Cow genome map
| Conread name: | Ss1.1-Mixc-0030,a23.3 |
| Conread position: | 193-572 |
| Cow position: | chr1:38366225-38365841 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 289 |
| Conread position: | 209-570 |
| Cow position: | chr1:61705188-61704826 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 130, 20 |
| Conread position: | 232-521 |
| Cow position: | chr1:84595463-84595752 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 249 |
| Conread position: | 181-572 |
| Cow position: | chr10:46174487-46174114 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 161, 49 |
| Conread position: | 280-489 |
| Cow position: | chr10:22557280-22557069 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 161, 202 |
| Conread position: | 176-520 |
| Cow position: | chr11:10106433-10106100 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 50 |
| Conread position: | 183-573 |
| Cow position: | chr12:21954548-21954932 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 1-872 |
| Cow position: | chr13:8934308-8933436 (view UCSC Genome Browser custom track) |
| Alignm length: | 893 |
| Alignm identity: | 668 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 176-462 |
| Cow position: | chr13:19448661-19448949 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 71, 57 |
| Conread position: | 326-479 |
| Cow position: | chr14:44209594-44209751 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 176-573 |
| Cow position: | chr15:10562141-10562528 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 17 |
| Conread position: | 240-573 |
| Cow position: | chr16:326176-326528 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 176-499 |
| Cow position: | chr18:12259470-12259791 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 166-573 |
| Cow position: | chr2:78719978-78719569 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 194 |
| Conread position: | 175-365 |
| Cow position: | chr2:45909652-45909461 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 176-572 |
| Cow position: | chr2:7899442-7899839 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 364-517 |
| Cow position: | chr2:45908679-45908528 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 176-524 |
| Cow position: | chr21:27564979-27565322 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 50 |
| Conread position: | 248-508 |
| Cow position: | chr22:35922025-35921770 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 176-527 |
| Cow position: | chr24:38683282-38682932 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 275 |
| Conread position: | 184-524 |
| Cow position: | chr25:26854066-26853727 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 46 |
| Conread position: | 397-524 |
| Cow position: | chr25:26186396-26186523 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 194-524 |
| Cow position: | chr26:27922946-27923263 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 27, 205 |
| Conread position: | 165-485 |
| Cow position: | chr27:11503185-11503502 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 67 |
| Conread position: | 176-479 |
| Cow position: | chr27:15878413-15878103 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 45 |
| Conread position: | 176-572 |
| Cow position: | chr28:22337258-22337660 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 31 |
| Conread position: | 246-517 |
| Cow position: | chr28:16253841-16253571 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 95 |
| Conread position: | 308-517 |
| Cow position: | chr3:64503661-64503450 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 140, 174 |
| Conread position: | 176-517 |
| Cow position: | chr4:14129865-14130205 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 65 |
| Conread position: | 178-572 |
| Cow position: | chr5:55349487-55349105 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 53 |
| Conread position: | 265-458 |
| Cow position: | chr7:543587-543391 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 181-463 |
| Cow position: | chrX:24576206-24576492 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 129, 47 |