Cow genome map

Conread name: Ss1.1-Emb1-C0005182_F21.5

Conread position: 1-309
Cow position: chr1:78289857-78290163 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 41

Conread position: 1-324
Cow position: chr1:69536878-69537211 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 184

Conread position: 2-341
Cow position: chr1:18244403-18244051 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-347
Cow position: chr1:88635348-88635709 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 197

Conread position: 2-361
Cow position: chr1:37419775-37419424 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 161

Conread position: 3-317
Cow position: chr1:52233134-52232807 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 3-324
Cow position: chr1:13645705-13646026 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 200

Conread position: 3-324
Cow position: chr1:97123813-97124122 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 41

Conread position: 3-345
Cow position: chr1:40308044-40308395 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 252

Conread position: 3-349
Cow position: chr1:45097680-45098034 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 278

Conread position: 3-390
Cow position: chr1:77112466-77112069 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 263
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 124

Conread position: 4-406
Cow position: chr1:89479300-89479707 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 168

Conread position: 5-317
Cow position: chr1:57656545-57656852 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 11-323
Cow position: chr1:18880388-18880077 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-323
Cow position: chr1:61309007-61309317 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-325
Cow position: chr1:13450213-13450526 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-325
Cow position: chr1:40574220-40574533 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 21

Conread position: 14-301
Cow position: chr1:89740256-89739978 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 31

Conread position: 36-237
Cow position: chr1:38387656-38387457 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 38, 179

Conread position: 36-324
Cow position: chr1:72657016-72657301 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 6

Conread position: 37-392
Cow position: chr1:98661284-98660933 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 70

Conread position: 52-190
Cow position: chr1:79920685-79920546 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 52-225
Cow position: chr1:98784092-98784265 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 111

Conread position: 52-246
Cow position: chr1:77117549-77117350 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 52-249
Cow position: chr1:33895721-33895920 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 0

Conread position: 52-286
Cow position: chr1:8825092-8825327 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-286
Cow position: chr1:58335878-58336111 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 35

Conread position: 52-291
Cow position: chr1:55776195-55776418 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 46

Conread position: 52-301
Cow position: chr1:55276444-55276193 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr1:79335763-79335510 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 52-308
Cow position: chr1:56489882-56490139 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-309
Cow position: chr1:56163368-56163626 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-309
Cow position: chr1:56193890-56193632 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr1:58884026-58883768 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr1:85791728-85791986 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-310
Cow position: chr1:68607502-68607243 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr1:11292061-11291797 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 37

Conread position: 52-317
Cow position: chr1:29362338-29362605 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr1:30283500-30283234 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 85

Conread position: 52-317
Cow position: chr1:31396732-31396999 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr1:59210097-59209830 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 52-317
Cow position: chr1:60339347-60339614 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr1:67835098-67834832 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr1:82913102-82912835 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-318
Cow position: chr1:39543813-39544078 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 40

Conread position: 52-322
Cow position: chr1:59644889-59645148 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 52-323
Cow position: chr1:8554370-8554644 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr1:17012696-17012423 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 42

Conread position: 52-323
Cow position: chr1:28710958-28711232 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 107

Conread position: 52-323
Cow position: chr1:40053397-40053671 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr1:40684649-40684377 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-323
Cow position: chr1:62925655-62925929 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr1:86548093-86547819 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr1:1461286-1461018 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 8

Conread position: 52-324
Cow position: chr1:28801377-28801086 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 29, 0

Conread position: 52-324
Cow position: chr1:38414842-38415112 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 52-324
Cow position: chr1:89770643-89770370 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr1:97226664-97226397 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 135

Conread position: 52-325
Cow position: chr1:17036516-17036237 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr1:20828931-20829209 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr1:33851320-33851597 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 222

Conread position: 52-325
Cow position: chr1:56723197-56723474 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 147

Conread position: 52-325
Cow position: chr1:91718595-91718323 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 42

Conread position: 52-326
Cow position: chr1:21087455-21087734 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-326
Cow position: chr1:80359137-80358860 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 112

Conread position: 52-326
Cow position: chr1:82652695-82652974 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-331
Cow position: chr1:100597332-100597050 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 148

Conread position: 52-336
Cow position: chr1:82924136-82923853 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 20

Conread position: 52-338
Cow position: chr1:59933584-59933864 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 22

Conread position: 52-343
Cow position: chr1:101857942-101857651 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 97

Conread position: 52-344
Cow position: chr1:91899040-91899337 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 52-346
Cow position: chr1:79636889-79636598 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 139

Conread position: 52-347
Cow position: chr1:25179989-25179694 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 259

Conread position: 52-347
Cow position: chr1:49974149-49973854 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 144

Conread position: 52-347
Cow position: chr1:72080814-72081115 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 292

Conread position: 52-348
Cow position: chr1:52918576-52918290 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 94

Conread position: 52-349
Cow position: chr1:82564545-82564849 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr1:89425629-89425919 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 123

Conread position: 52-350
Cow position: chr1:42290430-42290728 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 52-353
Cow position: chr1:31366035-31365735 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 230

Conread position: 52-359
Cow position: chr1:95239411-95239728 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-379
Cow position: chr1:34689383-34689711 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 62

Conread position: 52-391
Cow position: chr1:36919955-36920301 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 220
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 24

Conread position: 52-392
Cow position: chr1:46835566-46835903 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 230
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 113, 133

Conread position: 52-399
Cow position: chr1:11863202-11862876 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 115

Conread position: 52-402
Cow position: chr1:54365782-54365439 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 66

Conread position: 52-414
Cow position: chr1:25887122-25886760 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 52-420
Cow position: chr1:31330746-31330380 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 62

Conread position: 52-421
Cow position: chr1:30027505-30027139 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 52-421
Cow position: chr1:67901885-67901506 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 71

Conread position: 52-421
Cow position: chr1:72136681-72137048 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 258

Conread position: 52-478
Cow position: chr1:55323015-55322592 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 97

Conread position: 53-288
Cow position: chr1:48245854-48246092 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-309
Cow position: chr1:5501976-5502233 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-324
Cow position: chr1:28722915-28723190 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 53-353
Cow position: chr1:62853802-62853495 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 78

Conread position: 53-395
Cow position: chr1:79109326-79109652 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 7

Conread position: 54-286
Cow position: chr1:33550962-33551194 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 108

Conread position: 54-288
Cow position: chr1:57567994-57568230 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 143

Conread position: 54-288
Cow position: chr1:63605738-63605503 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr1:99911005-99911237 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 44

Conread position: 54-297
Cow position: chr1:72186829-72186590 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 198

Conread position: 54-301
Cow position: chr1:12062153-12061905 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-304
Cow position: chr1:3385963-3385726 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 20, 122

Conread position: 54-304
Cow position: chr1:85780734-85780486 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 47

Conread position: 54-309
Cow position: chr1:28873117-28873373 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr1:76622914-76622658 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr1:76752610-76752354 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr1:79456924-79456673 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 54-309
Cow position: chr1:85882047-85882301 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 89

Conread position: 54-309
Cow position: chr1:88130814-88131070 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 54-309
Cow position: chr1:94659730-94659981 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 97

Conread position: 54-309
Cow position: chr1:102434995-102434740 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 158

Conread position: 54-310
Cow position: chr1:42736496-42736752 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 194

Conread position: 54-310
Cow position: chr1:72981311-72981567 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 54-317
Cow position: chr1:71562530-71562265 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-325
Cow position: chr1:69766506-69766782 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 158

Conread position: 54-328
Cow position: chr1:52359232-52358960 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 64

Conread position: 54-343
Cow position: chr1:76545495-76545211 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 89

Conread position: 54-347
Cow position: chr1:21999912-21999620 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 64

Conread position: 54-347
Cow position: chr1:57367089-57366795 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chr1:62244604-62244310 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chr1:69403032-69403317 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 95

Conread position: 54-347
Cow position: chr1:91893075-91892786 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 134

Conread position: 54-347
Cow position: chr1:93854564-93854858 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 257

Conread position: 54-348
Cow position: chr1:56144293-56143999 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 64

Conread position: 55-309
Cow position: chr1:86699173-86698918 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 55-347
Cow position: chr1:73071012-73070719 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 256

Conread position: 60-324
Cow position: chr1:87207378-87207114 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 235

Conread position: 60-324
Cow position: chr1:87244860-87245125 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-324
Cow position: chr1:89899652-89899391 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 87

Conread position: 60-324
Cow position: chr1:99348988-99348723 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-324
Cow position: chr1:101149882-101150147 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 60-345
Cow position: chr1:18406144-18405856 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 12

Conread position: 60-346
Cow position: chr1:33712113-33712406 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 60-346
Cow position: chr1:82918612-82918327 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 108

Conread position: 62-319
Cow position: chr1:19992631-19992383 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 108

Conread position: 62-322
Cow position: chr1:63501505-63501764 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 192

Conread position: 65-325
Cow position: chr1:66686477-66686223 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 174, 83

Conread position: 66-394
Cow position: chr1:78360798-78361121 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 11, 62

Conread position: 68-321
Cow position: chr1:77655758-77656005 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 6, 24

Conread position: 68-322
Cow position: chr1:80556013-80555771 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 68-347
Cow position: chr1:99375018-99375289 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 116

Conread position: 68-392
Cow position: chr1:32342018-32341696 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 6, 186

Conread position: 71-321
Cow position: chr1:39481921-39481671 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 168, 156

Conread position: 72-209
Cow position: chr1:60280450-60280313 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 72-277
Cow position: chr1:84149483-84149686 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 97

Conread position: 72-311
Cow position: chr1:67286553-67286787 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 118

Conread position: 72-321
Cow position: chr1:99020898-99020651 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 33, 132

Conread position: 72-347
Cow position: chr1:82355783-82356053 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 264, 52

Conread position: 72-359
Cow position: chr1:98865090-98864805 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 251, 213

Conread position: 72-361
Cow position: chr1:61738451-61738172 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 101, 112

Conread position: 72-394
Cow position: chr1:5318809-5319126 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 101, 118

Conread position: 72-414
Cow position: chr1:102556117-102556443 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 74-286
Cow position: chr1:40953967-40954178 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 0

Conread position: 79-395
Cow position: chr1:38385218-38384916 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 269, 77

Conread position: 82-304
Cow position: chr1:17941710-17941493 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 8, 89

Conread position: 91-319
Cow position: chr1:38396310-38396539 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 124

Conread position: 91-361
Cow position: chr1:44138263-44137998 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 233, 26

Conread position: 93-277
Cow position: chr1:102549331-102549513 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 114-480
Cow position: chr1:24650861-24651226 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 59

Conread position: 125-347
Cow position: chr1:69922323-69922102 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 187, 0

Conread position: 129-309
Cow position: chr1:65386447-65386627 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 129-477
Cow position: chr1:40513259-40512914 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 140-382
Cow position: chr1:69060626-69060868 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 173, 44

Conread position: 143-325
Cow position: chr1:9382411-9382228 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 168, 70

Conread position: 144-480
Cow position: chr1:94253052-94253387 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 263

Conread position: 147-480
Cow position: chr1:21720026-21720350 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 148-324
Cow position: chr1:18027631-18027455 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 150-469
Cow position: chr1:42870102-42869792 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 172

Conread position: 155-345
Cow position: chr1:59674595-59674787 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 156, 0

Conread position: 162-317
Cow position: chr1:53198701-53198858 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 168-366
Cow position: chr1:72039190-72038992 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 172-331
Cow position: chr1:87516121-87515962 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 178-304
Cow position: chr1:30534857-30534730 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 196-318
Cow position: chr1:5355313-5355435 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 105
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 202-325
Cow position: chr1:57424646-57424519 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 234-480
Cow position: chr1:38387478-38387247 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 241-395
Cow position: chr1:45021964-45021812 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 134, 18

Conread position: 256-407
Cow position: chr1:58179897-58179747 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 272-414
Cow position: chr1:31418696-31418555 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 18

Conread position: 296-422
Cow position: chr1:88295330-88295459 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 306-418
Cow position: chr1:29414311-29414198 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 2-298
Cow position: chr10:13365850-13365558 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 34

Conread position: 2-324
Cow position: chr10:34685894-34686232 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 2-341
Cow position: chr10:29696237-29696586 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 174

Conread position: 2-347
Cow position: chr10:25498352-25498716 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 3-214
Cow position: chr10:276595-276817 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 157

Conread position: 3-286
Cow position: chr10:57989962-57989693 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 3-324
Cow position: chr10:62216608-62216945 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 3-325
Cow position: chr10:4192216-4191883 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 81

Conread position: 3-325
Cow position: chr10:25565244-25564915 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-349
Cow position: chr10:32578304-32578657 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 100

Conread position: 3-414
Cow position: chr10:14859977-14860393 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 59

Conread position: 3-436
Cow position: chr10:44294845-44295283 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 294
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 19

Conread position: 5-325
Cow position: chr10:41157470-41157790 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 31

Conread position: 11-325
Cow position: chr10:47906806-47907121 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 26-417
Cow position: chr10:31523831-31524229 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 39

Conread position: 33-362
Cow position: chr10:23431855-23432186 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 215
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 19

Conread position: 33-480
Cow position: chr10:38546184-38545741 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 356

Conread position: 38-324
Cow position: chr10:40152401-40152116 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 13

Conread position: 50-421
Cow position: chr10:8328211-8327839 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 183

Conread position: 52-187
Cow position: chr10:39445075-39444939 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 52-190
Cow position: chr10:54059289-54059152 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 12

Conread position: 52-235
Cow position: chr10:28931960-28931777 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 22, 177

Conread position: 52-243
Cow position: chr10:55093307-55093496 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 20

Conread position: 52-248
Cow position: chr10:29632796-29632601 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 158
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 31, 6

Conread position: 52-277
Cow position: chr10:39904992-39905232 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 12

Conread position: 52-283
Cow position: chr10:38538432-38538196 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-288
Cow position: chr10:7282620-7282385 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 52-304
Cow position: chr10:124375-124628 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-309
Cow position: chr10:1375596-1375856 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr10:21740686-21740420 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 64

Conread position: 52-317
Cow position: chr10:57559483-57559204 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr10:19758416-19758687 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 111

Conread position: 52-324
Cow position: chr10:11685606-11685331 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr10:14803901-14804179 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 13

Conread position: 52-325
Cow position: chr10:19496221-19495943 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 52-325
Cow position: chr10:21400606-21400328 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr10:39179849-39180126 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 54

Conread position: 52-325
Cow position: chr10:41567172-41567445 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 90

Conread position: 52-325
Cow position: chr10:41876984-41877261 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 129

Conread position: 52-331
Cow position: chr10:37769888-37770168 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 52-333
Cow position: chr10:280555-280270 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 74

Conread position: 52-344
Cow position: chr10:39817297-39816999 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 8

Conread position: 52-347
Cow position: chr10:19511671-19511966 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 164

Conread position: 52-347
Cow position: chr10:32650798-32651094 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-361
Cow position: chr10:6260731-6260425 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 17, 21

Conread position: 52-385
Cow position: chr10:41389478-41389144 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 45

Conread position: 52-386
Cow position: chr10:3543516-3543194 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 52-391
Cow position: chr10:184327-184676 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 276

Conread position: 52-412
Cow position: chr10:49310570-49310913 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 34

Conread position: 52-414
Cow position: chr10:38847423-38847771 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 136

Conread position: 52-416
Cow position: chr10:24298789-24298428 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 200

Conread position: 52-416
Cow position: chr10:33346666-33347029 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 0

Conread position: 52-421
Cow position: chr10:15862072-15861698 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 202

Conread position: 52-421
Cow position: chr10:46191427-46191788 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 31

Conread position: 53-309
Cow position: chr10:51952552-51952299 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 159

Conread position: 53-414
Cow position: chr10:34318225-34317871 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 138

Conread position: 54-243
Cow position: chr10:19143271-19143081 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 20, 82

Conread position: 54-304
Cow position: chr10:22101299-22101548 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 158

Conread position: 54-304
Cow position: chr10:62408788-62408539 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 64

Conread position: 54-309
Cow position: chr10:2123195-2122939 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr10:8290050-8290301 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 115

Conread position: 54-309
Cow position: chr10:16925603-16925858 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 184

Conread position: 54-309
Cow position: chr10:25359466-25359722 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 54-309
Cow position: chr10:38345295-38345039 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr10:39041235-39040979 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-347
Cow position: chr10:21486981-21487276 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 258

Conread position: 60-324
Cow position: chr10:39853941-39853672 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-324
Cow position: chr10:62778420-62778686 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 60-410
Cow position: chr10:20371900-20371553 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 90

Conread position: 60-414
Cow position: chr10:10415474-10415814 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 68

Conread position: 61-301
Cow position: chr10:46694301-46694062 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 27

Conread position: 62-422
Cow position: chr10:41351685-41351325 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 156

Conread position: 64-338
Cow position: chr10:50311983-50312253 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 67

Conread position: 66-324
Cow position: chr10:16475842-16476095 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 65

Conread position: 66-341
Cow position: chr10:38526983-38527257 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 26

Conread position: 69-288
Cow position: chr10:10581881-10582105 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 122, 26

Conread position: 69-390
Cow position: chr10:38404431-38404117 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 95, 154

Conread position: 72-266
Cow position: chr10:24313748-24313556 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 153, 13

Conread position: 72-361
Cow position: chr10:11820419-11820705 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 75, 146

Conread position: 72-361
Cow position: chr10:24978050-24977768 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 0

Conread position: 72-414
Cow position: chr10:63841388-63841733 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 52, 15

Conread position: 83-353
Cow position: chr10:14951975-14952236 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 85-422
Cow position: chr10:31537365-31537692 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 312, 133

Conread position: 86-323
Cow position: chr10:10478041-10477798 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 93-480
Cow position: chr10:42628730-42629112 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 0

Conread position: 109-323
Cow position: chr10:19802679-19802892 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 71, 53

Conread position: 111-321
Cow position: chr10:47157073-47157283 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 156, 183

Conread position: 111-388
Cow position: chr10:60192256-60192534 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 173

Conread position: 151-288
Cow position: chr10:29846486-29846349 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 158-414
Cow position: chr10:22842922-22843179 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 193, 13

Conread position: 168-306
Cow position: chr10:19497134-19496996 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 177-480
Cow position: chr10:54979280-54978979 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 123

Conread position: 188-323
Cow position: chr10:56064875-56065012 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 123, 0

Conread position: 206-311
Cow position: chr10:68599073-68598968 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 213-360
Cow position: chr10:42679600-42679748 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 219-345
Cow position: chr10:24061573-24061445 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 229-434
Cow position: chr10:28931570-28931363 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 109, 30

Conread position: 236-414
Cow position: chr10:60489844-60490022 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 44

Conread position: 258-480
Cow position: chr10:8339168-8339389 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 32

Conread position: 2-308
Cow position: chr11:7113234-7113554 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 97

Conread position: 2-317
Cow position: chr11:8262061-8261734 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 289

Conread position: 2-317
Cow position: chr11:54209257-54209582 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 141

Conread position: 2-323
Cow position: chr11:61401401-61401076 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 2-345
Cow position: chr11:34020540-34020888 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 3-277
Cow position: chr11:30304877-30305158 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 127

Conread position: 3-277
Cow position: chr11:44495958-44495666 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 3-299
Cow position: chr11:28230109-28229802 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-324
Cow position: chr11:8887513-8887182 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 183

Conread position: 3-325
Cow position: chr11:25527212-25527537 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 87

Conread position: 3-478
Cow position: chr11:8282716-8283198 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 155

Conread position: 4-347
Cow position: chr11:12351410-12351065 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 38

Conread position: 11-323
Cow position: chr11:9606918-9606601 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 185

Conread position: 11-323
Cow position: chr11:20921079-20920768 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-325
Cow position: chr11:67450164-67450479 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 41-400
Cow position: chr11:17280606-17280254 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 197

Conread position: 45-317
Cow position: chr11:38505904-38505635 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 12

Conread position: 51-480
Cow position: chr11:10090036-10090470 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 79

Conread position: 52-198
Cow position: chr11:15998598-15998743 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 60

Conread position: 52-201
Cow position: chr11:7688313-7688463 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 52-224
Cow position: chr11:32684986-32685159 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 168

Conread position: 52-235
Cow position: chr11:10049823-10050006 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 25, 181

Conread position: 52-252
Cow position: chr11:81852927-81852728 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 25, 17

Conread position: 52-276
Cow position: chr11:30125545-30125335 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 140

Conread position: 52-282
Cow position: chr11:9157722-9157499 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 78

Conread position: 52-284
Cow position: chr11:40776839-40776606 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-290
Cow position: chr11:77728824-77728578 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 52-309
Cow position: chr11:4271168-4270900 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr11:5343514-5343256 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr11:23877009-23877263 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 42

Conread position: 52-309
Cow position: chr11:37477416-37477158 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr11:1496370-1496104 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 58

Conread position: 52-317
Cow position: chr11:52419091-52419358 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr11:57628343-57628076 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-320
Cow position: chr11:31414222-31413961 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 29, 140

Conread position: 52-323
Cow position: chr11:36744477-36744203 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr11:64045701-64045975 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr11:73477011-73477285 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr11:8244410-8244680 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 140

Conread position: 52-324
Cow position: chr11:9659696-9659411 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-324
Cow position: chr11:21466780-21467053 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-324
Cow position: chr11:37065421-37065142 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 52-324
Cow position: chr11:37491946-37491670 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 125

Conread position: 52-324
Cow position: chr11:45111066-45111345 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 33

Conread position: 52-325
Cow position: chr11:19064546-19064268 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr11:67846868-67846590 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-330
Cow position: chr11:48084816-48085092 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 23, 117

Conread position: 52-344
Cow position: chr11:3492714-3493013 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-344
Cow position: chr11:4027851-4027565 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 23, 78

Conread position: 52-349
Cow position: chr11:32450571-32450874 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-358
Cow position: chr11:4041368-4041063 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-406
Cow position: chr11:42429038-42429394 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 54

Conread position: 52-412
Cow position: chr11:66726168-66726541 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 52-414
Cow position: chr11:17220518-17220161 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 320

Conread position: 52-414
Cow position: chr11:87127545-87127908 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 83

Conread position: 52-421
Cow position: chr11:3240352-3240709 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 95

Conread position: 53-266
Cow position: chr11:63659877-63659663 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 53-309
Cow position: chr11:17107982-17107725 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-309
Cow position: chr11:43514926-43514669 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 152

Conread position: 53-309
Cow position: chr11:85394107-85393850 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-317
Cow position: chr11:53287751-53287486 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 244

Conread position: 53-323
Cow position: chr11:52886793-52886528 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 96

Conread position: 53-325
Cow position: chr11:15983327-15983605 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 54-288
Cow position: chr11:19102781-19102546 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr11:37093356-37093122 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 220

Conread position: 54-288
Cow position: chr11:41170987-41170752 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr11:72110259-72110025 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 6

Conread position: 54-304
Cow position: chr11:28054894-28054644 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 76

Conread position: 54-304
Cow position: chr11:29668923-29668675 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 150

Conread position: 54-309
Cow position: chr11:24393027-24393278 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr11:44157530-44157292 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 54-347
Cow position: chr11:10847150-10847441 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 142

Conread position: 54-347
Cow position: chr11:11987812-11988106 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 185

Conread position: 54-347
Cow position: chr11:12358720-12358425 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 251

