Cow genome map
| Conread name: | Ss1.1-Liv1-LVRM10074F04.5 |
| Conread position: | 1-551 |
| Cow position: | chr1:93132805-93133351 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 505, 17 |
| Conread position: | 773-912 |
| Cow position: | chr1:87115274-87115132 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 773-932 |
| Cow position: | chr1:55114231-55114069 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 774-912 |
| Cow position: | chr1:27940297-27940157 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 119, 44 |
| Conread position: | 774-912 |
| Cow position: | chr1:70661927-70662068 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 775-944 |
| Cow position: | chr1:46201828-46202000 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 118, 74 |
| Conread position: | 775-945 |
| Cow position: | chr1:90041392-90041570 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 783-912 |
| Cow position: | chr1:14026258-14026126 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 765-918 |
| Cow position: | chr10:10075411-10075566 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 771-891 |
| Cow position: | chr10:68256621-68256501 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 773-945 |
| Cow position: | chr10:25501377-25501549 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 146, 117 |
| Conread position: | 774-891 |
| Cow position: | chr10:69887368-69887484 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 774-912 |
| Cow position: | chr10:25949626-25949487 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 119, 17 |
| Conread position: | 774-920 |
| Cow position: | chr10:16749858-16750004 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 140, 121 |
| Conread position: | 774-945 |
| Cow position: | chr10:29743675-29743852 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 775-909 |
| Cow position: | chr10:62888546-62888413 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 775-945 |
| Cow position: | chr10:10522831-10523000 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 119, 16 |
| Conread position: | 777-945 |
| Cow position: | chr10:22588408-22588238 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 117, 20 |
| Conread position: | 771-912 |
| Cow position: | chr11:12337166-12337027 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 122, 80 |
| Conread position: | 771-912 |
| Cow position: | chr11:69429518-69429662 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 774-905 |
| Cow position: | chr11:47693581-47693449 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 774-912 |
| Cow position: | chr11:2536296-2536435 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 119, 40 |
| Conread position: | 775-891 |
| Cow position: | chr11:41534468-41534583 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 771-891 |
| Cow position: | chr12:10880503-10880622 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 773-894 |
| Cow position: | chr12:26545211-26545090 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-912 |
| Cow position: | chr12:10412316-10412175 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 768-889 |
| Cow position: | chr13:1415930-1416053 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 773-898 |
| Cow position: | chr13:3140322-3140447 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 775-903 |
| Cow position: | chr13:14024379-14024250 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 775-938 |
| Cow position: | chr13:5233478-5233644 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 126, 74 |
| Conread position: | 776-947 |
| Cow position: | chr13:19250593-19250767 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 117, 73 |
| Conread position: | 764-891 |
| Cow position: | chr14:40351709-40351581 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 764-930 |
| Cow position: | chr14:36647418-36647256 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 765-891 |
| Cow position: | chr14:38341180-38341056 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 768-891 |
| Cow position: | chr14:3067242-3067117 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 774-890 |
| Cow position: | chr14:45499836-45499952 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-912 |
| Cow position: | chr14:26155547-26155687 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 776-945 |
| Cow position: | chr14:25435775-25435603 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 118, 73 |
| Conread position: | 783-945 |
| Cow position: | chr14:26159767-26159602 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 773-891 |
| Cow position: | chr15:1996694-1996576 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-917 |
| Cow position: | chr15:12726615-12726759 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 46 |
| Conread position: | 774-925 |
| Cow position: | chr15:6173817-6173970 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 791-945 |
| Cow position: | chr15:526615-526772 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 103, 53 |
| Conread position: | 793-945 |
| Cow position: | chr15:47550964-47550808 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 814-945 |
| Cow position: | chr15:33700990-33700855 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 834-944 |
| Cow position: | chr15:28978713-28978826 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 749-912 |
| Cow position: | chr16:7180064-7180231 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 773-912 |
| Cow position: | chr16:54397610-54397468 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 773-941 |
| Cow position: | chr16:23891802-23891629 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 774-936 |
| Cow position: | chr16:32593046-32592878 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 110 |
| Conread position: | 764-894 |
| Cow position: | chr17:36316959-36317086 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 773-891 |
| Cow position: | chr17:10199598-10199480 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-887 |
