Cow genome map
| Conread name: | Ss1.1-LyN1-MLN01H080052.5 |
| Conread position: | 352-555 |
| Cow position: | chr10:10799673-10799879 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 8, 46 |
| Conread position: | 364-527 |
| Cow position: | chr10:10159194-10159360 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 387-703 |
| Cow position: | chr10:10724209-10724522 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 13, 131 |
| Conread position: | 408-677 |
| Cow position: | chr10:45188622-45188354 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 11, 72 |
| Conread position: | 720-862 |
| Cow position: | chr10:56451721-56451578 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 720-863 |
| Cow position: | chr10:48883429-48883286 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 133 |
| Conread position: | 720-864 |
| Cow position: | chr10:3327328-3327187 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 720-864 |
| Cow position: | chr10:49931056-49931200 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 115, 92 |
| Conread position: | 720-874 |
| Cow position: | chr10:39265581-39265425 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 741-862 |
| Cow position: | chr10:39837797-39837918 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 741-864 |
| Cow position: | chr10:53204097-53203978 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 743-864 |
| Cow position: | chr10:43163829-43163950 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 52 |
| Conread position: | 358-647 |
| Cow position: | chr11:77267651-77267951 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 7, 55 |
| Conread position: | 364-719 |
| Cow position: | chr11:56649460-56649117 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 37, 47 |
| Conread position: | 365-715 |
| Cow position: | chr11:23478346-23477992 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 367-704 |
| Cow position: | chr11:23730915-23730567 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 368-647 |
| Cow position: | chr11:70692630-70692914 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 378-707 |
| Cow position: | chr11:5909899-5910216 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 301, 21 |
| Conread position: | 390-715 |
| Cow position: | chr11:21614981-21614647 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 406-688 |
| Cow position: | chr11:31726170-31726456 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 93 |
| Conread position: | 427-718 |
| Cow position: | chr11:37394622-37394331 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 70 |
| Conread position: | 443-717 |
| Cow position: | chr11:12054659-12054389 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 51, 106 |
| Conread position: | 719-864 |
| Cow position: | chr11:44884148-44884000 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 103 |
| Conread position: | 720-862 |
| Cow position: | chr11:9714359-9714502 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-864 |
| Cow position: | chr11:13887562-13887708 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 720-864 |
| Cow position: | chr11:40643159-40643014 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 720-864 |
| Cow position: | chr11:65682731-65682586 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 720-864 |
| Cow position: | chr11:71013253-71013110 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 720-864 |
| Cow position: | chr11:84742434-84742295 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-871 |
| Cow position: | chr11:40492056-40491904 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 720-876 |
| Cow position: | chr11:29622811-29622966 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 720-877 |
| Cow position: | chr11:12006230-12006070 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 721-864 |
| Cow position: | chr11:85680124-85679980 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 721-876 |
| Cow position: | chr11:25135577-25135419 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 724-871 |
| Cow position: | chr11:68276559-68276411 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 733-855 |
| Cow position: | chr11:34572281-34572403 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 738-864 |
| Cow position: | chr11:35240692-35240566 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 741-864 |
| Cow position: | chr11:74193338-74193460 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 719-864 |
| Cow position: | chr12:45121178-45121029 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 27, 5 |
| Conread position: | 720-863 |
| Cow position: | chr12:45476239-45476378 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 720-864 |
| Cow position: | chr12:20433089-20433233 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 720-864 |
| Cow position: | chr12:25380409-25380552 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 26 |
| Conread position: | 724-860 |
| Cow position: | chr12:10791850-10791713 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 98 |
| Conread position: | 724-864 |
| Cow position: | chr12:5480066-5480210 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 733-877 |
| Cow position: | chr12:1238996-1239139 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 140, 5 |
| Conread position: | 744-864 |
| Cow position: | chr12:41088614-41088732 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 368-483 |
| Cow position: | chr13:38932202-38932314 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 374-647 |
| Cow position: | chr13:37810127-37810388 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 129, 9 |
| Conread position: | 378-726 |
| Cow position: | chr13:29517142-29516801 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 720-862 |
| Cow position: | chr13:35766639-35766499 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 122 |
| Conread position: | 720-863 |
| Cow position: | chr13:35897812-35897673 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 720-864 |
| Cow position: | chr13:13289345-13289490 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 720-864 |
| Cow position: | chr13:22569002-22569147 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 721-863 |
| Cow position: | chr13:29519584-29519448 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 724-850 |