Conread position: 54-347
Cow position: chr11:26125226-26124932 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chr11:38835710-38835432 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 82

Conread position: 54-347
Cow position: chr11:71329349-71329643 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 60-263
Cow position: chr11:10210252-10210048 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 200

Conread position: 60-271
Cow position: chr11:44860818-44860606 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 60-320
Cow position: chr11:28063393-28063648 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 60-325
Cow position: chr11:8519704-8519966 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 141

Conread position: 61-288
Cow position: chr11:58134082-58134327 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 63-385
Cow position: chr11:75874074-75873743 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 208
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 83

Conread position: 65-288
Cow position: chr11:9734929-9734708 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 68-279
Cow position: chr11:43732125-43732335 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 7, 82

Conread position: 68-391
Cow position: chr11:29233938-29233622 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 13, 129

Conread position: 72-198
Cow position: chr11:13067298-13067172 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 72-198
Cow position: chr11:13162706-13162832 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 111-377
Cow position: chr11:4065471-4065199 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 119-323
Cow position: chr11:12093328-12093533 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 180, 0

Conread position: 125-344
Cow position: chr11:33194776-33194551 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 186, 0

Conread position: 126-301
Cow position: chr11:77235493-77235668 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 129-304
Cow position: chr11:53432285-53432110 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 132-320
Cow position: chr11:9220336-9220147 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 181, 0

Conread position: 143-480
Cow position: chr11:7316668-7317000 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 65

Conread position: 150-389
Cow position: chr11:31925970-31926219 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 35

Conread position: 172-346
Cow position: chr11:76374375-76374202 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 150, 6

Conread position: 191-324
Cow position: chr11:8267698-8267566 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 200-298
Cow position: chr11:15998787-15998886 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 201-320
Cow position: chr11:59369461-59369580 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 219-317
Cow position: chr11:256316-256217 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 225-421
Cow position: chr11:10050589-10050786 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 126, 15

Conread position: 281-474
Cow position: chr11:30125106-30124909 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 296-478
Cow position: chr11:7113836-7114008 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 2-324
Cow position: chr12:8311111-8311444 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-341
Cow position: chr12:21941709-21942050 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 21

Conread position: 3-347
Cow position: chr12:26947053-26946703 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 27, 267

Conread position: 35-324
Cow position: chr12:22332602-22332887 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 9

Conread position: 38-324
Cow position: chr12:21197936-21198223 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 13

Conread position: 51-325
Cow position: chr12:32653533-32653812 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 51-346
Cow position: chr12:21901930-21902225 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 52-230
Cow position: chr12:26141804-26141983 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 52-232
Cow position: chr12:48405261-48405443 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 35

Conread position: 52-235
Cow position: chr12:21207685-21207868 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 52-288
Cow position: chr12:42859837-42859600 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr12:14662643-14662390 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 52-309
Cow position: chr12:6406658-6406403 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 148

Conread position: 52-309
Cow position: chr12:8678132-8677873 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 52-309
Cow position: chr12:11098232-11098490 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 196

Conread position: 52-309
Cow position: chr12:20998132-20997885 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 22, 66

Conread position: 52-309
Cow position: chr12:21426684-21426942 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr12:43031393-43031128 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-324
Cow position: chr12:45261606-45261886 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr12:37558545-37558824 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 52-347
Cow position: chr12:2282536-2282830 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 274

Conread position: 52-382
Cow position: chr12:18501033-18501347 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 107

Conread position: 52-419
Cow position: chr12:21500106-21500457 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 250
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 22, 71

Conread position: 52-480
Cow position: chr12:15951274-15950855 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 100

Conread position: 53-317
Cow position: chr12:3360895-3361161 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-317
Cow position: chr12:21254665-21254399 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-356
Cow position: chr12:2838863-2838566 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 176

Conread position: 54-288
Cow position: chr12:25101069-25100834 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 54-309
Cow position: chr12:252064-251810 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 115

Conread position: 54-309
Cow position: chr12:1402483-1402738 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 171

Conread position: 54-309
Cow position: chr12:22205754-22205500 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 76

Conread position: 54-347
Cow position: chr12:27932953-27932659 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 279

Conread position: 54-347
Cow position: chr12:28766027-28765736 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 257

Conread position: 60-363
Cow position: chr12:2797-3098 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 242

Conread position: 61-323
Cow position: chr12:33986162-33986426 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 72-404
Cow position: chr12:34854786-34854463 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 221
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 277, 76

Conread position: 116-324
Cow position: chr12:5861209-5861416 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 82

Conread position: 141-317
Cow position: chr12:23240084-23240260 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 172, 79

Conread position: 203-317
Cow position: chr12:31544920-31545035 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 214-323
Cow position: chr12:4157530-4157641 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 256-390
Cow position: chr12:48405445-48405577 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 95, 49

Conread position: 2-324
Cow position: chr13:3276862-3277196 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-345
Cow position: chr13:34142953-34142594 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 3-317
Cow position: chr13:32986344-32986021 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 14

Conread position: 3-479
Cow position: chr13:54284286-54284768 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 38

Conread position: 4-324
Cow position: chr13:62327859-62327540 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 32

Conread position: 11-359
Cow position: chr13:21840462-21840111 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 21

Conread position: 38-187
Cow position: chr13:10114894-10114748 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 103

Conread position: 52-230
Cow position: chr13:33336573-33336394 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 52-235
Cow position: chr13:30244964-30244780 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 52-273
Cow position: chr13:23003746-23003527 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 85

Conread position: 52-275
Cow position: chr13:19438705-19438926 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 121, 20

Conread position: 52-288
Cow position: chr13:34042599-34042363 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 78

Conread position: 52-288
Cow position: chr13:47230218-47229981 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-298
Cow position: chr13:6668354-6668107 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr13:3567552-3567821 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr13:9044270-9044527 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 214

Conread position: 52-309
Cow position: chr13:50109231-50109489 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr13:2389049-2388782 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr13:17308244-17308511 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-318
Cow position: chr13:34911609-34911343 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 162

Conread position: 52-321
Cow position: chr13:31560957-31561226 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 22, 117

Conread position: 52-324
Cow position: chr13:33824962-33824693 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 142

Conread position: 52-325
Cow position: chr13:2297029-2296764 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 24, 135

Conread position: 52-325
Cow position: chr13:13324518-13324796 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr13:31734312-31734038 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 76

Conread position: 52-345
Cow position: chr13:34325906-34325612 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 114

Conread position: 52-346
Cow position: chr13:33927799-33927517 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 24, 70

Conread position: 52-348
Cow position: chr13:4872846-4873146 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 187

Conread position: 52-351
Cow position: chr13:46732451-46732161 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 49

Conread position: 52-394
Cow position: chr13:30063897-30064224 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 22, 59

Conread position: 52-477
Cow position: chr13:20542601-20542187 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 46

Conread position: 53-346
Cow position: chr13:49973453-49973754 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-381
Cow position: chr13:30140763-30141103 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 216

Conread position: 54-309
Cow position: chr13:15924613-15924357 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr13:32738049-32737795 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 58

Conread position: 54-309
Cow position: chr13:35757012-35757268 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-318
Cow position: chr13:3654538-3654289 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 20, 70

Conread position: 54-324
Cow position: chr13:56730511-56730245 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 54-325
Cow position: chr13:15520744-15520472 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chr13:4940858-4941153 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 258

Conread position: 54-347
Cow position: chr13:31612564-31612271 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 175

Conread position: 54-406
Cow position: chr13:34767512-34767175 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 83

Conread position: 55-309
Cow position: chr13:1593384-1593128 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 60-303
Cow position: chr13:2908673-2908428 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-303
Cow position: chr13:31832377-31832621 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 60-324
Cow position: chr13:30657197-30656935 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 141

Conread position: 60-324
Cow position: chr13:34692940-34693207 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-346
Cow position: chr13:34186908-34186624 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 174

Conread position: 60-347
Cow position: chr13:4178874-4178583 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 286

Conread position: 61-252
Cow position: chr13:11800004-11799811 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 54

Conread position: 61-309
Cow position: chr13:4483576-4483821 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 45

Conread position: 62-390
Cow position: chr13:60701512-60701201 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 214
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 68

Conread position: 63-385
Cow position: chr13:34936927-34937250 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 290

Conread position: 72-322
Cow position: chr13:22185944-22185699 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 78-323
Cow position: chr13:16343415-16343177 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 201, 90

Conread position: 94-323
Cow position: chr13:35030368-35030594 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 65, 96

Conread position: 105-262
Cow position: chr13:30237941-30238098 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 110-317
Cow position: chr13:60466165-60466373 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 112-317
Cow position: chr13:3058281-3058074 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 103, 0

Conread position: 141-309
Cow position: chr13:32544918-32545086 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 141-395
Cow position: chr13:2306353-2306604 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 208, 147

Conread position: 149-421
Cow position: chr13:34111162-34111422 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 194, 72

Conread position: 150-322
Cow position: chr13:34868608-34868783 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 91

Conread position: 158-317
Cow position: chr13:676752-676912 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 153, 0

Conread position: 193-324
Cow position: chr13:11799851-11799719 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 20

Conread position: 193-471
Cow position: chr13:15451645-15451376 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 110

Conread position: 194-304
Cow position: chr13:22765935-22766045 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 283-444
Cow position: chr13:26843794-26843948 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 2-320
Cow position: chr14:44130499-44130827 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 223

Conread position: 2-324
Cow position: chr14:22242463-22242799 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-324
Cow position: chr14:45767587-45767920 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-344
Cow position: chr14:44225988-44226335 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 25

Conread position: 2-480
Cow position: chr14:35387551-35387080 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 20

Conread position: 3-304
Cow position: chr14:44685630-44685941 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 3-309
Cow position: chr14:13778548-13778858 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-309
Cow position: chr14:30585363-30585049 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 302

Conread position: 3-324
Cow position: chr14:50110153-50110484 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 7-324
Cow position: chr14:5201473-5201163 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 62

Conread position: 7-414
Cow position: chr14:12608794-12609189 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 11-323
Cow position: chr14:23901192-23900881 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-344
Cow position: chr14:17491848-17491512 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 17-244
Cow position: chr14:41755447-41755682 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 28

Conread position: 22-480
Cow position: chr14:40339295-40339749 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 112

Conread position: 27-395
Cow position: chr14:38146205-38146566 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 20

Conread position: 38-286
Cow position: chr14:23260291-23260046 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 126

Conread position: 38-374
Cow position: chr14:43553053-43553391 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 48

Conread position: 38-379
Cow position: chr14:31887310-31887653 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 37, 13

Conread position: 41-278
Cow position: chr14:48824215-48824455 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 30, 0

Conread position: 45-361
Cow position: chr14:45205718-45206030 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 75

Conread position: 51-199
Cow position: chr14:45080165-45080313 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 112

Conread position: 51-309
Cow position: chr14:45029471-45029221 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 52

Conread position: 51-422
Cow position: chr14:47589513-47589880 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 241
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 155

Conread position: 52-288
Cow position: chr14:22032040-22031805 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 52-304
Cow position: chr14:17685041-17685295 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr14:44287605-44287352 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 144

Conread position: 52-309
Cow position: chr14:13864438-13864179 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr14:30596738-30596472 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 13

Conread position: 52-317
Cow position: chr14:45672399-45672133 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 154

Conread position: 52-318
Cow position: chr14:17001409-17001148 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 168

Conread position: 52-318
Cow position: chr14:38532648-38532380 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 52-318
Cow position: chr14:42151968-42152236 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 52-321
Cow position: chr14:48406043-48405774 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 33, 96

Conread position: 52-324
Cow position: chr14:13660343-13660068 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 97

Conread position: 52-324
Cow position: chr14:19619867-19620138 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-324
Cow position: chr14:23690583-23690311 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 65

Conread position: 52-324
Cow position: chr14:41085137-41084861 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 124

Conread position: 52-325
Cow position: chr14:23257004-23257282 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 52-325
Cow position: chr14:44855781-44855508 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 125

Conread position: 52-338
Cow position: chr14:46464716-46465004 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 198

Conread position: 52-344
Cow position: chr14:13272897-13273187 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 136

Conread position: 52-349
Cow position: chr14:750215-750519 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-354
Cow position: chr14:44377075-44377386 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 22, 9

Conread position: 52-359
Cow position: chr14:29048257-29047941 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 78

Conread position: 52-361
Cow position: chr14:33394131-33393815 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 52-390
Cow position: chr14:41490652-41490313 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 232
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 85

Conread position: 52-391
Cow position: chr14:43034247-43033906 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 170

Conread position: 52-394
Cow position: chr14:14309431-14309074 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 22, 82

Conread position: 52-406
Cow position: chr14:37414242-37413896 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 176

Conread position: 52-414
Cow position: chr14:22019040-22019398 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 63

Conread position: 52-421
Cow position: chr14:41407467-41407832 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 117

Conread position: 52-422
Cow position: chr14:27992666-27992291 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 250
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 22, 178

Conread position: 52-474
Cow position: chr14:46084269-46084690 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 60

Conread position: 52-480
Cow position: chr14:45303719-45303293 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 323

Conread position: 53-298
Cow position: chr14:13480088-13479842 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 53-309
Cow position: chr14:9045212-9045469 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 53-324
Cow position: chr14:37223548-37223819 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 193

Conread position: 53-324
Cow position: chr14:47624206-47624471 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 200

Conread position: 53-325
Cow position: chr14:50134716-50134994 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 53-349
Cow position: chr14:2283985-2284288 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 54-288
Cow position: chr14:5511470-5511704 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 83

Conread position: 54-288
Cow position: chr14:19328621-19328386 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr14:5528709-5528965 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr14:7472022-7472271 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 58

Conread position: 54-309
Cow position: chr14:20782104-20782359 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 53

Conread position: 54-323
Cow position: chr14:16920043-16919773 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-324
Cow position: chr14:45917063-45917336 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-328
Cow position: chr14:16273648-16273375 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 199

Conread position: 54-331
Cow position: chr14:28994207-28993929 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-338
Cow position: chr14:13302678-13302960 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 53

Conread position: 54-347
Cow position: chr14:11154519-11154225 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 175

Conread position: 54-347
Cow position: chr14:15276932-15276639 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 34

Conread position: 55-347
Cow position: chr14:48254667-48254364 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 266

Conread position: 58-324
Cow position: chr14:45712335-45712073 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 185

Conread position: 60-321
Cow position: chr14:45850877-45851137 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 52

Conread position: 60-324
Cow position: chr14:7830886-7830622 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 28

Conread position: 60-324
Cow position: chr14:36967908-36968173 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-327
Cow position: chr14:44422207-44422475 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-331
Cow position: chr14:44551538-44551809 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 12

Conread position: 60-422
Cow position: chr14:34775181-34775551 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 169

Conread position: 62-246
Cow position: chr14:21743258-21743443 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 152

Conread position: 63-346
Cow position: chr14:38040539-38040816 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 49

Conread position: 64-373
Cow position: chr14:47640798-47641098 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 165

Conread position: 66-391
Cow position: chr14:47654394-47654723 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 9, 228

Conread position: 72-361
Cow position: chr14:38816539-38816256 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 188
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 72-393
Cow position: chr14:35928846-35929162 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 102

Conread position: 75-324
Cow position: chr14:45771105-45770861 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 78-389
Cow position: chr14:13326466-13326163 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 283, 39

Conread position: 81-314
Cow position: chr14:42123526-42123291 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 84-346
Cow position: chr14:45160775-45161037 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 65

Conread position: 90-421
Cow position: chr14:44580641-44580963 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 16

Conread position: 103-331
Cow position: chr14:45833847-45834081 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 111-414
Cow position: chr14:33675517-33675821 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 5

Conread position: 126-286
Cow position: chr14:13621428-13621267 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 66

Conread position: 140-324
Cow position: chr14:45565063-45565246 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 8, 0

Conread position: 141-309
Cow position: chr14:12743333-12743165 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 154-353
Cow position: chr14:40169955-40169760 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 42

Conread position: 178-394
Cow position: chr14:44777213-44777006 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 188, 27

Conread position: 181-395
Cow position: chr14:5073724-5073939 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 165, 192

Conread position: 189-309
Cow position: chr14:45080829-45080948 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 193-317
Cow position: chr14:43557223-43557348 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 118, 0

Conread position: 195-422
Cow position: chr14:45235798-45236020 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 140, 8

Conread position: 2-309
Cow position: chr15:4795265-4795581 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 157

Conread position: 2-325
Cow position: chr15:4170113-4169778 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 101

Conread position: 3-309
Cow position: chr15:3037927-3037607 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 3-309
Cow position: chr15:4678076-4678381 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 3-320
Cow position: chr15:1662962-1663285 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 215
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 19

Conread position: 3-323
Cow position: chr15:7233895-7234223 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 42

Conread position: 3-324
Cow position: chr15:4961225-4961547 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 215

Conread position: 3-324
Cow position: chr15:7522905-7522574 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 100

Conread position: 3-346
Cow position: chr15:32693132-32693483 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 182

Conread position: 3-347
Cow position: chr15:7894627-7894289 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 55

Conread position: 3-347
Cow position: chr15:31358486-31358828 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 81

Conread position: 3-347
Cow position: chr15:36648495-36648852 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 3-361
Cow position: chr15:20357688-20357332 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 29, 68

Conread position: 3-480
Cow position: chr15:32679966-32679506 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 137

Conread position: 3-480
Cow position: chr15:36642208-36642681 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 343

Conread position: 4-344
Cow position: chr15:50124336-50123996 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 32

Conread position: 4-480
Cow position: chr15:35648635-35648168 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 14

Conread position: 7-347
Cow position: chr15:4733448-4733802 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 175

Conread position: 9-317
Cow position: chr15:3010243-3009937 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 27

Conread position: 11-177
Cow position: chr15:22204503-22204340 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 67, 25

Conread position: 11-317
Cow position: chr15:4811933-4812232 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 25

Conread position: 21-324
Cow position: chr15:35747899-35748213 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 26-324
Cow position: chr15:10787508-10787209 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 39

Conread position: 36-480
Cow position: chr15:370051-369614 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 202

Conread position: 38-349
Cow position: chr15:6078374-6078684 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 38-408
Cow position: chr15:36627039-36626666 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 48-414
Cow position: chr15:686171-686530 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 10

Conread position: 51-324
Cow position: chr15:2076293-2076567 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 51-345
Cow position: chr15:7933995-7934275 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 17, 85

Conread position: 52-176
Cow position: chr15:10479048-10478925 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 7

Conread position: 52-187
Cow position: chr15:21816099-21815962 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 52-206
Cow position: chr15:21877710-21877555 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 52-250
Cow position: chr15:44828457-44828660 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 62

Conread position: 52-258
Cow position: chr15:22920772-22920979 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-275
Cow position: chr15:525204-524979 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 0

Conread position: 52-276
Cow position: chr15:7928267-7928486 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 166, 0

Conread position: 52-277
Cow position: chr15:3261760-3261543 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 22, 83

Conread position: 52-278
Cow position: chr15:38979566-38979792 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 200

Conread position: 52-285
Cow position: chr15:51800377-51800605 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 92

Conread position: 52-288
Cow position: chr15:6156307-6156070 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr15:18333180-18332929 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 83

Conread position: 52-309
Cow position: chr15:1772146-1772403 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 52-309
Cow position: chr15:4921790-4922055 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 52-309
Cow position: chr15:7260274-7260530 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 111

Conread position: 52-309
Cow position: chr15:8099134-8099392 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 52-309
Cow position: chr15:14582971-14582715 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 238

Conread position: 52-309
Cow position: chr15:17080554-17080297 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 129

Conread position: 52-309
Cow position: chr15:20749062-20749320 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr15:32494739-32494482 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 176

Conread position: 52-317
Cow position: chr15:444256-444522 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 190

Conread position: 52-317
Cow position: chr15:690437-690703 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-317
Cow position: chr15:1519502-1519236 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 68

Conread position: 52-317
Cow position: chr15:1763739-1764003 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 97

Conread position: 52-317
Cow position: chr15:2648009-2647742 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr15:3888527-3888793 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 125

Conread position: 52-317
Cow position: chr15:4196110-4196377 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-317
Cow position: chr15:6593296-6593031 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 78

Conread position: 52-317
Cow position: chr15:37392148-37392405 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 68

Conread position: 52-317
Cow position: chr15:42320774-42320507 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr15:50146725-50146992 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-318
Cow position: chr15:6472263-6472003 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 83

Conread position: 52-318
Cow position: chr15:53338680-53338937 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 52-323
Cow position: chr15:25789321-25789051 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 63

Conread position: 52-323
Cow position: chr15:29009490-29009758 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 96

Conread position: 52-323
Cow position: chr15:36970571-36970845 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr15:4681877-4682152 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 16

Conread position: 52-324
Cow position: chr15:4764852-4765124 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 152

Conread position: 52-324
Cow position: chr15:7544527-7544801 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 163

Conread position: 52-324
Cow position: chr15:10888256-10888524 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 147

Conread position: 52-324
Cow position: chr15:21961154-21961427 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 52-325
Cow position: chr15:1781901-1782179 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr15:1834812-1834536 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 13

Conread position: 52-325
Cow position: chr15:2011730-2012006 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 93

Conread position: 52-325
Cow position: chr15:6370131-6369856 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 49

Conread position: 52-325
Cow position: chr15:18268340-18268062 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr15:28490494-28490216 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-331
Cow position: chr15:17292087-17292366 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 9

Conread position: 52-334
Cow position: chr15:35735102-35735388 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 263

Conread position: 52-345
Cow position: chr15:12421519-12421226 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-347
Cow position: chr15:8750074-8750368 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 49

Conread position: 52-347
Cow position: chr15:15347473-15347177 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-347
Cow position: chr15:51216236-51216530 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 52-361
Cow position: chr15:32672533-32672838 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 165

Conread position: 52-363
Cow position: chr15:24793695-24794010 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 83

Conread position: 52-381
Cow position: chr15:32733137-32732815 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 290, 82

Conread position: 52-381
Cow position: chr15:51671995-51672328 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-391
Cow position: chr15:17219224-17218888 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 232
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 111, 18

Conread position: 52-395
Cow position: chr15:2007185-2007526 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 97

Conread position: 52-406
Cow position: chr15:24715874-24716220 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 16

Conread position: 52-411
Cow position: chr15:324592-324943 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 46

Conread position: 52-414
Cow position: chr15:1236967-1237328 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 69

Conread position: 52-414
Cow position: chr15:12614715-12615072 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 117

Conread position: 52-414
Cow position: chr15:21448948-21449319 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 66

Conread position: 52-414
Cow position: chr15:40105111-40105472 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 179

Conread position: 52-422
Cow position: chr15:8408200-8408572 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 173

Conread position: 53-250
Cow position: chr15:25186296-25186103 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 131

Conread position: 53-288
Cow position: chr15:6554207-6553972 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 189

Conread position: 53-311
Cow position: chr15:2924538-2924792 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 53-323
Cow position: chr15:4630268-4630001 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 177
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 143

Conread position: 53-324
Cow position: chr15:6277610-6277340 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 92

Conread position: 53-338
Cow position: chr15:16542317-16542600 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 201

Conread position: 54-288
Cow position: chr15:42936362-42936597 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 54-288
Cow position: chr15:44069571-44069806 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 54-304
Cow position: chr15:17039603-17039358 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 64

