Cow genome map
Conread name: | Ss1.1-Liv1-LVRM10130D03.5 |
Conread position: | 22-401 |
Cow position: | chr1:69374742-69374381 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 93-403 |
Cow position: | chr1:30516493-30516803 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 110-398 |
Cow position: | chr1:6621082-6621373 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 168 |
Conread position: | 22-403 |
Cow position: | chr10:15825821-15825440 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-403 |
Cow position: | chr10:45269931-45270309 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 0 |
Conread position: | 23-401 |
Cow position: | chr10:69640061-69639686 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 250, 0 |
Conread position: | 22-403 |
Cow position: | chr11:7724243-7724624 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 25-403 |
Cow position: | chr11:43057929-43058307 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 34-403 |
Cow position: | chr11:68582203-68581834 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 110-398 |
Cow position: | chr11:82946827-82947118 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 168 |
Conread position: | 289-403 |
Cow position: | chr11:16255176-16255290 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 105 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-457 |
Cow position: | chr12:1673601-1674054 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 15-455 |
Cow position: | chr12:1662189-1662621 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 390, 0 |
Conread position: | 22-403 |
Cow position: | chr12:30861722-30861341 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 31-403 |
Cow position: | chr12:1636204-1635807 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 275 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 39, 13 |
Conread position: | 15-309 |
Cow position: | chr13:27850674-27850378 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 22-403 |
Cow position: | chr13:7598936-7599311 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 22-403 |
Cow position: | chr13:52263849-52263468 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 300-403 |
Cow position: | chr13:42559945-42560048 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 95 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-403 |
Cow position: | chr15:11070395-11070014 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-403 |
Cow position: | chr15:35507082-35506715 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 0 |
Conread position: | 36-403 |
Cow position: | chr15:14106154-14106521 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 169-454 |
Cow position: | chr15:46718116-46717840 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 235, 247 |
Conread position: | 22-403 |
Cow position: | chr16:49012025-49011644 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-403 |
Cow position: | chr16:49773480-49773861 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-403 |
Cow position: | chr16:52573338-52573718 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 22-403 |
Cow position: | chr17:36084422-36084041 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-401 |
Cow position: | chr18:46143378-46143754 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 22-403 |
Cow position: | chr19:6987697-6987320 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 0 |
Conread position: | 22-403 |
Cow position: | chr19:29154125-29154506 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-403 |
Cow position: | chr19:41835181-41834803 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 0 |
Conread position: | 22-403 |
Cow position: | chr2:58003332-58002954 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 0 |
Conread position: | 193-403 |
Cow position: | chr2:9225249-9225459 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-403 |
Cow position: | chr20:28491521-28491901 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 133-378 |
Cow position: | chr20:5115426-5115671 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 156 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 200-403 |
Cow position: | chr20:37397972-37397769 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 15-403 |
Cow position: | chr22:41852837-41852449 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 229-403 |
Cow position: | chr22:41962300-41962478 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 157 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 4-457 |
Cow position: | chr23:24223239-24223693 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 424, 0 |
Conread position: | 18-455 |
Cow position: | chr23:24170538-24170976 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 410, 0 |
Conread position: | 21-456 |
Cow position: | chr23:24185731-24186160 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 392, 0 |
Conread position: | 21-457 |
Cow position: | chr23:25804040-25804467 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 383, 0 |
Conread position: | 37-455 |
Cow position: | chr23:26341300-26340882 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 371, 391 |
Conread position: | 50-456 |
Cow position: | chr23:26337826-26338230 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 359, 24 |
Conread position: | 211-403 |
Cow position: | chr23:35659464-35659656 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 235-403 |
Cow position: | chr23:5740794-5740626 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 152 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 459-622 |
Cow position: | chr23:24235455-24235630 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 135 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 59-403 |
Cow position: | chr24:40172648-40172992 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 308-403 |
Cow position: | chr26:29165765-29165860 (view UCSC Genome Browser custom track) |
Alignm length: | 96 |
Alignm identity: | 86 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 45-403 |
Cow position: | chr27:26613730-26614088 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 174-403 |
Cow position: | chr27:27865540-27865769 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 260-403 |
Cow position: | chr28:27049905-27050048 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 128 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-403 |
Cow position: | chr29:1838846-1839227 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-398 |
Cow position: | chr3:17591897-17592281 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 19-455 |
Cow position: | chr3:17645417-17645861 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 391, 0 |
Conread position: | 22-398 |
Cow position: | chr3:17614442-17614818 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-398 |
Cow position: | chr3:17624754-17624378 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-409 |
Cow position: | chr3:1077455-1077842 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 381, 198 |
Conread position: | 22-455 |
Cow position: | chr3:62459268-62458823 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 382, 0 |
Conread position: | 22-455 |
Cow position: | chr3:62478430-62478003 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 386, 0 |
Conread position: | 22-456 |
Cow position: | chr3:62431042-62430615 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 382, 0 |
Conread position: | 22-457 |
Cow position: | chr3:62448578-62449015 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 382, 414 |
Conread position: | 270-403 |
Cow position: | chr3:56588624-56588755 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 118 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 22-403 |
Cow position: | chr4:15925997-15925616 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 163-398 |
Cow position: | chr4:64390607-64390842 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 247-403 |
Cow position: | chr4:35724460-35724304 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 138 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-403 |
Cow position: | chr5:13917375-13916994 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 28-403 |
Cow position: | chr5:31548158-31548533 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 295-403 |
Cow position: | chr5:8026503-8026395 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 98 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 323-403 |
Cow position: | chr5:45989719-45989639 (view UCSC Genome Browser custom track) |
Alignm length: | 81 |
Alignm identity: | 74 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-95 |
Cow position: | chr6:41039090-41039181 (view UCSC Genome Browser custom track) |
Alignm length: | 92 |
Alignm identity: | 85 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-403 |
Cow position: | chr6:7483636-7484016 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 22-403 |
Cow position: | chr6:56962170-56962552 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 0 |
Conread position: | 22-455 |
Cow position: | chr6:39764559-39764126 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-457 |
Cow position: | chr6:39755834-39755405 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 384, 0 |
Conread position: | 52-403 |
Cow position: | chr6:20715442-20715793 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 175-324 |
Cow position: | chr6:37164862-37165011 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 135 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-403 |
Cow position: | chr7:13894776-13894395 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-455 |
Cow position: | chr7:2957920-2958346 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 380, 0 |
Conread position: | 163-403 |
Cow position: | chr8:11335272-11335032 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 229-403 |
Cow position: | chr8:36912090-36911916 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 153 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 67-403 |
Cow position: | chr9:36521591-36521255 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 159-403 |
Cow position: | chr9:35746073-35746317 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-403 |
Cow position: | chrX:6377841-6378222 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 55-393 |
Cow position: | chrX:15369276-15369607 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 219 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 128-403 |
Cow position: | chrX:22916340-22916065 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 150-370 |
Cow position: | chrX:16572722-16572502 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 155 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 0, 0 |