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Cow genome map

           
Conread name:
           
Ss1.1-Mixc-0041,j01.5
        

               
Conread position:
               
1100-1277
               

               
Cow position:
               
chr10:40401883-40401711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
69, 84
               

               
Conread position:
               
1123-1295
               

               
Cow position:
               
chr10:32972857-32972686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
1126-1295
               

               
Cow position:
               
chr10:68514266-68514435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
1133-1277
               

               
Cow position:
               
chr10:34704352-34704494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
1135-1277
               

               
Cow position:
               
chr10:52050995-52050858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
1135-1291
               

               
Cow position:
               
chr10:54257122-54256968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
1135-1295
               

               
Cow position:
               
chr10:65759822-65759979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
1136-1295
               

               
Cow position:
               
chr10:53745813-53745659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
1136-1296
               

               
Cow position:
               
chr10:25218515-25218358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
1100-1295
               

               
Cow position:
               
chr11:1886055-1886254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
1125-1296
               

               
Cow position:
               
chr11:58397765-58397596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
1140-1294
               

               
Cow position:
               
chr11:24655695-24655543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
1141-1296
               

               
Cow position:
               
chr11:12160844-12160692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
1150-1294
               

               
Cow position:
               
chr11:20410323-20410179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
1151-1293
               

               
Cow position:
               
chr11:20590575-20590437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
1167-1291
               

               
Cow position:
               
chr11:47644527-47644649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
1076-1295
               

               
Cow position:
               
chr12:936858-937077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
1096-1277
               

               
Cow position:
               
chr12:21136546-21136364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
1096-1295
               

               
Cow position:
               
chr12:3130782-3130977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 30
               

               
Conread position:
               
1100-1294
               

               
Cow position:
               
chr12:29773451-29773258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
1100-1295
               

               
Cow position:
               
chr12:41874348-41874153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
1114-1295
               

               
Cow position:
               
chr12:11831627-11831804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
1124-1290
               

               
Cow position:
               
chr12:14490589-14490426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chr12:4180562-4180397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
1135-1295
               

               
Cow position:
               
chr12:21966195-21966034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
1140-1293
               

               
Cow position:
               
chr12:26186396-26186547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
1098-1285
               

               
Cow position:
               
chr13:55458692-55458877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
1100-1293
               

               
Cow position:
               
chr13:21279173-21279373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
1100-1296
               

               
Cow position:
               
chr13:15788335-15788529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
1101-1296
               

               
Cow position:
               
chr13:12508276-12508084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
1102-1291
               

               
Cow position:
               
chr13:35694093-35694281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
1133-1292
               

               
Cow position:
               
chr13:56901941-56901784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
1133-1294
               

               
Cow position:
               
chr13:6187567-6187409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chr13:29726412-29726252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
1140-1291
               

               
Cow position:
               
chr13:21292645-21292498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
1150-1296
               

               
Cow position:
               
chr13:47571601-47571745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
1157-1296
               

               
Cow position:
               
chr13:32201739-32201874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1101-1296
               

               
Cow position:
               
chr14:4527150-4527349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
1126-1295
               

               
Cow position:
               
chr14:26590975-26590809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
1133-1294
               

               
Cow position:
               
chr14:36792323-36792166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
1151-1295
               

               
Cow position:
               
chr14:38014045-38014187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
1151-1296
               

               
Cow position:
               
chr14:2849862-2850005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
1152-1295
               

               
Cow position:
               
chr14:38999836-38999976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chr15:10828983-10829142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
1133-1296
               

               
Cow position:
               
chr15:545370-545530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
1135-1294
               

               
Cow position:
               
chr15:26066549-26066707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
1135-1295
               

               
Cow position:
               
chr15:47443666-47443825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
1138-1294
               

               
Cow position:
               
chr15:11648975-11649129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
1151-1295
               

               
Cow position:
               
chr15:27108688-27108829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
1151-1295
               

               
Cow position:
               
chr15:28716013-28715869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
1092-1295
               

