Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01C090068.5 |
| Conread position: | 408-542 |
| Cow position: | chr10:21313877-21313742 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 531-993 |
| Cow position: | chr10:21313517-21313054 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 36 |
| Conread position: | 106-361 |
| Cow position: | chr11:7932087-7931843 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 49 |
| Conread position: | 394-1030 |
| Cow position: | chr11:7931848-7931224 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 1053-1257 |
| Cow position: | chr11:7931227-7931026 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 608-721 |
| Cow position: | chr12:12023766-12023878 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 83-576 |
| Cow position: | chr15:39340320-39339834 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 153-614 |
| Cow position: | chr15:5072665-5072211 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 191 |
| Conread position: | 562-1260 |
| Cow position: | chr15:39339658-39338958 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 268 |
| Conread position: | 635-808 |
| Cow position: | chr15:5071776-5071602 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 814-1035 |
| Cow position: | chr15:5071468-5071231 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 203 |
| Conread position: | 1007-1264 |
| Cow position: | chr15:5071136-5070881 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 60 |
| Conread position: | 125-649 |
| Cow position: | chr17:9822831-9822341 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 73 |
| Conread position: | 629-1235 |
| Cow position: | chr17:9822339-9821726 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 10-1273 |
| Cow position: | chr18:30167689-30168938 (view UCSC Genome Browser custom track) |
| Alignm length: | 1275 |
| Alignm identity: | 1056 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 233 |
| Conread position: | 139-755 |
| Cow position: | chr2:14613320-14613947 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 211 |
| Conread position: | 235-808 |
| Cow position: | chr2:17116590-17116020 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 233 |
| Conread position: | 763-921 |
| Cow position: | chr2:14613985-14614144 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 89, 47 |
| Conread position: | 802-1259 |
| Cow position: | chr2:17116003-17115545 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 974-1241 |
| Cow position: | chr2:14614161-14614427 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 25 |
| Conread position: | 1-125 |
| Cow position: | chr21:13078999-13079124 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 178-1260 |
| Cow position: | chr21:13079147-13080208 (view UCSC Genome Browser custom track) |
| Alignm length: | 1093 |
| Alignm identity: | 931 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 29 |
| Conread position: | 1050-1254 |
| Cow position: | chr22:28025268-28025460 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 99, 61 |
| Conread position: | 735-1075 |
| Cow position: | chr23:29327107-29326780 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 83 |
| Conread position: | 1061-1253 |
| Cow position: | chr23:29326283-29326099 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 64-1269 |
| Cow position: | chr29:19065846-19067049 (view UCSC Genome Browser custom track) |
| Alignm length: | 1217 |
| Alignm identity: | 1081 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 384, 283 |
| Conread position: | 1050-1256 |
| Cow position: | chr4:68952961-68953166 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 104 |
| Conread position: | 49-1213 |
| Cow position: | chr5:61154482-61155647 (view UCSC Genome Browser custom track) |
| Alignm length: | 1192 |
| Alignm identity: | 925 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 46 |
| Conread position: | 113-617 |
| Cow position: | chr7:11423341-11422840 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 164 |
| Conread position: | 601-805 |
| Cow position: | chr7:11422470-11422251 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 800-1050 |
| Cow position: | chr7:11422127-11421867 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 87 |
| Conread position: | 143-377 |
| Cow position: | chr8:43401402-43401179 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 110, 43 |