Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010009D12.5 |
| Conread position: | 59-1104 |
| Cow position: | chr10:46593798-46592756 (view UCSC Genome Browser custom track) |
| Alignm length: | 1048 |
| Alignm identity: | 787 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 115 |
| Conread position: | 371-1104 |
| Cow position: | chr11:85446426-85445693 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 442 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 163, 177 |
| Conread position: | 349-1104 |
| Cow position: | chr13:37744731-37743976 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 462 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 89, 83 |
| Conread position: | 473-1101 |
| Cow position: | chr16:19694549-19695146 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 504, 41 |
| Conread position: | 73-303 |
| Cow position: | chr17:45720976-45721205 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 121, 100 |
| Conread position: | 73-303 |
| Cow position: | chr17:45743201-45742972 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 100 |
| Conread position: | 296-445 |
| Cow position: | chr17:45721677-45721826 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 335-445 |
| Cow position: | chr17:45756647-45756539 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 455-818 |
| Cow position: | chr17:45756441-45756078 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 455-1104 |
| Cow position: | chr17:45721924-45722573 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 349-1104 |
| Cow position: | chr18:15605530-15606285 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 455 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 14, 10 |
| Conread position: | 73-301 |
| Cow position: | chr2:65193177-65192949 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 121, 100 |
| Conread position: | 73-301 |
| Cow position: | chr2:65209447-65209675 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 121, 100 |
| Conread position: | 296-445 |
| Cow position: | chr2:65192641-65192492 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 296-445 |
| Cow position: | chr2:65209977-65210126 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 128 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 455-584 |
| Cow position: | chr2:65192238-65192109 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 455-1104 |
| Cow position: | chr2:65210878-65211527 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 976-1104 |
| Cow position: | chr2:65192058-65191930 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-1104 |
| Cow position: | chr21:17711514-17712518 (view UCSC Genome Browser custom track) |
| Alignm length: | 1007 |
| Alignm identity: | 793 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 73 |
| Conread position: | 344-1033 |
| Cow position: | chr23:20802293-20801604 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 419 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 205, 190 |
| Conread position: | 358-1104 |
| Cow position: | chr23:31822142-31821394 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 451 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 5, 183 |
| Conread position: | 358-1104 |
| Cow position: | chr23:31858000-31857253 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 446 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 5, 184 |
| Conread position: | 345-1104 |
| Cow position: | chr24:29219740-29218981 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 465 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 189, 196 |
| Conread position: | 66-729 |
| Cow position: | chr5:17899880-17899217 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 108 |
| Conread position: | 73-301 |
| Cow position: | chr5:22299571-22299799 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 121, 100 |
| Conread position: | 73-301 |
| Cow position: | chr5:22341745-22341973 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 121, 100 |
| Conread position: | 73-316 |
| Cow position: | chr5:22167233-22166990 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 121, 100 |
| Conread position: | 73-316 |
| Cow position: | chr5:22179216-22178973 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 121, 100 |
| Conread position: | 73-320 |
| Cow position: | chr5:67437375-67437128 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-445 |
| Cow position: | chr5:67435685-67435533 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 296-445 |
| Cow position: | chr5:22166868-22166719 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 296-445 |
| Cow position: | chr5:22178851-22178702 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 296-445 |
| Cow position: | chr5:22299937-22300086 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 296-445 |
| Cow position: | chr5:22342111-22342260 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 296-445 |
| Cow position: | chr5:24450359-24450508 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 445-1104 |
| Cow position: | chr5:67434082-67433423 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 612 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 455-1104 |
| Cow position: | chr5:22164628-22163979 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 455-1104 |
| Cow position: | chr5:22342632-22343281 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 455-1104 |
| Cow position: | chr5:24452602-24453251 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-1104 |
| Cow position: | chr7:293001-291976 (view UCSC Genome Browser custom track) |
| Alignm length: | 1048 |
| Alignm identity: | 785 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 819, 108 |
| Conread position: | 365-1104 |
| Cow position: | chr7:13895723-13896462 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 434 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 169, 176 |