Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010047H11.5.377 |
| Conread position: | 3-148 |
| Cow position: | chr11:85447681-85447539 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 147-260 |
| Cow position: | chr11:85447272-85447159 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 112 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 252-373 |
| Cow position: | chr11:85447090-85446969 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-1573 |
| Cow position: | chr11:85446444-85445236 (view UCSC Genome Browser custom track) |
| Alignm length: | 1218 |
| Alignm identity: | 1127 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1069, 1119 |
| Conread position: | 1073-1269 |
| Cow position: | chr11:79469025-79468829 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 290-1421 |
| Cow position: | chr12:27341170-27340040 (view UCSC Genome Browser custom track) |
| Alignm length: | 1132 |
| Alignm identity: | 953 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 498, 0 |
| Conread position: | 376-1419 |
| Cow position: | chr13:37744719-37743673 (view UCSC Genome Browser custom track) |
| Alignm length: | 1048 |
| Alignm identity: | 868 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 658, 663 |
| Conread position: | 1040-1377 |
| Cow position: | chr14:42472178-42471853 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 16 |
| Conread position: | 466-835 |
| Cow position: | chr17:45756447-45756076 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 466-1141 |
| Cow position: | chr17:45721918-45722595 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 262-373 |
| Cow position: | chr18:15604687-15604798 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-1433 |
| Cow position: | chr18:15605534-15606602 (view UCSC Genome Browser custom track) |
| Alignm length: | 1069 |
| Alignm identity: | 969 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1053, 0 |
| Conread position: | 608-1141 |
| Cow position: | chr2:65211016-65211549 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 336 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 135, 140 |
| Conread position: | 147-259 |
| Cow position: | chr23:31858834-31858722 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 147-260 |
| Cow position: | chr23:20803043-20802930 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 147-279 |
| Cow position: | chr23:31823407-31823279 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 147-279 |
| Cow position: | chr23:31836271-31836143 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 252-373 |
| Cow position: | chr23:31858459-31858338 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 252-380 |
| Cow position: | chr23:31822966-31822837 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 252-380 |
| Cow position: | chr23:31835829-31835700 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 349-1421 |
| Cow position: | chr23:20802303-20801231 (view UCSC Genome Browser custom track) |
| Alignm length: | 1073 |
| Alignm identity: | 938 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-1427 |
| Cow position: | chr23:31822146-31821086 (view UCSC Genome Browser custom track) |
| Alignm length: | 1061 |
| Alignm identity: | 998 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 0 |
| Conread position: | 368-1439 |
| Cow position: | chr23:31858004-31856934 (view UCSC Genome Browser custom track) |
| Alignm length: | 1072 |
| Alignm identity: | 1007 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1061, 0 |
| Conread position: | 1573-1668 |
| Cow position: | chr23:31856793-31856698 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-1422 |
| Cow position: | chr24:29219732-29218678 (view UCSC Genome Browser custom track) |
| Alignm length: | 1055 |
| Alignm identity: | 955 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1443-1572 |
| Cow position: | chr26:11111865-11111745 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1467-1572 |
| Cow position: | chr4:10105383-10105488 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 477-1141 |
| Cow position: | chr5:67434065-67433401 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 413 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 63, 50 |
| Conread position: | 147-259 |
| Cow position: | chr7:13892053-13892165 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 257-373 |
| Cow position: | chr7:13892272-13892388 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 363-1432 |
| Cow position: | chr7:13895705-13896772 (view UCSC Genome Browser custom track) |
| Alignm length: | 1071 |
| Alignm identity: | 984 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 1021 |