Conread position: 54-304
Cow position: chr15:18576369-18576613 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 43

Conread position: 54-304
Cow position: chr15:19738404-19738154 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 57

Conread position: 54-309
Cow position: chr15:4384916-4385172 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr15:7836892-7837148 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 54-309
Cow position: chr15:24294740-24294996 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-310
Cow position: chr15:35753949-35753693 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 174

Conread position: 55-393
Cow position: chr15:11624560-11624893 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 131

Conread position: 60-288
Cow position: chr15:21666092-21665863 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-323
Cow position: chr15:4671080-4671347 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 16, 171

Conread position: 60-324
Cow position: chr15:7921986-7921723 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 109

Conread position: 60-331
Cow position: chr15:17271742-17271468 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 76

Conread position: 60-345
Cow position: chr15:41365835-41366116 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 122

Conread position: 60-347
Cow position: chr15:23157173-23156899 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 14, 33

Conread position: 60-400
Cow position: chr15:6621995-6622331 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 109

Conread position: 61-235
Cow position: chr15:32722530-32722356 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 16, 76

Conread position: 64-288
Cow position: chr15:42490863-42491087 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 30

Conread position: 64-323
Cow position: chr15:4143158-4142899 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 148

Conread position: 65-324
Cow position: chr15:4649486-4649746 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 131

Conread position: 66-382
Cow position: chr15:22151866-22152184 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 208
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 29

Conread position: 66-407
Cow position: chr15:17787507-17787164 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 201

Conread position: 68-248
Cow position: chr15:7788707-7788527 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 8, 116

Conread position: 72-392
Cow position: chr15:11299144-11298828 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 217
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 120, 187

Conread position: 73-421
Cow position: chr15:15265986-15265643 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 91

Conread position: 99-317
Cow position: chr15:2589771-2589557 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 212, 90

Conread position: 99-317
Cow position: chr15:2592132-2591918 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 212, 90

Conread position: 109-324
Cow position: chr15:8000527-8000314 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 124, 0

Conread position: 126-317
Cow position: chr15:56209-56401 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 185, 0

Conread position: 140-347
Cow position: chr15:6650254-6650056 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 173, 59

Conread position: 141-399
Cow position: chr15:5104171-5103917 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 207, 77

Conread position: 145-390
Cow position: chr15:12453157-12453396 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 150-421
Cow position: chr15:9429274-9429554 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 113, 259

Conread position: 158-347
Cow position: chr15:316112-315918 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 52, 14

Conread position: 163-317
Cow position: chr15:32710452-32710607 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 148, 0

Conread position: 163-324
Cow position: chr15:21623457-21623615 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 172-323
Cow position: chr15:1882737-1882585 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 139, 66

Conread position: 174-346
Cow position: chr15:5068620-5068792 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 191-345
Cow position: chr15:5544579-5544736 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 122, 141

Conread position: 272-378
Cow position: chr15:51801566-51801673 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 2-323
Cow position: chr16:53045602-53045927 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 3-288
Cow position: chr16:28471859-28471565 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 27, 0

Conread position: 3-306
Cow position: chr16:5918721-5919037 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-317
Cow position: chr16:36362122-36361796 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 24

Conread position: 3-325
Cow position: chr16:5661096-5661427 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-347
Cow position: chr16:10204181-10203835 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 309

Conread position: 7-399
Cow position: chr16:31376021-31375634 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 113

Conread position: 42-480
Cow position: chr16:49235857-49235421 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 78

Conread position: 51-325
Cow position: chr16:34529619-34529896 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 47

Conread position: 52-185
Cow position: chr16:16276207-16276074 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 58

Conread position: 52-252
Cow position: chr16:36232311-36232115 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 23, 138

Conread position: 52-282
Cow position: chr16:42051082-42050857 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 94

Conread position: 52-288
Cow position: chr16:2483844-2483606 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 145

Conread position: 52-288
Cow position: chr16:10437542-10437779 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-308
Cow position: chr16:56551425-56551676 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-309
Cow position: chr16:1568155-1567897 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr16:2239434-2239183 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 26, 217

Conread position: 52-317
Cow position: chr16:28171060-28170797 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 15

Conread position: 52-317
Cow position: chr16:36282700-36282963 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 126

Conread position: 52-323
Cow position: chr16:28438490-28438215 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 178
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 32

Conread position: 52-324
Cow position: chr16:6549225-6548952 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-324
Cow position: chr16:19713585-19713317 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 52-324
Cow position: chr16:25084920-25085193 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-331
Cow position: chr16:836328-836608 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-336
Cow position: chr16:31592605-31592323 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 200

Conread position: 52-341
Cow position: chr16:32039-32333 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 129

Conread position: 52-347
Cow position: chr16:2728002-2727694 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 209

Conread position: 52-347
Cow position: chr16:15492007-15492303 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 287

Conread position: 52-347
Cow position: chr16:26663048-26663344 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 33

Conread position: 52-347
Cow position: chr16:29046321-29046617 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 285

Conread position: 52-349
Cow position: chr16:6942923-6943235 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr16:24155145-24154847 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 120, 148

Conread position: 52-359
Cow position: chr16:25187942-25188252 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 142

Conread position: 52-390
Cow position: chr16:6967029-6967357 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 220
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 149

Conread position: 52-406
Cow position: chr16:44966472-44966812 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 22, 46

Conread position: 52-414
Cow position: chr16:335593-335947 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 53

Conread position: 52-414
Cow position: chr16:9929840-9930197 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 81

Conread position: 52-421
Cow position: chr16:32935458-32935839 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 219

Conread position: 52-478
Cow position: chr16:42740123-42739696 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 104

Conread position: 53-324
Cow position: chr16:10808455-10808722 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 61

Conread position: 53-439
Cow position: chr16:49257282-49256896 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 71

Conread position: 53-480
Cow position: chr16:25156920-25156495 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 53

Conread position: 54-288
Cow position: chr16:14666528-14666293 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr16:27734502-27734266 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr16:40296877-40296642 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 54-304
Cow position: chr16:9777387-9777637 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 25

Conread position: 54-304
Cow position: chr16:12538622-12538373 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 76

Conread position: 54-304
Cow position: chr16:15184105-15184355 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 83

Conread position: 54-304
Cow position: chr16:15566051-15566296 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 136

Conread position: 54-309
Cow position: chr16:8816803-8816547 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr16:25341266-25341522 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr16:25440919-25441181 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr16:25458170-25457908 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-347
Cow position: chr16:407733-407437 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 260

Conread position: 54-347
Cow position: chr16:5483624-5483918 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 248

Conread position: 54-347
Cow position: chr16:23982612-23982905 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 237

Conread position: 54-349
Cow position: chr16:23253204-23252910 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 55-309
Cow position: chr16:43897965-43897714 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 107

Conread position: 56-347
Cow position: chr16:2411666-2411373 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 277

Conread position: 60-318
Cow position: chr16:11052469-11052726 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 157

Conread position: 60-324
Cow position: chr16:7905928-7906191 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 59

Conread position: 60-324
Cow position: chr16:20255004-20254739 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 60-324
Cow position: chr16:39820939-39821202 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 141

Conread position: 66-391
Cow position: chr16:47562996-47563337 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 80, 39

Conread position: 66-404
Cow position: chr16:10565968-10565636 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 214
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 29

Conread position: 67-372
Cow position: chr16:48681761-48681462 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 92

Conread position: 68-321
Cow position: chr16:51685753-51686004 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 185, 0

Conread position: 69-353
Cow position: chr16:41559975-41560251 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 5, 94

Conread position: 72-321
Cow position: chr16:41758127-41757879 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 72-346
Cow position: chr16:16030106-16030378 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 120, 127

Conread position: 85-382
Cow position: chr16:18500014-18499722 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 32

Conread position: 109-360
Cow position: chr16:30047850-30048102 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 177, 41

Conread position: 115-338
Cow position: chr16:23670264-23670048 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 82, 78

Conread position: 115-406
Cow position: chr16:52815124-52814836 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 107

Conread position: 127-470
Cow position: chr16:29033092-29033431 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 41

Conread position: 143-317
Cow position: chr16:31832022-31832198 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 72, 0

Conread position: 150-333
Cow position: chr16:25153128-25153304 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 150-417
Cow position: chr16:48626632-48626889 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 138, 85

Conread position: 182-447
Cow position: chr16:16273404-16273138 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 78

Conread position: 193-359
Cow position: chr16:4302887-4302715 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 125, 111

Conread position: 201-321
Cow position: chr16:29675930-29675810 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 203-480
Cow position: chr16:25257055-25257331 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 148

Conread position: 226-418
Cow position: chr16:5889392-5889583 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 119

Conread position: 238-433
Cow position: chr16:23807454-23807651 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 41, 52

Conread position: 271-480
Cow position: chr16:42050606-42050414 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 328-421
Cow position: chr16:25153959-25154053 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 2-309
Cow position: chr17:20183417-20183099 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 142

Conread position: 4-347
Cow position: chr17:27345617-27345972 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 128

Conread position: 10-478
Cow position: chr17:15370887-15371352 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 40

Conread position: 11-317
Cow position: chr17:2261949-2262246 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 25

Conread position: 11-325
Cow position: chr17:15143529-15143212 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 40

Conread position: 11-325
Cow position: chr17:43988375-43988688 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 13-325
Cow position: chr17:181203-181518 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 59

Conread position: 18-323
Cow position: chr17:2248735-2248433 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 18

Conread position: 38-288
Cow position: chr17:16859691-16859454 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 36, 13

Conread position: 38-383
Cow position: chr17:2173744-2174097 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 13

Conread position: 38-421
Cow position: chr17:4081506-4081883 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 14

Conread position: 45-347
Cow position: chr17:2579495-2579788 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 35, 178

Conread position: 51-309
Cow position: chr17:14894037-14894288 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 84

Conread position: 52-199
Cow position: chr17:22160793-22160941 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 52-235
Cow position: chr17:24780925-24781109 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 23, 0

Conread position: 52-294
Cow position: chr17:2556000-2556242 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 129

Conread position: 52-304
Cow position: chr17:6259722-6259974 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 186

Conread position: 52-304
Cow position: chr17:11087847-11087594 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 148

Conread position: 52-307
Cow position: chr17:9653579-9653323 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr17:3642959-3642701 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr17:18103803-18103550 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 200

Conread position: 52-309
Cow position: chr17:25737540-25737798 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr17:6089284-6089010 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr17:24633831-24634105 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr17:4059979-4060249 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 52-324
Cow position: chr17:18185655-18185385 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 52-324
Cow position: chr17:22132110-22132378 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 52-324
Cow position: chr17:23857158-23856884 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 52-325
Cow position: chr17:2287263-2287537 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr17:14217147-14216871 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-325
Cow position: chr17:15157086-15156809 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 122

Conread position: 52-325
Cow position: chr17:20665849-20665571 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr17:23324577-23324299 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-344
Cow position: chr17:8208984-8209282 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 0

Conread position: 52-344
Cow position: chr17:15435668-15435967 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-345
Cow position: chr17:1879969-1880267 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 91

Conread position: 52-347
Cow position: chr17:1946853-1947143 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 97

Conread position: 52-347
Cow position: chr17:35592090-35592390 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 295

Conread position: 52-348
Cow position: chr17:13929545-13929842 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-353
Cow position: chr17:1382937-1382631 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 295

Conread position: 52-360
Cow position: chr17:31199765-31199478 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 29, 78

Conread position: 52-361
Cow position: chr17:2147055-2147359 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 67, 13

Conread position: 52-413
Cow position: chr17:4295229-4295581 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 41

Conread position: 52-414
Cow position: chr17:20401552-20401898 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 53-317
Cow position: chr17:228425-228164 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 53-346
Cow position: chr17:2588191-2588476 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 269, 7

Conread position: 53-350
Cow position: chr17:152604-152300 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 171

Conread position: 53-413
Cow position: chr17:42264381-42264738 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 54

Conread position: 54-286
Cow position: chr17:40804695-40804928 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr17:19269487-19269231 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-331
Cow position: chr17:13856890-13856612 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 261

Conread position: 54-347
Cow position: chr17:15850275-15850570 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 258

Conread position: 54-480
Cow position: chr17:14325624-14325208 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 137

Conread position: 60-309
Cow position: chr17:16890004-16890258 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 252

Conread position: 60-324
Cow position: chr17:18026872-18026607 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 60-324
Cow position: chr17:22429598-22429338 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 95

Conread position: 60-346
Cow position: chr17:20087846-20087573 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 14, 32

Conread position: 60-353
Cow position: chr17:44853047-44852754 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 222

Conread position: 64-399
Cow position: chr17:6075681-6076013 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 218
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 101

Conread position: 66-395
Cow position: chr17:1658684-1658343 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 7, 205

Conread position: 68-417
Cow position: chr17:6002121-6001778 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 233
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 50

Conread position: 72-282
Cow position: chr17:249834-250047 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 98, 45

Conread position: 72-353
Cow position: chr17:16417936-16417659 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 37

Conread position: 72-360
Cow position: chr17:18325095-18324811 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 85, 44

Conread position: 74-385
Cow position: chr17:40834647-40834946 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 117, 23

Conread position: 75-321
Cow position: chr17:602523-602291 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 88, 0

Conread position: 93-271
Cow position: chr17:26205888-26205710 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 94-407
Cow position: chr17:3709284-3708975 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 246, 35

Conread position: 116-324
Cow position: chr17:1283763-1283555 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 137-303
Cow position: chr17:15323209-15323374 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 144-422
Cow position: chr17:18300819-18300564 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 219, 68

Conread position: 148-317
Cow position: chr17:43952589-43952419 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 6, 21

Conread position: 150-349
Cow position: chr17:31768063-31767858 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 159, 0

Conread position: 151-338
Cow position: chr17:22557599-22557786 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 72

Conread position: 154-324
Cow position: chr17:14041065-14040896 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 17

Conread position: 155-317
Cow position: chr17:34156109-34156272 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 156, 0

Conread position: 157-288
Cow position: chr17:36987688-36987557 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 114
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 185-295
Cow position: chr17:602694-602804 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 317-480
Cow position: chr17:36987552-36987395 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 1-317
Cow position: chr18:43146907-43146574 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 2-324
Cow position: chr18:16533999-16534338 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-347
Cow position: chr18:54044683-54044341 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 29, 124

Conread position: 3-318
Cow position: chr18:2019665-2019335 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 303

Conread position: 3-345
Cow position: chr18:53785858-53786218 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 292

Conread position: 3-480
Cow position: chr18:54171824-54171349 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 42

Conread position: 7-318
Cow position: chr18:35335504-35335831 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 7-324
Cow position: chr18:33268855-33269183 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 7

Conread position: 9-309
Cow position: chr18:47742064-47742361 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 27

Conread position: 11-325
Cow position: chr18:51341734-51342049 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 36-289
Cow position: chr18:114463-114712 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 21

Conread position: 38-390
Cow position: chr18:29048494-29048137 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 232
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 111

Conread position: 52-216
Cow position: chr18:43201139-43201304 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 52-248
Cow position: chr18:54024274-54024078 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 52-270
Cow position: chr18:18089388-18089172 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 200

Conread position: 52-303
Cow position: chr18:19352470-19352722 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr18:52651012-52651257 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 36

Conread position: 52-309
Cow position: chr18:51480924-51481182 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr18:55088840-55088582 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-318
Cow position: chr18:33335952-33336214 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 122

Conread position: 52-323
Cow position: chr18:22602572-22602846 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr18:33953484-33953216 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 177

Conread position: 52-323
Cow position: chr18:51689709-51689983 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr18:6869174-6868901 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr18:19539495-19539227 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 201

Conread position: 52-324
Cow position: chr18:23944290-23944015 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr18:11275021-11274743 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr18:16078802-16079078 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr18:24040648-24040343 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-361
Cow position: chr18:9186682-9186381 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 207
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 71

Conread position: 52-390
Cow position: chr18:36258278-36257932 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 198

Conread position: 52-394
Cow position: chr18:16877562-16877890 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 76

Conread position: 52-414
Cow position: chr18:2886936-2886572 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 52-421
Cow position: chr18:54269670-54270032 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 270
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 45

Conread position: 53-344
Cow position: chr18:51462989-51462695 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 45

Conread position: 53-414
Cow position: chr18:16843250-16842892 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 53

Conread position: 53-477
Cow position: chr18:29236896-29237321 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 63

Conread position: 54-238
Cow position: chr18:25350752-25350937 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 54-246
Cow position: chr18:32652306-32652499 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 20, 0

Conread position: 54-304
Cow position: chr18:14416063-14416313 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 194

Conread position: 54-309
Cow position: chr18:23797734-23797990 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr18:27838228-27837974 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 54-309
Cow position: chr18:28973816-28973560 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr18:40478470-40478725 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 198

Conread position: 54-309
Cow position: chr18:41840738-41840482 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-347
Cow position: chr18:36508420-36508713 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 256

Conread position: 54-347
Cow position: chr18:37505150-37505443 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 193

Conread position: 54-349
Cow position: chr18:16176531-16176235 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 30, 216

Conread position: 56-322
Cow position: chr18:14130473-14130741 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 60-324
Cow position: chr18:32293861-32294116 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 14, 53

Conread position: 60-324
Cow position: chr18:39748671-39748935 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 217

Conread position: 60-324
Cow position: chr18:47719492-47719226 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-324
Cow position: chr18:48221972-48222236 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 169

Conread position: 60-331
Cow position: chr18:33358960-33359232 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 66

Conread position: 60-345
Cow position: chr18:1521221-1521525 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 62-325
Cow position: chr18:51310680-51310942 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 218

Conread position: 62-353
Cow position: chr18:51258078-51258372 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 66-348
Cow position: chr18:46869079-46868807 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 34

Conread position: 66-372
Cow position: chr18:54003616-54003929 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 8, 28

Conread position: 72-361
Cow position: chr18:46877902-46877615 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 258, 89

Conread position: 72-387
Cow position: chr18:36211012-36210698 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 262, 112

Conread position: 72-421
Cow position: chr18:37599432-37599088 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 34

Conread position: 82-322
Cow position: chr18:5980549-5980785 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 84-332
Cow position: chr18:44601637-44601880 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 120, 168

Conread position: 91-347
Cow position: chr18:27987185-27987444 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 207

Conread position: 114-324
Cow position: chr18:17992273-17992063 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 118-286
Cow position: chr18:45958870-45959036 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 141-414
Cow position: chr18:29763545-29763812 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 86

Conread position: 150-478
Cow position: chr18:56462719-56462396 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 165-375
Cow position: chr18:51629645-51629845 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 193, 24

Conread position: 174-324
Cow position: chr18:24700907-24700755 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 201-331
Cow position: chr18:55504758-55504630 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 53

Conread position: 242-421
Cow position: chr18:35289592-35289773 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 2-346
Cow position: chr19:76229-75882 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 43

Conread position: 3-199
Cow position: chr19:30372307-30372511 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 136

Conread position: 3-309
Cow position: chr19:170717-170400 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 157

Conread position: 3-474
Cow position: chr19:32223414-32222937 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 42

Conread position: 7-288
Cow position: chr19:439614-439331 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 23, 104

Conread position: 9-277
Cow position: chr19:350252-349976 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 0

Conread position: 11-317
Cow position: chr19:37948-38251 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-317
Cow position: chr19:32212018-32211717 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 25

Conread position: 43-480
Cow position: chr19:352913-352463 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 363

Conread position: 44-410
Cow position: chr19:42248887-42249253 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 112

Conread position: 51-480
Cow position: chr19:377816-377396 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 138

Conread position: 52-186
Cow position: chr19:34509-34640 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 52-269
Cow position: chr19:40887563-40887350 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 132

Conread position: 52-280
Cow position: chr19:32244773-32245002 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-282
Cow position: chr19:39688619-39688847 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 52-304
Cow position: chr19:7488402-7488655 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr19:32665619-32665867 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 52-304
Cow position: chr19:40852349-40852096 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr19:20104801-20105060 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr19:33873515-33873773 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-310
Cow position: chr19:893524-893267 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 66

Conread position: 52-317
Cow position: chr19:687154-687419 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 155

Conread position: 52-317
Cow position: chr19:28593368-28593619 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 22, 99

Conread position: 52-321
Cow position: chr19:17018554-17018811 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 32

Conread position: 52-324
Cow position: chr19:39546717-39546973 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 9

Conread position: 52-325
Cow position: chr19:772688-772964 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr19:7342157-7342435 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-325
Cow position: chr19:52151742-52151463 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-349
Cow position: chr19:172300-172598 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 280

Conread position: 52-349
Cow position: chr19:43143805-43144109 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-406
Cow position: chr19:680527-680174 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 225
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 163, 54

Conread position: 52-421
Cow position: chr19:35376876-35377237 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 161

Conread position: 53-247
Cow position: chr19:261534-261728 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 23, 151

Conread position: 53-323
Cow position: chr19:1032166-1032436 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 53-395
Cow position: chr19:6553693-6554026 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 40

Conread position: 54-179
Cow position: chr19:55078837-55078963 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 54-250
Cow position: chr19:4385572-4385769 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 11, 63

Conread position: 54-286
Cow position: chr19:204052-204285 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 54-288
Cow position: chr19:2274287-2274052 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-331
Cow position: chr19:28581565-28581290 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 54-347
Cow position: chr19:10672215-10671923 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chr19:33941703-33941995 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 64

Conread position: 54-347
Cow position: chr19:39390599-39390893 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-413
Cow position: chr19:15953944-15954285 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 27, 109

Conread position: 60-184
Cow position: chr19:32237585-32237460 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 60-324
Cow position: chr19:416758-417022 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 241

Conread position: 64-322
Cow position: chr19:7449922-7449669 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 85

Conread position: 66-414
Cow position: chr19:30755284-30755622 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 64

Conread position: 70-390
Cow position: chr19:32202854-32203168 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 220, 59

Conread position: 72-249
Cow position: chr19:42299388-42299209 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 72-421
Cow position: chr19:42649002-42648657 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 181

Conread position: 77-224
Cow position: chr19:31341835-31341984 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 119-324
Cow position: chr19:28376641-28376848 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 120-349
Cow position: chr19:40817545-40817314 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 33, 26

Conread position: 122-263
Cow position: chr19:4532624-4532483 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 125-347
Cow position: chr19:29209762-29209981 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 141-286
Cow position: chr19:439282-439137 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 141-309
Cow position: chr19:5729007-5729176 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 159-324
Cow position: chr19:341418-341583 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 177-480
Cow position: chr19:163215-162908 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 133, 168

Conread position: 178-422
Cow position: chr19:27037735-27037492 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 179, 60

Conread position: 183-475
Cow position: chr19:42906-43195 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 205

Conread position: 187-480
Cow position: chr19:27052623-27052342 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 201-323
Cow position: chr19:5208411-5208535 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 258-480
Cow position: chr19:263099-263323 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 167

Conread position: 260-480
Cow position: chr19:137058-136841 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 296-477
Cow position: chr19:47610413-47610229 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 296-479
Cow position: chr19:44532446-44532632 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 154
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 59, 149

Conread position: 1-324
Cow position: chr2:422537-422872 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 122

Conread position: 1-324
Cow position: chr2:10711964-10711632 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 2-264
Cow position: chr2:52655936-52656210 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 29, 127

Conread position: 2-310
Cow position: chr2:14560666-14560970 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 254

