Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Lym1-jns06_G12.r.3
        

               Conread position:
               15-221
               

               Cow position:
               chr1:158996-159206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               18-212
               

               Cow position:
               chr1:83930067-83930261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               53, 99
               

               Conread position:
               18-213
               

               Cow position:
               chr1:8107988-8107794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 6
               

               Conread position:
               18-213
               

               Cow position:
               chr1:57285888-57286078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               18-213
               

               Cow position:
               chr1:97554788-97554981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               153, 132
               

               Conread position:
               18-216
               

               Cow position:
               chr1:8625192-8625388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               18-216
               

               Cow position:
               chr1:30217300-30217498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 89
               

               Conread position:
               18-221
               

               Cow position:
               chr1:57975911-57975714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 25
               

               Conread position:
               18-221
               

               Cow position:
               chr1:67547657-67547859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               18-223
               

               Cow position:
               chr1:36001602-36001408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 10
               

               Conread position:
               18-225
               

               Cow position:
               chr1:71070892-71070684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 38
               

               Conread position:
               19-177
               

               Cow position:
               chr1:15417306-15417464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 88
               

               Conread position:
               21-223
               

               Cow position:
               chr1:40709818-40709625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               21-226
               

               Cow position:
               chr1:64723469-64723266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               24-220
               

               Cow position:
               chr1:3446807-3446997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 54
               

               Conread position:
               28-187
               

               Cow position:
               chr1:81472414-81472579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               43, 58
               

               Conread position:
               1-1404
               

               Cow position:
               chr10:52374426-52375794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1422
               

               Alignm identity:
               1164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               367, 64
               

               Conread position:
               4-217
               

               Cow position:
               chr10:17890704-17890490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               9-225
               

               Cow position:
               chr10:49181003-49181218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 9
               

               Conread position:
               18-214
               

               Cow position:
               chr10:8178220-8178413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               52, 69
               

               Conread position:
               18-216
               

               Cow position:
               chr10:23540930-23540735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               18-216
               

               Cow position:
               chr10:69882183-69881987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 40
               

               Conread position:
               18-222
               

               Cow position:
               chr10:35908736-35908534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 69
               

               Conread position:
               18-222
               

               Cow position:
               chr10:67965016-67964812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               59, 180
               

               Conread position:
               18-225
               

               Cow position:
               chr10:25236933-25237135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 141
               

               Conread position:
               19-177
               

               Cow position:
               chr10:65167943-65167788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               20-221
               

               Cow position:
               chr10:50206107-50206307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               21-221
               

               Cow position:
               chr10:1941226-1941023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               22-216
               

               Cow position:
               chr10:19454568-19454377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               22-505
               

               Cow position:
               chr10:60748289-60747808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               107, 46
               

               Conread position:
               31-221
               

               Cow position:
               chr10:25691845-25692034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               50-231
               

               Cow position:
               chr10:67556554-67556737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               4-213
               

               Cow position:
               chr11:75491122-75490915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               4-221
               

               Cow position:
               chr11:50586265-50586047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               9, 135
               

               Conread position:
               13-213
               

               Cow position:
               chr11:29524808-29524608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               59, 113
               

               Conread position:
               16-213
               

               Cow position:
               chr11:18944716-18944518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               18-202
               

               Cow position:
               chr11:40629476-40629296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               18-210
               

               Cow position:
               chr11:15619074-15619258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               119, 56
               

               Conread position:
               18-216
               

               Cow position:
               chr11:23274503-23274315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               59, 53
               

               Conread position:
               18-216
               

               Cow position:
               chr11:62583801-62583607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               18-221
               

               Cow position:
               chr11:8537513-8537307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               18-223
               

               Cow position:
               chr11:64903024-64903227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               54, 15
               

               Conread position:
               18-226
               

               Cow position:
               chr11:81343879-81343674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               18-228
               

               Cow position:
               chr11:1961760-1961552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               18-235
               

               Cow position:
               chr11:54301819-54302044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               38, 77
               

               Conread position:
               18-236
               

               Cow position:
               chr11:9257247-9257017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 223
               

               Conread position:
               18-239
               

               Cow position:
               chr11:63435933-63436161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               18-256
               

               Cow position:
               chr11:53331863-53332104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               19-211
               

               Cow position:
               chr11:59960738-59960548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               19-221
               

               Cow position:
               chr11:57765991-57765790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 61
               

               Conread position:
               19-221
               

               Cow position:
               chr11:75610731-75610533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 132
               

               Conread position:
               20-133
               

               Cow position:
               chr11:22349205-22349091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               22-237
               

