Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010060F10.5.5 |
| Conread position: | 19-1858 |
| Cow position: | chr1:81316173-81314321 (view UCSC Genome Browser custom track) |
| Alignm length: | 1853 |
| Alignm identity: | 1734 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1527, 0 |
| Conread position: | 1851-2364 |
| Cow position: | chr1:81314136-81313635 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 128 |
| Conread position: | 1851-2360 |
| Cow position: | chr10:32486047-32486544 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 128 |
| Conread position: | 1851-2364 |
| Cow position: | chr10:14609705-14610206 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 128 |
| Conread position: | 1851-2364 |
| Cow position: | chr10:25851788-25851305 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 128 |
| Conread position: | 1851-2001 |
| Cow position: | chr11:54720867-54720718 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 86 |
| Conread position: | 1851-2364 |
| Cow position: | chr11:54717941-54717440 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 129 |
| Conread position: | 429-723 |
| Cow position: | chr12:20563598-20563304 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 820-1014 |
| Cow position: | chr12:20550665-20550471 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1851-2364 |
| Cow position: | chr14:3174383-3173880 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 128 |
| Conread position: | 609-1152 |
| Cow position: | chr18:16534519-16535056 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 0 |
| Conread position: | 1086-1856 |
| Cow position: | chr18:16535065-16535842 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 703 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 460, 48 |
| Conread position: | 1851-2260 |
| Cow position: | chr18:26671214-26670810 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 125 |
| Conread position: | 1851-2364 |
| Cow position: | chr2:78703745-78703243 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 128 |
| Conread position: | 1551-1858 |
| Cow position: | chr20:20412999-20413317 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 45-996 |
| Cow position: | chr23:25528155-25527214 (view UCSC Genome Browser custom track) |
| Alignm length: | 952 |
| Alignm identity: | 890 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1851-2364 |
| Cow position: | chr28:22893973-22894475 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 128 |
| Conread position: | 1851-2364 |
| Cow position: | chr28:24470047-24469546 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 125 |
| Conread position: | 1851-2364 |
| Cow position: | chr29:4446235-4445734 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 128 |
| Conread position: | 1876-2364 |
| Cow position: | chr29:34597607-34598084 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 103 |
| Conread position: | 2133-2364 |
| Cow position: | chr29:34596590-34596814 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 421-723 |
| Cow position: | chr3:77670704-77671006 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 817-998 |
| Cow position: | chr3:77672036-77672217 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1169-1436 |
| Cow position: | chr3:66569676-66569409 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1419-1858 |
| Cow position: | chr3:66568268-66567816 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 1482-1858 |
| Cow position: | chr3:81495893-81495506 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 218 |
| Conread position: | 1851-2364 |
| Cow position: | chr3:62621272-62620771 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 128 |
| Conread position: | 1399-1858 |
| Cow position: | chr7:19994212-19993739 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 1851-2364 |
| Cow position: | chr9:24722530-24722029 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 128 |
| Conread position: | 69-227 |
| Cow position: | chrX:22088872-22089030 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 151 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-425 |
| Cow position: | chrX:22090056-22090253 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 418-723 |
| Cow position: | chrX:22091567-22091872 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 720-820 |
| Cow position: | chrX:22092673-22092773 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 821-1016 |
| Cow position: | chrX:22092972-22093167 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1016-1101 |
| Cow position: | chrX:22093511-22093596 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1100-1204 |
| Cow position: | chrX:22094022-22094126 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1243-1354 |
| Cow position: | chrX:22094905-22095016 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 109 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1354-1858 |
| Cow position: | chrX:22095708-22096225 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 1851-2364 |
| Cow position: | chrX:22096410-22096912 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 125 |
| Conread position: | 1851-2364 |
| Cow position: | chrX:34001643-34002144 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 128 |