Conread position: 2-317
Cow position: chr2:2363664-2363982 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-324
Cow position: chr2:10843872-10843546 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 63

Conread position: 2-347
Cow position: chr2:5481175-5480842 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 59

Conread position: 2-439
Cow position: chr2:7901752-7902194 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 202

Conread position: 3-186
Cow position: chr2:15062830-15062654 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 37, 21

Conread position: 3-195
Cow position: chr2:6877958-6878153 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 3-224
Cow position: chr2:56438253-56438027 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 14

Conread position: 3-280
Cow position: chr2:61130830-61130573 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 211
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 12, 8

Conread position: 3-307
Cow position: chr2:52152385-52152077 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 97

Conread position: 3-317
Cow position: chr2:212751-212423 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 245

Conread position: 3-324
Cow position: chr2:2102000-2101666 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-324
Cow position: chr2:6772704-6772368 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 260

Conread position: 3-325
Cow position: chr2:2380593-2380916 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 94

Conread position: 3-325
Cow position: chr2:5905380-5905058 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 233

Conread position: 3-331
Cow position: chr2:53329216-53329557 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 320

Conread position: 3-347
Cow position: chr2:13046224-13045879 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 115

Conread position: 3-350
Cow position: chr2:49604190-49604544 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 339

Conread position: 3-479
Cow position: chr2:36054171-36053698 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 39

Conread position: 7-323
Cow position: chr2:3325074-3324759 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 26

Conread position: 9-325
Cow position: chr2:25030983-25030667 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 27

Conread position: 11-325
Cow position: chr2:41686008-41686323 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 40

Conread position: 11-325
Cow position: chr2:52615966-52616279 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-358
Cow position: chr2:26921191-26921538 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 21

Conread position: 14-480
Cow position: chr2:16288718-16289184 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 166

Conread position: 27-399
Cow position: chr2:3837492-3837120 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 59

Conread position: 37-264
Cow position: chr2:45968835-45968613 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 217, 176

Conread position: 38-242
Cow position: chr2:54649302-54649100 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 38-353
Cow position: chr2:78761992-78762307 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 14

Conread position: 44-480
Cow position: chr2:15578048-15577611 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 86

Conread position: 51-325
Cow position: chr2:45213759-45213480 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-197
Cow position: chr2:32458476-32458332 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 97

Conread position: 52-209
Cow position: chr2:26865023-26864866 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 8

Conread position: 52-235
Cow position: chr2:24145807-24145985 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 97

Conread position: 52-277
Cow position: chr2:202121-201908 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 52-279
Cow position: chr2:85356240-85356019 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 22, 199

Conread position: 52-288
Cow position: chr2:22077323-22077558 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 24, 78

Conread position: 52-304
Cow position: chr2:50077128-50077380 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 52-309
Cow position: chr2:2184725-2184467 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr2:4404816-4404559 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 181

Conread position: 52-309
Cow position: chr2:16899778-16900038 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr2:2413265-2412998 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr2:51990999-51990732 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-318
Cow position: chr2:10612096-10611828 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 52-318
Cow position: chr2:52062198-52062464 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-318
Cow position: chr2:59414149-59413882 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-320
Cow position: chr2:5485711-5485452 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 25, 37

Conread position: 52-322
Cow position: chr2:80516602-80516862 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 98, 32

Conread position: 52-323
Cow position: chr2:6960277-6960550 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 128

Conread position: 52-323
Cow position: chr2:41656614-41656887 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 204

Conread position: 52-323
Cow position: chr2:49471778-49472052 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr2:57142155-57141881 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr2:80956105-80955833 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr2:11969239-11968965 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 52-324
Cow position: chr2:44106581-44106305 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 52-324
Cow position: chr2:82167140-82167413 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 52-325
Cow position: chr2:39421109-39421388 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr2:44090831-44091110 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr2:47038881-47038605 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 185

Conread position: 52-344
Cow position: chr2:9907444-9907743 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-344
Cow position: chr2:44935556-44935261 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-345
Cow position: chr2:175997-175703 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 290

Conread position: 52-347
Cow position: chr2:10269129-10268833 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 79

Conread position: 52-347
Cow position: chr2:47810542-47810839 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 261

Conread position: 52-347
Cow position: chr2:53473626-53473333 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 150

Conread position: 52-347
Cow position: chr2:81256349-81256631 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 92

Conread position: 52-369
Cow position: chr2:19009765-19010082 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 142

Conread position: 52-387
Cow position: chr2:20903615-20903302 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 97

Conread position: 52-395
Cow position: chr2:7211232-7211572 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 53

Conread position: 52-395
Cow position: chr2:50321810-50322149 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 22, 54

Conread position: 52-421
Cow position: chr2:42333763-42333374 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 36

Conread position: 52-472
Cow position: chr2:39621819-39622250 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 94

Conread position: 52-475
Cow position: chr2:2356943-2356517 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 210

Conread position: 52-480
Cow position: chr2:14822032-14822459 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 294

Conread position: 52-480
Cow position: chr2:28621295-28620888 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 53-309
Cow position: chr2:57334729-57334985 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 248

Conread position: 53-324
Cow position: chr2:44991749-44991492 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 178

Conread position: 53-324
Cow position: chr2:72922299-72922027 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-345
Cow position: chr2:5870806-5870528 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 21, 7

Conread position: 53-379
Cow position: chr2:59963697-59963371 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 77

Conread position: 53-399
Cow position: chr2:51305203-51304862 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 203

Conread position: 53-473
Cow position: chr2:36031203-36030788 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 93

Conread position: 53-480
Cow position: chr2:1673134-1672717 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 104

Conread position: 53-480
Cow position: chr2:34565394-34564981 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 54-209
Cow position: chr2:8118096-8118252 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 54-288
Cow position: chr2:65938916-65938682 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 140

Conread position: 54-298
Cow position: chr2:283159-282914 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr2:10186700-10186444 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr2:24921932-24922189 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-317
Cow position: chr2:5813869-5813587 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 54-347
Cow position: chr2:11159593-11159300 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 94

Conread position: 54-347
Cow position: chr2:28650694-28650405 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 123

Conread position: 54-347
Cow position: chr2:36979909-36980202 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 83

Conread position: 54-347
Cow position: chr2:42671854-42671561 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 130

Conread position: 55-288
Cow position: chr2:50983694-50983461 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 157

Conread position: 60-228
Cow position: chr2:10730017-10729849 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 124

Conread position: 60-310
Cow position: chr2:26868810-26869057 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 60-317
Cow position: chr2:44346255-44346513 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 60-324
Cow position: chr2:46946207-46946471 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 192

Conread position: 60-346
Cow position: chr2:78741669-78741956 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 265

Conread position: 60-349
Cow position: chr2:16076758-16076467 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 181

Conread position: 61-347
Cow position: chr2:28792791-28793079 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 250

Conread position: 62-324
Cow position: chr2:32654877-32655140 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 22

Conread position: 64-353
Cow position: chr2:290287-290001 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 20

Conread position: 65-324
Cow position: chr2:41172222-41172484 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 65-480
Cow position: chr2:28643579-28643179 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 66-393
Cow position: chr2:43959150-43959459 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 154

Conread position: 66-433
Cow position: chr2:35352911-35353271 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 222

Conread position: 67-390
Cow position: chr2:63293019-63292694 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 102

Conread position: 69-361
Cow position: chr2:77208194-77208482 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 106, 115

Conread position: 69-390
Cow position: chr2:28747011-28747327 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 37

Conread position: 71-392
Cow position: chr2:20874624-20874307 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 294, 65

Conread position: 72-216
Cow position: chr2:52173773-52173630 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 72-235
Cow position: chr2:6638689-6638852 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 72-361
Cow position: chr2:11691736-11692015 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 262, 107

Conread position: 72-361
Cow position: chr2:15580432-15580148 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 175, 62

Conread position: 72-361
Cow position: chr2:45921706-45921422 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 251, 96

Conread position: 72-395
Cow position: chr2:75676353-75676040 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 173, 15

Conread position: 72-407
Cow position: chr2:72108979-72108657 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 138

Conread position: 76-344
Cow position: chr2:768839-768562 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 81, 136

Conread position: 77-414
Cow position: chr2:32389342-32389680 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 182

Conread position: 78-352
Cow position: chr2:47603896-47603631 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 56, 112

Conread position: 89-324
Cow position: chr2:4926607-4926372 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 106

Conread position: 90-309
Cow position: chr2:67419729-67419510 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 90-421
Cow position: chr2:74391546-74391203 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 79, 63

Conread position: 99-323
Cow position: chr2:5474095-5474321 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 212, 0

Conread position: 99-366
Cow position: chr2:28616626-28616362 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 102-323
Cow position: chr2:2088591-2088368 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 69, 132

Conread position: 150-390
Cow position: chr2:41146877-41147116 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 7

Conread position: 151-325
Cow position: chr2:54737139-54737315 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 160, 0

Conread position: 168-323
Cow position: chr2:49590049-49590204 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 180-470
Cow position: chr2:41149652-41149941 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 72

Conread position: 184-378
Cow position: chr2:85068895-85068713 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 168, 126

Conread position: 186-281
Cow position: chr2:49712815-49712910 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 201-324
Cow position: chr2:1490295-1490172 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 204-325
Cow position: chr2:57588381-57588505 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 107, 29

Conread position: 218-421
Cow position: chr2:73191648-73191850 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 136, 41

Conread position: 242-480
Cow position: chr2:15062337-15062106 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 48

Conread position: 247-442
Cow position: chr2:24393442-24393251 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 104, 134

Conread position: 254-408
Cow position: chr2:201724-201567 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 57

Conread position: 353-480
Cow position: chr2:5485452-5485331 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 365-480
Cow position: chr2:28616196-28616083 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 2-309
Cow position: chr20:24614518-24614839 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 9-480
Cow position: chr20:18315596-18315143 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 162

Conread position: 52-197
Cow position: chr20:11679064-11678918 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 52-216
Cow position: chr20:10841200-10841035 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 133

Conread position: 52-288
Cow position: chr20:28160822-28161053 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 22, 83

Conread position: 52-307
Cow position: chr20:3270750-3271006 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 181

Conread position: 52-309
Cow position: chr20:13762948-13763208 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-322
Cow position: chr20:15064814-15065083 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 54

Conread position: 52-322
Cow position: chr20:25961149-25961421 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 111

Conread position: 52-323
Cow position: chr20:5560669-5560397 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr20:3252088-3251816 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 168

Conread position: 52-325
Cow position: chr20:19437995-19438263 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 112

Conread position: 52-331
Cow position: chr20:7116423-7116142 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-344
Cow position: chr20:822813-823112 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-346
Cow position: chr20:13680011-13679717 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 78

Conread position: 52-347
Cow position: chr20:3684439-3684145 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 52-347
Cow position: chr20:5484235-5484534 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 294

Conread position: 52-347
Cow position: chr20:15292056-15292352 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-347
Cow position: chr20:29948545-29948841 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 287

Conread position: 52-360
Cow position: chr20:3033107-3033414 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 274

Conread position: 52-421
Cow position: chr20:31378838-31378471 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 22, 8

Conread position: 53-300
Cow position: chr20:20755402-20755153 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 55

Conread position: 53-376
Cow position: chr20:9953938-9953617 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 116

Conread position: 53-422
Cow position: chr20:8993597-8993218 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 32

Conread position: 54-285
Cow position: chr20:35119622-35119850 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 0

Conread position: 54-288
Cow position: chr20:23469611-23469383 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 133

Conread position: 54-288
Cow position: chr20:23798930-23799168 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 222

Conread position: 54-304
Cow position: chr20:30684383-30684619 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 130

Conread position: 54-309
Cow position: chr20:8004177-8003922 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 89

Conread position: 54-310
Cow position: chr20:21914375-21914632 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 200

Conread position: 54-347
Cow position: chr20:5534986-5535279 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 89

Conread position: 54-347
Cow position: chr20:12438713-12438419 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 142

Conread position: 54-347
Cow position: chr20:15097830-15097535 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 258

Conread position: 54-347
Cow position: chr20:25850943-25850650 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chr20:27869245-27869539 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 143

Conread position: 54-347
Cow position: chr20:28565548-28565254 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 257

Conread position: 55-423
Cow position: chr20:10856984-10856616 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 76

Conread position: 60-317
Cow position: chr20:8313386-8313127 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 30

Conread position: 61-418
Cow position: chr20:20905147-20904796 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 261, 84

Conread position: 72-260
Cow position: chr20:19367522-19367334 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 93, 125

Conread position: 72-319
Cow position: chr20:28476365-28476604 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 98, 76

Conread position: 72-407
Cow position: chr20:13434883-13434559 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 90, 14

Conread position: 75-276
Cow position: chr20:13665140-13664944 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 54

Conread position: 75-326
Cow position: chr20:35104562-35104309 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 92, 0

Conread position: 79-326
Cow position: chr20:28463551-28463796 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 187, 49

Conread position: 95-407
Cow position: chr20:22206626-22206938 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 22

Conread position: 109-345
Cow position: chr20:15947274-15947036 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 205, 92

Conread position: 111-324
Cow position: chr20:10846011-10845803 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 12, 0

Conread position: 159-421
Cow position: chr20:22717588-22717323 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 12, 64

Conread position: 176-346
Cow position: chr20:21393764-21393936 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 138, 0

Conread position: 176-393
Cow position: chr20:5465429-5465638 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 22

Conread position: 193-324
Cow position: chr20:19495171-19495304 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 2-324
Cow position: chr21:4456927-4457264 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 2-480
Cow position: chr21:23811976-23812469 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 328

Conread position: 3-309
Cow position: chr21:37045014-37045333 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 7-324
Cow position: chr21:1292075-1291753 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 7-344
Cow position: chr21:18820311-18819970 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 166

Conread position: 11-309
Cow position: chr21:2674501-2674189 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 42

Conread position: 11-323
Cow position: chr21:2476399-2476102 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 67, 25

Conread position: 48-323
Cow position: chr21:26650202-26650480 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 51-246
Cow position: chr21:4222523-4222333 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 112

Conread position: 52-181
Cow position: chr21:2769296-2769166 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 52-275
Cow position: chr21:992860-992640 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 52-298
Cow position: chr21:40271512-40271265 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 148

Conread position: 52-304
Cow position: chr21:48116268-48116519 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 68

Conread position: 52-309
Cow position: chr21:11453491-11453233 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-310
Cow position: chr21:20744600-20744345 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 202

Conread position: 52-317
Cow position: chr21:6339731-6339998 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr21:4090814-4091088 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr21:2529961-2529690 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 52-324
Cow position: chr21:13123839-13123568 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 112

Conread position: 52-325
Cow position: chr21:26638300-26638022 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-336
Cow position: chr21:4589826-4589541 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 160

Conread position: 52-338
Cow position: chr21:2416393-2416671 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 128

Conread position: 52-344
Cow position: chr21:4086966-4087260 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 75

Conread position: 52-344
Cow position: chr21:11505752-11506060 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-345
Cow position: chr21:7267380-7267074 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 219

Conread position: 52-346
Cow position: chr21:8678195-8677900 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 143
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr21:12055836-12055532 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-359
Cow position: chr21:46915753-46916069 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-360
Cow position: chr21:2510816-2511132 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-379
Cow position: chr21:23860956-23861271 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 118, 30

Conread position: 52-476
Cow position: chr21:9891758-9892198 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 42

Conread position: 52-480
Cow position: chr21:359181-359627 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 150

Conread position: 53-304
Cow position: chr21:3778932-3779184 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-324
Cow position: chr21:2502058-2502328 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 23, 90

Conread position: 53-325
Cow position: chr21:39425229-39425506 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 53-346
Cow position: chr21:3798205-3797910 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 54-283
Cow position: chr21:47948276-47948505 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 151

Conread position: 54-303
Cow position: chr21:10850247-10850496 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 166

Conread position: 54-304
Cow position: chr21:31559488-31559238 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 102

Conread position: 54-309
Cow position: chr21:10566840-10567091 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 158

Conread position: 54-309
Cow position: chr21:30599753-30599503 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 54-324
Cow position: chr21:2883581-2883311 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 142

Conread position: 54-347
Cow position: chr21:146090-146383 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 158

Conread position: 54-347
Cow position: chr21:1191330-1191624 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 143

Conread position: 54-347
Cow position: chr21:30561969-30562263 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-478
Cow position: chr21:4183692-4184094 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 76

Conread position: 60-264
Cow position: chr21:47939649-47939849 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 124

Conread position: 60-269
Cow position: chr21:3426658-3426868 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 60-307
Cow position: chr21:2788820-2788572 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 170

Conread position: 60-324
Cow position: chr21:4077012-4077277 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 169

Conread position: 60-324
Cow position: chr21:34293189-34293453 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 188

Conread position: 60-324
Cow position: chr21:35596541-35596804 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 169

Conread position: 60-480
Cow position: chr21:2541241-2540818 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 179

Conread position: 66-391
Cow position: chr21:445275-445584 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 216
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 8, 64

Conread position: 68-389
Cow position: chr21:26823053-26822731 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 212
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 13, 148

Conread position: 72-361
Cow position: chr21:21926522-21926227 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 203, 96

Conread position: 72-414
Cow position: chr21:21914471-21914815 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 45, 55

Conread position: 74-362
Cow position: chr21:6699388-6699107 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 12

Conread position: 74-390
Cow position: chr21:36714817-36715131 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 101, 154

Conread position: 86-347
Cow position: chr21:35143968-35144217 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 231, 110

Conread position: 89-347
Cow position: chr21:27282599-27282847 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 223, 56

Conread position: 90-359
Cow position: chr21:23601398-23601660 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 187, 128

Conread position: 104-291
Cow position: chr21:216507-216694 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 127, 67

Conread position: 125-478
Cow position: chr21:30226258-30226601 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 131-324
Cow position: chr21:34258745-34258551 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 90, 0

Conread position: 138-310
Cow position: chr21:33251757-33251929 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 81

Conread position: 143-325
Cow position: chr21:3615569-3615750 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 85, 0

Conread position: 148-392
Cow position: chr21:21517387-21517632 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 108

Conread position: 164-479
Cow position: chr21:9870024-9870329 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 179-346
Cow position: chr21:2716425-2716257 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 163, 0

Conread position: 222-473
Cow position: chr21:29105-29356 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-324
Cow position: chr22:525753-525428 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 43

Conread position: 2-324
Cow position: chr22:42771402-42771720 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 39

Conread position: 2-347
Cow position: chr22:36533812-36533452 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-379
Cow position: chr22:13675232-13674852 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 256
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 25

Conread position: 3-317
Cow position: chr22:16200414-16200733 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 24

Conread position: 3-324
Cow position: chr22:5933056-5932735 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 68

Conread position: 3-389
Cow position: chr22:15956767-15956380 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 28, 109

Conread position: 4-325
Cow position: chr22:537049-537371 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 32

Conread position: 7-338
Cow position: chr22:44475188-44475513 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 24, 224

Conread position: 7-480
Cow position: chr22:1270578-1270129 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 86

Conread position: 11-317
Cow position: chr22:20240886-20240583 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-323
Cow position: chr22:44369683-44369360 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 218

Conread position: 11-325
Cow position: chr22:27309818-27309503 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 39-324
Cow position: chr22:157924-157641 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 73

Conread position: 44-280
Cow position: chr22:8740900-8740686 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 44-385
Cow position: chr22:117862-117514 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 317

Conread position: 45-347
Cow position: chr22:5672724-5673027 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 13

Conread position: 51-407
Cow position: chr22:9273429-9273785 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 119, 64

Conread position: 52-235
Cow position: chr22:24949822-24950006 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 52-244
Cow position: chr22:37073221-37073028 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 22, 84

Conread position: 52-281
Cow position: chr22:46635714-46635492 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 36

Conread position: 52-303
Cow position: chr22:693618-693870 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 52-304
Cow position: chr22:21589316-21589569 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr22:36183751-36184001 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 52-306
Cow position: chr22:37131638-37131880 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 66

Conread position: 52-309
Cow position: chr22:1319389-1319647 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr22:327167-326911 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 112

Conread position: 52-317
Cow position: chr22:27284036-27284290 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 78

Conread position: 52-317
Cow position: chr22:46581593-46581329 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 98

Conread position: 52-318
Cow position: chr22:5233313-5233046 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr22:5308094-5308369 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 149

Conread position: 52-324
Cow position: chr22:15851322-15851584 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 52-325
Cow position: chr22:1878784-1879063 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 52-325
Cow position: chr22:6020654-6020932 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr22:35672363-35672086 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 27

Conread position: 52-325
Cow position: chr22:44489879-44490155 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-326
Cow position: chr22:10546637-10546915 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-346
Cow position: chr22:44352965-44352680 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 135

Conread position: 52-350
Cow position: chr22:34168324-34168622 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 225

Conread position: 52-360
Cow position: chr22:298343-298042 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 32, 78

Conread position: 52-362
Cow position: chr22:8874981-8875288 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 166

Conread position: 52-379
Cow position: chr22:1048401-1048721 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 55

Conread position: 52-394
Cow position: chr22:1321599-1321921 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 89

Conread position: 52-405
Cow position: chr22:7277514-7277863 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 52-412
Cow position: chr22:34598662-34599010 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 41

Conread position: 52-433
Cow position: chr22:11030952-11031335 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 52-435
Cow position: chr22:6503684-6503301 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 45

Conread position: 52-476
Cow position: chr22:41419702-41419286 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 317

Conread position: 52-480
Cow position: chr22:3306743-3306311 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 55

Conread position: 52-480
Cow position: chr22:8136207-8135786 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 16

Conread position: 52-480
Cow position: chr22:44609590-44609999 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 24

Conread position: 53-253
Cow position: chr22:36274803-36275003 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 112, 186

Conread position: 53-309
Cow position: chr22:10909840-10909583 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 53-317
Cow position: chr22:3278361-3278097 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 201

Conread position: 53-391
Cow position: chr22:309771-310105 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 195

Conread position: 54-248
Cow position: chr22:27386437-27386244 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 179

Conread position: 54-288
Cow position: chr22:560711-560476 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 130

Conread position: 54-288
Cow position: chr22:31313335-31313570 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr22:44396445-44396679 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 115

Conread position: 54-297
Cow position: chr22:42991166-42991410 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr22:31335039-31334788 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 96

Conread position: 54-309
Cow position: chr22:39469529-39469273 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr22:44933974-44934229 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 11

Conread position: 54-323
Cow position: chr22:17328745-17328475 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 253

Conread position: 54-347
Cow position: chr22:18816391-18816098 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 237

Conread position: 54-347
Cow position: chr22:19143705-19143411 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chr22:36861536-36861242 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 257

Conread position: 55-309
Cow position: chr22:15313962-15313702 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 56-480
Cow position: chr22:13917500-13917925 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 36

Conread position: 60-181
Cow position: chr22:1860811-1860689 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 110

Conread position: 60-273
Cow position: chr22:32485352-32485139 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 166

Conread position: 60-324
Cow position: chr22:36736763-36737024 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 77

Conread position: 60-324
Cow position: chr22:39882176-39881911 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-324
Cow position: chr22:46547664-46547399 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 63-324
Cow position: chr22:46853346-46853607 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 143

Conread position: 68-274
Cow position: chr22:11782520-11782317 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 173

Conread position: 68-322
Cow position: chr22:870858-870603 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 6, 0

