Cow genome map

Conread name: Ss1.1-Liv1-LVRM10130D03.5

Conread position: 22-401
Cow position: chr1:69374742-69374381 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 93-403
Cow position: chr1:30516493-30516803 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 110-398
Cow position: chr1:6621082-6621373 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 168

Conread position: 22-403
Cow position: chr10:15825821-15825440 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-403
Cow position: chr10:45269931-45270309 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 23-401
Cow position: chr10:69640061-69639686 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 22-403
Cow position: chr11:7724243-7724624 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 25-403
Cow position: chr11:43057929-43058307 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 34-403
Cow position: chr11:68582203-68581834 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 110-398
Cow position: chr11:82946827-82947118 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 168

Conread position: 289-403
Cow position: chr11:16255176-16255290 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 105
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-457
Cow position: chr12:1673601-1674054 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 15-455
Cow position: chr12:1662189-1662621 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 0

Conread position: 22-403
Cow position: chr12:30861722-30861341 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 31-403
Cow position: chr12:1636204-1635807 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 13

Conread position: 15-309
Cow position: chr13:27850674-27850378 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 22-403
Cow position: chr13:7598936-7599311 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 22-403
Cow position: chr13:52263849-52263468 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 300-403
Cow position: chr13:42559945-42560048 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 95
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 22-403
Cow position: chr15:11070395-11070014 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-403
Cow position: chr15:35507082-35506715 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 0

Conread position: 36-403
Cow position: chr15:14106154-14106521 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 169-454
Cow position: chr15:46718116-46717840 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 247

Conread position: 22-403
Cow position: chr16:49012025-49011644 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-403
Cow position: chr16:49773480-49773861 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-403
Cow position: chr16:52573338-52573718 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 22-403
Cow position: chr17:36084422-36084041 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-401
Cow position: chr18:46143378-46143754 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 22-403
Cow position: chr19:6987697-6987320 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 22-403
Cow position: chr19:29154125-29154506 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-403
Cow position: chr19:41835181-41834803 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 22-403
Cow position: chr2:58003332-58002954 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 193-403
Cow position: chr2:9225249-9225459 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-403
Cow position: chr20:28491521-28491901 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 133-378
Cow position: chr20:5115426-5115671 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 200-403
Cow position: chr20:37397972-37397769 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-403
Cow position: chr22:41852837-41852449 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 229-403
Cow position: chr22:41962300-41962478 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 4-457
Cow position: chr23:24223239-24223693 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 0

Conread position: 18-455
Cow position: chr23:24170538-24170976 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 410, 0

Conread position: 21-456
Cow position: chr23:24185731-24186160 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 0

Conread position: 21-457
Cow position: chr23:25804040-25804467 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 0

Conread position: 37-455
Cow position: chr23:26341300-26340882 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 391

Conread position: 50-456
Cow position: chr23:26337826-26338230 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 24

Conread position: 211-403
Cow position: chr23:35659464-35659656 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 235-403
Cow position: chr23:5740794-5740626 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 459-622
Cow position: chr23:24235455-24235630 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 59-403
Cow position: chr24:40172648-40172992 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 308-403
Cow position: chr26:29165765-29165860 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 86
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 45-403
Cow position: chr27:26613730-26614088 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 174-403
Cow position: chr27:27865540-27865769 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 260-403
Cow position: chr28:27049905-27050048 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 128
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 22-403
Cow position: chr29:1838846-1839227 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-398
Cow position: chr3:17591897-17592281 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 19-455
Cow position: chr3:17645417-17645861 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 0

Conread position: 22-398
Cow position: chr3:17614442-17614818 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-398
Cow position: chr3:17624754-17624378 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-409
Cow position: chr3:1077455-1077842 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 198

Conread position: 22-455
Cow position: chr3:62459268-62458823 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 0

Conread position: 22-455
Cow position: chr3:62478430-62478003 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 0

Conread position: 22-456
Cow position: chr3:62431042-62430615 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 0

Conread position: 22-457
Cow position: chr3:62448578-62449015 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 414

Conread position: 270-403
Cow position: chr3:56588624-56588755 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 118
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 22-403
Cow position: chr4:15925997-15925616 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 163-398
Cow position: chr4:64390607-64390842 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 247-403
Cow position: chr4:35724460-35724304 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 138
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-403
Cow position: chr5:13917375-13916994 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 28-403
Cow position: chr5:31548158-31548533 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 295-403
Cow position: chr5:8026503-8026395 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 98
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 323-403
Cow position: chr5:45989719-45989639 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 74
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-95
Cow position: chr6:41039090-41039181 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 85
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 22-403
Cow position: chr6:7483636-7484016 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 22-403
Cow position: chr6:56962170-56962552 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 0

Conread position: 22-455
Cow position: chr6:39764559-39764126 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-457
Cow position: chr6:39755834-39755405 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 0

Conread position: 52-403
Cow position: chr6:20715442-20715793 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 175-324
Cow position: chr6:37164862-37165011 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 135
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-403
Cow position: chr7:13894776-13894395 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-455
Cow position: chr7:2957920-2958346 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 0

Conread position: 163-403
Cow position: chr8:11335272-11335032 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 229-403
Cow position: chr8:36912090-36911916 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 67-403
Cow position: chr9:36521591-36521255 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 159-403
Cow position: chr9:35746073-35746317 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-403
Cow position: chrX:6377841-6378222 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 55-393
Cow position: chrX:15369276-15369607 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 128-403
Cow position: chrX:22916340-22916065 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-370
Cow position: chrX:16572722-16572502 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0