| Cow position: | chr13:30930359-30930232 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 724-861 |
| Cow position: | chr13:5292294-5292432 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 724-864 |
| Cow position: | chr13:61081494-61081634 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 724-867 |
| Cow position: | chr13:55964575-55964433 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 120 |
| Conread position: | 729-862 |
| Cow position: | chr13:31656516-31656650 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 733-863 |
| Cow position: | chr13:31656693-31656823 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 733-865 |
| Cow position: | chr13:571478-571346 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 738-864 |
| Cow position: | chr13:6900318-6900444 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 361-719 |
| Cow position: | chr14:36171250-36170884 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 39, 5 |
| Conread position: | 462-683 |
| Cow position: | chr14:31966554-31966784 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 161 |
| Conread position: | 544-719 |
| Cow position: | chr14:25958425-25958596 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 132, 14 |
| Conread position: | 720-859 |
| Cow position: | chr14:17921054-17921192 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 720-862 |
| Cow position: | chr14:39341344-39341202 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 720-863 |
| Cow position: | chr14:14114854-14114711 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 720-864 |
| Cow position: | chr14:22657599-22657455 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 720-864 |
| Cow position: | chr14:24966099-24966242 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 720-864 |
| Cow position: | chr14:41981819-41981674 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 720-864 |
| Cow position: | chr14:47869194-47869342 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 720-877 |
| Cow position: | chr14:33281000-33281159 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 720-877 |
| Cow position: | chr14:35322694-35322542 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 720-888 |
| Cow position: | chr14:40252882-40253051 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 724-863 |
| Cow position: | chr14:33962811-33962950 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 738-863 |
| Cow position: | chr14:48274051-48273927 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 741-871 |
| Cow position: | chr14:15521998-15521868 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 368-719 |
| Cow position: | chr15:21296771-21296415 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 372-648 |
| Cow position: | chr15:33644740-33645023 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 719-864 |
| Cow position: | chr15:43640786-43640642 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 720-850 |
| Cow position: | chr15:3913824-3913694 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 115 |
| Conread position: | 720-850 |
| Cow position: | chr15:41148549-41148418 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 720-864 |
| Cow position: | chr15:9390675-9390529 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-864 |
| Cow position: | chr15:47364081-47363936 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 724-864 |
| Cow position: | chr15:7311750-7311611 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 724-864 |
| Cow position: | chr15:13135038-13135179 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 724-864 |
| Cow position: | chr15:48288372-48288232 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 724-871 |
| Cow position: | chr15:25660697-25660845 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 738-864 |
| Cow position: | chr15:28038241-28038368 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 738-867 |
| Cow position: | chr15:13536719-13536847 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 352-718 |
| Cow position: | chr16:42145608-42145244 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 374-649 |
| Cow position: | chr16:42609311-42609039 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 411-714 |
| Cow position: | chr16:9444268-9444585 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 713-863 |
| Cow position: | chr16:31618989-31619140 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 719-865 |
| Cow position: | chr16:42695584-42695729 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 720-863 |
| Cow position: | chr16:30582180-30582325 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-864 |
| Cow position: | chr16:25595420-25595565 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 724-863 |
| Cow position: | chr16:34310876-34310736 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 724-864 |
| Cow position: | chr16:41654728-41654868 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 724-864 |
| Cow position: | chr16:46527731-46527874 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 726-863 |
| Cow position: | chr16:30695366-30695505 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 726-864 |
| Cow position: | chr16:50036539-50036399 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 741-864 |
| Cow position: | chr16:20125047-20124924 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 89 |
| Conread position: | 371-546 |
| Cow position: | chr17:7668792-7668619 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 438-684 |
| Cow position: | chr17:18589318-18589066 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 64, 161 |
| Conread position: | 719-864 |
| Cow position: | chr17:8039126-8038981 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 108 |
| Conread position: | 720-864 |
| Cow position: | chr17:30752562-30752416 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-876 |
| Cow position: | chr17:24309943-24309782 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 721-883 |
| Cow position: | chr17:18898668-18898830 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 25, 140 |
| Conread position: | 722-864 |
| Cow position: | chr17:44330980-44330838 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 24, 6 |
| Conread position: | 724-864 |
| Cow position: | chr17:18851575-18851436 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 87 |
