Cow genome map
| Conread name: | Ss1.1-Lym2-sn08_B01.f.5 |
| Conread position: | 801-1039 |
| Cow position: | chr10:9945188-9944950 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 787-1015 |
| Cow position: | chr11:46723988-46723754 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 799-1035 |
| Cow position: | chr11:85267914-85268154 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 807-1014 |
| Cow position: | chr13:30973556-30973345 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 799-1035 |
| Cow position: | chr14:33688884-33689124 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 796-1040 |
| Cow position: | chr15:48284360-48284611 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 814-1039 |
| Cow position: | chr16:49279779-49280005 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 72 |
| Conread position: | 804-1014 |
| Cow position: | chr17:11748653-11748858 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 788-1039 |
| Cow position: | chr18:44047810-44048064 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 795-1042 |
| Cow position: | chr18:6061699-6061446 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 5, 103 |
| Conread position: | 795-977 |
| Cow position: | chr19:17067602-17067793 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 807-1033 |
| Cow position: | chr19:17305035-17305252 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 41-205 |
| Cow position: | chr2:14429893-14430057 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 154 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 204-387 |
| Cow position: | chr2:14432657-14432840 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-623 |
| Cow position: | chr2:14433591-14433828 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 586-801 |
| Cow position: | chr2:14436413-14436628 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 812-1039 |
| Cow position: | chr2:35200472-35200235 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 814-1005 |
| Cow position: | chr2:41779796-41779991 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 814-1014 |
| Cow position: | chr2:22340539-22340338 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 175 |
| Conread position: | 853-1039 |
| Cow position: | chr2:72234341-72234160 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 786-1025 |
| Cow position: | chr21:13086253-13086493 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 66, 8 |
| Conread position: | 787-1014 |
| Cow position: | chr21:35581399-35581629 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 799-977 |
| Cow position: | chr22:4298774-4298952 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 14 |
| Conread position: | 804-1035 |
| Cow position: | chr22:10503251-10503493 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 814-1006 |
| Cow position: | chr24:5888127-5887937 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 39, 64 |
| Conread position: | 814-1026 |
| Cow position: | chr24:29408589-29408371 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 162 |
| Conread position: | 810-1026 |
| Cow position: | chr26:8193241-8193018 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 804-1007 |
| Cow position: | chr27:2074904-2075111 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 791-1014 |
| Cow position: | chr3:6662289-6662518 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 795-1039 |
| Cow position: | chr3:82638046-82638292 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 37 |
| Conread position: | 201-387 |
| Cow position: | chr4:37081101-37080915 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 796-1039 |
| Cow position: | chr4:28063871-28064119 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 803-1017 |
| Cow position: | chr6:13872162-13872381 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 858-1014 |
| Cow position: | chr7:44215846-44216005 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 814-1039 |
| Cow position: | chr8:21790126-21790359 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 791-1038 |
| Cow position: | chr9:41467739-41467991 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 807-995 |
| Cow position: | chr9:47810315-47810127 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 814-1018 |
| Cow position: | chr9:46272054-46272258 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 38, 105 |
| Conread position: | 795-1033 |
| Cow position: | chrX:21971634-21971883 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 5, 24 |
| Conread position: | 814-971 |
| Cow position: | chrX:17526050-17525884 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 0 |