Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010044D01.5 |
| Conread position: | 121-323 |
| Cow position: | chr3:40068031-40068233 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-323 |
| Cow position: | chr3:41086501-41086703 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 129-323 |
| Cow position: | chr3:41062633-41062439 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 322-451 |
| Cow position: | chr3:40035476-40035605 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 82, 76 |
| Conread position: | 322-451 |
| Cow position: | chr3:40070814-40070943 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 322-451 |
| Cow position: | chr3:41006459-41006330 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 76 |
| Conread position: | 322-451 |
| Cow position: | chr3:41061916-41061787 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 120 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 449-563 |
| Cow position: | chr3:40038043-40038157 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 449-563 |
| Cow position: | chr3:40071846-40071960 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 449-563 |
| Cow position: | chr3:41060032-41059918 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 561-734 |
| Cow position: | chr3:40038357-40038533 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 561-756 |
| Cow position: | chr3:41055641-41055443 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 561-757 |
| Cow position: | chr3:40072228-40072427 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 754-999 |
| Cow position: | chr3:40073047-40073292 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 764-999 |
| Cow position: | chr3:41055092-41054857 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 998-1276 |
| Cow position: | chr3:41052307-41052029 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 998-1278 |
| Cow position: | chr3:40074145-40074425 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1000-1278 |
| Cow position: | chr3:40993439-40993161 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1005-1269 |
| Cow position: | chr3:40043034-40043298 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1272-1492 |
| Cow position: | chr3:40075064-40075284 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1281-1492 |
| Cow position: | chr3:41050625-41050414 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 91 |
| Conread position: | 1489-1594 |
| Cow position: | chr3:40075839-40075944 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1593-1789 |
| Cow position: | chr3:40076185-40076381 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1624-1782 |
| Cow position: | chr3:41047130-41046972 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1784-2863 |
| Cow position: | chr3:40077475-40078560 (view UCSC Genome Browser custom track) |
| Alignm length: | 1111 |
| Alignm identity: | 793 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 244 |
| Conread position: | 2888-3050 |
| Cow position: | chr3:40078725-40078885 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 63 |