| Conread position: | 725-860 |
| Cow position: | chr17:23278172-23278302 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 729-855 |
| Cow position: | chr17:12631153-12631280 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 741-864 |
| Cow position: | chr17:18840649-18840771 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 347-726 |
| Cow position: | chr18:55029010-55029389 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 268 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 13, 56 |
| Conread position: | 402-652 |
| Cow position: | chr18:36778513-36778267 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 84, 124 |
| Conread position: | 719-851 |
| Cow position: | chr18:3832404-3832271 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-861 |
| Cow position: | chr18:42757355-42757218 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 720-862 |
| Cow position: | chr18:14153140-14152996 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-862 |
| Cow position: | chr18:51031751-51031894 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 14 |
| Conread position: | 720-864 |
| Cow position: | chr18:35878044-35878186 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 28 |
| Conread position: | 720-864 |
| Cow position: | chr18:36414596-36414451 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 720-876 |
| Cow position: | chr18:36785295-36785137 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 724-863 |
| Cow position: | chr18:6424672-6424813 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 724-864 |
| Cow position: | chr18:8287628-8287766 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 716-864 |
| Cow position: | chr19:20647405-20647257 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 719-850 |
| Cow position: | chr19:29145971-29145840 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 719-863 |
| Cow position: | chr19:36263489-36263634 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 720-863 |
| Cow position: | chr19:15096949-15096806 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 720-864 |
| Cow position: | chr19:8245789-8245934 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-864 |
| Cow position: | chr19:17804857-17804712 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 720-864 |
| Cow position: | chr19:35538738-35538883 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-868 |
| Cow position: | chr19:17749139-17748989 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 724-864 |
| Cow position: | chr19:9114744-9114885 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 391-719 |
| Cow position: | chr20:35156453-35156131 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 14 |
| Conread position: | 724-864 |
| Cow position: | chr20:8654082-8653941 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 724-877 |
| Cow position: | chr20:14032333-14032487 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 734-864 |
| Cow position: | chr20:23097909-23097778 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 36 |
| Conread position: | 369-635 |
| Cow position: | chr21:9321832-9322105 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 136, 29 |
| Conread position: | 412-687 |
| Cow position: | chr21:33810948-33810667 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 163 |
| Conread position: | 416-659 |
| Cow position: | chr21:30315815-30315570 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 87, 165 |
| Conread position: | 719-862 |
| Cow position: | chr21:33653523-33653381 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 720-864 |
| Cow position: | chr21:9988094-9988238 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 26, 121 |
| Conread position: | 720-864 |
| Cow position: | chr21:37613697-37613552 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 721-862 |
| Cow position: | chr21:34174541-34174682 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 133 |
| Conread position: | 724-862 |
| Cow position: | chr21:10093850-10093715 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 30 |
| Conread position: | 724-870 |
| Cow position: | chr21:17031460-17031602 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 27 |
| Conread position: | 740-862 |
| Cow position: | chr21:3140681-3140803 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 741-855 |
| Cow position: | chr21:47663149-47663036 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 54 |
| Conread position: | 347-649 |
| Cow position: | chr22:4244214-4244506 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 10, 58 |
| Conread position: | 359-639 |
| Cow position: | chr22:13658216-13658487 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 24 |
| Conread position: | 365-718 |
| Cow position: | chr22:44094939-44095296 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 51 |
| Conread position: | 370-527 |
| Cow position: | chr22:42815355-42815197 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 41 |
| Conread position: | 724-871 |
| Cow position: | chr22:12446281-12446135 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 124 |
| Conread position: | 724-871 |
| Cow position: | chr22:12595381-12595236 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 726-871 |
| Cow position: | chr22:38317001-38317145 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 738-863 |
| Cow position: | chr22:42840794-42840918 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 738-864 |
| Cow position: | chr22:37382713-37382588 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 741-885 |
| Cow position: | chr22:5038434-5038290 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 119, 53 |
| Conread position: | 378-648 |
| Cow position: | chr23:8036654-8036381 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 127, 13 |
| Conread position: | 390-653 |
| Cow position: | chr23:29831429-29831694 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 717-859 |
| Cow position: | chr23:9387266-9387409 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 719-863 |
| Cow position: | chr23:11764921-11764779 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 720-863 |
| Cow position: | chr23:29005565-29005704 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 115 |
| Conread position: | 720-864 |
| Cow position: | chr23:13819892-13820037 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 724-836 |
