801-50994279 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-483
Cow position: chr8:59262881-59262402 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-496
Cow position: chr8:11821329-11821817 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 32

Conread position: 1-500
Cow position: chr8:45189106-45189592 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 86

Conread position: 1-503
Cow position: chr8:19050500-19050989 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 34

Conread position: 1-503
Cow position: chr8:32930523-32931021 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 88

Conread position: 1-503
Cow position: chr8:44036763-44036267 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 27

Conread position: 1-503
Cow position: chr8:45317110-45316614 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 30

Conread position: 1-526
Cow position: chr8:3784723-3785244 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr8:5016195-5016715 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr8:36636529-36636010 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr8:38390380-38390902 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chr8:42483940-42484446 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-572
Cow position: chr8:11055888-11056448 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 29

Conread position: 1-582
Cow position: chr8:45448465-45449053 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 27

Conread position: 1-806
Cow position: chr8:44693308-44694086 (view UCSC Genome Browser custom track)
Alignm length: 813
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 29

Conread position: 1-806
Cow position: chr8:61035352-61034538 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 29

Conread position: 2-483
Cow position: chr8:2171365-2170888 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-483
Cow position: chr8:8229770-8229290 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 85

Conread position: 2-483
Cow position: chr8:33588392-33588865 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-504
Cow position: chr8:2885758-2886267 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 31

Conread position: 3-804
Cow position: chr8:11970546-11969791 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 668, 27

Conread position: 5-162
Cow position: chr8:26006750-26006595 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 5-219
Cow position: chr8:36292187-36292397 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 5-223
Cow position: chr8:46945107-46944897 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 0

Conread position: 5-249
Cow position: chr8:12505014-12505253 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr8:1154291-1153810 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr8:27578424-27578899 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr8:32632006-32631530 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr8:47069790-47069308 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr8:8656199-8655708 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 28

Conread position: 5-502
Cow position: chr8:47074286-47074778 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 5-504
Cow position: chr8:22572278-22571779 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-585
Cow position: chr8:23766370-23765813 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 526, 28

Conread position: 6-468
Cow position: chr8:14928975-14928517 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 28

Conread position: 6-806
Cow position: chr8:24420509-24419716 (view UCSC Genome Browser custom track)
Alignm length: 816
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 81

Conread position: 14-574
Cow position: chr8:13808625-13809184 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 69

Conread position: 18-449
Cow position: chr8:46091832-46091412 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-502
Cow position: chr8:9275049-9275521 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-503
Cow position: chr8:25776635-25776162 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 21-489
Cow position: chr8:10748407-10748872 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 67

Conread position: 21-774
Cow position: chr8:45161332-45160597 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 7

Conread position: 28-587
Cow position: chr8:45693586-45693030 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 7

Conread position: 33-503
Cow position: chr8:23216785-23217271 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 24

Conread position: 43-314
Cow position: chr8:29581995-29582268 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 44

Conread position: 44-489
Cow position: chr8:8557093-8556651 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 48-802
Cow position: chr8:42161662-42160937 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 43

Conread position: 49-463
Cow position: chr8:61067180-61066775 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 51-197
Cow position: chr8:42759025-42759170 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 59-502
Cow position: chr8:1349175-1348725 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 28

Conread position: 59-806
Cow position: chr8:38607448-38606716 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 19

Conread position: 70-779
Cow position: chr8:33430016-33430710 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 16

Conread position: 84-503
Cow position: chr8:27925420-27925826 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 115-585
Cow position: chr8:47491697-47491237 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 55

Conread position: 132-498
Cow position: chr8:21158676-21158312 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 162

Conread position: 132-541
Cow position: chr8:6065627-6065215 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 208

Conread position: 173-593
Cow position: chr8:25542684-25543103 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 175

Conread position: 195-593
Cow position: chr8:12543832-12543453 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 10

Conread position: 312-806
Cow position: chr8:16083649-16084161 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 36

Conread position: 332-503
Cow position: chr8:46600635-46600805 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 343-593
Cow position: chr8:47672822-47673072 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 349-806
Cow position: chr8:58187142-58186717 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 89

Conread position: 357-806
Cow position: chr8:44076522-44076085 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 137

Conread position: 545-689
Cow position: chr8:1117448-1117593 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 126, 0

Conread position: 1-193
Cow position: chr9:32968407-32968596 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 1-205
Cow position: chr9:51183043-51182835 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 19

Conread position: 1-243
Cow position: chr9:13219986-13220229 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 27

Conread position: 1-251
Cow position: chr9:22650820-22651057 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 24

Conread position: 1-310
Cow position: chr9:7002219-7002524 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-365
Cow position: chr9:2199775-2200132 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-414
Cow position: chr9:29028564-29028151 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 32

Conread position: 1-450
Cow position: chr9:2052115-2052558 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 29