               
Cow position:
               
chr16:2703043-2703246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
1096-1295
               

               
Cow position:
               
chr16:13351298-13351096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
1100-1295
               

               
Cow position:
               
chr16:54925705-54925515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
1135-1295
               

               
Cow position:
               
chr16:13317541-13317383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
1150-1294
               

               
Cow position:
               
chr16:34265048-34265188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1150-1295
               

               
Cow position:
               
chr16:598512-598655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
1151-1295
               

               
Cow position:
               
chr16:15996096-15995953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
1126-1296
               

               
Cow position:
               
chr17:16887748-16887580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
1133-1293
               

               
Cow position:
               
chr17:38379535-38379690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
1150-1294
               

               
Cow position:
               
chr17:33402282-33402140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
1061-1293
               

               
Cow position:
               
chr18:13354331-13354098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
1076-1295
               

               
Cow position:
               
chr18:27519643-27519866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
15, 112
               

               
Conread position:
               
1099-1295
               

               
Cow position:
               
chr18:42562640-42562451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
1101-1295
               

               
Cow position:
               
chr18:9139673-9139482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
1126-1295
               

               
Cow position:
               
chr18:23724669-23724502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chr18:19305003-19304841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
1133-1296
               

               
Cow position:
               
chr18:36882524-36882688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
1136-1293
               

               
Cow position:
               
chr18:24459980-24460135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
1151-1295
               

               
Cow position:
               
chr18:26319126-26319267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
1092-1293
               

               
Cow position:
               
chr19:24912623-24912827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 97
               

               
Conread position:
               
1102-1295
               

               
Cow position:
               
chr19:15826307-15826501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
1120-1295
               

               
Cow position:
               
chr19:16058883-16058710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
1135-1292
               

               
Cow position:
               
chr19:21784958-21785113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
1135-1296
               

               
Cow position:
               
chr19:21862282-21862118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
1151-1294
               

               
Cow position:
               
chr19:2863819-2863679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1151-1296
               

               
Cow position:
               
chr20:7862178-7862035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
1096-1295
               

               
Cow position:
               
chr21:45450578-45450781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
1100-1296
               

               
Cow position:
               
chr21:6690522-6690326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
1124-1282
               

               
Cow position:
               
chr21:13501363-13501517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1134-1294
               

               
Cow position:
               
chr21:30221552-30221397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
1135-1295
               

               
Cow position:
               
chr21:11300477-11300310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
1138-1295
               

               
Cow position:
               
chr21:9446279-9446434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
1100-1295
               

               
Cow position:
               
chr22:37199500-37199302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
1100-1296
               

               
Cow position:
               
chr22:20170957-20171149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
1100-1296
               

               
Cow position:
               
chr22:27572197-27572007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chr22:39901709-39901869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
1135-1295
               

               
Cow position:
               
chr22:3072418-3072573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
1157-1291
               

               
Cow position:
               
chr22:14511469-14511601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
1102-1294
               

               
Cow position:
               
chr23:12586494-12586295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
1133-1294
               

               
Cow position:
               
chr23:670072-670230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
1134-1296
               

               
Cow position:
               
chr23:27100749-27100591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
1135-1277
               

               
Cow position:
               
chr23:14556679-14556820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
34, 49
               

               
Conread position:
               
1135-1293
               

               
Cow position:
               
chr23:33003933-33003778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
1135-1294
               

               
Cow position:
               
chr23:24255334-24255490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
1151-1295
               

               
Cow position:
               
chr23:22691577-22691718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
1151-1295
               

               
Cow position:
               
chr23:37844340-37844482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
1096-1284
               

               
Cow position:
               
chr24:26036964-26037148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
1103-1283
               

               
Cow position:
               
chr24:44855289-44855466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
1117-1293
               

               
Cow position:
               
chr24:32344849-32344676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chr24:33423002-33423160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1151-1295
               

               
Cow position:
               
chr24:7092802-7092661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1100-1295
               

               
Cow position:
               
chr25:18514978-18515169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
1124-1295
               