| Cow position: | chr23:31384898-31385011 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 724-862 |
| Cow position: | chr23:13540168-13540029 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 724-864 |
| Cow position: | chr23:27628231-27628088 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 724-864 |
| Cow position: | chr23:38236301-38236440 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 726-851 |
| Cow position: | chr23:13478561-13478686 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 116 |
| Conread position: | 729-863 |
| Cow position: | chr23:17369749-17369616 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 741-871 |
| Cow position: | chr23:26405562-26405432 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 314-718 |
| Cow position: | chr24:7881758-7881355 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 347-726 |
| Cow position: | chr24:11939548-11939937 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 364-633 |
| Cow position: | chr24:17404349-17404076 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 80, 32 |
| Conread position: | 364-718 |
| Cow position: | chr24:5889050-5889420 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 102, 35 |
| Conread position: | 378-633 |
| Cow position: | chr24:39449724-39449980 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 719-864 |
| Cow position: | chr24:14180437-14180581 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 720-860 |
| Cow position: | chr24:11957046-11957187 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 720-864 |
| Cow position: | chr24:30556991-30557137 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 720-865 |
| Cow position: | chr24:41240355-41240214 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 720-871 |
| Cow position: | chr24:6223156-6223004 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 720-871 |
| Cow position: | chr24:11937286-11937437 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 721-863 |
| Cow position: | chr24:31185603-31185460 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 726-871 |
| Cow position: | chr24:10574853-10574997 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 741-863 |
| Cow position: | chr24:20120448-20120570 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 751-863 |
| Cow position: | chr24:854227-854339 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 720-863 |
| Cow position: | chr25:11635137-11634993 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-873 |
| Cow position: | chr25:33205947-33206101 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 724-864 |
| Cow position: | chr25:36096768-36096627 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 743-864 |
| Cow position: | chr25:14506439-14506560 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 378-539 |
| Cow position: | chr26:16857849-16858007 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 116, 19 |
| Conread position: | 720-860 |
| Cow position: | chr26:17734595-17734454 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-862 |
| Cow position: | chr26:450115-449972 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 720-863 |
| Cow position: | chr26:19562154-19562010 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-863 |
| Cow position: | chr26:32982721-32982864 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 720-864 |
| Cow position: | chr26:19880035-19879891 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 102 |
| Conread position: | 720-864 |
| Cow position: | chr26:24997485-24997632 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 724-864 |
| Cow position: | chr26:33478959-33479101 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 739-871 |
| Cow position: | chr26:15913802-15913670 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 712-863 |
| Cow position: | chr27:1577284-1577132 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 719-859 |
| Cow position: | chr27:16610439-16610579 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 83 |
| Conread position: | 719-874 |
| Cow position: | chr27:11752676-11752832 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 720-861 |
| Cow position: | chr27:23574445-23574588 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 720-863 |
| Cow position: | chr27:5830241-5830382 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 49 |
| Conread position: | 720-871 |
| Cow position: | chr27:13926308-13926156 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 741-864 |
| Cow position: | chr27:12018478-12018601 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 363-719 |
| Cow position: | chr28:13088819-13088457 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 37, 8 |
| Conread position: | 717-862 |
| Cow position: | chr28:24015506-24015360 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 719-864 |
| Cow position: | chr28:12694639-12694494 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 102 |
| Conread position: | 720-864 |
| Cow position: | chr28:17169212-17169354 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 720-871 |
| Cow position: | chr28:28599105-28598953 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 724-864 |
| Cow position: | chr28:7139088-7139228 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 724-864 |
| Cow position: | chr28:27723831-27723691 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 115 |
| Conread position: | 724-865 |
| Cow position: | chr28:4114622-4114766 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 724-875 |
| Cow position: | chr28:24637672-24637819 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 142, 15 |
| Conread position: | 729-864 |
| Cow position: | chr28:17196897-17197027 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 359-718 |
| Cow position: | chr29:24156746-24156381 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 364-719 |
| Cow position: | chr29:32982781-32982412 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 36, 46 |
| Conread position: | 719-863 |
| Cow position: | chr29:5053509-5053653 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 125 |
| Conread position: | 720-857 |
| Cow position: | chr29:1994704-1994573 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 721-871 |
| Cow position: | chr29:34287379-34287528 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 25, 55 |