Conread position: 69-359
Cow position: chr22:36581168-36580886 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 190
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 49

Conread position: 72-321
Cow position: chr22:35943193-35942948 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 155, 0

Conread position: 72-322
Cow position: chr22:41238186-41238434 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 86, 180

Conread position: 79-480
Cow position: chr22:1283629-1283236 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 10

Conread position: 80-341
Cow position: chr22:32347957-32347708 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 90-318
Cow position: chr22:18027311-18027538 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 99-231
Cow position: chr22:31936660-31936528 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 111-475
Cow position: chr22:23853383-23853746 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 58

Conread position: 115-324
Cow position: chr22:38938027-38937818 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 124-288
Cow position: chr22:45879545-45879380 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 136
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 112, 0

Conread position: 150-265
Cow position: chr22:48004350-48004462 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 168-325
Cow position: chr22:37266082-37266241 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 143, 0

Conread position: 168-347
Cow position: chr22:1860848-1861028 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 143, 175

Conread position: 171-323
Cow position: chr22:16813998-16814152 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 140, 0

Conread position: 218-324
Cow position: chr22:13773055-13773159 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 224-323
Cow position: chr22:24950261-24950362 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 296-477
Cow position: chr22:35907482-35907309 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 106

Conread position: 323-433
Cow position: chr22:37132147-37132257 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 323-480
Cow position: chr22:46547834-46547991 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-282
Cow position: chr23:2524270-2523974 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-324
Cow position: chr23:4510026-4510342 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 82

Conread position: 2-416
Cow position: chr23:4751929-4752344 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 279
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 16, 57

Conread position: 3-264
Cow position: chr23:3013574-3013851 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 0

Conread position: 3-430
Cow position: chr23:1327532-1327102 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 87

Conread position: 7-345
Cow position: chr23:7273579-7273918 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 139

Conread position: 7-347
Cow position: chr23:28913344-28913681 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 205

Conread position: 11-317
Cow position: chr23:4359785-4360089 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-317
Cow position: chr23:14974606-14974305 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 21

Conread position: 11-344
Cow position: chr23:19950628-19950295 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 25

Conread position: 14-317
Cow position: chr23:16616891-16616587 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 22

Conread position: 36-324
Cow position: chr23:31591825-31591537 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 44-360
Cow position: chr23:8980326-8980022 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 51

Conread position: 52-260
Cow position: chr23:1025069-1024863 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 32

Conread position: 52-286
Cow position: chr23:2795573-2795340 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 216

Conread position: 52-286
Cow position: chr23:22147258-22147023 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr23:2027127-2026874 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 52-304
Cow position: chr23:15525602-15525855 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr23:967353-967100 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 104

Conread position: 52-317
Cow position: chr23:20302207-20302471 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 24

Conread position: 52-317
Cow position: chr23:28217282-28217549 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-323
Cow position: chr23:31446807-31447081 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr23:15219900-15219626 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-344
Cow position: chr23:15177067-15177358 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 83

Conread position: 52-345
Cow position: chr23:2313245-2312948 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 131

Conread position: 52-345
Cow position: chr23:4434452-4434743 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 54

Conread position: 52-349
Cow position: chr23:5779094-5778797 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 8

Conread position: 52-351
Cow position: chr23:10903520-10903828 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 206
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 22, 299

Conread position: 52-394
Cow position: chr23:19332415-19332077 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 21, 141

Conread position: 52-480
Cow position: chr23:29474565-29474138 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 128

Conread position: 53-282
Cow position: chr23:5874781-5874559 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 21, 137

Conread position: 53-301
Cow position: chr23:20156224-20155973 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-309
Cow position: chr23:2716383-2716638 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 27, 65

Conread position: 54-235
Cow position: chr23:4816067-4816251 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr23:30636307-30636072 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 95

Conread position: 54-309
Cow position: chr23:4888669-4888923 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 121

Conread position: 54-309
Cow position: chr23:19489536-19489792 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 54-311
Cow position: chr23:36031379-36031121 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-324
Cow position: chr23:2574530-2574800 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 180

Conread position: 54-328
Cow position: chr23:27399498-27399771 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 184

Conread position: 54-347
Cow position: chr23:2757588-2757882 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 255

Conread position: 54-347
Cow position: chr23:3881706-3881417 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 30

Conread position: 54-347
Cow position: chr23:11778466-11778776 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 64

Conread position: 57-347
Cow position: chr23:4640627-4640336 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 254

Conread position: 60-288
Cow position: chr23:31595236-31595007 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 0

Conread position: 60-321
Cow position: chr23:6216573-6216833 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 30

Conread position: 60-324
Cow position: chr23:988641-988383 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 14, 56

Conread position: 60-324
Cow position: chr23:4276955-4277220 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 62-347
Cow position: chr23:14965748-14965464 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 56

Conread position: 66-324
Cow position: chr23:25684055-25683799 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 152

Conread position: 70-406
Cow position: chr23:16615983-16615651 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 13

Conread position: 72-322
Cow position: chr23:26836292-26836536 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 140, 0

Conread position: 72-379
Cow position: chr23:7047048-7046733 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 140

Conread position: 72-414
Cow position: chr23:38578287-38578631 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 183

Conread position: 74-216
Cow position: chr23:19450271-19450412 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 80-282
Cow position: chr23:2782410-2782213 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 28

Conread position: 97-324
Cow position: chr23:29452281-29452053 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 12

Conread position: 109-324
Cow position: chr23:2765403-2765188 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 109-414
Cow position: chr23:22875623-22875330 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 59

Conread position: 179-414
Cow position: chr23:31650790-31650559 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 113, 54

Conread position: 205-474
Cow position: chr23:1402736-1402471 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 50

Conread position: 1-264
Cow position: chr24:13524132-13524395 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 57

Conread position: 2-288
Cow position: chr24:15392296-15392025 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 43

Conread position: 2-347
Cow position: chr24:14585106-14585455 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 111

Conread position: 2-480
Cow position: chr24:16649287-16648814 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 40

Conread position: 3-348
Cow position: chr24:9092259-9091908 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 153

Conread position: 3-349
Cow position: chr24:12114027-12113665 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 28, 226

Conread position: 3-360
Cow position: chr24:40548892-40549268 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 4-480
Cow position: chr24:36560068-36559589 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 134

Conread position: 7-341
Cow position: chr24:6335713-6336048 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 180

Conread position: 11-285
Cow position: chr24:44017587-44017858 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 52-166
Cow position: chr24:14390657-14390542 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 52-188
Cow position: chr24:38635832-38635969 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 52-203
Cow position: chr24:39678487-39678640 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 52-220
Cow position: chr24:12131408-12131239 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 52-233
Cow position: chr24:12161956-12162134 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 9

Conread position: 52-285
Cow position: chr24:14885177-14884942 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 65

Conread position: 52-286
Cow position: chr24:1438105-1437875 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 52-304
Cow position: chr24:33933444-33933697 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr24:148541-148283 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr24:12485239-12484981 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-317
Cow position: chr24:6025017-6024753 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 123

Conread position: 52-317
Cow position: chr24:13188263-13188518 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 135

Conread position: 52-317
Cow position: chr24:33739258-33738995 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 159

Conread position: 52-318
Cow position: chr24:6084095-6084362 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr24:6434319-6434592 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 73

Conread position: 52-323
Cow position: chr24:8030229-8030501 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr24:12086276-12086549 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr24:6660530-6660246 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 106, 0

Conread position: 52-325
Cow position: chr24:16084582-16084303 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-345
Cow position: chr24:35838538-35838244 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 165

Conread position: 52-346
Cow position: chr24:14384535-14384242 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 52-347
Cow position: chr24:4415451-4415157 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-378
Cow position: chr24:6352255-6352584 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 208

Conread position: 52-395
Cow position: chr24:40654464-40654798 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 118

Conread position: 52-407
Cow position: chr24:7091517-7091165 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 32

Conread position: 52-414
Cow position: chr24:17303533-17303178 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 114, 44

Conread position: 52-421
Cow position: chr24:35841545-35841174 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 153

Conread position: 52-480
Cow position: chr24:12797690-12797265 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 252

Conread position: 53-317
Cow position: chr24:22793252-22793517 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 77

Conread position: 53-322
Cow position: chr24:37217084-37217348 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 72

Conread position: 53-360
Cow position: chr24:9188652-9188336 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 112

Conread position: 54-264
Cow position: chr24:22952216-22952427 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr24:17696893-17696642 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 154

Conread position: 54-309
Cow position: chr24:19833461-19833721 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 54-309
Cow position: chr24:29187363-29187619 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 142

Conread position: 57-347
Cow position: chr24:12335691-12335401 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 220

Conread position: 60-320
Cow position: chr24:12237140-12237400 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 241

Conread position: 61-324
Cow position: chr24:6145456-6145719 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 108

Conread position: 62-387
Cow position: chr24:12288307-12287982 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 12, 145

Conread position: 66-393
Cow position: chr24:6537632-6537951 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 8, 28

Conread position: 72-276
Cow position: chr24:14873254-14873047 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 158

Conread position: 74-421
Cow position: chr24:36707948-36708288 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 94

Conread position: 82-319
Cow position: chr24:6510723-6510485 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 156
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 172, 0

Conread position: 84-422
Cow position: chr24:12568347-12568678 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 273, 22

Conread position: 99-304
Cow position: chr24:6645828-6646034 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 101-413
Cow position: chr24:1447684-1447996 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 118

Conread position: 129-318
Cow position: chr24:7061545-7061734 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 143-317
Cow position: chr24:5993059-5992884 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 168, 0

Conread position: 150-390
Cow position: chr24:16376701-16376934 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 7, 49

Conread position: 174-421
Cow position: chr24:14333244-14333491 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 178-325
Cow position: chr24:43813969-43814120 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 133, 0

Conread position: 178-406
Cow position: chr24:38636810-38637039 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 19, 12

Conread position: 214-345
Cow position: chr24:6444523-6444655 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 54

Conread position: 300-414
Cow position: chr24:38005043-38004928 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 337-480
Cow position: chr24:12206273-12206132 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 2-317
Cow position: chr25:11375378-11375048 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 3-317
Cow position: chr25:26922199-26922517 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 291

Conread position: 3-323
Cow position: chr25:35362452-35362121 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 46

Conread position: 3-324
Cow position: chr25:17468725-17468395 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 263

Conread position: 3-340
Cow position: chr25:33665894-33665552 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 23

Conread position: 3-347
Cow position: chr25:26279236-26279589 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 316

Conread position: 3-347
Cow position: chr25:34347021-34346687 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 72

Conread position: 4-324
Cow position: chr25:18060617-18060295 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 138

Conread position: 4-421
Cow position: chr25:33243812-33244213 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 114

Conread position: 11-325
Cow position: chr25:18195101-18194786 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 21

Conread position: 52-270
Cow position: chr25:18027591-18027372 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-288
Cow position: chr25:25506685-25506920 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 52-297
Cow position: chr25:12942666-12942420 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr25:13781064-13781322 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 52-317
Cow position: chr25:20776864-20776601 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 79

Conread position: 52-317
Cow position: chr25:27022532-27022265 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr25:32580000-32580266 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 181

Conread position: 52-324
Cow position: chr25:14016202-14016472 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 9

Conread position: 52-324
Cow position: chr25:18275799-18275521 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr25:17589514-17589242 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 33

Conread position: 52-325
Cow position: chr25:19917118-19917396 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-347
Cow position: chr25:8674950-8675245 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 274

Conread position: 52-415
Cow position: chr25:23345305-23344952 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 52-419
Cow position: chr25:18093053-18093412 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 96

Conread position: 52-421
Cow position: chr25:11933491-11933125 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 35

Conread position: 52-421
Cow position: chr25:12759565-12759195 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 210

Conread position: 53-324
Cow position: chr25:34656410-34656139 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 77

Conread position: 53-345
Cow position: chr25:9544100-9544395 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 35

Conread position: 54-285
Cow position: chr25:20629614-20629834 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 64

Conread position: 54-304
Cow position: chr25:22147531-22147782 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-347
Cow position: chr25:18889978-18889685 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 60-324
Cow position: chr25:18303443-18303707 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 173

Conread position: 61-343
Cow position: chr25:36240599-36240875 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 191

Conread position: 64-288
Cow position: chr25:34014443-34014217 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 141

Conread position: 66-422
Cow position: chr25:18255318-18254963 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 59

Conread position: 72-286
Cow position: chr25:18421723-18421939 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 137, 57

Conread position: 89-395
Cow position: chr25:19288266-19287967 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 264, 40

Conread position: 171-331
Cow position: chr25:17560478-17560321 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 132, 0

Conread position: 172-323
Cow position: chr25:6172058-6172211 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 139, 0

Conread position: 207-309
Cow position: chr25:24659444-24659546 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-322
Cow position: chr26:12656284-12656598 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 114

Conread position: 3-309
Cow position: chr26:3691798-3692104 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 154

Conread position: 3-324
Cow position: chr26:12574405-12574081 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 102

Conread position: 3-338
Cow position: chr26:20262852-20263192 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 227
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 101

Conread position: 9-344
Cow position: chr26:2198644-2198980 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 27

Conread position: 11-349
Cow position: chr26:18852238-18852578 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 25

Conread position: 11-349
Cow position: chr26:18855107-18855447 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 25

Conread position: 51-325
Cow position: chr26:8869931-8870215 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-189
Cow position: chr26:20255107-20255247 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 9

Conread position: 52-249
Cow position: chr26:4334200-4334398 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 157
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 0

Conread position: 52-282
Cow position: chr26:23603711-23603481 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 54

Conread position: 52-308
Cow position: chr26:3030774-3030517 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 52-309
Cow position: chr26:5675214-5675472 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr26:30589322-30589059 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 202

Conread position: 52-317
Cow position: chr26:2352303-2352038 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-317
Cow position: chr26:15144705-15144438 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 52-323
Cow position: chr26:12588509-12588236 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 203

Conread position: 52-324
Cow position: chr26:9112793-9113067 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-331
Cow position: chr26:6849381-6849102 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 258

Conread position: 52-342
Cow position: chr26:11254001-11253709 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 278

Conread position: 52-344
Cow position: chr26:30782798-30783097 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-345
Cow position: chr26:4605128-4604837 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 110

Conread position: 52-388
Cow position: chr26:8283006-8282670 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 163

Conread position: 52-398
Cow position: chr26:12666161-12666504 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 153

Conread position: 53-317
Cow position: chr26:8918906-8919172 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 53-327
Cow position: chr26:4806485-4806226 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 110

Conread position: 53-412
Cow position: chr26:9849869-9849509 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 146

Conread position: 53-412
Cow position: chr26:9853379-9853020 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 53

Conread position: 53-480
Cow position: chr26:9845522-9845110 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 85

Conread position: 54-288
Cow position: chr26:19351457-19351222 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr26:9563300-9563045 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 95

Conread position: 54-347
Cow position: chr26:17396874-17396580 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 65-346
Cow position: chr26:1602127-1601843 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 91

Conread position: 178-341
Cow position: chr26:20255382-20255538 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 1-365
Cow position: chr27:25804957-25804589 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 258
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 30, 129

Conread position: 4-324
Cow position: chr27:27051611-27051949 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 141

Conread position: 4-349
Cow position: chr27:15278139-15277781 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 172

Conread position: 52-276
Cow position: chr27:2364742-2364968 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr27:15541321-15541595 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr27:5910855-5911128 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr27:16034400-16034124 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 20

Conread position: 52-341
Cow position: chr27:14460464-14460172 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-344
Cow position: chr27:27753204-27752912 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 269

Conread position: 52-405
Cow position: chr27:26556012-26555659 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 237

Conread position: 52-406
Cow position: chr27:6007013-6007352 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 229
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 96

Conread position: 54-288
Cow position: chr27:15638361-15638128 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 179

Conread position: 54-288
Cow position: chr27:23335156-23335408 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 19, 167

Conread position: 54-309
Cow position: chr27:893201-893457 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 81

Conread position: 54-309
Cow position: chr27:1209346-1209601 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 108

Conread position: 54-309
Cow position: chr27:9993211-9992953 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr27:26324809-26325065 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 94

Conread position: 54-347
Cow position: chr27:27662894-27663183 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 174

Conread position: 60-324
Cow position: chr27:16432420-16432681 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 124

Conread position: 60-347
Cow position: chr27:25002536-25002245 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 64-324
Cow position: chr27:16439329-16439593 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 71-402
Cow position: chr27:26035043-26034718 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 116

Conread position: 85-480
Cow position: chr27:8561572-8561961 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 39

Conread position: 99-387
Cow position: chr27:22316624-22316911 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 48

Conread position: 150-317
Cow position: chr27:28078539-28078706 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 51

Conread position: 3-184
Cow position: chr28:7817194-7817373 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 39

Conread position: 3-309
Cow position: chr28:5114827-5114517 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-324
Cow position: chr28:4380866-4380535 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 3-324
Cow position: chr28:9954109-9954442 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 3-480
Cow position: chr28:21358981-21359467 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 445

Conread position: 5-323
Cow position: chr28:13440883-13440566 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 31

Conread position: 6-324
Cow position: chr28:9155304-9154974 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 213

Conread position: 7-480
Cow position: chr28:5812684-5813145 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 34

Conread position: 11-347
Cow position: chr28:18181158-18180824 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 219
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 15

Conread position: 11-349
Cow position: chr28:14750547-14750887 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 21

Conread position: 35-480
Cow position: chr28:2989696-2989241 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 29

Conread position: 48-480
Cow position: chr28:5797465-5797893 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 78

Conread position: 51-288
Cow position: chr28:14705636-14705398 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 155

Conread position: 51-304
Cow position: chr28:1931949-1931695 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-177
Cow position: chr28:15951016-15951142 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 52-285
Cow position: chr28:12232962-12232731 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 23, 97

Conread position: 52-288
Cow position: chr28:33252349-33252585 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 159

Conread position: 52-309
Cow position: chr28:12150347-12150598 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 132

Conread position: 52-318
Cow position: chr28:8721411-8721146 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 171

Conread position: 52-324
Cow position: chr28:1387358-1387091 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 111

Conread position: 52-324
Cow position: chr28:2724854-2724581 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 238

Conread position: 52-324
Cow position: chr28:7002025-7002299 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 260

Conread position: 52-324
Cow position: chr28:24667615-24667888 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 235

Conread position: 52-325
Cow position: chr28:1953163-1953444 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr28:6780297-6780019 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr28:7822294-7822572 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr28:24587471-24587749 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-407
Cow position: chr28:34648980-34649336 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 117

Conread position: 52-414
Cow position: chr28:2846136-2845780 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 95

Conread position: 52-443
Cow position: chr28:10619073-10618695 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 60

Conread position: 52-443
Cow position: chr28:21325830-21326209 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 103

Conread position: 52-477
Cow position: chr28:7790250-7789823 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 97

Conread position: 53-279
Cow position: chr28:15920428-15920200 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 54-288
Cow position: chr28:782433-782668 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr28:1504890-1505125 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr28:5565901-5566127 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 76

Conread position: 54-288
Cow position: chr28:10581947-10581713 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 47

Conread position: 54-288
Cow position: chr28:12410183-12409952 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 60

Conread position: 54-288
Cow position: chr28:17667475-17667240 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr28:22261112-22260877 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 54-298
Cow position: chr28:29819772-29820017 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 54-303
Cow position: chr28:2083634-2083884 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 181

Conread position: 54-304
Cow position: chr28:1814829-1814578 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr28:8378603-8378863 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr28:13460008-13460264 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 54-309
Cow position: chr28:15377953-15377698 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 149

Conread position: 54-309
Cow position: chr28:17388520-17388776 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 54-347
Cow position: chr28:1167843-1167549 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 54-347
Cow position: chr28:3192753-3192459 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chr28:5751668-5751373 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 258

Conread position: 54-347
Cow position: chr28:7740524-7740813 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 151

Conread position: 54-347
Cow position: chr28:32792341-32792048 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 189

Conread position: 54-347
Cow position: chr28:34594017-34594311 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 142

Conread position: 55-331
Cow position: chr28:18520424-18520143 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 260

Conread position: 60-324
Cow position: chr28:2591959-2592224 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 60-328
Cow position: chr28:9137006-9136739 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 125

Conread position: 60-345
Cow position: chr28:7901399-7901698 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 64-249
Cow position: chr28:5800673-5800854 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 5

Conread position: 65-323
Cow position: chr28:17324301-17324036 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 16, 178

Conread position: 66-253
Cow position: chr28:17934985-17934800 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 97

Conread position: 74-276
Cow position: chr28:18101884-18101684 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 179, 0

Conread position: 85-395
Cow position: chr28:10463082-10462769 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 62

Conread position: 96-317
Cow position: chr28:485481-485259 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 103-282
Cow position: chr28:22828104-22828283 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 151, 12

Conread position: 105-346
Cow position: chr28:15682213-15682449 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 208, 13

Conread position: 119-326
Cow position: chr28:22233293-22233084 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 192, 81

Conread position: 119-476
Cow position: chr28:10071089-10071436 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 125-306
Cow position: chr28:13490261-13490442 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 143-288
Cow position: chr28:5937609-5937750 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 149-323
Cow position: chr28:30805553-30805377 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 162, 0

Conread position: 152-317
Cow position: chr28:6539124-6538958 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 134
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 159, 0

Conread position: 176-309
Cow position: chr28:26426090-26425957 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 189-345
Cow position: chr28:24652942-24652785 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 141, 0

Conread position: 209-410
Cow position: chr28:11357519-11357320 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 162

Conread position: 255-478
Cow position: chr28:7817379-7817607 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 69, 130

Conread position: 267-474
Cow position: chr28:5764499-5764706 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 106

Conread position: 328-480
Cow position: chr28:28117809-28117957 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 2-300
Cow position: chr29:17662861-17663155 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 187
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 80, 34

Conread position: 2-324
Cow position: chr29:21543427-21543094 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 152

Conread position: 3-286
Cow position: chr29:6266555-6266264 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 204

Conread position: 3-288
Cow position: chr29:45587407-45587121 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 133

Conread position: 3-304
Cow position: chr29:10824017-10823714 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-347
Cow position: chr29:16770067-16770421 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 327

Conread position: 3-480
Cow position: chr29:5983243-5982780 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 116

Conread position: 11-325
Cow position: chr29:610647-610332 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 25

Conread position: 14-309
Cow position: chr29:7840765-7841056 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 22

Conread position: 27-361
Cow position: chr29:16017174-16016843 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 43, 174

Conread position: 51-249
Cow position: chr29:32316042-32316241 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 23, 0

Conread position: 52-211
Cow position: chr29:13853021-13852863 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 117

Conread position: 52-288
Cow position: chr29:42650287-42650525 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 85

Conread position: 52-288
Cow position: chr29:42802147-42802385 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 85

Conread position: 52-303
Cow position: chr29:5957605-5957858 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr29:26164820-26164562 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-310
Cow position: chr29:15894848-15894589 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr29:670054-669788 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-317
Cow position: chr29:13582074-13582337 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 124

Conread position: 52-317
Cow position: chr29:18856942-18856675 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr29:35296876-35297143 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 98

Conread position: 52-318
Cow position: chr29:2841365-2841105 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 52-323
Cow position: chr29:27250332-27250066 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 102

Conread position: 52-324
Cow position: chr29:2466334-2466059 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr29:35196670-35196939 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 8