Conread position: 1-476
Cow position: chr9:792845-792377 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 12

Conread position: 1-482
Cow position: chr9:37971542-37971068 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-482
Cow position: chr9:42309348-42309825 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr9:3567188-3566709 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 32

Conread position: 1-483
Cow position: chr9:4532156-4532634 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 87

Conread position: 1-483
Cow position: chr9:9012775-9013250 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 32

Conread position: 1-483
Cow position: chr9:29629082-29628604 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr9:31807205-31807676 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-483
Cow position: chr9:47001871-47002332 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr9:59174492-59174017 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chr9:60278357-60277879 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-485
Cow position: chr9:42568538-42569016 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 24

Conread position: 1-490
Cow position: chr9:3548505-3548023 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 24

Conread position: 1-503
Cow position: chr9:2170722-2171220 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 22

Conread position: 1-503
Cow position: chr9:28626365-28625878 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 29

Conread position: 1-503
Cow position: chr9:37129869-37129382 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 18

Conread position: 1-503
Cow position: chr9:59443520-59444013 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 25

Conread position: 1-522
Cow position: chr9:59535763-59536279 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 32

Conread position: 1-563
Cow position: chr9:15072181-15072748 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 496, 29

Conread position: 2-293
Cow position: chr9:8969257-8968968 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 21

Conread position: 2-510
Cow position: chr9:2500629-2500124 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 31

Conread position: 2-510
Cow position: chr9:12845872-12845381 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 28

Conread position: 5-398
Cow position: chr9:46626130-46625741 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-431
Cow position: chr9:4672276-4672698 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-438
Cow position: chr9:222877-222449 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 16

Conread position: 5-446
Cow position: chr9:1252298-1251869 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chr9:781133-780655 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 26

Conread position: 5-502
Cow position: chr9:163821-163341 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chr9:1996251-1995752 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 88

Conread position: 5-503
Cow position: chr9:25483542-25484038 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-503
Cow position: chr9:30672039-30672531 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 5-504
Cow position: chr9:28677643-28678141 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 5-504
Cow position: chr9:36724170-36724668 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 28

Conread position: 5-525
Cow position: chr9:3155701-3156208 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 5-587
Cow position: chr9:6111305-6110749 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 23

Conread position: 6-496
Cow position: chr9:16268030-16268528 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 25

Conread position: 6-503
Cow position: chr9:2185633-2186129 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 27

Conread position: 6-504
Cow position: chr9:17064728-17064215 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 27

Conread position: 6-525
Cow position: chr9:3542480-3542994 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 27

Conread position: 6-587
Cow position: chr9:64118499-64119066 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 96

Conread position: 7-593
Cow position: chr9:3356302-3355744 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 20

Conread position: 8-210
Cow position: chr9:1294143-1293944 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 8-289
Cow position: chr9:20310059-20309788 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 13-223
Cow position: chr9:2697254-2697047 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 14-503
Cow position: chr9:10315045-10315530 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 16

Conread position: 14-503
Cow position: chr9:37064119-37063640 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 69

Conread position: 15-483
Cow position: chr9:16175446-16175910 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 17-563
Cow position: chr9:31020489-31021051 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 71

Conread position: 18-503
Cow position: chr9:45873031-45873514 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 15

Conread position: 18-571
Cow position: chr9:35657645-35658174 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 21-483
Cow position: chr9:6051362-6050905 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 31

Conread position: 21-489
Cow position: chr9:25755521-25755074 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 35-541
Cow position: chr9:30826378-30826887 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 53

Conread position: 45-501
Cow position: chr9:3006537-3006084 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 47-563
Cow position: chr9:3586064-3586598 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 36

Conread position: 57-554
Cow position: chr9:26002411-26001937 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 320
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 116, 31

Conread position: 64-501
Cow position: chr9:34992110-34992554 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 22

Conread position: 79-541
Cow position: chr9:50789419-50789882 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 8

Conread position: 81-579
Cow position: chr9:3578727-3578268 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 330
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 492, 26

Conread position: 92-806
Cow position: chr9:13477457-13476758 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 142

Conread position: 136-600
Cow position: chr9:2001605-2001176 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 152-528
Cow position: chr9:18836823-18837198 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 144

Conread position: 194-502
Cow position: chr9:1979832-1980141 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 158

Conread position: 229-562
Cow position: chr9:1635444-1635763 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 262-585
Cow position: chr9:39040497-39040815 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 22, 34

Conread position: 276-571
Cow position: chr9:37095132-37095421 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 74, 0

Conread position: 294-805
Cow position: chr9:44817814-44818318 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 54

Conread position: 302-593
Cow position: chr9:20309568-20309282 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 320-503
Cow position: chr9:8968968-8968794 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 327-571
Cow position: chr9:3937833-3937591 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 201, 21

