Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010059C12.5 |
| Conread position: | 69-303 |
| Cow position: | chr15:19143609-19143375 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 94, 88 |
| Conread position: | 41-283 |
| Cow position: | chr18:56272311-56272069 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 62-313 |
| Cow position: | chr18:56398592-56398341 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 235, 223 |
| Conread position: | 74-283 |
| Cow position: | chr18:56413621-56413830 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 89-283 |
| Cow position: | chr18:55576872-55576678 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 154, 166 |
| Conread position: | 63-269 |
| Cow position: | chr19:23640007-23640213 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 65-298 |
| Cow position: | chr19:14951278-14951047 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 220, 0 |
| Conread position: | 69-236 |
| Cow position: | chr2:84896556-84896389 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-306 |
| Cow position: | chr21:34231113-34230863 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 47-298 |
| Cow position: | chr22:12485096-12484845 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 238 |
| Conread position: | 61-309 |
| Cow position: | chr22:12443167-12442919 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-312 |
| Cow position: | chr22:12537818-12538065 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-299 |
| Cow position: | chr23:25617617-25617860 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 60-323 |
| Cow position: | chr23:24622923-24623186 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 62-315 |
| Cow position: | chr23:24648197-24648449 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 247, 0 |
| Conread position: | 64-270 |
| Cow position: | chr23:25658249-25658455 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-257 |
| Cow position: | chr23:24630224-24630409 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 175, 87 |
| Conread position: | 65-267 |
| Cow position: | chr23:24538680-24538478 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-270 |
| Cow position: | chr23:24527358-24527155 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 31, 107 |
| Conread position: | 65-270 |
| Cow position: | chr23:25703102-25702897 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 69-270 |
| Cow position: | chr23:25691561-25691360 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-310 |
| Cow position: | chr23:25730678-25730442 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-267 |
| Cow position: | chr23:24568042-24567870 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 47-297 |
| Cow position: | chr24:17081833-17081583 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-270 |
| Cow position: | chr24:17010432-17010637 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-270 |
| Cow position: | chr24:17062933-17063138 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-272 |
| Cow position: | chr24:16984942-16985101 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 4-323 |
| Cow position: | chr25:34751225-34751544 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-296 |
| Cow position: | chr25:3673370-3673645 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 31-282 |
| Cow position: | chr25:339474-339725 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 79, 96 |
| Conread position: | 32-229 |
| Cow position: | chr25:361375-361572 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 80, 84 |
| Conread position: | 32-300 |
| Cow position: | chr25:421930-422198 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-269 |
| Cow position: | chr25:3639867-3639642 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 204, 216 |
| Conread position: | 44-303 |
| Cow position: | chr25:4663668-4663409 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-303 |
| Cow position: | chr25:34467683-34467943 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 252, 241 |
| Conread position: | 47-323 |
| Cow position: | chr25:33142818-33143092 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 65-270 |
| Cow position: | chr25:321872-322077 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-282 |
| Cow position: | chr25:34745081-34744864 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-283 |
| Cow position: | chr25:33122315-33122533 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 65-309 |
| Cow position: | chr25:22223946-22224190 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-454 |
| Cow position: | chr25:34758982-34759116 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 447-726 |
| Cow position: | chr25:34762371-34762647 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 226, 131 |
| Conread position: | 42-313 |
| Cow position: | chr7:27245092-27244822 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 266, 0 |
| Conread position: | 65-267 |
| Cow position: | chr8:55569534-55569736 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 187, 162 |