| Cow position: | chr17:25742895-25743008 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-944 |
| Cow position: | chr17:2806116-2805943 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 120, 17 |
| Conread position: | 776-938 |
| Cow position: | chr17:31602595-31602436 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 121, 28 |
| Conread position: | 777-912 |
| Cow position: | chr17:44534971-44534833 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 782-917 |
| Cow position: | chr17:31831861-31831724 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 118, 134 |
| Conread position: | 814-940 |
| Cow position: | chr17:29040328-29040458 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 764-891 |
| Cow position: | chr18:4769580-4769705 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 768-912 |
| Cow position: | chr18:16405519-16405372 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 773-891 |
| Cow position: | chr18:41423921-41424039 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 773-891 |
| Cow position: | chr18:42816678-42816796 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-912 |
| Cow position: | chr18:15808812-15808671 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 774-912 |
| Cow position: | chr18:40055929-40056070 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 774-945 |
| Cow position: | chr18:16580501-16580326 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 775-888 |
| Cow position: | chr18:44075563-44075450 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 776-944 |
| Cow position: | chr18:48979521-48979361 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 144, 107 |
| Conread position: | 814-944 |
| Cow position: | chr18:51786169-51786303 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 773-909 |
| Cow position: | chr19:39289378-39289241 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 773-940 |
| Cow position: | chr19:35608150-35608320 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 121, 15 |
| Conread position: | 774-891 |
| Cow position: | chr19:14538425-14538540 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 774-891 |
| Cow position: | chr19:23811907-23812025 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 774-891 |
| Cow position: | chr19:30145858-30145740 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 774-945 |
| Cow position: | chr19:4325204-4325029 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 774-945 |
| Cow position: | chr19:28439337-28439512 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 779-946 |
| Cow position: | chr19:28442119-28442289 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 140 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 783-945 |
| Cow position: | chr19:13878772-13878605 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 789-912 |
| Cow position: | chr19:13331711-13331588 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 797-938 |
| Cow position: | chr19:36475553-36475409 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 730-912 |
| Cow position: | chr2:47530959-47531145 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 36 |
| Conread position: | 764-912 |
| Cow position: | chr2:57647130-57647282 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 773-912 |
| Cow position: | chr2:37725603-37725746 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 774-889 |
| Cow position: | chr2:26282307-26282422 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-891 |
| Cow position: | chr2:1333610-1333727 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-909 |
| Cow position: | chr2:41437700-41437562 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 775-945 |
| Cow position: | chr2:60934145-60933976 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 144, 74 |
| Conread position: | 778-912 |
| Cow position: | chr2:56299728-56299865 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 774-891 |
| Cow position: | chr20:27924231-27924347 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 774-912 |
| Cow position: | chr20:20765558-20765699 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 773-891 |
| Cow position: | chr21:3392336-3392219 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 26 |
| Conread position: | 773-912 |
| Cow position: | chr21:3387834-3387692 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 773-912 |
| Cow position: | chr21:46775369-46775511 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 774-912 |
| Cow position: | chr21:39666009-39666149 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 775-893 |
| Cow position: | chr21:11253454-11253336 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 777-939 |
| Cow position: | chr21:37509555-37509722 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 774-945 |
| Cow position: | chr22:12964952-12964778 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 776-891 |
| Cow position: | chr22:4338629-4338514 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 769-945 |
| Cow position: | chr23:6664281-6664101 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 772-912 |
| Cow position: | chr23:8761112-8760969 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 774-942 |
| Cow position: | chr23:11731086-11730915 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 56, 150 |
| Conread position: | 774-945 |
| Cow position: | chr23:23937939-23937774 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 145, 118 |
| Conread position: | 774-945 |
| Cow position: | chr23:26323727-26323549 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 772-945 |
| Cow position: | chr24:16956337-16956514 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 774-906 |
| Cow position: | chr24:2129323-2129458 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 775-914 |
| Cow position: | chr24:30693590-30693448 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 775-947 |
| Cow position: | chr24:35052929-35053108 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 764-891 |
| Cow position: | chr25:22129502-22129630 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 69 |