| Conread position: | 724-863 |
| Cow position: | chr29:25117334-25117473 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 725-864 |
| Cow position: | chr29:33101909-33101767 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 731-864 |
| Cow position: | chr29:6437825-6437691 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 741-864 |
| Cow position: | chr29:23000942-23001063 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 746-864 |
| Cow position: | chr29:21205379-21205260 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 368-709 |
| Cow position: | chr4:33172880-33172531 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 391-715 |
| Cow position: | chr4:42548347-42548027 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 398-547 |
| Cow position: | chr4:14197646-14197500 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 420-718 |
| Cow position: | chr4:8955432-8955135 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 70, 128 |
| Conread position: | 719-864 |
| Cow position: | chr4:19451286-19451433 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 720-860 |
| Cow position: | chr4:43066123-43065988 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 720-863 |
| Cow position: | chr4:39222686-39222543 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 720-863 |
| Cow position: | chr4:44379991-44380133 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 720-864 |
| Cow position: | chr4:16246365-16246511 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-864 |
| Cow position: | chr4:26223101-26223245 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 106, 45 |
| Conread position: | 724-863 |
| Cow position: | chr4:34007948-34008084 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 724-864 |
| Cow position: | chr4:65142357-65142502 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 724-869 |
| Cow position: | chr4:61080849-61080704 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 141 |
| Conread position: | 741-858 |
| Cow position: | chr4:28286932-28286815 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 741-864 |
| Cow position: | chr4:35039186-35039308 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 762-863 |
| Cow position: | chr4:46192129-46192028 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-719 |
| Cow position: | chr5:29867536-29867163 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 347-726 |
| Cow position: | chr5:62360694-62360305 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 719-836 |
| Cow position: | chr5:49070111-49070229 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 719-864 |
| Cow position: | chr5:62362908-62362762 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 720-860 |
| Cow position: | chr5:30793524-30793383 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-863 |
| Cow position: | chr5:47593528-47593671 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 720-877 |
| Cow position: | chr5:68165942-68166104 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 720-889 |
| Cow position: | chr5:9953665-9953831 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 721-871 |
| Cow position: | chr5:5393798-5393648 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 724-862 |
| Cow position: | chr5:37714913-37715051 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 30 |
| Conread position: | 739-860 |
| Cow position: | chr5:73252725-73252847 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 741-861 |
| Cow position: | chr5:73141377-73141499 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 753-864 |
| Cow position: | chr5:26893958-26894070 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 358-719 |
| Cow position: | chr6:6033462-6033095 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 359-703 |
| Cow position: | chr6:3360044-3360386 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 6, 54 |
| Conread position: | 364-718 |
| Cow position: | chr6:17424325-17423976 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 365-715 |
| Cow position: | chr6:65382411-65382067 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 140, 35 |
| Conread position: | 378-695 |
| Cow position: | chr6:64816842-64817144 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 127, 21 |
| Conread position: | 421-719 |
| Cow position: | chr6:59330390-59330697 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 86, 237 |
| Conread position: | 719-864 |
| Cow position: | chr6:36826457-36826312 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 125 |
| Conread position: | 720-864 |
| Cow position: | chr6:48473523-48473377 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 720-874 |
| Cow position: | chr6:14165014-14165167 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 146, 74 |
| Conread position: | 721-871 |
| Cow position: | chr6:48669430-48669581 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 724-864 |
| Cow position: | chr6:38981775-38981915 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 108, 22 |
| Conread position: | 724-864 |
| Cow position: | chr6:53380959-53380823 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 725-864 |
| Cow position: | chr6:47527113-47526974 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 731-864 |
| Cow position: | chr6:49721255-49721121 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 100, 7 |
| Conread position: | 738-860 |
| Cow position: | chr6:23008376-23008498 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 741-862 |
| Cow position: | chr6:23811379-23811258 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 745-871 |
| Cow position: | chr6:3515814-3515688 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 752-876 |
| Cow position: | chr6:42253071-42252945 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 376-718 |
| Cow position: | chr7:52528-52164 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 408-719 |
| Cow position: | chr7:28029504-28029818 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 11, 210 |
| Conread position: | 719-863 |
| Cow position: | chr7:11908225-11908080 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 720-864 |
| Cow position: | chr7:25015656-25015800 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 720-864 |
| Cow position: | chr7:25024363-25024507 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 720-866 |