Conread position: 365-578
Cow position: chr9:3803067-3803280 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 413-593
Cow position: chr9:13222406-13222581 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 121, 82

Conread position: 454-676
Cow position: chr9:44794577-44794796 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 191, 39

Conread position: 464-614
Cow position: chr9:34720761-34720906 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 90

Conread position: 591-806
Cow position: chr9:28688013-28688227 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 82, 17

Conread position: 621-806
Cow position: chr9:3803278-3803475 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 624-806
Cow position: chr9:34721422-34721604 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 67

Conread position: 661-797
Cow position: chr9:44795057-44795196 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 1-207
Cow position: chrX:5834594-5834396 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 1-293
Cow position: chrX:6276020-6275733 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-347
Cow position: chrX:22131123-22130792 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 279, 27

Conread position: 1-407
Cow position: chrX:11668865-11668469 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 30

Conread position: 1-465
Cow position: chrX:29853993-29853535 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-475
Cow position: chrX:13413545-13413075 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chrX:2483069-2482589 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 1-483
Cow position: chrX:21222498-21222977 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chrX:22487759-22488230 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chrX:23392031-23391550 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 32

Conread position: 1-483
Cow position: chrX:26527546-26528025 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-483
Cow position: chrX:26759020-26758556 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-486
Cow position: chrX:27990210-27989729 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 33

Conread position: 1-496
Cow position: chrX:26504761-26505247 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 27

Conread position: 1-497
Cow position: chrX:40057491-40057001 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 24

Conread position: 1-501
Cow position: chrX:22777886-22778380 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 491, 23

Conread position: 1-502
Cow position: chrX:16363552-16363056 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chrX:320041-320536 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chrX:970336-970836 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-503
Cow position: chrX:6909764-6909277 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 27

Conread position: 1-503
Cow position: chrX:13007063-13006556 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 29

Conread position: 1-503
Cow position: chrX:21289917-21289422 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position: chrX:21602459-21602948 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 1-503
Cow position: chrX:21633013-21632518 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-503
Cow position: chrX:24122347-24121851 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 29

Conread position: 1-503
Cow position: chrX:27494275-27494779 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 87

Conread position: 1-503
Cow position: chrX:35017387-35017878 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 27

Conread position: 1-504
Cow position: chrX:28634842-28634342 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 20

Conread position: 1-522
Cow position: chrX:1546505-1547025 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 492, 32

Conread position: 1-522
Cow position: chrX:15598500-15599020 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 490, 32

Conread position: 1-523
Cow position: chrX:29872986-29872475 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 24

Conread position: 1-526
Cow position: chrX:16698872-16699392 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 32

Conread position: 1-526
Cow position: chrX:18954944-18954433 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-526
Cow position: chrX:30184323-30183802 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 32

Conread position: 1-526
Cow position: chrX:30710924-30711441 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 32

Conread position: 1-585
Cow position: chrX:20698706-20698148 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 92

Conread position: 1-595
Cow position: chrX:17668713-17668142 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 530, 24

Conread position: 1-673
Cow position: chrX:30142819-30142167 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 29

Conread position: 2-232
Cow position: chrX:30056243-30056466 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 2-316
Cow position: chrX:4795489-4795810 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 190, 28

Conread position: 2-503
Cow position: chrX:20803709-20804196 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 431, 28

Conread position: 2-693
Cow position: chrX:16017552-16016865 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 26

Conread position: 5-254
Cow position: chrX:24325571-24325323 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 225, 28

Conread position: 5-365
Cow position: chrX:30666364-30666008 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-377
Cow position: chrX:8479279-8479644 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-413
Cow position: chrX:12289367-12288957 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 28

Conread position: 5-459
Cow position: chrX:2860224-2859776 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 5-459
Cow position: chrX:5395388-5394937 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 28

Conread position: 5-481
Cow position: chrX:26400893-26400421 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 28

Conread position: 5-483
Cow position: chrX:23455996-23455529 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 5-484
Cow position: chrX:15127668-15127192 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 5-485
Cow position: chrX:7481181-7481654 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 5-485
Cow position: chrX:26767618-26767147 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 20

Conread position: 5-486
Cow position: chrX:12804285-12803812 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-486
Cow position: chrX:20316481-20316003 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chrX:2563283-2562802 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-489
Cow position: chrX:12280681-12280215 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 28

Conread position: 5-489
Cow position: chrX:12655179-12654705 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 28

Conread position: 5-489
Cow position: chrX:13398539-13398065 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 28

Conread position: 5-489
Cow position: chrX:27426742-27426265 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 28

Conread position: 5-489
Cow position: chrX:28562636-28562159 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-497
Cow position: chrX:3085327-3084836 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 28