               Cow position:
               chr11:40331018-40331232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               50, 113
               

               Conread position:
               36-203
               

               Cow position:
               chr11:52242825-52242657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 140
               

               Conread position:
               37-223
               

               Cow position:
               chr11:69479615-69479428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               35, 113
               

               Conread position:
               42-206
               

               Cow position:
               chr11:52210976-52210812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 80
               

               Conread position:
               43-213
               

               Cow position:
               chr11:50463425-50463260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 105
               

               Conread position:
               18-217
               

               Cow position:
               chr12:12155092-12155295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               18-221
               

               Cow position:
               chr12:30431924-30431714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               18-230
               

               Cow position:
               chr12:31743176-31742973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 55
               

               Conread position:
               18-234
               

               Cow position:
               chr12:21879779-21879574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 101
               

               Conread position:
               19-189
               

               Cow position:
               chr12:22950394-22950223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               19-208
               

               Cow position:
               chr12:30917366-30917553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 124
               

               Conread position:
               19-213
               

               Cow position:
               chr12:8732234-8732037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               22-243
               

               Cow position:
               chr12:8851469-8851690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               201, 218
               

               Conread position:
               24-212
               

               Cow position:
               chr12:39759558-39759740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               31-217
               

               Cow position:
               chr12:39468383-39468199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               34-250
               

               Cow position:
               chr12:39149293-39149075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               38-178
               

               Cow position:
               chr12:27859891-27859751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               34, 126
               

               Conread position:
               18-167
               

               Cow position:
               chr13:45919262-45919112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               18-188
               

               Cow position:
               chr13:42849442-42849613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               54, 123
               

               Conread position:
               18-209
               

               Cow position:
               chr13:15527425-15527232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               54, 165
               

               Conread position:
               18-213
               

               Cow position:
               chr13:39848056-39847864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               53, 22
               

               Conread position:
               18-216
               

               Cow position:
               chr13:19474376-19474182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               18-216
               

               Cow position:
               chr13:39609692-39609887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               18-221
               

               Cow position:
               chr13:40622619-40622416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               54, 186
               

               Conread position:
               18-227
               

               Cow position:
               chr13:34570020-34570231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               20-225
               

               Cow position:
               chr13:21018960-21018760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               26-221
               

               Cow position:
               chr13:43612248-43612051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               28-223
               

               Cow position:
               chr13:19026312-19026116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 147
               

               Conread position:
               30-220
               

               Cow position:
               chr13:44210156-44210349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               42, 116
               

               Conread position:
               38-213
               

               Cow position:
               chr13:49384967-49385142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               34, 145
               

               Conread position:
               13-217
               

               Cow position:
               chr14:26144153-26144357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               14-222
               

               Cow position:
               chr14:6610969-6611170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               15-216
               

               Cow position:
               chr14:13259101-13259303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               18-195
               

               Cow position:
               chr14:4159423-4159243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               18-196
               

               Cow position:
               chr14:28199870-28199690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               18-199
               

               Cow position:
               chr14:14485352-14485534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               18-204
               

               Cow position:
               chr14:43569133-43568943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               54, 127
               

               Conread position:
               18-207
               

               Cow position:
               chr14:12227956-12228146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 122
               

               Conread position:
               18-216
               

               Cow position:
               chr14:23211977-23211778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 89
               

               Conread position:
               18-216
               

               Cow position:
               chr14:42695316-42695121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               52, 152
               

               Conread position:
               19-234
               

               Cow position:
               chr14:40779926-40780139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               21-216
               

               Cow position:
               chr14:42246599-42246402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               51, 129
               

               Conread position:
               15-234
               

               Cow position:
               chr15:27974089-27974307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               199, 31
               

               Conread position:
               18-197
               

               Cow position:
               chr15:36743761-36743581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               18-216
               

               Cow position:
               chr15:11928229-11928427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               53, 96
               

               Conread position:
               18-221
               

               Cow position:
               chr15:19560275-19560473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 122
               

               Conread position:
               18-221
               

               Cow position:
               chr15:47980419-47980223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               49, 137
               

               Conread position:
               19-234
               

               Cow position:
               chr15:8569912-8569700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               155, 48
               

               Conread position:
               20-207
               

               Cow position:
               chr15:12404761-12404949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               25-221
               

               Cow position:
               chr15:4637200-4637395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 104
               

               Conread position:
               25-225
               

               Cow position:
               chr15:14121429-14121629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               44, 120
               

               Conread position:
               72-254
               

               Cow position:
               chr15:14632160-14632340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               89, 7
               

               Conread position:
               8-223
               

               Cow position:
               chr16:14740952-14740740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 110
               

               Conread position:
               15-216
               

               Cow position:
               chr16:46652877-46652676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               177, 30
               

               Conread position:
               18-206
               

               Cow position:
               chr16:51618708-51618516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               52, 149
               

               Conread position:
               18-216
               

               Cow position:
               chr16:11952060-11952256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               52, 146
               

               Conread position:
               18-221
               

               Cow position:
               chr16:36286117-36286315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               19-170
               

               Cow position:
               chr16:32882119-32882270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               54, 145
               

               Conread position:
               19-220
               

               Cow position:
               chr16:20640372-20640171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               37, 64
               

               Conread position:
               22-216
               

               Cow position:
               chr16:30821037-30820844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               25-221
               

               Cow position:
               chr16:30709170-30709369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               40-221
               

               Cow position:
               chr16:13562524-13562346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               47-209
               

               Cow position:
               chr16:34281883-34282045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               25, 117
               

               Conread position:
               71-221
               

               Cow position:
               chr16:53428711-53428561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-188
               

               Cow position:
               chr17:30332940-30332769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               54, 158
               

               Conread position:
               18-208
               

               Cow position:
               chr17:31719995-31720183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               54, 71
               

               Conread position:
               18-209
               

               Cow position:
               chr17:17353605-17353417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               18-210
               

               Cow position:
               chr17:5314813-5315003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               155, 28
               

               Conread position:
               18-217
               

               Cow position:
               chr17:36947244-36947444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               143, 54
               

               Conread position:
               18-221
               

               Cow position:
               chr17:15681836-15682045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 119
               

               Conread position:
               18-227
               

               Cow position:
               chr17:24231371-24231162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 69
               

               Conread position:
               21-211
               

               Cow position:
               chr17:7567777-7567582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               21-221
               

               Cow position:
               chr17:38961389-38961188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               23-221
               

               Cow position:
               chr17:10595088-10595287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               26-217
               

               Cow position:
               chr17:9735364-9735557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               37-216
               

               Cow position:
               chr17:26286159-26286337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 148
               

               Conread position:
               42-222
               

               Cow position:
               chr17:19224769-19224586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               30, 125
               

               Conread position:
               59-220
               

               Cow position:
               chr17:16674764-16674924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               59-222
               

               Cow position:
               chr17:44003631-44003471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               12-216
               

               Cow position:
               chr18:5909539-5909335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               60, 131
               

               Conread position:
               16-225
               

               Cow position:
               chr18:51623279-51623488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 127
               

               Conread position:
               18-146
               

               Cow position:
               chr18:2312128-2311999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               18-165
               

               Cow position:
               chr18:8166782-8166930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               18-192
               

               Cow position:
               chr18:27591503-27591328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               18-206
               

               Cow position:
               chr18:47733354-47733165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 80
               

               Conread position:
               18-206
               

               Cow position:
               chr18:47754275-47754086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               54, 80
               

               Conread position:
               18-206
               

               Cow position:
               chr18:47774965-47774776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               54, 80
               

               Conread position:
               18-212
               

               Cow position:
               chr18:36654837-36654645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 31
               

               Conread position:
               18-216
               

               Cow position:
               chr18:42223548-42223359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               137, 45
               

               Conread position:
               18-221
               

               Cow position:
               chr18:9563564-9563361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 45
               

               Conread position:
               19-213
               

               Cow position:
               chr18:1137481-1137283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               92, 53
               

               Conread position:
               19-213
               

               Cow position:
               chr18:31117956-31117761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               23-216
               

               Cow position:
               chr18:40049642-40049451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 51
               

               Conread position:
               33-212
               

               Cow position:
               chr18:8523625-8523442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               59-221
               

               Cow position:
               chr18:18580896-18581060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               13, 132
               

               Conread position:
               16-177
               

               Cow position:
               chr19:29134641-29134799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               18-180
               

               Cow position:
               chr19:22666732-22666567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               18-188
               

               Cow position:
               chr19:36667734-36667905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               18-197
               

               Cow position:
               chr19:32520857-32521037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               18-222
               

               Cow position:
               chr19:28183793-28183598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 96
               

               Conread position:
               18-240
               

               Cow position:
               chr19:7745658-7745878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               19-234
               

               Cow position:
               chr19:43023406-43023613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               28, 80
               

               Conread position:
               21-210
               

               Cow position:
               chr19:13634505-13634682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 93
               

               Conread position:
               22-222
               

               Cow position:
               chr19:47046948-47046752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 41
               

               Conread position:
               23-243
               

               Cow position:
               chr19:5365978-5365757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               26-220
               

               Cow position:
               chr19:157618-157425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               11-187
               

               Cow position:
               chr2:14645134-14644958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               61, 160
               

               Conread position:
               14-225
               

               Cow position:
               chr2:71770644-71770430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               15-212
               

               Cow position:
               chr2:74556427-74556619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               59, 81
               

               Conread position:
               18-145
               

               Cow position:
               chr2:27167508-27167381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               18-189
               

               Cow position:
               chr2:52844482-52844311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               54, 115
               

               Conread position:
               18-208
               

               Cow position:
               chr2:25251926-25252117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               18-213
               

               Cow position:
               chr2:26518561-26518748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 10
               

               Conread position:
               18-215
               

               Cow position:
               chr2:47627641-47627844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               18-222
               

               Cow position:
               chr2:49453688-49453889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               139, 50
               

               Conread position:
               18-223
               

               Cow position:
               chr2:22715325-22715118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               18-223
               

               Cow position:
               chr2:39821806-39822007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               18-238
               

               Cow position:
               chr2:20277308-20277524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               56, 65
               

               Conread position:
               19-213
               

               Cow position:
               chr2:61862620-61862814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 151
               

               Conread position:
               19-219
               

               Cow position:
               chr2:16796709-16796512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               20-212
               

               Cow position:
               chr2:2387426-2387240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 83
               

               Conread position:
               20-212
               

               Cow position:
               chr2:22246757-22246950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               20-239
               

               Cow position:
               chr2:62491736-62491516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               50, 69
               

               Conread position:
               21-213
               

               Cow position:
               chr2:65923830-65923636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               23-221
               

               Cow position:
               chr2:42740964-42741162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               44, 40
               

               Conread position:
               33-224
               

               Cow position:
               chr2:80965994-80966185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               27, 96
               

               Conread position:
               64-239
               

               Cow position:
               chr2:29186178-29186000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               18-190
               

               Cow position:
               chr20:11946136-11946308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 116
               

               Conread position:
               18-203
               

               Cow position:
               chr20:41351936-41351750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               53, 121
               

               Conread position:
               18-221
               

               Cow position:
               chr20:14825381-14825587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               18-225
               

               Cow position:
               chr20:7612175-7612380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               19-207
               

               Cow position:
               chr20:28105388-28105573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 117
               

               Conread position:
               19-211
               

               Cow position:
               chr20:10566970-10567161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 131
               

               Conread position:
               19-216
               

               Cow position:
               chr20:34416776-34416580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               5, 62
               

               Conread position:
               19-225
               

               Cow position:
               chr20:33708869-33708662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               20-139
               

               Cow position:
               chr20:4988924-4989039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               59-221
               

               Cow position:
               chr20:2272502-2272664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 145
               

               Conread position:
               18-127
               

               Cow position:
               chr21:27553856-27553748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               18-161
               

               Cow position:
               chr21:6573039-6573182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               18-209
               

               Cow position:
               chr21:25332568-25332378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               54, 150
               

               Conread position:
               18-213
               

               Cow position:
               chr21:17616866-17616673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 69
               

               Conread position:
               18-216
               

               Cow position:
               chr21:2150737-2150537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               18-216
               

               Cow position:
               chr21:29004620-29004421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               51, 180
               

               Conread position:
               18-216
               

               Cow position:
               chr21:29469950-29470155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               18-216
               

               Cow position:
               chr21:35677128-35677322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               54, 67
               

               Conread position:
               18-216
               

               Cow position:
               chr21:47421556-47421749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 29
               

               Conread position:
               18-223
               

               Cow position:
               chr21:34760458-34760252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 32
               

               Conread position:
               18-225
               

               Cow position:
               chr21:49650672-49650472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 27
               

               Conread position:
               19-180
               

               Cow position:
               chr21:20156773-20156933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               20-220
               

               Cow position:
               chr21:29965231-29965032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 129
               

               Conread position:
               31-197
               

               Cow position:
               chr21:18809454-18809290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               36-202
               

               Cow position:
               chr21:41154817-41154982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 97
               

               Conread position:
               36-211
               

               Cow position:
               chr21:3414890-3415062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               151, 26
               

               Conread position:
               41-221
               

               Cow position:
               chr21:35083096-35082926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               17-206
               

               Cow position:
               chr22:45483957-45483766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               51, 73
               

               Conread position:
               18-181
               

               Cow position:
               chr22:18426741-18426906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               18-212
               

               Cow position:
               chr22:33756502-33756692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               18-213
               

               Cow position:
               chr22:18140231-18140428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 191
               

               Conread position:
               18-217
               

               Cow position:
               chr22:34680952-34680753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 16
               

               Conread position:
               31-226
               

               Cow position:
               chr22:44030617-44030817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               40-223
               

               Cow position:
               chr22:23765813-23765630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               32, 144
               

               Conread position:
               49-234
               

               Cow position:
               chr22:7870447-7870635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               14-223
               

               Cow position:
               chr23:13828777-13828566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               18-211
               

               Cow position:
               chr23:7932634-7932819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               18-213
               

               Cow position:
               chr23:41009656-41009460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               49, 63
               

               Conread position:
               18-214
               

               Cow position:
               chr23:37208237-37208434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               18-222
               

               Cow position:
               chr23:24548628-24548832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               52, 194
               

               Conread position:
               20-194
               

               Cow position:
               chr23:16278007-16277837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               21-221
               

               Cow position:
               chr23:36391789-36391590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               55, 27
               

               Conread position:
               26-227
               

               Cow position:
               chr23:35710258-35710065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               51-221
               

               Cow position:
               chr23:9467994-9467823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               3-221
               

               Cow position:
               chr24:31123057-31122846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               12-206
               

               Cow position:
               chr24:31496335-31496522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               18-201
               

               Cow position:
               chr24:3647070-3646889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               18-216
               

               Cow position:
               chr24:2255616-2255812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               51, 149
               

               Conread position:
               18-216
               

               Cow position:
               chr24:30212841-30213035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               48, 17
               

               Conread position:
               18-221
               

               Cow position:
               chr24:28913503-28913299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               19-200
               

               Cow position:
               chr24:16178920-16179101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               26-216
               

               Cow position:
               chr24:24480924-24480740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 88
               

               Conread position:
               32-230
               

               Cow position:
               chr24:24540849-24541045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               40, 54
               

               Conread position:
               18-174
               

               Cow position:
               chr25:27493082-27492926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               18-188
               

               Cow position:
               chr25:14024845-14025019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               30, 119
               

               Conread position:
               18-197
               

               Cow position:
               chr25:25564882-25564701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               18-210
               

               Cow position:
               chr25:35772912-35773094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               190, 49
               

               Conread position:
               21-290
               

               Cow position:
               chr25:13436723-13436993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               33-234
               

               Cow position:
               chr25:12071583-12071779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               36-207
               

               Cow position:
               chr25:27811327-27811155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               39-224
               

               Cow position:
               chr25:4020786-4020607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 9
               

               Conread position:
               1-226
               

               Cow position:
               chr26:21435848-21436074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               26, 185
               

               Conread position:
               18-209
               

               Cow position:
               chr26:17612850-17613043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               18-210
               

               Cow position:
               chr26:16421174-16421368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               54, 190
               

               Conread position:
               18-222
               

               Cow position:
               chr26:16826858-16827057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               156, 45
               

               Conread position:
               18-228
               

               Cow position:
               chr26:2337368-2337574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               18-237
               

               Cow position:
               chr26:20634828-20634608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               21-213
               

               Cow position:
               chr26:33128170-33127977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               47-216
               

               Cow position:
               chr26:29693368-29693539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               9-216
               

               Cow position:
               chr27:12735740-12735532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               16-194
               

               Cow position:
               chr27:29575524-29575347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               17-196
               

               Cow position:
               chr27:21164277-21164099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               18-172
               

               Cow position:
               chr27:5293213-5293368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 153
               

               Conread position:
               20-213
               

               Cow position:
               chr27:4384530-4384723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               50, 6
               

               Conread position:
               35-203
               

               Cow position:
               chr27:15698296-15698464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 44
               

               Conread position:
               18-146
               

               Cow position:
               chr28:9235168-9235039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               18-212
               

               Cow position:
               chr28:8910357-8910551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 152
               

               Conread position:
               38-221
               

               Cow position:
               chr28:30236382-30236201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               43-207
               

               Cow position:
               chr28:12158448-12158285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               59-213
               

               Cow position:
               chr28:33316489-33316642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               3-221
               

               Cow position:
               chr29:14476618-14476414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               69, 23
               

               Conread position:
               4-209
               

               Cow position:
               chr29:21472593-21472392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               69, 8
               

               Conread position:
               17-210
               

               Cow position:
               chr29:35621102-35620909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 114
               

               Conread position:
               17-225
               

               Cow position:
               chr29:14632869-14633078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               53, 46
               

               Conread position:
               18-208
               

               Cow position:
               chr29:31817492-31817676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               18-221
               

               Cow position:
               chr29:2201213-2201409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               144, 39
               

               Conread position:
               18-225
               

               Cow position:
               chr29:282327-282115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               18-225
               

               Cow position:
               chr29:14521216-14521010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               51, 115
               

               Conread position:
               19-213
               

               Cow position:
               chr29:17775136-17775341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               31-213
               

               Cow position:
               chr29:35004140-35003958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               32-208
               

               Cow position:
               chr29:19767654-19767827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               36-217
               

               Cow position:
               chr29:37762589-37762407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               59-229
               

               Cow position:
               chr29:20710165-20710334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               158, 54
               

               Conread position:
               12-216
               

               Cow position:
               chr3:38751922-38751717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 99
               

               Conread position:
               12-221
               

               Cow position:
               chr3:40770380-40770589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               60, 152
               

               Conread position:
               12-229
               

               Cow position:
               chr3:72788343-72788559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               59, 156
               

               Conread position:
               18-147
               

               Cow position:
               chr3:41554943-41555072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               18-195
               

               Cow position:
               chr3:48320732-48320909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 146
               

               Conread position:
               18-210
               

               Cow position:
               chr3:9457339-9457146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               18-216
               

               Cow position:
               chr3:36142594-36142395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 128
               

               Conread position:
               18-219
               

               Cow position:
               chr3:28878052-28877854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               18-221
               

               Cow position:
               chr3:7444902-7444698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               110, 73
               

               Conread position:
               18-221
               

               Cow position:
               chr3:25038829-25038625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               18-221
               

               Cow position:
               chr3:37346547-37346347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               54, 76
               

               Conread position:
               18-225
               

               Cow position:
               chr3:47960680-47960473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               10, 190
               

               Conread position:
               18-228
               

               Cow position:
               chr3:14197761-14197551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               53, 111
               

               Conread position:
               18-234
               

               Cow position:
               chr3:59836246-59836463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               54, 194
               

               Conread position:
               19-222
               

               Cow position:
               chr3:25026828-25027036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               20-202
               

               Cow position:
               chr3:35336724-35336542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 144
               

               Conread position:
               20-216
               

               Cow position:
               chr3:36699327-36699524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               53, 151
               

               Conread position:
               21-221
               

               Cow position:
               chr3:15207744-15207942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               53, 142
               

               Conread position:
               22-216
               

               Cow position:
               chr3:53584961-53585153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               48, 66
               

               Conread position:
               25-223
               

               Cow position:
               chr3:35876712-35876915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               31-216
               

               Cow position:
               chr3:74215864-74216051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               34-225
               

               Cow position:
               chr3:33240414-33240229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               38-211
               

               Cow position:
               chr3:45956366-45956542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               79-225
               

               Cow position:
               chr3:63758334-63758187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               3-209
               

               Cow position:
               chr4:49850727-49850933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               71, 20
               

               Conread position:
               16-221
               

               Cow position:
               chr4:10146893-10147099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               18-199
               

               Cow position:
               chr4:28220967-28220783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               18-212
               

               Cow position:
               chr4:45299394-45299590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               18-216
               

               Cow position:
               chr4:13628824-13629021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               48, 102
               

               Conread position:
               18-216
               

               Cow position:
               chr4:45211829-45211634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               50, 80
               

               Conread position:
               18-221
               

               Cow position:
               chr4:43387592-43387794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 105
               

               Conread position:
               18-234
               

               Cow position:
               chr4:42895653-42895869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 104
               

               Conread position:
               19-211
               

               Cow position:
               chr4:42273839-42274027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               20-189
               

               Cow position:
               chr4:10909872-10909705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               20-223
               

               Cow position:
               chr4:24370156-24369965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               59-195
               

               Cow position:
               chr4:40518657-40518793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-221
               

               Cow position:
               chr5:3650260-3650051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               56, 157
               

               Conread position:
               16-226
               

               Cow position:
               chr5:1106679-1106886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               18-209
               

               Cow position:
               chr5:63093592-63093785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               18-221
               

               Cow position:
               chr5:43403880-43403677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               52, 157
               

               Conread position:
               18-240
               

               Cow position:
               chr5:40126346-40126566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               41, 48
               

               Conread position:
               19-190
               

               Cow position:
               chr5:6716710-6716533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               19-221
               

               Cow position:
               chr5:55115473-55115673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 153
               

               Conread position:
               20-220
               

               Cow position:
               chr5:38426983-38426783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               52, 138
               

               Conread position:
               23-167
               

               Cow position:
               chr5:22738722-22738863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               23-220
               

               Cow position:
               chr5:41425407-41425211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 120
               

               Conread position:
               39-207
               

               Cow position:
               chr5:54133025-54133192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 144
               

               Conread position:
               11-190
               

               Cow position:
               chr6:50520251-50520431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 99
               

               Conread position:
               18-207
               

               Cow position:
               chr6:7599431-7599624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               54, 132
               

               Conread position:
               18-212
               

               Cow position:
               chr6:583365-583559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               13, 134
               

               Conread position:
               18-219
               

               Cow position:
               chr6:13886279-13886078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               55, 19
               

               Conread position:
               18-221
               

               Cow position:
               chr6:5960202-5959995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               18-221
               

               Cow position:
               chr6:44924269-44924072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               173, 45
               

               Conread position:
               18-226
               

               Cow position:
               chr6:47023889-47024098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 153
               

               Conread position:
               18-236
               

               Cow position:
               chr6:34741985-34741769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               54, 27
               

               Conread position:
               18-237
               

               Cow position:
               chr6:41167156-41166935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               52, 152
               

               Conread position:
               18-266
               

               Cow position:
               chr6:21522574-21522325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               54, 139
               

               Conread position:
               26-178
               

               Cow position:
               chr6:8110447-8110291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               5, 128
               

               Conread position:
               38-228
               

               Cow position:
               chr6:10437931-10438121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               104, 30
               

               Conread position:
               40-224
               

               Cow position:
               chr6:7719733-7719547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 143
               

               Conread position:
               41-213
               

               Cow position:
               chr6:29754522-29754355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               51-219
               

               Cow position:
               chr6:53777656-53777486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               9, 135
               

               Conread position:
               1-212
               

               Cow position:
               chr7:21537025-21537238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               16-239
               

               Cow position:
               chr7:21917385-21917602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 94
               

               Conread position:
               18-195
               

               Cow position:
               chr7:49692702-49692525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 99
               

               Conread position:
               18-206
               

               Cow position:
               chr7:21902122-21901937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               112, 36
               

               Conread position:
               18-206
               

               Cow position:
               chr7:56970719-56970533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               54, 22
               

               Conread position:
               18-213
               

               Cow position:
               chr7:13611758-13611956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               52, 128
               

               Conread position:
               18-221
               

               Cow position:
               chr7:19895524-19895727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               18-221
               

               Cow position:
               chr7:22498546-22498750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               55, 112
               

               Conread position:
               18-237
               

               Cow position:
               chr7:55682324-55682540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               52, 101
               

               Conread position:
               33-225
               

               Cow position:
               chr7:40576003-40575815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               37, 56
               

               Conread position:
               55-221
               

               Cow position:
               chr7:30703369-30703531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               60-225
               

               Cow position:
               chr7:37217562-37217400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               5, 70
               

               Conread position:
               69-216
               

               Cow position:
               chr7:15657781-15657631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               9-230
               

               Cow position:
               chr8:44300983-44301200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               199, 136
               

               Conread position:
               13-225
               

               Cow position:
               chr8:42664169-42663963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               18-234
               

               Cow position:
               chr8:30044286-30044065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               48, 76
               

               Conread position:
               18-236
               

               Cow position:
               chr8:43028834-43028622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 45
               

               Conread position:
               19-212
               

               Cow position:
               chr8:46304541-46304356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               166, 17
               

               Conread position:
               19-216
               

               Cow position:
               chr8:24800913-24800722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               31-210
               

               Cow position:
               chr8:14068474-14068653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               41, 8
               

               Conread position:
               5-220
               

               Cow position:
               chr9:35030651-35030865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               11-120
               

               Cow position:
               chr9:17554723-17554833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               12-221
               

               Cow position:
               chr9:3338805-3339014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 116
               

               Conread position:
               13-216
               

               Cow position:
               chr9:47715784-47715581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               91, 115
               

               Conread position:
               15-216
               

               Cow position:
               chr9:38391566-38391364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               16-207
               

               Cow position:
               chr9:42470947-42471137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               53, 82
               

               Conread position:
               18-208
               

               Cow position:
               chr9:18563942-18563761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               52, 127
               

               Conread position:
               18-212
               

               Cow position:
               chr9:9675268-9675465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 87
               

               Conread position:
               18-212
               

               Cow position:
               chr9:29107547-29107732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               18-217
               

               Cow position:
               chr9:30725740-30725939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               54, 168
               

               Conread position:
               18-221
               

               Cow position:
               chr9:7544651-7544838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               18-222
               

               Cow position:
               chr9:26254191-26253981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               54, 67
               

               Conread position:
               18-226
               

               Cow position:
               chr9:6371570-6371364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 69
               

               Conread position:
               25-222
               

               Cow position:
               chr9:54101349-54101549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 159
               

               Conread position:
               31-244
               

               Cow position:
               chr9:64126970-64126758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               39, 182
               

               Conread position:
               36-210
               

               Cow position:
               chr9:2042976-2042803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               37, 83
               

               Conread position:
               3-202
               

               Cow position:
               chrX:46277562-46277761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               185, 179
               

               Conread position:
               10-188
               

               Cow position:
               chrX:30433757-30433579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               12, 43
               

               Conread position:
               17-212
               

               Cow position:
               chrX:47636990-47636787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 132
               

               Conread position:
               18-178
               

               Cow position:
               chrX:1075374-1075535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               18-213
               

               Cow position:
               chrX:31748542-31748350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               154, 50
               

               Conread position:
               18-213
               

               Cow position:
               chrX:40165419-40165612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               18-216
               

               Cow position:
               chrX:3848986-3849183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               18, 147
               

               Conread position:
               18-216
               

               Cow position:
               chrX:35003629-35003826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               18-222
               

               Cow position:
               chrX:8277948-8277747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 100
               

               Conread position:
               18-222
               

               Cow position:
               chrX:16560280-16560081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               53, 98
               

               Conread position:
               18-222
               

               Cow position:
               chrX:30483072-30482864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               52, 40
               

               Conread position:
               18-225
               

               Cow position:
               chrX:7979073-7978862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               50, 205
               

               Conread position:
               18-234
               

               Cow position:
               chrX:27403314-27403096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 127
               

               Conread position:
               19-208
               

               Cow position:
               chrX:23194062-23193869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               19-221
               

               Cow position:
               chrX:15605060-15604858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               139, 48
               

               Conread position:
               22-272
               

               Cow position:
               chrX:38325267-38325516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               51, 127
Conread position:	15-221
Cow position:	chr1:158996-159206 (view UCSC Genome Browser custom track)
Alignm length:	211
Alignm identity:	144
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	57, 0
Conread position:	18-212
Cow position:	chr1:83930067-83930261 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	138
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	53, 99
Conread position:	18-213
Cow position:	chr1:8107988-8107794 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	144
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	52, 6
Conread position:	18-216
Cow position:	chr1:8625192-8625388 (view UCSC Genome Browser custom track)
Alignm length:	199
Alignm identity:	140
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	181, 0
Conread position:	18-221
Cow position:	chr1:57975911-57975714 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	149
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	54, 25
Conread position:	18-223
Cow position:	chr1:36001602-36001408 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	147
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	54, 10
Conread position:	18-225
Cow position:	chr1:71070892-71070684 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	147
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	52, 38
Conread position:	19-177
Cow position:	chr1:15417306-15417464 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	115
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	50, 88
Conread position:	21-223
Cow position:	chr1:40709818-40709625 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	143
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	46, 0
Conread position:	21-226
Cow position:	chr1:64723469-64723266 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	153
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	52, 27
Conread position:	24-220
Cow position:	chr1:3446807-3446997 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	141
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	44, 54
Conread position:	28-187
Cow position:	chr1:81472414-81472579 (view UCSC Genome Browser custom track)
Alignm length:	169
Alignm identity:	132
Alignm E-value:	9e-27
Alignm gaps (pig, cow):	43, 58
Conread position:	1-1404
Cow position:	chr10:52374426-52375794 (view UCSC Genome Browser custom track)
Alignm length:	1422
Alignm identity:	1164
Alignm E-value:	0
Alignm gaps (pig, cow):	367, 64
Conread position:	4-217
Cow position:	chr10:17890704-17890490 (view UCSC Genome Browser custom track)
Alignm length:	215
Alignm identity:	144
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	70, 0
Conread position:	9-225
Cow position:	chr10:49181003-49181218 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	147
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	63, 9
Conread position:	18-214
Cow position:	chr10:8178220-8178413 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	148
Alignm E-value:	7e-29
Alignm gaps (pig, cow):	52, 69
Conread position:	18-222
Cow position:	chr10:35908736-35908534 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	145
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	55, 69
Conread position:	20-221
Cow position:	chr10:50206107-50206307 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	149
Alignm E-value:	4e-33
Alignm gaps (pig, cow):	50, 30
Conread position:	21-221
Cow position:	chr10:1941226-1941023 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	150
Alignm E-value:	4e-33
Alignm gaps (pig, cow):	51, 0
Conread position:	22-216
Cow position:	chr10:19454568-19454377 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	141
Alignm E-value:	7e-29
Alignm gaps (pig, cow):	11, 0