| Conread position: | 774-912 |
| Cow position: | chr25:27376027-27375886 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 774-946 |
| Cow position: | chr25:24490999-24491176 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 764-893 |
| Cow position: | chr26:20858679-20858550 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 767-889 |
| Cow position: | chr26:8242761-8242882 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 773-946 |
| Cow position: | chr26:13713328-13713506 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 774-941 |
| Cow position: | chr26:17662518-17662345 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 144 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 774-940 |
| Cow position: | chr27:25167997-25168167 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 774-891 |
| Cow position: | chr28:3679291-3679175 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 774-891 |
| Cow position: | chr28:4254207-4254324 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-942 |
| Cow position: | chr28:7916313-7916142 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 118, 75 |
| Conread position: | 774-948 |
| Cow position: | chr29:898945-898764 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 776-879 |
| Cow position: | chr29:5224974-5224871 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 776-925 |
| Cow position: | chr29:39587644-39587796 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 118, 70 |
| Conread position: | 781-891 |
| Cow position: | chr29:19651820-19651710 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 737-890 |
| Cow position: | chr3:25576886-25576727 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 771-879 |
| Cow position: | chr3:61964607-61964499 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-912 |
| Cow position: | chr3:5449035-5449177 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 774-912 |
| Cow position: | chr3:67818286-67818145 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 775-947 |
| Cow position: | chr3:27127426-27127256 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 142, 12 |
| Conread position: | 776-890 |
| Cow position: | chr3:23429696-23429810 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-945 |
| Cow position: | chr3:67825046-67824880 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 774-891 |
| Cow position: | chr4:21400709-21400826 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 812-944 |
| Cow position: | chr4:45560290-45560155 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 82, 6 |
| Conread position: | 771-910 |
| Cow position: | chr5:45694498-45694640 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 773-912 |
| Cow position: | chr5:2216397-2216539 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 774-907 |
| Cow position: | chr5:68086462-68086595 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-912 |
| Cow position: | chr5:44113927-44113784 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 774-912 |
| Cow position: | chr5:56812942-56812801 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 774-945 |
| Cow position: | chr5:67954224-67954399 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 146 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 775-944 |
| Cow position: | chr5:10037650-10037821 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 119, 76 |
| Conread position: | 783-945 |
| Cow position: | chr5:45001933-45002098 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 66 |
| Conread position: | 773-890 |
| Cow position: | chr6:32921813-32921697 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 773-916 |
| Cow position: | chr6:18790692-18790838 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 121, 25 |
| Conread position: | 774-945 |
| Cow position: | chr6:26948446-26948269 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 775-941 |
| Cow position: | chr6:14847582-14847747 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 119, 56 |
| Conread position: | 775-945 |
| Cow position: | chr6:340590-340762 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 76 |
| Conread position: | 764-909 |
| Cow position: | chr7:35030213-35030357 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 774-909 |
| Cow position: | chr7:40195066-40194931 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-912 |
| Cow position: | chr7:62048271-62048130 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 774-942 |
| Cow position: | chr7:4928234-4928405 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 119, 75 |
| Conread position: | 774-947 |
| Cow position: | chr7:43306662-43306490 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 119, 70 |
| Conread position: | 778-944 |
| Cow position: | chr8:17930799-17930969 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 773-891 |
| Cow position: | chr9:9257338-9257454 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 773-891 |
| Cow position: | chr9:10726921-10726803 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-890 |
| Cow position: | chr9:3440112-3439996 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-945 |
| Cow position: | chr9:6595880-6595705 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 775-944 |
| Cow position: | chr9:40633426-40633600 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 779-945 |
| Cow position: | chr9:20709624-20709454 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 773-891 |
| Cow position: | chrX:25950336-25950218 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 774-940 |
| Cow position: | chrX:36190607-36190438 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 120, 17 |
| Conread position: | 774-945 |
| Cow position: | chrX:41748156-41748323 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 120, 25 |
| Conread position: | 775-945 |
| Cow position: | chrX:21292589-21292763 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 88, 74 |
| Conread position: | 802-945 |
| Cow position: | chrX:25950904-25950756 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 0 |