Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01B020038.5 |
| Conread position: | 730-855 |
| Cow position: | chr1:43569418-43569288 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 107 |
| Conread position: | 730-864 |
| Cow position: | chr10:4500017-4500156 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 101 |
| Conread position: | 730-864 |
| Cow position: | chr10:29630208-29630062 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-103 |
| Cow position: | chr11:30185523-30185422 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 101-290 |
| Cow position: | chr11:30175783-30175594 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-398 |
| Cow position: | chr11:30171165-30171056 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 392-767 |
| Cow position: | chr11:30169960-30169599 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 215 |
| Conread position: | 729-849 |
| Cow position: | chr11:21897994-21897874 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 107 |
| Conread position: | 730-864 |
| Cow position: | chr13:15559100-15559245 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 715-863 |
| Cow position: | chr15:24045270-24045427 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 729-864 |
| Cow position: | chr15:31859317-31859166 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 732-864 |
| Cow position: | chr15:50148967-50149104 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 99 |
| Conread position: | 703-864 |
| Cow position: | chr16:24064344-24064516 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 730-864 |
| Cow position: | chr16:32937810-32937953 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 732-864 |
| Cow position: | chr16:10439546-10439685 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 730-864 |
| Cow position: | chr17:33283480-33283331 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 730-864 |
| Cow position: | chr19:30453278-30453129 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 730-864 |
| Cow position: | chr2:32433809-32433662 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 730-864 |
| Cow position: | chr2:54694481-54694628 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 732-863 |
| Cow position: | chr2:11684548-11684687 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 730-864 |
| Cow position: | chr20:13794057-13794203 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 730-864 |
| Cow position: | chr22:22957338-22957191 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 730-864 |
| Cow position: | chr22:40372389-40372536 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 732-864 |
| Cow position: | chr22:10548627-10548771 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 730-864 |
| Cow position: | chr23:37200544-37200397 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 734-864 |
| Cow position: | chr23:16055755-16055885 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 732-829 |
| Cow position: | chr26:13772864-13772765 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 730-829 |
| Cow position: | chr3:53048915-53048815 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 730-860 |
| Cow position: | chr3:74851245-74851101 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 730-864 |
| Cow position: | chr4:57985726-57985871 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 730-864 |
| Cow position: | chr4:67682907-67683051 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 122 |
| Conread position: | 730-864 |
| Cow position: | chr5:40758728-40758878 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 730-864 |
| Cow position: | chr6:41805208-41805354 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 54, 117 |
| Conread position: | 732-864 |
| Cow position: | chr6:28702760-28702615 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 732-864 |
| Cow position: | chr6:50718622-50718762 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 708-830 |
| Cow position: | chr7:3322128-3322003 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 730-864 |
| Cow position: | chr7:39132794-39132645 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 730-864 |
| Cow position: | chr7:66572960-66572828 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 103 |
| Conread position: | 732-864 |
| Cow position: | chr7:67677108-67677257 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 706-864 |
| Cow position: | chr8:24191165-24191335 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 707-864 |
| Cow position: | chr8:2887966-2888134 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 730-864 |
| Cow position: | chr8:32317335-32317196 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 107 |
| Conread position: | 730-864 |
| Cow position: | chr8:45158309-45158167 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 99, 56 |
| Conread position: | 732-864 |
| Cow position: | chr8:42319045-42318900 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 707-864 |
| Cow position: | chrX:4766771-4766614 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 77, 16 |
| Conread position: | 730-864 |
| Cow position: | chrX:31727255-31727405 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 0 |