| Cow position: | chr7:43303133-43302988 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 720-876 |
| Cow position: | chr7:21875719-21875874 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 68, 42 |
| Conread position: | 724-863 |
| Cow position: | chr7:8605455-8605316 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 724-871 |
| Cow position: | chr7:59086797-59086651 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 429-683 |
| Cow position: | chr8:23392568-23392821 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 55 |
| Conread position: | 487-719 |
| Cow position: | chr8:14065703-14065921 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 718-864 |
| Cow position: | chr8:39636068-39635919 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 719-864 |
| Cow position: | chr8:36709529-36709673 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 720-862 |
| Cow position: | chr8:6820753-6820892 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 720-863 |
| Cow position: | chr8:4494004-4494148 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-864 |
| Cow position: | chr8:10346880-10347025 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 721-863 |
| Cow position: | chr8:47274834-47274977 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 721-864 |
| Cow position: | chr8:42000180-42000323 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 115 |
| Conread position: | 721-864 |
| Cow position: | chr8:45072723-45072578 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 724-850 |
| Cow position: | chr8:58635725-58635852 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 724-863 |
| Cow position: | chr8:5389935-5390075 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 724-864 |
| Cow position: | chr8:34378947-34378809 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 724-864 |
| Cow position: | chr8:54170439-54170579 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 724-865 |
| Cow position: | chr8:61576706-61576842 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 79 |
| Conread position: | 725-864 |
| Cow position: | chr8:24671260-24671400 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 13, 127 |
| Conread position: | 725-864 |
| Cow position: | chr8:40272768-40272909 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 732-876 |
| Cow position: | chr8:39619804-39619661 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 738-876 |
| Cow position: | chr8:39461715-39461578 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 741-864 |
| Cow position: | chr8:31624996-31624873 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-725 |
| Cow position: | chr9:63077046-63077429 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 56, 43 |
| Conread position: | 364-605 |
| Cow position: | chr9:30904069-30904306 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 139, 32 |
| Conread position: | 371-718 |
| Cow position: | chr9:30473763-30473407 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 720-863 |
| Cow position: | chr9:6357893-6358036 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 720-863 |
| Cow position: | chr9:27072571-27072715 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 720-864 |
| Cow position: | chr9:7413970-7413825 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-864 |
| Cow position: | chr9:57815769-57815623 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 720-871 |
| Cow position: | chr9:29373397-29373247 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 720-871 |
| Cow position: | chr9:30881462-30881314 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 721-871 |
| Cow position: | chr9:11814191-11814337 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 741-864 |
| Cow position: | chr9:49636376-49636249 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 368-718 |
| Cow position: | chrX:23329435-23329780 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 378-719 |
| Cow position: | chrX:12062312-12061960 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 386-597 |
| Cow position: | chrX:1068268-1068050 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 720-861 |
| Cow position: | chrX:15308316-15308458 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 720-863 |
| Cow position: | chrX:10409401-10409544 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 720-864 |
| Cow position: | chrX:15574205-15574344 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 720-864 |
| Cow position: | chrX:28855183-28855038 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 720-871 |
| Cow position: | chrX:41114884-41114733 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 146 |
| Conread position: | 720-877 |
| Cow position: | chrX:16530608-16530450 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 724-861 |
| Cow position: | chrX:4566248-4566384 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 7 |
| Conread position: | 724-862 |
| Cow position: | chrX:31981945-31982084 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 724-864 |
| Cow position: | chrX:7393992-7394133 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 724-864 |
| Cow position: | chrX:11509749-11509608 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 724-864 |
| Cow position: | chrX:12852014-12852155 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 724-864 |
| Cow position: | chrX:42294784-42294643 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 725-864 |
| Cow position: | chrX:9235335-9235198 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 725-864 |
| Cow position: | chrX:12092350-12092486 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 726-862 |
| Cow position: | chrX:6026033-6026169 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 730-864 |
| Cow position: | chrX:17522542-17522675 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 123 |
| Conread position: | 733-857 |
| Cow position: | chrX:23325666-23325789 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 738-859 |
| Cow position: | chrX:21973605-21973484 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 741-863 |
| Cow position: | chrX:18152593-18152715 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 748-871 |
| Cow position: | chrX:31342856-31342733 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |