Cow genome map
Conread name: | Ss1.1-Mixc-0029b12.3 |
Conread position: | 13-407 |
Cow position: | chr1:69374760-69374382 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 124 |
Conread position: | 101-407 |
Cow position: | chr1:30516494-30516800 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 109-410 |
Cow position: | chr1:6621071-6621378 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 179 |
Conread position: | 13-407 |
Cow position: | chr10:15825839-15825443 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 13-407 |
Cow position: | chr10:69640080-69639687 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 269 |
Conread position: | 29-412 |
Cow position: | chr10:45269931-45270311 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 0 |
Conread position: | 13-407 |
Cow position: | chr11:7724225-7724621 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 13-407 |
Cow position: | chr11:43057908-43058304 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 41-407 |
Cow position: | chr11:68582203-68581837 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 109-421 |
Cow position: | chr11:82946816-82947134 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 179 |
Conread position: | 296-407 |
Cow position: | chr11:16255176-16255287 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 102 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-407 |
Cow position: | chr12:30861740-30861344 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 22-407 |
Cow position: | chr12:1662189-1662574 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-407 |
Cow position: | chr12:1673621-1673999 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 74-407 |
Cow position: | chr12:1636169-1635810 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 247 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 1-1186 |
Cow position: | chr13:27850696-27849508 (view UCSC Genome Browser custom track) |
Alignm length: | 1189 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 13-407 |
Cow position: | chr13:7598918-7599308 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 91 |
Conread position: | 13-407 |
Cow position: | chr13:52263867-52263471 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 307-407 |
Cow position: | chr13:42559945-42560045 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 90 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-407 |
Cow position: | chr15:11070413-11070017 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 13-407 |
Cow position: | chr15:35507100-35506718 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 249 |
Conread position: | 44-407 |
Cow position: | chr15:14106155-14106518 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 175-417 |
Cow position: | chr15:46718117-46717875 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-407 |
Cow position: | chr16:49012043-49011647 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 13-407 |
Cow position: | chr16:52573320-52573715 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 94 |
Conread position: | 29-407 |
Cow position: | chr16:49773480-49773858 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-407 |
Cow position: | chr17:36084440-36084044 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 13-407 |
Cow position: | chr18:46143360-46143753 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 91 |
Conread position: | 13-407 |
Cow position: | chr19:29154107-29154503 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 13-407 |
Cow position: | chr19:41835199-41834806 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 221 |
Conread position: | 29-407 |
Cow position: | chr19:6987697-6987323 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 0 |
Conread position: | 14-407 |
Cow position: | chr2:58003349-58002957 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 213 |
Conread position: | 200-407 |
Cow position: | chr2:9225249-9225456 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-407 |
Cow position: | chr20:28491503-28491898 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 54 |
Conread position: | 140-363 |
Cow position: | chr20:5115426-5115649 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 144 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 207-407 |
Cow position: | chr20:37397972-37397772 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 15-407 |
Cow position: | chr22:41852845-41852452 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 236-407 |
Cow position: | chr22:41962300-41962475 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 148 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 13-407 |
Cow position: | chr23:26341335-26340937 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 21-407 |
Cow position: | chr23:24223249-24223635 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 25-407 |
Cow position: | chr23:24185728-24186110 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 26-417 |
Cow position: | chr23:25804038-25804429 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-407 |
Cow position: | chr23:24170542-24170920 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 59-410 |
Cow position: | chr23:26337828-26338178 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 218-407 |
Cow position: | chr23:35659464-35659653 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 164 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 242-407 |
Cow position: | chr23:5740794-5740629 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 145 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 66-407 |
Cow position: | chr24:40172648-40172989 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 315-407 |
Cow position: | chr26:29165765-29165857 (view UCSC Genome Browser custom track) |
Alignm length: | 93 |
Alignm identity: | 81 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 52-407 |
Cow position: | chr27:26613730-26614085 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 181-407 |
Cow position: | chr27:27865540-27865766 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 269-407 |
Cow position: | chr28:27049907-27050045 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 120 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-407 |
Cow position: | chr29:1838828-1839224 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 3-1051 |
Cow position: | chr3:17591881-17592903 (view UCSC Genome Browser custom track) |
Alignm length: | 1058 |
Alignm identity: | 891 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 454, 19 |
Conread position: | 13-405 |
Cow position: | chr3:1077437-1077830 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 215 |
Conread position: | 14-424 |
Cow position: | chr3:17645404-17645816 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 25-407 |
Cow position: | chr3:62478434-62478052 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-410 |
Cow position: | chr3:62431042-62430661 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-416 |
Cow position: | chr3:62448578-62448965 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-484 |
Cow position: | chr3:62459268-62458820 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 383, 0 |
Conread position: | 29-498 |
Cow position: | chr3:17614442-17614912 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 429, 0 |
Conread position: | 29-498 |
Cow position: | chr3:17624754-17624284 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 429, 0 |
Conread position: | 277-407 |
Cow position: | chr3:56588624-56588752 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 114 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 1050-1811 |
Cow position: | chr3:17592931-17593727 (view UCSC Genome Browser custom track) |
Alignm length: | 817 |
Alignm identity: | 583 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 169 |
Conread position: | 1797-2174 |
Cow position: | chr3:17593823-17594198 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 45 |
Conread position: | 13-407 |
Cow position: | chr4:15926015-15925619 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 170-421 |
Cow position: | chr4:64390607-64390858 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 254-407 |
Cow position: | chr4:35724460-35724307 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 132 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-407 |
Cow position: | chr5:13917393-13916997 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 35-407 |
Cow position: | chr5:31548158-31548530 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 302-407 |
Cow position: | chr5:8026503-8026398 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 93 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-407 |
Cow position: | chr6:56962152-56962549 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 18-407 |
Cow position: | chr6:39755845-39755456 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 26-407 |
Cow position: | chr6:39764562-39764181 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-407 |
Cow position: | chr6:7483636-7484013 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 59-407 |
Cow position: | chr6:20715442-20715790 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 182-331 |
Cow position: | chr6:37164862-37165011 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 134 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-407 |
Cow position: | chr7:13894794-13894398 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 29-410 |
Cow position: | chr7:2957920-2958301 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 57-248 |
Cow position: | chr7:2968580-2968393 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 138 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 111, 48 |
Conread position: | 170-407 |
Cow position: | chr8:11335272-11335035 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 236-407 |
Cow position: | chr8:36912090-36911919 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 146 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 74-407 |
Cow position: | chr9:36521591-36521258 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 166-407 |
Cow position: | chr9:35746073-35746314 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-407 |
Cow position: | chrX:6377823-6378219 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 61-406 |
Cow position: | chrX:15369275-15369613 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 226 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 38, 47 |
Conread position: | 135-407 |
Cow position: | chrX:22916340-22916068 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 157-384 |
Cow position: | chrX:16572722-16572495 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 156 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 0, 0 |