Cow genome map
| Conread name: | Ss1.1-Mixc-0032f14.5 |
| Conread position: | 44-317 |
| Cow position: | chr15:19143625-19143353 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 109, 104 |
| Conread position: | 32-275 |
| Cow position: | chr18:56272311-56272068 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 210, 188 |
| Conread position: | 62-317 |
| Cow position: | chr18:56398583-56398329 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 251, 213 |
| Conread position: | 71-275 |
| Cow position: | chr18:56413627-56413831 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 152, 165 |
| Conread position: | 111-275 |
| Cow position: | chr18:55576841-55576677 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 148, 158 |
| Conread position: | 38-275 |
| Cow position: | chr19:23639991-23640228 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-318 |
| Cow position: | chr19:14951296-14951017 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 237, 0 |
| Conread position: | 8-296 |
| Cow position: | chr21:34231152-34230866 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 38-289 |
| Cow position: | chr22:12537800-12538050 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 237, 0 |
| Conread position: | 38-306 |
| Cow position: | chr22:12443181-12442914 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 184, 196 |
| Conread position: | 56-305 |
| Cow position: | chr22:12485078-12484830 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 166, 181 |
| Conread position: | 7-316 |
| Cow position: | chr23:25730738-25730428 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 24, 232 |
| Conread position: | 38-235 |
| Cow position: | chr23:25691583-25691385 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 106, 100 |
| Conread position: | 38-278 |
| Cow position: | chr23:24538698-24538458 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 203, 186 |
| Conread position: | 38-283 |
| Cow position: | chr23:24568090-24567846 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 78, 82 |
| Conread position: | 38-291 |
| Cow position: | chr23:24622910-24623162 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 237, 0 |
| Conread position: | 38-291 |
| Cow position: | chr23:24648182-24648434 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 186, 198 |
| Conread position: | 38-291 |
| Cow position: | chr23:25617608-25617860 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 182, 197 |
| Conread position: | 43-222 |
| Cow position: | chr23:25658237-25658416 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 53-275 |
| Cow position: | chr23:24527361-24527141 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 29, 85 |
| Conread position: | 56-225 |
| Cow position: | chr23:25703102-25702933 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-283 |
| Cow position: | chr24:17010405-17010658 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 246, 0 |
| Conread position: | 38-222 |
| Cow position: | chr24:17062915-17063099 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 47-318 |
| Cow position: | chr24:17081824-17081554 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 175, 186 |
| Conread position: | 107-222 |
| Cow position: | chr24:16984952-16985067 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-316 |
| Cow position: | chr25:421909-422222 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 0 |
| Conread position: | 5-225 |
| Cow position: | chr25:3639897-3639677 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-291 |
| Cow position: | chr25:321821-322106 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 5-296 |
| Cow position: | chr25:34751235-34751524 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 273, 0 |
| Conread position: | 5-317 |
| Cow position: | chr25:4663698-4663387 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 11-273 |
| Cow position: | chr25:339463-339725 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-297 |
| Cow position: | chr25:3673369-3673653 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 264, 0 |
| Conread position: | 28-275 |
| Cow position: | chr25:33122287-33122534 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 195, 210 |
| Conread position: | 29-317 |
| Cow position: | chr25:34467676-34467965 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 11, 209 |
| Conread position: | 36-317 |
| Cow position: | chr25:22223926-22224206 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 38-275 |
| Cow position: | chr25:33142816-33143053 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 185, 199 |
| Conread position: | 71-317 |
| Cow position: | chr25:34745066-34744821 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 314-396 |
| Cow position: | chr25:423471-423553 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 80 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-221 |
| Cow position: | chr7:27245096-27244904 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-283 |
| Cow position: | chr8:55569497-55569760 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 256, 0 |