Conread position: 52-326
Cow position: chr29:19885072-19885351 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-335
Cow position: chr29:2750409-2750135 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 56

Conread position: 52-336
Cow position: chr29:25932542-25932258 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-347
Cow position: chr29:2689904-2690198 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 143

Conread position: 52-347
Cow position: chr29:16022532-16022828 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-353
Cow position: chr29:9643756-9643453 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 78

Conread position: 52-386
Cow position: chr29:30811534-30811859 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 52-402
Cow position: chr29:104569-104913 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 237

Conread position: 52-414
Cow position: chr29:803350-802986 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 33, 97

Conread position: 52-421
Cow position: chr29:1715246-1715613 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 68

Conread position: 53-204
Cow position: chr29:15969147-15968996 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 110

Conread position: 53-288
Cow position: chr29:10848105-10847853 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 53-309
Cow position: chr29:27980914-27980659 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 221

Conread position: 54-246
Cow position: chr29:12796361-12796168 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 27, 0

Conread position: 54-288
Cow position: chr29:40502976-40502743 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 174

Conread position: 54-303
Cow position: chr29:7431211-7430965 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 174

Conread position: 54-304
Cow position: chr29:14585932-14586177 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 51

Conread position: 54-304
Cow position: chr29:19623243-19622992 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-304
Cow position: chr29:19653109-19653363 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-304
Cow position: chr29:38226988-38227235 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 54-309
Cow position: chr29:48474-48220 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 194

Conread position: 54-309
Cow position: chr29:20251164-20251419 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 148

Conread position: 54-309
Cow position: chr29:32539815-32540070 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 81

Conread position: 54-309
Cow position: chr29:39079708-39079452 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 54-322
Cow position: chr29:10844249-10844513 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 177
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 138

Conread position: 54-324
Cow position: chr29:34799805-34799530 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-328
Cow position: chr29:45459719-45459994 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 93

Conread position: 54-347
Cow position: chr29:410521-410227 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-347
Cow position: chr29:10648247-10647953 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 257

Conread position: 54-347
Cow position: chr29:23975844-23976138 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 257

Conread position: 54-347
Cow position: chr29:43322564-43322852 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 139

Conread position: 55-347
Cow position: chr29:2099850-2100143 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 256

Conread position: 57-421
Cow position: chr29:15950184-15949821 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 254

Conread position: 58-321
Cow position: chr29:8062892-8062622 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 178
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 163

Conread position: 60-324
Cow position: chr29:11049289-11049553 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 94

Conread position: 60-324
Cow position: chr29:27040754-27040497 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 77

Conread position: 60-324
Cow position: chr29:43365989-43365727 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 15, 92

Conread position: 61-209
Cow position: chr29:16109738-16109887 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 69-326
Cow position: chr29:4056169-4056427 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 162, 0

Conread position: 80-323
Cow position: chr29:34925505-34925755 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 89-392
Cow position: chr29:19893811-19894114 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 82, 40

Conread position: 91-323
Cow position: chr29:13669247-13669021 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 131, 81

Conread position: 123-317
Cow position: chr29:31181490-31181684 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 188, 25

Conread position: 134-324
Cow position: chr29:21426939-21426755 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 130, 0

Conread position: 141-415
Cow position: chr29:24709156-24708884 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 96, 30

Conread position: 168-407
Cow position: chr29:19906753-19906987 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 181, 142

Conread position: 184-476
Cow position: chr29:14086313-14086027 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 42

Conread position: 193-309
Cow position: chr29:15968717-15968601 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 245-450
Cow position: chr29:8331136-8330938 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 247-421
Cow position: chr29:13648882-13649052 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 119, 74

Conread position: 334-480
Cow position: chr29:2749931-2749790 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 21, 112

Conread position: 2-282
Cow position: chr3:66990656-66990937 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 101

Conread position: 2-298
Cow position: chr3:70083790-70083487 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 55

Conread position: 2-308
Cow position: chr3:34396204-34395905 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 32

Conread position: 2-324
Cow position: chr3:9716669-9717003 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 256

Conread position: 2-345
Cow position: chr3:42580110-42579751 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-349
Cow position: chr3:55229841-55229483 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 3-230
Cow position: chr3:43039836-43039607 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 27, 129

Conread position: 3-317
Cow position: chr3:32623166-32622850 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 27, 116

Conread position: 3-324
Cow position: chr3:66638596-66638933 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 3-325
Cow position: chr3:6782244-6782582 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-341
Cow position: chr3:19938769-19939097 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 69

Conread position: 3-349
Cow position: chr3:24314335-24314691 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-373
Cow position: chr3:83234268-83233885 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 237

Conread position: 4-324
Cow position: chr3:31354403-31354072 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 5-317
Cow position: chr3:22335770-22336075 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 31

Conread position: 11-318
Cow position: chr3:47081775-47081471 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-349
Cow position: chr3:47179320-47178981 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 27-480
Cow position: chr3:48231118-48230662 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 103

Conread position: 41-304
Cow position: chr3:30929549-30929815 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 159

Conread position: 41-406
Cow position: chr3:77442793-77443150 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 41, 85

Conread position: 47-414
Cow position: chr3:34093533-34093163 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 147

Conread position: 51-386
Cow position: chr3:60210255-60209932 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 143

Conread position: 52-179
Cow position: chr3:37968999-37969127 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 52-235
Cow position: chr3:57856657-57856841 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 52-237
Cow position: chr3:54864779-54864593 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 33, 0

Conread position: 52-244
Cow position: chr3:46677994-46677798 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 52-250
Cow position: chr3:17828729-17828530 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 52-253
Cow position: chr3:32146170-32145970 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 177

Conread position: 52-273
Cow position: chr3:5047264-5047042 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-279
Cow position: chr3:15989115-15988879 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-282
Cow position: chr3:18356967-18356736 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 52-288
Cow position: chr3:13518361-13518137 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 186
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 125

Conread position: 52-288
Cow position: chr3:18811424-18811660 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 15

Conread position: 52-288
Cow position: chr3:36882002-36881765 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 148

Conread position: 52-288
Cow position: chr3:64017444-64017207 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr3:45895638-45895385 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr3:45974417-45974670 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr3:49545287-49545034 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr3:594495-594754 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr3:5995776-5995519 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 52-309
Cow position: chr3:56340507-56340249 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr3:2917381-2917648 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr3:7158812-7158546 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 52-317
Cow position: chr3:7168714-7168979 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 78

Conread position: 52-317
Cow position: chr3:41211817-41211550 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr3:49614057-49613790 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-318
Cow position: chr3:66891041-66890776 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 112

Conread position: 52-323
Cow position: chr3:36117596-36117857 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 95

Conread position: 52-323
Cow position: chr3:64028165-64027892 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-323
Cow position: chr3:68700049-68699779 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 141

Conread position: 52-324
Cow position: chr3:2654026-2654295 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 204

Conread position: 52-324
Cow position: chr3:5829708-5829436 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 151

Conread position: 52-324
Cow position: chr3:31898056-31897784 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 52-325
Cow position: chr3:3522941-3523219 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr3:14439841-14439564 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr3:18859340-18859612 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 36

Conread position: 52-325
Cow position: chr3:46861383-46861105 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-341
Cow position: chr3:58947378-58947665 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 252

Conread position: 52-341
Cow position: chr3:77423601-77423882 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 52-344
Cow position: chr3:45032661-45032960 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-346
Cow position: chr3:18463665-18463374 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 42

Conread position: 52-346
Cow position: chr3:42432151-42432445 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 144

Conread position: 52-346
Cow position: chr3:49677707-49678002 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 81

Conread position: 52-346
Cow position: chr3:51940496-51940210 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 279, 18

Conread position: 52-346
Cow position: chr3:64650546-64650848 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 52-347
Cow position: chr3:5954266-5953971 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 259

Conread position: 52-347
Cow position: chr3:26822578-26822291 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 9

Conread position: 52-347
Cow position: chr3:48060910-48060616 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 31

Conread position: 52-347
Cow position: chr3:57484807-57484515 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 52-347
Cow position: chr3:77474680-77474979 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 294

Conread position: 52-353
Cow position: chr3:26949431-26949734 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 113

Conread position: 52-390
Cow position: chr3:3054519-3054853 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 109

Conread position: 52-402
Cow position: chr3:19891060-19890717 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 231
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 65

Conread position: 52-402
Cow position: chr3:49333308-49333654 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 116, 237

Conread position: 52-413
Cow position: chr3:3980309-3980670 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 142

Conread position: 52-414
Cow position: chr3:4027191-4027557 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-439
Cow position: chr3:39326636-39327024 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 348

Conread position: 52-480
Cow position: chr3:6685380-6685796 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 178

Conread position: 52-480
Cow position: chr3:19802580-19802998 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 36

Conread position: 52-480
Cow position: chr3:24591720-24591301 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 150

Conread position: 52-480
Cow position: chr3:29595117-29595541 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 78

Conread position: 52-480
Cow position: chr3:52864553-52864120 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 232

Conread position: 52-480
Cow position: chr3:64358247-64357824 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 74

Conread position: 53-287
Cow position: chr3:50915225-50915462 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 53-297
Cow position: chr3:19943980-19944216 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 53-317
Cow position: chr3:56321237-56321502 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 141

Conread position: 53-324
Cow position: chr3:2633846-2634113 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 202

Conread position: 53-324
Cow position: chr3:57499601-57499353 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 62

Conread position: 53-444
Cow position: chr3:2908432-2908054 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 54-240
Cow position: chr3:38866320-38866504 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 54-288
Cow position: chr3:5883463-5883696 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 65

Conread position: 54-288
Cow position: chr3:18542486-18542251 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr3:19757037-19756802 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr3:40823309-40823544 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 31

Conread position: 54-297
Cow position: chr3:30314488-30314732 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-303
Cow position: chr3:53515535-53515785 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 54-304
Cow position: chr3:2711039-2710789 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 115

Conread position: 54-309
Cow position: chr3:23214139-23213884 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 56

Conread position: 54-309
Cow position: chr3:49137618-49137362 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 142

Conread position: 54-309
Cow position: chr3:72629991-72630248 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr3:75041244-75040992 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 54-311
Cow position: chr3:23291484-23291226 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 72

Conread position: 54-323
Cow position: chr3:59861288-59861558 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-343
Cow position: chr3:10239571-10239859 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 268

Conread position: 54-347
Cow position: chr3:21182762-21182471 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 182

Conread position: 54-347
Cow position: chr3:34030976-34030683 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 83

Conread position: 54-347
Cow position: chr3:66620098-66620388 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 263, 40

Conread position: 54-347
Cow position: chr3:69933316-69933610 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chr3:78027488-78027194 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 60-324
Cow position: chr3:207237-206968 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-324
Cow position: chr3:66119583-66119848 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 60-325
Cow position: chr3:472460-472726 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-342
Cow position: chr3:50127952-50127670 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 23, 208

Conread position: 60-345
Cow position: chr3:40157577-40157291 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 89

Conread position: 60-345
Cow position: chr3:45869289-45869002 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 192

Conread position: 61-308
Cow position: chr3:19878587-19878835 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 61-386
Cow position: chr3:32842504-32842195 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 125, 63

Conread position: 62-391
Cow position: chr3:19722691-19722362 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 216
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 71

Conread position: 65-341
Cow position: chr3:56396048-56396322 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 23

Conread position: 66-360
Cow position: chr3:36127325-36127621 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 292

Conread position: 66-422
Cow position: chr3:45775154-45774807 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 97

Conread position: 67-390
Cow position: chr3:54783475-54783806 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 7, 51

Conread position: 68-390
Cow position: chr3:49162633-49162953 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 11, 102

Conread position: 68-394
Cow position: chr3:42630951-42631276 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 60

Conread position: 69-323
Cow position: chr3:36864421-36864165 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 0

Conread position: 70-386
Cow position: chr3:21305243-21304925 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 136

Conread position: 72-321
Cow position: chr3:18729199-18728950 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 147, 17

Conread position: 74-383
Cow position: chr3:24642735-24643035 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 148

Conread position: 74-421
Cow position: chr3:14754354-14754008 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 74

Conread position: 76-387
Cow position: chr3:28929693-28929386 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 116, 71

Conread position: 80-361
Cow position: chr3:15178263-15178538 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 36

Conread position: 80-386
Cow position: chr3:42688546-42688852 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 204
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 117

Conread position: 83-317
Cow position: chr3:68873802-68873568 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 175

Conread position: 83-346
Cow position: chr3:82541369-82541635 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 60

Conread position: 90-247
Cow position: chr3:17776045-17776201 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 119-317
Cow position: chr3:40340124-40339925 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 122
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 192, 0

Conread position: 133-378
Cow position: chr3:26837760-26837519 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 39

Conread position: 140-282
Cow position: chr3:40997981-40998124 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 141-473
Cow position: chr3:63004723-63004402 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 62

Conread position: 148-317
Cow position: chr3:29331261-29331090 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 6, 0

Conread position: 150-421
Cow position: chr3:36098700-36098427 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 18

Conread position: 151-480
Cow position: chr3:14632678-14632353 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 153-309
Cow position: chr3:7481210-7481054 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 161-324
Cow position: chr3:53713078-53713241 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 214-318
Cow position: chr3:37969130-37969234 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 220-361
Cow position: chr3:63241688-63241547 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 220-422
Cow position: chr3:4738897-4738699 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 75

Conread position: 291-480
Cow position: chr3:66990923-66991107 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 154, 0

Conread position: 2-480
Cow position: chr4:21338332-21337858 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 72

Conread position: 3-324
Cow position: chr4:11618518-11618848 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 297

Conread position: 3-324
Cow position: chr4:26887184-26886868 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 48

Conread position: 3-325
Cow position: chr4:18424859-18424522 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-347
Cow position: chr4:33073436-33073088 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 182

Conread position: 9-293
Cow position: chr4:528679-528960 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 176
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 67, 27

Conread position: 32-390
Cow position: chr4:15193756-15194117 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 235
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 20

Conread position: 38-211
Cow position: chr4:24198505-24198329 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 42-421
Cow position: chr4:8598442-8598063 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 212

Conread position: 52-235
Cow position: chr4:29531989-29531806 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 22, 97

Conread position: 52-266
Cow position: chr4:3830205-3830415 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 13, 79

Conread position: 52-278
Cow position: chr4:39272215-39271985 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 29, 200

Conread position: 52-288
Cow position: chr4:355635-355871 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 134

Conread position: 52-288
Cow position: chr4:17926530-17926293 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr4:25599894-25599636 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr4:27333169-27333418 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 96

Conread position: 52-309
Cow position: chr4:32211892-32212150 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-309
Cow position: chr4:47717881-47717624 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 127

Conread position: 52-317
Cow position: chr4:101208-100941 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-317
Cow position: chr4:158240-158507 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr4:16056327-16056593 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 85

Conread position: 52-318
Cow position: chr4:18516621-18516887 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 144

Conread position: 52-320
Cow position: chr4:1497034-1496765 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr4:602719-602992 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 0

Conread position: 52-323
Cow position: chr4:9355046-9354772 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr4:13547754-13548028 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-323
Cow position: chr4:65223809-65223535 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr4:66179263-66178990 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-325
Cow position: chr4:1930898-1930621 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 33

Conread position: 52-325
Cow position: chr4:6268903-6268629 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 202

Conread position: 52-325
Cow position: chr4:30307734-30307456 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 52-341
Cow position: chr4:48026122-48026413 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 201

Conread position: 52-347
Cow position: chr4:12241494-12241197 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 260

Conread position: 52-359
Cow position: chr4:4176154-4176453 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 225

Conread position: 52-402
Cow position: chr4:23493463-23493794 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 23, 78

Conread position: 52-478
Cow position: chr4:60264843-60264416 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-480
Cow position: chr4:1464200-1463785 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 182

Conread position: 52-480
Cow position: chr4:28830753-28831177 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 258

Conread position: 52-480
Cow position: chr4:46663918-46664333 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 53-309
Cow position: chr4:47764445-47764188 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 147

Conread position: 53-344
Cow position: chr4:3125505-3125819 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 53-480
Cow position: chr4:34185144-34184754 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 12

Conread position: 54-271
Cow position: chr4:4905873-4906091 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-286
Cow position: chr4:3961319-3961551 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 10

Conread position: 54-304
Cow position: chr4:16359610-16359861 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 54-309
Cow position: chr4:12587025-12587281 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 54-309
Cow position: chr4:24445474-24445224 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 184

Conread position: 54-309
Cow position: chr4:36896100-36896350 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 94

Conread position: 54-309
Cow position: chr4:41331164-41331421 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr4:43880836-43881091 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 115

Conread position: 54-312
Cow position: chr4:41119740-41119999 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-338
Cow position: chr4:13492303-13492585 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 145

Conread position: 54-347
Cow position: chr4:43319909-43319626 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 80

Conread position: 55-309
Cow position: chr4:6490634-6490382 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 55

Conread position: 55-349
Cow position: chr4:33493536-33493847 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 19, 210

Conread position: 56-328
Cow position: chr4:44724812-44725084 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 255

Conread position: 57-347
Cow position: chr4:45049568-45049278 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 195

Conread position: 60-324
Cow position: chr4:61256629-61256889 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 130

Conread position: 60-347
Cow position: chr4:66925732-66926017 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 147

Conread position: 61-317
Cow position: chr4:5879900-5880157 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 65

Conread position: 68-225
Cow position: chr4:6214817-6214660 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 6, 81

Conread position: 68-321
Cow position: chr4:40824512-40824258 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 69-392
Cow position: chr4:17530685-17530366 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 170, 79

Conread position: 72-228
Cow position: chr4:496211-496056 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 120, 0

Conread position: 72-321
Cow position: chr4:62565729-62565979 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 205, 127

Conread position: 72-346
Cow position: chr4:57979374-57979647 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 175

Conread position: 72-361
Cow position: chr4:969298-969009 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 155, 98

Conread position: 72-407
Cow position: chr4:11393591-11393264 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 32

Conread position: 75-239
Cow position: chr4:27443203-27443370 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 75-330
Cow position: chr4:22471919-22472172 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 34

Conread position: 76-323
Cow position: chr4:9587013-9587262 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 0

Conread position: 85-393
Cow position: chr4:11384718-11385022 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 85

Conread position: 90-421
Cow position: chr4:21564884-21565191 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 135, 68

Conread position: 91-347
Cow position: chr4:26749116-26748879 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 99-410
Cow position: chr4:60630612-60630321 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 250, 48

Conread position: 119-356
Cow position: chr4:51044131-51043903 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 191, 17

Conread position: 128-309
Cow position: chr4:4415884-4416065 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 136-347
Cow position: chr4:31565493-31565284 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 13

Conread position: 141-324
Cow position: chr4:10408492-10408671 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 88, 40

Conread position: 165-325
Cow position: chr4:41954312-41954477 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 176-325
Cow position: chr4:18190256-18190408 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 135, 49

Conread position: 176-325
Cow position: chr4:41957979-41958132 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 135, 0

Conread position: 179-304
Cow position: chr4:31669122-31669249 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 233-388
Cow position: chr4:27443479-27443635 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 268-383
Cow position: chr4:35795586-35795702 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 285-480
Cow position: chr4:54955707-54955901 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 160
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 14, 7

Conread position: 2-324
Cow position: chr5:29009114-29009445 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 256

Conread position: 2-394
Cow position: chr5:41529817-41529428 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 39

Conread position: 2-480
Cow position: chr5:46659486-46659963 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 3-309
Cow position: chr5:32733497-32733175 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 3-344
Cow position: chr5:45700039-45700384 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 70

Conread position: 7-298
Cow position: chr5:24330050-24330340 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 64

Conread position: 7-324
Cow position: chr5:3785563-3785877 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 23, 67

Conread position: 11-318
Cow position: chr5:27909488-27909186 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 12-394
Cow position: chr5:31202853-31202464 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 259
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 5, 170

Conread position: 20-269
Cow position: chr5:5786827-5786570 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 23-288
Cow position: chr5:73489770-73489505 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 172

Conread position: 32-289
Cow position: chr5:12644136-12643885 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 38-306
Cow position: chr5:57977065-57977332 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 51-324
Cow position: chr5:49119463-49119189 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 51-414
Cow position: chr5:51319424-51319068 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 234
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 47

Conread position: 52-192
Cow position: chr5:52805186-52805326 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 22, 36

Conread position: 52-195
Cow position: chr5:18665781-18665924 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 22, 140

Conread position: 52-216
Cow position: chr5:4088624-4088789 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 52-240
Cow position: chr5:58819815-58819626 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 52-275
Cow position: chr5:1341974-1341755 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 141

Conread position: 52-288
Cow position: chr5:10918617-10918854 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-288
Cow position: chr5:31101778-31101555 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 129

Conread position: 52-309
Cow position: chr5:14379982-14380239 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 220

Conread position: 52-309
Cow position: chr5:29042331-29042588 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 110

Conread position: 52-309
Cow position: chr5:46663822-46664080 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr5:49518479-49518735 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-317
Cow position: chr5:2531090-2531357 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 111

Conread position: 52-317
Cow position: chr5:6589202-6588934 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr5:24576733-24577001 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 52-317
Cow position: chr5:34202759-34203021 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 36

Conread position: 52-317
Cow position: chr5:46775897-46776166 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr5:59060440-59060704 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 102

Conread position: 52-323
Cow position: chr5:44459302-44459576 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr5:46644506-46644780 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 52-323
Cow position: chr5:48468457-48468186 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 15

Conread position: 52-323
Cow position: chr5:59482073-59482344 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 160

Conread position: 52-324
Cow position: chr5:28007022-28007282 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 49

Conread position: 52-324
Cow position: chr5:39164979-39164708 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 52-325
Cow position: chr5:4019379-4019101 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr5:26079399-26079124 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr5:31706395-31706671 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-325
Cow position: chr5:32772301-32772579 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr5:47831285-47831016 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 42

Conread position: 52-325
Cow position: chr5:58195821-58196099 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-341
Cow position: chr5:32673924-32673633 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 276

Conread position: 52-344
Cow position: chr5:45182290-45181985 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-346
Cow position: chr5:28031296-28031591 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 291

Conread position: 52-347
Cow position: chr5:415903-415608 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-347
Cow position: chr5:3964289-3964574 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 26, 37

Conread position: 52-347
Cow position: chr5:4068809-4069102 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 144

Conread position: 52-347
Cow position: chr5:57482727-57482431 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 259

Conread position: 52-347
Cow position: chr5:64782199-64781903 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr5:10776445-10776141 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr5:54932399-54932095 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-353
Cow position: chr5:41962419-41962120 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 289

Conread position: 52-390
Cow position: chr5:14659275-14658942 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 24, 97

Conread position: 52-398
Cow position: chr5:29436150-29435790 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 207

Conread position: 52-406
Cow position: chr5:27489067-27489422 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 49

Conread position: 52-406
Cow position: chr5:52433790-52434141 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 66

Conread position: 52-408
Cow position: chr5:46630622-46630273 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 300

Conread position: 52-474
Cow position: chr5:14346561-14346139 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 276
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 22, 148

Conread position: 52-480
Cow position: chr5:49593636-49593207 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 53-230
Cow position: chr5:5317937-5317759 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 53-281
Cow position: chr5:61273361-61273138 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 53-321
Cow position: chr5:24108770-24108507 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 132

Conread position: 53-335
Cow position: chr5:27001431-27001710 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 12

Conread position: 53-395
Cow position: chr5:26068897-26068565 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 77

Conread position: 53-421
Cow position: chr5:39247562-39247221 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 77

Conread position: 54-173
Cow position: chr5:7273673-7273793 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 54-278
Cow position: chr5:6158373-6158152 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 36

Conread position: 54-295
Cow position: chr5:3504429-3504187 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 54-304
Cow position: chr5:48808894-48808643 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr5:30579143-30579399 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr5:37732167-37732423 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-343
Cow position: chr5:46738764-46738474 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 257

Conread position: 54-347
Cow position: chr5:24098470-24098764 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 257

Conread position: 54-349
Cow position: chr5:55627809-55628103 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 76

Conread position: 54-350
Cow position: chr5:2914272-2914566 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 194

Conread position: 54-353
Cow position: chr5:2430311-2430009 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 55-286
Cow position: chr5:26090009-26089778 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 193

Conread position: 60-210
Cow position: chr5:25206914-25206762 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 51

Conread position: 60-324
Cow position: chr5:9686603-9686335 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-324
Cow position: chr5:20972205-20971954 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 99

Conread position: 60-324
Cow position: chr5:41551100-41550834 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 60-324
Cow position: chr5:49182096-49182361 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 133

Conread position: 60-331
Cow position: chr5:27652159-27651883 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 60-336
Cow position: chr5:32945701-32945978 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-345
Cow position: chr5:26769638-26769921 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 139

Conread position: 61-392
Cow position: chr5:53626939-53626607 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 12, 200

Conread position: 66-395
Cow position: chr5:61020011-61019700 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 8, 96

Conread position: 66-407
Cow position: chr5:25000811-25000475 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 161

Conread position: 67-347
Cow position: chr5:33185611-33185885 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 163

Conread position: 72-235
Cow position: chr5:18653885-18654048 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 74-414
Cow position: chr5:23755779-23755453 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 216

Conread position: 75-321
Cow position: chr5:28022999-28023242 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 164, 140

Conread position: 80-414
Cow position: chr5:49129069-49129401 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 269, 93

Conread position: 81-390
Cow position: chr5:51771449-51771135 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 78, 0

Conread position: 83-278
Cow position: chr5:17774189-17773994 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 83-324
Cow position: chr5:4385108-4385338 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 84-321
Cow position: chr5:39872259-39872491 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 226, 53

Conread position: 115-399
Cow position: chr5:76123696-76123407 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 199, 68

Conread position: 119-317
Cow position: chr5:27570000-27570197 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 120-288
Cow position: chr5:34696490-34696659 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 138
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 150, 0

Conread position: 128-323
Cow position: chr5:10843523-10843326 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 183, 0

Conread position: 132-421
Cow position: chr5:23228130-23228415 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 12, 74

Conread position: 143-323
Cow position: chr5:9042949-9043131 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 168, 0

Conread position: 145-347
Cow position: chr5:54792722-54792520 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 172, 165

Conread position: 148-317
Cow position: chr5:23960399-23960229 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 163, 0

Conread position: 150-360
Cow position: chr5:18271526-18271734 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 97, 83

Conread position: 150-421
Cow position: chr5:27682826-27682549 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 87

Conread position: 157-421
Cow position: chr5:18117650-18117395 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 0

Conread position: 160-307
Cow position: chr5:25206763-25206609 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 8

Conread position: 178-421
Cow position: chr5:27059178-27058932 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 178-421
Cow position: chr5:27060081-27059835 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 191-324
Cow position: chr5:6611970-6612103 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 193-325
Cow position: chr5:18665955-18666089 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 193-480
Cow position: chr5:40053420-40053687 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 60

Conread position: 197-407
Cow position: chr5:56857757-56857545 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 198-323
Cow position: chr5:10482814-10482941 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 198-325
Cow position: chr5:18122502-18122371 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 214-317
Cow position: chr5:35299835-35299939 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 216-421
Cow position: chr5:14785819-14785607 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 175

Conread position: 219-323
Cow position: chr5:56145034-56144928 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 230-395
Cow position: chr5:7502912-7502747 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 121, 21

Conread position: 262-479
Cow position: chr5:61272828-61272620 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 59, 22

Conread position: 1-311
Cow position: chr6:13276698-13277021 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 118

Conread position: 2-217
Cow position: chr6:12092978-12092765 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 2-273
Cow position: chr6:11277794-11277513 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 128

Conread position: 2-304
Cow position: chr6:13317589-13317284 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 264

Conread position: 2-304
Cow position: chr6:66231699-66232009 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 43

Conread position: 3-309
Cow position: chr6:15141278-15140961 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-309
Cow position: chr6:15280645-15280333 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-317
Cow position: chr6:13846945-13847260 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 218

Conread position: 3-325
Cow position: chr6:44028945-44029278 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 283

Conread position: 3-341
Cow position: chr6:65841492-65841834 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 310

Conread position: 3-347
Cow position: chr6:20561212-20560855 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-347
Cow position: chr6:40554695-40554333 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 257

Conread position: 3-349
Cow position: chr6:19453820-19454175 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 180

Conread position: 9-298
Cow position: chr6:33388737-33389049 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 0

Conread position: 15-346
Cow position: chr6:6155614-6155939 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 121, 19

Conread position: 27-314
Cow position: chr6:41552947-41553234 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 125

Conread position: 28-395
Cow position: chr6:11402973-11403344 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 181

Conread position: 34-295
Cow position: chr6:17099760-17099495 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 37

Conread position: 34-395
Cow position: chr6:66539743-66540090 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 61

Conread position: 38-286
Cow position: chr6:3278001-3277754 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 13

Conread position: 39-393
Cow position: chr6:12095447-12095111 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 234
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 52-184
Cow position: chr6:65910747-65910881 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 52-246
Cow position: chr6:57870042-57869847 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 0

Conread position: 52-288
Cow position: chr6:27469213-27469446 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 83

Conread position: 52-304
Cow position: chr6:6566566-6566819 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-304
Cow position: chr6:43793809-43793540 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 24, 150

Conread position: 52-304
Cow position: chr6:47043243-47042985 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-309
Cow position: chr6:2554669-2554925 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 52-309
Cow position: chr6:13104019-13104277 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 52-309
Cow position: chr6:27530042-27529788 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 96

Conread position: 52-309
Cow position: chr6:33459825-33460082 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 33

Conread position: 52-309
Cow position: chr6:58408951-58408693 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr6:16051841-16052108 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr6:26670902-26670630 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-317
Cow position: chr6:28491552-28491286 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 52-317
Cow position: chr6:65822165-65821898 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 160

Conread position: 52-323
Cow position: chr6:7866790-7866516 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr6:28063299-28063571 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 112

Conread position: 52-324
Cow position: chr6:65880828-65881101 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr6:331507-331230 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 147

Conread position: 52-325
Cow position: chr6:7141510-7141248 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 22, 97

Conread position: 52-325
Cow position: chr6:17598318-17598040 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr6:39908490-39908766 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 52-325
Cow position: chr6:43617677-43617954 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 121

Conread position: 52-331
Cow position: chr6:701916-702193 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 202

Conread position: 52-339
Cow position: chr6:44150595-44150302 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-344
Cow position: chr6:68026753-68027052 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-346
Cow position: chr6:3148965-3149266 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-346
Cow position: chr6:30479052-30479357 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-346
Cow position: chr6:65927898-65928194 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 78

Conread position: 52-347
Cow position: chr6:36526004-36526305 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-347
Cow position: chr6:55544366-55544070 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-349
Cow position: chr6:1405277-1404973 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr6:1411979-1411675 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr6:2374661-2374965 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr6:27169538-27169846 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr6:34127314-34127618 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-373
Cow position: chr6:62397116-62397452 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 216
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 52-381
Cow position: chr6:25359467-25359800 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 21, 198

Conread position: 52-382
Cow position: chr6:7179730-7179401 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 54

Conread position: 52-389
Cow position: chr6:32330830-32330496 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 203

Conread position: 52-395
Cow position: chr6:37642362-37642687 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 230
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 119

Conread position: 52-414
Cow position: chr6:59741089-59740734 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 62

Conread position: 52-421
Cow position: chr6:35420634-35420279 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 83

Conread position: 52-480
Cow position: chr6:6476521-6476109 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 78

Conread position: 52-480
Cow position: chr6:37116101-37116524 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 78

Conread position: 52-480
Cow position: chr6:38232242-38232666 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 88

Conread position: 53-166
Cow position: chr6:42722964-42722851 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 77

Conread position: 53-407
Cow position: chr6:34203469-34203833 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 238
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 148

Conread position: 54-272
Cow position: chr6:913604-913824 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 80

Conread position: 54-288
Cow position: chr6:3889516-3889281 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr6:5951278-5951048 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 70

Conread position: 54-288
Cow position: chr6:28274946-28275180 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 54-301
Cow position: chr6:25214221-25214469 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-304
Cow position: chr6:8761341-8761091 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 142

Conread position: 54-304
Cow position: chr6:17046022-17046269 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 94

Conread position: 54-304
Cow position: chr6:64715193-64715443 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 95

Conread position: 54-309
Cow position: chr6:24239028-24239284 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr6:30275215-30274960 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 228

Conread position: 54-309
Cow position: chr6:35876755-35876499 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-331
Cow position: chr6:3488437-3488159 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 176

Conread position: 54-347
Cow position: chr6:8201695-8201994 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 262

Conread position: 54-347
Cow position: chr6:29311454-29311748 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-347
Cow position: chr6:34893047-34892749 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 261

Conread position: 57-325
Cow position: chr6:13943874-13944146 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 60-338
Cow position: chr6:40315026-40315293 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 251, 12

Conread position: 60-345
Cow position: chr6:59919309-59919025 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 102

Conread position: 62-325
Cow position: chr6:10558689-10558425 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 64-286
Cow position: chr6:33900650-33900426 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 11, 64

Conread position: 65-349
Cow position: chr6:1822645-1822383 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 67-264
Cow position: chr6:21971666-21971860 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 12, 0

Conread position: 68-403
Cow position: chr6:28474679-28475024 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 222
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 69-230
Cow position: chr6:63198097-63197936 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 72-276
Cow position: chr6:31568817-31568619 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 140

Conread position: 72-320
Cow position: chr6:526220-526464 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 162, 0

Conread position: 72-321
Cow position: chr6:35433516-35433761 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 175, 137

Conread position: 72-346
Cow position: chr6:15476258-15476543 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 91, 194

Conread position: 72-353
Cow position: chr6:28105871-28105577 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 83, 139

Conread position: 72-361
Cow position: chr6:6542933-6543224 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 149

Conread position: 72-421
Cow position: chr6:1100605-1100256 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 256

Conread position: 81-341
Cow position: chr6:34441109-34441370 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 46

Conread position: 90-309
Cow position: chr6:40251663-40251882 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 111-381
Cow position: chr6:65899881-65899603 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 108, 57

Conread position: 150-309
Cow position: chr6:65007748-65007905 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 142, 43

Conread position: 155-430
Cow position: chr6:10641225-10641500 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 67

Conread position: 168-480
Cow position: chr6:43608280-43607976 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 183-285
Cow position: chr6:9738793-9738895 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 183-407
Cow position: chr6:52805124-52805342 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 43

Conread position: 187-349
Cow position: chr6:58026855-58027014 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 189-324
Cow position: chr6:12650850-12650715 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 193-317
Cow position: chr6:52693126-52693251 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 193-323
Cow position: chr6:10499621-10499489 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 198-433
Cow position: chr6:14853365-14853142 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 53

Conread position: 214-317
Cow position: chr6:40275212-40275316 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 221-323
Cow position: chr6:24323250-24323146 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-324
Cow position: chr7:67417028-67417366 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 263

Conread position: 1-336
Cow position: chr7:68907828-68908163 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 169

Conread position: 2-166
Cow position: chr7:53990729-53990894 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 108

Conread position: 2-317
Cow position: chr7:52120093-52119767 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 2-480
Cow position: chr7:3154766-3155254 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 3-302
Cow position: chr7:1357694-1357384 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 3-309
Cow position: chr7:48633383-48633688 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 42

Conread position: 3-325
Cow position: chr7:25439506-25439839 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 21

Conread position: 3-414
Cow position: chr7:33074176-33073744 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 275
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 315

Conread position: 3-414
Cow position: chr7:63020840-63021254 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 225

Conread position: 3-421
Cow position: chr7:6489323-6488916 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 239

Conread position: 4-263
Cow position: chr7:26890798-26891070 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 4-419
Cow position: chr7:47050689-47051103 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 117

Conread position: 7-473
Cow position: chr7:39108237-39107773 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 87

Conread position: 9-317
Cow position: chr7:68479179-68479485 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 27

Conread position: 10-324
Cow position: chr7:5662374-5662697 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 33

Conread position: 11-325
Cow position: chr7:3301140-3300829 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-360
Cow position: chr7:27102100-27101756 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 35-320
Cow position: chr7:68076449-68076746 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 175

Conread position: 51-321
Cow position: chr7:25102079-25102346 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 176
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 79

Conread position: 52-249
Cow position: chr7:68084839-68085037 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 52-250
Cow position: chr7:26924986-26924789 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 23, 54

Conread position: 52-252
Cow position: chr7:26026090-26026287 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 113

Conread position: 52-257
Cow position: chr7:26893801-26894006 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 175

Conread position: 52-288
Cow position: chr7:8145193-8144956 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-288
Cow position: chr7:27786675-27786909 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 33

Conread position: 52-294
Cow position: chr7:41869895-41869652 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 230

Conread position: 52-301
Cow position: chr7:54602902-54603152 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-304
Cow position: chr7:10431367-10431114 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr7:34149143-34149402 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 52-309
Cow position: chr7:7257246-7257502 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 202

Conread position: 52-309
Cow position: chr7:14139550-14139292 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-309
Cow position: chr7:20799391-20799137 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 185

Conread position: 52-309
Cow position: chr7:21985450-21985708 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr7:34485957-34486223 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr7:67798901-67799160 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 20

Conread position: 52-323
Cow position: chr7:16821-16547 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr7:21320207-21320481 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-323
Cow position: chr7:23815919-23815645 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr7:61559264-61559536 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr7:24808416-24808141 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr7:63385390-63385664 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 163

Conread position: 52-325
Cow position: chr7:6648604-6648327 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 245

Conread position: 52-325
Cow position: chr7:11466687-11466410 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 147

Conread position: 52-331
Cow position: chr7:1449535-1449815 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 201

Conread position: 52-344
Cow position: chr7:11446606-11446906 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-345
Cow position: chr7:3234631-3234333 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 52-346
Cow position: chr7:1611160-1610865 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-349
Cow position: chr7:6642827-6642522 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr7:20528624-20528320 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr7:20555765-20556069 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-350
Cow position: chr7:21975686-21975396 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 142

Conread position: 52-361
Cow position: chr7:750971-751276 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 125

Conread position: 52-381
Cow position: chr7:67484323-67484651 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 85

Conread position: 52-395
Cow position: chr7:3730030-3730370 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 236
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 84

Conread position: 52-407
Cow position: chr7:39556044-39555689 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 82

Conread position: 52-421
Cow position: chr7:1400308-1399942 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 263

Conread position: 52-433
Cow position: chr7:35287509-35287126 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 130

Conread position: 52-480
Cow position: chr7:29370531-29370120 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 52-480
Cow position: chr7:51014005-51014416 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 120

Conread position: 52-480
Cow position: chr7:68778103-68777685 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 167

Conread position: 53-286
Cow position: chr7:33878314-33878085 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 111

Conread position: 53-383
Cow position: chr7:21310261-21310589 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 77

Conread position: 53-395
Cow position: chr7:58993251-58993585 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 77

Conread position: 53-421
Cow position: chr7:68858063-68857706 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 53

Conread position: 54-288
Cow position: chr7:39791808-39792043 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-304
Cow position: chr7:446578-446327 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-304
Cow position: chr7:21127608-21127359 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 54-304
Cow position: chr7:45949097-45948848 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 194

Conread position: 54-309
Cow position: chr7:13537530-13537275 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 174

Conread position: 54-309
Cow position: chr7:21234958-21234703 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 115

Conread position: 54-309
Cow position: chr7:33406189-33405933 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 141

Conread position: 54-309
Cow position: chr7:46902027-46901772 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 198

Conread position: 54-309
Cow position: chr7:55537864-55537609 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 210

Conread position: 54-309
Cow position: chr7:64241895-64241639 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 142

Conread position: 54-347
Cow position: chr7:1372599-1372305 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 55-324
Cow position: chr7:5183459-5183729 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 57-309
Cow position: chr7:60463205-60463458 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 58-396
Cow position: chr7:68478500-68478840 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 23, 101

Conread position: 60-241
Cow position: chr7:38536568-38536749 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 14, 146

Conread position: 60-279
Cow position: chr7:36085395-36085614 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 207

Conread position: 60-324
Cow position: chr7:35297212-35296944 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 60-324
Cow position: chr7:41490170-41490433 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 169

Conread position: 62-309
Cow position: chr7:994296-994539 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 14, 122

Conread position: 62-309
Cow position: chr7:19924761-19924518 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 23

Conread position: 66-347
Cow position: chr7:23836178-23836459 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 193

Conread position: 66-413
Cow position: chr7:52804649-52804308 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 8, 158

Conread position: 68-379
Cow position: chr7:60857150-60856851 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 44

Conread position: 68-390
Cow position: chr7:59136475-59136789 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 7, 101

Conread position: 68-407
Cow position: chr7:65339647-65339305 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 218
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 211

Conread position: 72-395
Cow position: chr7:27126235-27126552 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 210
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 277, 43

Conread position: 72-427
Cow position: chr7:68328745-68329080 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 235
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 57

Conread position: 75-400
Cow position: chr7:27540286-27539965 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 75-480
Cow position: chr7:29470198-29470597 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 76-298
Cow position: chr7:62679594-62679375 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 178, 0

Conread position: 80-323
Cow position: chr7:43830945-43830700 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 0

Conread position: 80-408
Cow position: chr7:63550610-63550294 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 90

Conread position: 84-349
Cow position: chr7:20515688-20515417 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 227, 0

Conread position: 85-392
Cow position: chr7:58378125-58377823 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 106, 110

Conread position: 89-345
Cow position: chr7:68232029-68232288 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 92-480
Cow position: chr7:24934874-24934491 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 93

Conread position: 96-414
Cow position: chr7:55280706-55280390 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 38

Conread position: 104-395
Cow position: chr7:49290764-49291057 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 117-321
Cow position: chr7:41487671-41487878 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 30

Conread position: 139-390
Cow position: chr7:20820423-20820671 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 209, 22

Conread position: 141-407
Cow position: chr7:40270396-40270134 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 93, 52

Conread position: 150-478
Cow position: chr7:53990902-53991222 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 217

Conread position: 171-324
Cow position: chr7:21929315-21929466 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 172-309
Cow position: chr7:27147423-27147558 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 116
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 181-412
Cow position: chr7:54196076-54195839 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 193-395
Cow position: chr7:68557433-68557635 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 34

Conread position: 196-389
Cow position: chr7:1735330-1735130 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 315-478
Cow position: chr7:48633725-48633884 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 92

Conread position: 2-298
Cow position: chr8:42759137-42759429 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 34

Conread position: 2-317
Cow position: chr8:44036604-44036273 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 162

Conread position: 2-334
Cow position: chr8:45189269-45189605 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 127

Conread position: 2-480
Cow position: chr8:11970397-11969935 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 40

Conread position: 3-320
Cow position: chr8:50934291-50934608 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 31

Conread position: 3-323
Cow position: chr8:9275194-9275521 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 113

Conread position: 3-346
Cow position: chr8:47670630-47670984 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 264

Conread position: 3-347
Cow position: chr8:42484103-42484446 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 68

Conread position: 3-480
Cow position: chr8:33430107-33430587 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 317

Conread position: 3-480
Cow position: chr8:61035191-61034684 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 7-323
Cow position: chr8:11761466-11761789 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 38

Conread position: 11-282
Cow position: chr8:8910421-8910690 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 15-475
Cow position: chr8:45161180-45160714 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 383

Conread position: 36-324
Cow position: chr8:23216979-23217271 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 36-398
Cow position: chr8:42467549-42467906 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 15

Conread position: 38-414
Cow position: chr8:45693400-45693024 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 13

Conread position: 51-304
Cow position: chr8:14591674-14591411 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-217
Cow position: chr8:53427559-53427725 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 22, 0

Conread position: 52-223
Cow position: chr8:13735883-13736055 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 23, 55

Conread position: 52-265
Cow position: chr8:46091623-46091417 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 63, 0

Conread position: 52-274
Cow position: chr8:11801468-11801695 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 23, 148

Conread position: 52-284
Cow position: chr8:61067006-61066775 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 99

Conread position: 52-288
Cow position: chr8:9540255-9540021 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 145

Conread position: 52-288
Cow position: chr8:27983557-27983322 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 196

Conread position: 52-303
Cow position: chr8:39195977-39195727 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 54

Conread position: 52-304
Cow position: chr8:2171141-2170888 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr8:8229543-8229290 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr8:38390606-38390859 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-308
Cow position: chr8:11774152-11774405 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 106, 9

Conread position: 52-309
Cow position: chr8:8556910-8556652 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 52-309
Cow position: chr8:11831936-11832196 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 146

Conread position: 52-309
Cow position: chr8:19329974-19330232 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr8:47069568-47069309 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-309
Cow position: chr8:50288913-50288655 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr8:50994026-50994284 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr8:1154069-1153802 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr8:6065530-6065263 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr8:10748613-10748880 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr8:11821551-11821817 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 224

Conread position: 52-317
Cow position: chr8:27578646-27578907 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 38

Conread position: 52-317
Cow position: chr8:32631787-32631522 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 52-318
Cow position: chr8:25776435-25776169 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-319
Cow position: chr8:21158578-21158312 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 66

Conread position: 52-323
Cow position: chr8:1349007-1348723 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 0

Conread position: 52-324
Cow position: chr8:27925555-27925826 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 52-324
Cow position: chr8:32930749-32931021 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 78

Conread position: 52-324
Cow position: chr8:46944680-46944408 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 52-325
Cow position: chr8:26005360-26005080 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 148

Conread position: 52-344
Cow position: chr8:9735485-9735784 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 52-344
Cow position: chr8:22572056-22571758 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 20

Conread position: 52-345
Cow position: chr8:47074508-47074802 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-346
Cow position: chr8:45316887-45316591 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-347
Cow position: chr8:10743392-10743097 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 33

Conread position: 52-359
Cow position: chr8:1319283-1319599 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-392
Cow position: chr8:13808834-13809181 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 188

Conread position: 52-393
Cow position: chr8:11056102-11056448 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 227
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 23, 40

Conread position: 52-413
Cow position: chr8:23766160-23765806 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 113

Conread position: 52-421
Cow position: chr8:25542740-25543110 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 215

Conread position: 52-422
Cow position: chr8:46222094-46221726 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 207

Conread position: 52-472
Cow position: chr8:42161488-42161078 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 82

Conread position: 52-480
Cow position: chr8:24420291-24419876 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 52-480
Cow position: chr8:38607286-38606860 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 162

Conread position: 52-480
Cow position: chr8:44693528-44693949 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 45