Conread position: 5-502
Cow position: chrX:8454330-8454820 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chrX:9193070-9192576 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-502
Cow position: chrX:17478948-17478454 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 37

Conread position: 5-502
Cow position: chrX:23046720-23047212 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 28

Conread position: 5-502
Cow position: chrX:39521481-39521975 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 5-504
Cow position: chrX:2603623-2604122 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-523
Cow position: chrX:8586668-8587187 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 25

Conread position: 5-540
Cow position: chrX:24088977-24089511 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chrX:7093176-7093709 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 16

Conread position: 5-541
Cow position: chrX:7751473-7752011 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 28

Conread position: 5-541
Cow position: chrX:10531984-10531447 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 28

Conread position: 5-541
Cow position: chrX:11465424-11464891 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 16

Conread position: 5-541
Cow position: chrX:14787298-14786761 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chrX:16275254-16275788 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 16

Conread position: 5-541
Cow position: chrX:18218971-18219508 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 28

Conread position: 5-541
Cow position: chrX:31187659-31187135 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 26

Conread position: 5-541
Cow position: chrX:35529435-35529973 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 425, 26

Conread position: 5-563
Cow position: chrX:24136820-24136269 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 26

Conread position: 5-593
Cow position: chrX:18532580-18533148 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 23

Conread position: 5-806
Cow position: chrX:6283506-6282707 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 20

Conread position: 6-497
Cow position: chrX:6873494-6873010 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 7-489
Cow position: chrX:9007918-9008393 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 8-490
Cow position: chrX:22813964-22814438 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 13-489
Cow position: chrX:37848597-37849069 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 14-502
Cow position: chrX:18660198-18659715 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 14-526
Cow position: chrX:23041532-23041031 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 19

Conread position: 18-432
Cow position: chrX:21489818-21490227 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 18-502
Cow position: chrX:5284147-5283667 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 18-502
Cow position: chrX:8670180-8670659 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-503
Cow position: chrX:29285022-29285485 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 18-523
Cow position: chrX:24484823-24484324 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 18-540
Cow position: chrX:5839925-5840438 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 18-541
Cow position: chrX:2101446-2101970 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 15

Conread position: 18-564
Cow position: chrX:22526017-22525471 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 15

Conread position: 21-254
Cow position: chrX:39717385-39717619 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 66

Conread position: 21-501
Cow position: chrX:9124949-9125426 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 12

Conread position: 23-190
Cow position: chrX:25332680-25332846 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 0

Conread position: 25-585
Cow position: chrX:2142887-2143432 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 68

Conread position: 26-612
Cow position: chrX:30369408-30368838 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 61

Conread position: 28-502
Cow position: chrX:21304943-21304458 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 59

Conread position: 29-806
Cow position: chrX:2537174-2536418 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 642, 57

Conread position: 31-564
Cow position: chrX:29950975-29950451 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 56

Conread position: 43-502
Cow position: chrX:41411409-41410953 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 45-504
Cow position: chrX:37811774-37812236 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 446, 295

Conread position: 70-541
Cow position: chrX:29947342-29947818 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 272

Conread position: 72-497
Cow position: chrX:22583059-22582636 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 10

Conread position: 84-503
Cow position: chrX:28603804-28603390 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 87-503
Cow position: chrX:12670206-12669795 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 132-593
Cow position: chrX:12973532-12973072 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 308

Conread position: 136-624
Cow position: chrX:44386176-44386660 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 17

Conread position: 141-370
Cow position: chrX:21586875-21587101 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 141-503
Cow position: chrX:26628324-26627963 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 142-586
Cow position: chrX:31192093-31191661 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 99

Conread position: 161-496
Cow position: chrX:16461405-16461733 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 187

Conread position: 220-574
Cow position: chrX:29930961-29930626 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 27

Conread position: 225-593
Cow position: chrX:28549653-28550024 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 95

Conread position: 228-693
Cow position: chrX:31724821-31725287 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 120

Conread position: 258-503
Cow position: chrX:30044320-30044076 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 284-618
Cow position: chrX:35021115-35021448 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 41

Conread position: 298-587
Cow position: chrX:13052497-13052779 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 235, 50

Conread position: 312-503
Cow position: chrX:37142711-37142521 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 29, 0

Conread position: 319-503
Cow position: chrX:6275732-6275548 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 29

Conread position: 353-523
Cow position: chrX:41851480-41851310 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 356-503
Cow position: chrX:4795811-4795960 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 359-503
Cow position: chrX:30990016-30990162 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 361-564
Cow position: chrX:29884907-29885117 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 171

Conread position: 363-808
Cow position: chrX:21587120-21587571 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 287

Conread position: 394-553
Cow position: chrX:31081462-31081619 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 107, 7

Conread position: 558-704
Cow position: chrX:27959860-27960007 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 0