Conread position: 53-235
Cow position: chr8:8316398-8316220 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 149
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 21, 77

Conread position: 53-325
Cow position: chr8:8518342-8518067 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 54-250
Cow position: chr8:25407685-25407882 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 20, 0

Conread position: 54-250
Cow position: chr8:36637417-36637221 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 123

Conread position: 54-286
Cow position: chr8:14928753-14928520 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr8:25522641-25522876 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 54-288
Cow position: chr8:60060622-60060854 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 199

Conread position: 54-304
Cow position: chr8:5016421-5016672 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-304
Cow position: chr8:24916097-24915846 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr8:3856774-3856520 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 228

Conread position: 54-309
Cow position: chr8:33588619-33588870 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 81

Conread position: 54-309
Cow position: chr8:36636302-36636048 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 123

Conread position: 54-309
Cow position: chr8:47662086-47661829 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr8:49214667-49214923 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-328
Cow position: chr8:17311257-17311533 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 254

Conread position: 54-331
Cow position: chr8:19050716-19050996 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 234

Conread position: 54-338
Cow position: chr8:4686633-4686917 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chr8:3784950-3785244 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chr8:12449188-12449481 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chr8:23770875-23771169 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 253

Conread position: 54-347
Cow position: chr8:32319309-32319015 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chr8:44244334-44244040 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 258

Conread position: 54-347
Cow position: chr8:59262653-59262360 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 58-346
Cow position: chr8:45448692-45448990 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 114

Conread position: 60-322
Cow position: chr8:44665609-44665350 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 62

Conread position: 60-421
Cow position: chr8:12543794-12543446 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 25

Conread position: 61-288
Cow position: chr8:47885281-47885504 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 13, 153

Conread position: 61-325
Cow position: chr8:2885998-2886267 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 61-404
Cow position: chr8:8533376-8533032 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 19

Conread position: 62-323
Cow position: chr8:8655971-8655706 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 66-224
Cow position: chr8:9135648-9135490 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 65

Conread position: 66-360
Cow position: chr8:15687905-15687614 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 141, 186

Conread position: 66-406
Cow position: chr8:47491580-47491237 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 163

Conread position: 69-378
Cow position: chr8:20276679-20276983 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 6, 49

Conread position: 72-383
Cow position: chr8:46633136-46632830 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 159, 118

Conread position: 75-316
Cow position: chr8:51327832-51328078 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 164, 148

Conread position: 76-224
Cow position: chr8:24876450-24876302 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 108-345
Cow position: chr8:51668002-51667763 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 109-323
Cow position: chr8:34347975-34348190 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 202, 89

Conread position: 145-480
Cow position: chr8:16083660-16084010 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 86

Conread position: 150-324
Cow position: chr8:30488166-30487992 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 20, 89

Conread position: 154-324
Cow position: chr8:46600635-46600805 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 155-421
Cow position: chr8:47672813-47673079 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 166-475
Cow position: chr8:58187147-58186864 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 5, 88

Conread position: 168-309
Cow position: chr8:42420210-42420068 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 102, 0

Conread position: 172-323
Cow position: chr8:45797956-45797803 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 139, 0

Conread position: 178-480
Cow position: chr8:44076522-44076236 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 137

Conread position: 180-288
Cow position: chr8:7160871-7160979 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 204-286
Cow position: chr8:50922943-50923025 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 73
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 219-323
Cow position: chr8:6683853-6683959 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 224-325
Cow position: chr8:32437669-32437564 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 366-480
Cow position: chr8:1117448-1117562 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 61

Conread position: 2-321
Cow position: chr9:15072342-15072674 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 183

Conread position: 2-347
Cow position: chr9:3155858-3156207 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 198

Conread position: 2-474
Cow position: chr9:13477382-13476911 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 171

Conread position: 3-304
Cow position: chr9:47002029-47002332 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 125

Conread position: 3-323
Cow position: chr9:31020635-31020984 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 0

Conread position: 3-324
Cow position: chr9:8969099-8968794 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 86

Conread position: 3-347
Cow position: chr9:10315195-10315554 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 249

Conread position: 4-259
Cow position: chr9:222721-222449 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 212

Conread position: 7-303
Cow position: chr9:37971376-37971068 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 27-419
Cow position: chr9:6111124-6110738 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 24

Conread position: 38-395
Cow position: chr9:1635430-1635776 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 95

Conread position: 52-166
Cow position: chr9:2064786-2064671 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 52-216
Cow position: chr9:46625909-46625744 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 52-240
Cow position: chr9:34719860-34720052 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 155
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 23, 143

Conread position: 52-253
Cow position: chr9:4672498-4672699 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 22, 181

Conread position: 52-264
Cow position: chr9:28021439-28021654 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 0

Conread position: 52-269
Cow position: chr9:1252079-1251867 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 52-286
Cow position: chr9:52570545-52570775 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 60

Conread position: 52-294
Cow position: chr9:37162917-37162673 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-304
Cow position: chr9:3548281-3548030 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 132

Conread position: 52-304
Cow position: chr9:3566963-3566709 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr9:1996022-1995766 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-309
Cow position: chr9:5003891-5004147 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 52-309
Cow position: chr9:10321700-10321956 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 46

Conread position: 52-309
Cow position: chr9:16268262-16268520 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr9:59174268-59174012 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 63

Conread position: 52-309
Cow position: chr9:59482782-59482524 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 52-317
Cow position: chr9:780914-780647 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-317
Cow position: chr9:1076308-1076040 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr9:2185851-2186123 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 202

Conread position: 52-317
Cow position: chr9:3006355-3006088 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr9:27933985-27934246 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 96

Conread position: 52-317
Cow position: chr9:30826572-30826839 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr9:31194276-31194009 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr9:163613-163339 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr9:1979869-1980141 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr9:3542697-3542969 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr9:9012995-9013270 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr9:2170949-2171220 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 142

Conread position: 52-324
Cow position: chr9:25483764-25484038 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 172

Conread position: 52-324
Cow position: chr9:45873239-45873514 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chr9:59443740-59444013 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 176

Conread position: 52-325
Cow position: chr9:17064507-17064215 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 144

Conread position: 52-326
Cow position: chr9:131306-131020 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 146

Conread position: 52-327
Cow position: chr9:50789568-50789845 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-328
Cow position: chr9:36724393-36724671 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 113

Conread position: 52-331
Cow position: chr9:2500404-2500124 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-345
Cow position: chr9:28626149-28625857 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 52-347
Cow position: chr9:9055175-9054877 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-347
Cow position: chr9:30672258-30672552 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-347
Cow position: chr9:59535984-59536280 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 260

Conread position: 52-352
Cow position: chr9:18836900-18837201 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 67

Conread position: 52-359
Cow position: chr9:28677866-28678180 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 52-361
Cow position: chr9:25755333-25755014 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-392
Cow position: chr9:35657842-35658174 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 63

Conread position: 52-414
Cow position: chr9:6974018-6974380 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 55

Conread position: 52-414
Cow position: chr9:39992809-39993166 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 202

Conread position: 53-160
Cow position: chr9:831542-831435 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 96

Conread position: 53-279
Cow position: chr9:4984659-4984885 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 116

Conread position: 53-323
Cow position: chr9:40191785-40191512 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-347
Cow position: chr9:37129646-37129358 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 140

Conread position: 53-394
Cow position: chr9:3356102-3355759 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 118

Conread position: 53-414
Cow position: chr9:2001517-2001183 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 7

Conread position: 53-421
Cow position: chr9:64118716-64119075 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 202

Conread position: 54-235
Cow position: chr9:29028336-29028151 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 54-288
Cow position: chr9:25023409-25023174 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chr9:27034593-27034827 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 185

Conread position: 54-303
Cow position: chr9:42309575-42309825 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr9:4532383-4532639 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 54-309
Cow position: chr9:6051157-6050900 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 142

Conread position: 54-309
Cow position: chr9:7062200-7061944 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr9:16175660-16175915 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 90

Conread position: 54-309
Cow position: chr9:31807426-31807681 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 199

Conread position: 54-309
Cow position: chr9:42568764-42569019 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 247

Conread position: 54-309
Cow position: chr9:60278129-60277874 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 118

Conread position: 54-325
Cow position: chr9:51182302-51182030 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-347
Cow position: chr9:29628854-29628561 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 188

Conread position: 56-309
Cow position: chr9:32968862-32969115 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 182

Conread position: 56-324
Cow position: chr9:59455705-59455435 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 60-297
Cow position: chr9:792615-792377 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 15, 129

Conread position: 60-322
Cow position: chr9:3586267-3586530 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 43

Conread position: 60-322
Cow position: chr9:34992291-34992554 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-324
Cow position: chr9:37063898-37063640 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 130

Conread position: 61-344
Cow position: chr9:34242696-34242410 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 111

Conread position: 62-421
Cow position: chr9:26710581-26710232 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 21, 66

Conread position: 64-280
Cow position: chr9:18067315-18067100 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 69-361
Cow position: chr9:64159023-64159318 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 89, 154

Conread position: 70-318
Cow position: chr9:54361344-54361588 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 130

Conread position: 72-278
Cow position: chr9:4280368-4280573 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 92, 102

Conread position: 72-331
Cow position: chr9:12845640-12845381 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 102, 64

Conread position: 72-346
Cow position: chr9:5424273-5423999 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 7

Conread position: 72-361
Cow position: chr9:59510704-59510990 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 185
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 140, 151

Conread position: 72-382
Cow position: chr9:6757484-6757784 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 91

Conread position: 74-323
Cow position: chr9:64018545-64018297 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 74-399
Cow position: chr9:9330813-9330485 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 208
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 89, 127

Conread position: 79-420
Cow position: chr9:37095113-37095449 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 60, 55

Conread position: 80-356
Cow position: chr9:15683855-15684119 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 80, 39

Conread position: 83-321
Cow position: chr9:3726200-3726441 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 101

Conread position: 116-309
Cow position: chr9:22653521-22653714 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 116-480
Cow position: chr9:44817814-44818179 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 0

Conread position: 119-323
Cow position: chr9:49177869-49177663 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 192, 0

Conread position: 125-414
Cow position: chr9:20309567-20309282 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 134-323
Cow position: chr9:31064406-31064597 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 177, 0

Conread position: 141-345
Cow position: chr9:6830520-6830325 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 176, 111

Conread position: 150-308
Cow position: chr9:2488142-2487983 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 150-392
Cow position: chr9:3937832-3937591 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 207, 77

Conread position: 156-347
Cow position: chr9:18509808-18509617 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 161, 154

Conread position: 157-317
Cow position: chr9:60651717-60651555 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 159-288
Cow position: chr9:7002519-7002648 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 184-390
Cow position: chr9:13537584-13537793 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 101, 92

Conread position: 186-399
Cow position: chr9:3803067-3803280 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 234-414
Cow position: chr9:13222406-13222581 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 117, 82

Conread position: 275-479
Cow position: chr9:44794577-44794777 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 36

Conread position: 285-442
Cow position: chr9:34720761-34720913 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 1-373
Cow position: chrX:41907544-41907170 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 233
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 11

Conread position: 2-197
Cow position: chrX:21586898-21587108 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 2-347
Cow position: chrX:6275862-6275524 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 29, 67

Conread position: 3-211
Cow position: chrX:19185224-19185012 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 33, 45

Conread position: 3-317
Cow position: chrX:12280523-12280207 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 214

Conread position: 3-322
Cow position: chrX:22778044-22778380 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 3-324
Cow position: chrX:21632851-21632518 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 3-324
Cow position: chrX:29285166-29285485 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 87

Conread position: 3-344
Cow position: chrX:28758895-28758546 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-347
Cow position: chrX:20803858-20804220 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 357

Conread position: 3-421
Cow position: chrX:28549621-28550031 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 40

Conread position: 4-324
Cow position: chrX:35017547-35017878 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 126

Conread position: 4-370
Cow position: chrX:6909596-6909229 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 28, 178

Conread position: 11-280
Cow position: chrX:2860042-2859776 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-280
Cow position: chrX:26400708-26400444 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-310
Cow position: chrX:15179671-15179376 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 25

Conread position: 11-317
Cow position: chrX:26504942-26505247 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 115

Conread position: 11-318
Cow position: chrX:6873312-6873010 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 25

Conread position: 11-322
Cow position: chrX:9125118-9125426 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-324
Cow position: chrX:1833587-1833900 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 25

Conread position: 11-344
Cow position: chrX:2101618-2101954 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 21

Conread position: 11-359
Cow position: chrX:24089161-24089514 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 25

Conread position: 14-324
Cow position: chrX:21602626-21602948 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 15-309
Cow position: chrX:26758847-26758551 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 22-480
Cow position: chrX:31724793-31725251 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 30

Conread position: 44-347
Cow position: chrX:22514370-22514065 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 194
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 112

Conread position: 44-395
Cow position: chrX:24139233-24138886 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 24

Conread position: 46-323
Cow position: chrX:7029980-7030257 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 14

Conread position: 51-228
Cow position: chrX:11668644-11668469 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 147
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 16, 0

Conread position: 52-198
Cow position: chrX:8479497-8479644 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 52-217
Cow position: chrX:16237105-16237271 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 137
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 23, 0

Conread position: 52-233
Cow position: chrX:5336672-5336491 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 97

Conread position: 52-234
Cow position: chrX:12289145-12288957 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 52-252
Cow position: chrX:21490027-21490226 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 78

Conread position: 52-273
Cow position: chrX:21794893-21795113 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 66

Conread position: 52-274
Cow position: chrX:38576027-38575800 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 65

Conread position: 52-286
Cow position: chrX:320265-320499 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 52-286
Cow position: chrX:29882434-29882199 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 21

Conread position: 52-288
Cow position: chrX:11663709-11663472 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-288
Cow position: chrX:15598726-15598963 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-298
Cow position: chrX:12478514-12478763 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 32, 174

Conread position: 52-301
Cow position: chrX:13413319-13413071 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 0

Conread position: 52-308
Cow position: chrX:12804068-12803811 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-308
Cow position: chrX:20316259-20316002 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chrX:982434-982692 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chrX:13398320-13398066 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-309
Cow position: chrX:24275469-24275724 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 52-309
Cow position: chrX:26767402-26767144 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 52-309
Cow position: chrX:27989988-27989727 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 192

Conread position: 52-309
Cow position: chrX:30179197-30178941 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 43

Conread position: 52-310
Cow position: chrX:7751695-7751955 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-317
Cow position: chrX:1943248-1942981 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-317
Cow position: chrX:2563061-2562794 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chrX:5863194-5863461 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chrX:7093394-7093661 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chrX:9008138-9008401 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 18

Conread position: 52-317
Cow position: chrX:11465205-11464939 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 32

Conread position: 52-317
Cow position: chrX:13076901-13076634 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chrX:13097475-13097208 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chrX:14787076-14786809 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chrX:16461473-16461733 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 198

Conread position: 52-317
Cow position: chrX:17478728-17478459 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 52-317
Cow position: chrX:18219193-18219460 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chrX:21340196-21340467 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-317
Cow position: chrX:27426520-27426257 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 186

Conread position: 52-317
Cow position: chrX:35529656-35529925 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chrX:39564135-39563868 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-318
Cow position: chrX:22582904-22582636 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-320
Cow position: chrX:29998589-29998852 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 139, 96

Conread position: 52-323
Cow position: chrX:5283938-5283666 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 97

Conread position: 52-323
Cow position: chrX:6015664-6015394 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 25, 46

Conread position: 52-323
Cow position: chrX:8454548-8454822 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chrX:9192848-9192574 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chrX:16363328-16363054 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chrX:18659986-18659713 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 151

Conread position: 52-323
Cow position: chrX:21304730-21304456 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chrX:23046942-23047212 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 202

Conread position: 52-323
Cow position: chrX:39521703-39521977 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chrX:41411225-41410951 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-324
Cow position: chrX:5299423-5299154 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 64

Conread position: 52-324
Cow position: chrX:12670069-12669795 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-324
Cow position: chrX:23019120-23019393 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 218

Conread position: 52-324
Cow position: chrX:24122122-24121851 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 52-324
Cow position: chrX:27494504-27494779 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-324
Cow position: chrX:29794318-29794047 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 88

Conread position: 52-325
Cow position: chrX:2603845-2604122 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 117

Conread position: 52-325
Cow position: chrX:5323927-5323649 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chrX:22525808-22525530 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chrX:28562418-28562140 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 52-325
Cow position: chrX:28634620-28634342 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chrX:29947503-29947781 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chrX:37811958-37812236 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 52-327
Cow position: chrX:30173871-30173595 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 37

Conread position: 52-328
Cow position: chrX:7481399-7481678 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-328
Cow position: chrX:8670388-8670666 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 239

Conread position: 52-331
Cow position: chrX:1546731-1547013 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-344
Cow position: chrX:16275473-16275772 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 131

Conread position: 52-344
Cow position: chrX:29872763-29872475 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 164

Conread position: 52-344
Cow position: chrX:31187449-31187151 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 52-345
Cow position: chrX:22619513-22619213 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-346
Cow position: chrX:35390297-35390012 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 122, 0

Conread position: 52-347
Cow position: chrX:23041327-23041031 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-347
Cow position: chrX:30711149-30711441 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 201

Conread position: 52-349
Cow position: chrX:12654959-12654660 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 126

Conread position: 52-349
Cow position: chrX:28584776-28585080 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 111

Conread position: 52-351
Cow position: chrX:8586890-8587194 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-353
Cow position: chrX:5840129-5840430 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 117

Conread position: 52-353
Cow position: chrX:22814178-22814482 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 52-353
Cow position: chrX:34988694-34988995 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 33, 63

Conread position: 52-361
Cow position: chrX:28875627-28875322 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 22, 175

Conread position: 52-364
Cow position: chrX:37848810-37849133 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-394
Cow position: chrX:29757956-29758292 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 22, 67

Conread position: 52-414
Cow position: chrX:18532793-18533148 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 54

Conread position: 52-419
Cow position: chrX:21270398-21270037 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 31

Conread position: 52-421
Cow position: chrX:12973433-12973065 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 201

Conread position: 52-421
Cow position: chrX:30369219-30368850 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 52-421
Cow position: chrX:40247518-40247157 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 175

Conread position: 52-444
Cow position: chrX:44386268-44386659 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 243

Conread position: 52-480
Cow position: chrX:2536975-2536578 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 83

Conread position: 52-480
Cow position: chrX:30142596-30142181 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 28

Conread position: 53-280
Cow position: chrX:5395165-5394937 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-293
Cow position: chrX:3085104-3084865 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 21, 84

Conread position: 53-304
Cow position: chrX:23391802-23391550 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-309
Cow position: chrX:30232311-30232054 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-317
Cow position: chrX:10531761-10531495 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 53-324
Cow position: chrX:26628235-26627963 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 53-372
Cow position: chrX:29950776-29950465 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 64

Conread position: 53-406
Cow position: chrX:20698488-20698148 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 62

Conread position: 53-480
Cow position: chrX:6283295-6282855 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 89

Conread position: 53-480
Cow position: chrX:16017344-16016900 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 19

Conread position: 54-281
Cow position: chrX:32095168-32094937 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chrX:21829322-21829557 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 54-288
Cow position: chrX:26527774-26528009 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-288
Cow position: chrX:30184096-30183861 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 54-305
Cow position: chrX:15127443-15127192 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 89

Conread position: 54-309
Cow position: chrX:2482840-2482584 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chrX:21222726-21222982 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chrX:22487979-22488235 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chrX:23455780-23455524 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chrX:38146103-38146359 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-324
Cow position: chrX:970564-970836 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 54-347
Cow position: chrX:16699098-16699392 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 257

Conread position: 54-347
Cow position: chrX:18954724-18954433 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 174

Conread position: 54-347
Cow position: chrX:32467050-32467343 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 257

Conread position: 55-286
Cow position: chrX:29853767-29853535 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 58-324
Cow position: chrX:24484610-24484344 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 169

Conread position: 58-324
Cow position: chrX:30056446-30056714 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 7

Conread position: 60-283
Cow position: chrX:5834160-5833936 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 60-308
Cow position: chrX:28603654-28603406 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 244

Conread position: 60-324
Cow position: chrX:13006821-13006556 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 60-324
Cow position: chrX:21289687-21289422 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 60-324
Cow position: chrX:24136595-24136336 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 150

Conread position: 60-353
Cow position: chrX:40057260-40056963 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 60-416
Cow position: chrX:17668486-17668142 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 124

Conread position: 63-270
Cow position: chrX:2787425-2787215 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 195

Conread position: 64-255
Cow position: chrX:17250524-17250331 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 65-324
Cow position: chrX:39719246-39719509 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 160

Conread position: 66-274
Cow position: chrX:22893558-22893350 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 137

Conread position: 66-321
Cow position: chrX:20796415-20796678 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 8, 242

Conread position: 68-223
Cow position: chrX:2380584-2380739 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 65

Conread position: 72-230
Cow position: chrX:26428230-26428070 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 72-252
Cow position: chrX:29813522-29813702 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 123

Conread position: 72-343
Cow position: chrX:19928111-19928375 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 111

Conread position: 72-406
Cow position: chrX:2143099-2143432 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 45

Conread position: 72-421
Cow position: chrX:24114370-24114021 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 228
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 289, 262

Conread position: 72-448
Cow position: chrX:29930931-29930572 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 246
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 275, 62

Conread position: 75-275
Cow position: chrX:13085315-13085119 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 79-331
Cow position: chrX:3398022-3397771 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 161, 50

Conread position: 80-324
Cow position: chrX:30044320-30044076 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 83-317
Cow position: chrX:31493252-31493483 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 26

Conread position: 85-321
Cow position: chrX:10418120-10417891 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 162, 20

Conread position: 86-317
Cow position: chrX:12353070-12353303 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 90-305
Cow position: chrX:47457863-47457647 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 68, 102

Conread position: 94-317
Cow position: chrX:17050932-17051158 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 101-297
Cow position: chrX:12997736-12997537 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 64, 141

Conread position: 106-444
Cow position: chrX:35021115-35021453 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 49

Conread position: 111-298
Cow position: chrX:14594618-14594798 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 120-414
Cow position: chrX:13052497-13052785 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 72

Conread position: 121-318
Cow position: chrX:16812727-16812531 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 189, 130

Conread position: 125-303
Cow position: chrX:23276892-23277070 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 67, 74

Conread position: 136-421
Cow position: chrX:22130799-22130511 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 112, 162

Conread position: 138-323
Cow position: chrX:11433584-11433771 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 173, 0

Conread position: 140-324
Cow position: chrX:37142705-37142521 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 143-282
Cow position: chrX:3421574-3421435 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 137, 103

Conread position: 144-328
Cow position: chrX:29096092-29096273 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 148-325
Cow position: chrX:30010931-30011112 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 6, 0

Conread position: 150-309
Cow position: chrX:20360156-20359997 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 133
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 164-323
Cow position: chrX:30055828-30055666 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 134
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 6, 0

Conread position: 171-309
Cow position: chrX:41851483-41851345 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 177-324
Cow position: chrX:4795811-4795960 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 180-324
Cow position: chrX:30990016-30990162 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 184-480
Cow position: chrX:21587120-21587421 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 203-359
Cow position: chrX:3376160-3375999 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 108, 154

Conread position: 214-317
Cow position: chrX:12342915-12343019 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 215-375
Cow position: chrX:31081462-31081620 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 148, 7