               
Cow position:
               
chr25:12506467-12506635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1125-1295
               

               
Cow position:
               
chr25:16533655-16533487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
1135-1294
               

               
Cow position:
               
chr25:38138451-38138609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
1135-1295
               

               
Cow position:
               
chr25:15460292-15460135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
1140-1294
               

               
Cow position:
               
chr25:12178991-12178839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
1140-1296
               

               
Cow position:
               
chr25:35088940-35088787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
1098-1294
               

               
Cow position:
               
chr26:14349123-14348935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
1124-1292
               

               
Cow position:
               
chr26:20605028-20605195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
1124-1293
               

               
Cow position:
               
chr26:17121041-17121209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1124-1295
               

               
Cow position:
               
chr26:2369528-2369695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
1140-1294
               

               
Cow position:
               
chr26:27582128-27582281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
1151-1295
               

               
Cow position:
               
chr26:24610957-24611098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
1159-1292
               

               
Cow position:
               
chr26:233200-233068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
1100-1291
               

               
Cow position:
               
chr27:31467793-31467987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
1125-1294
               

               
Cow position:
               
chr27:17850628-17850459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
47, 58
               

               
Conread position:
               
1141-1295
               

               
Cow position:
               
chr27:24151695-24151543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
1096-1295
               

               
Cow position:
               
chr28:23163835-23163632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
1099-1295
               

               
Cow position:
               
chr28:34283616-34283420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
1134-1293
               

               
Cow position:
               
chr28:6855395-6855240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
1135-1291
               

               
Cow position:
               
chr28:26079441-26079594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
1140-1294
               

               
Cow position:
               
chr28:30574031-30574183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
1141-1291
               

               
Cow position:
               
chr28:23665307-23665455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
1101-1295
               

               
Cow position:
               
chr29:14822842-14823040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
1133-1294
               

               
Cow position:
               
chr29:31896031-31895873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
2-121
               

               
Cow position:
               
chr5:69550850-69550969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-354
               

               
Cow position:
               
chr5:69510797-69511034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
183, 225
               

               
Conread position:
               
120-380
               

               
Cow position:
               
chr5:69551882-69552142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
388-501
               

               
Cow position:
               
chr5:69552398-69552511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
880-1052
               

               
Cow position:
               
chr5:69559400-69559570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1092-1293
               

               
Cow position:
               
chr5:10042618-10042821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
1100-1277
               

               
Cow position:
               
chr5:39437292-39437473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 88
               

               
Conread position:
               
1101-1295
               

               
Cow position:
               
chr5:15835193-15834996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
1133-1293
               

               
Cow position:
               
chr5:33060622-33060468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
1135-1294
               

               
Cow position:
               
chr5:47758382-47758539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 49
               

               
Conread position:
               
1135-1295
               

               
Cow position:
               
chr5:2179558-2179716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
1135-1295
               

               
Cow position:
               
chr5:24609615-24609456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
1151-1295
               

               
Cow position:
               
chr5:53629528-53629670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
1157-1295
               

               
Cow position:
               
chr5:47384115-47383980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
1158-1295
               

               
Cow position:
               
chr5:28860250-28860384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
1100-1294
               

               
Cow position:
               
chr6:44707117-44706923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
1102-1295
               

               
Cow position:
               
chr6:50875279-50875474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
1115-1291
               

               
Cow position:
               
chr6:50799800-50799973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chr6:35274027-35273869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chr6:50979653-50979493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
1135-1292
               

               
Cow position:
               
chr6:8367816-8367664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1135-1293
               

               
Cow position:
               
chr6:46661006-46660850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
1140-1291
               

               
Cow position:
               
chr6:49349782-49349634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
1151-1293
               

               
Cow position:
               
chr6:57367984-57368124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
1104-1295
               

               
Cow position:
               
chr7:53448322-53448134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
1134-1291
               

               
Cow position:
               
chr7:58544745-58544591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
1134-1295
               

               
Cow position:
               
chr7:24468876-24469032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
1148-1296
               

               
Cow position:
               
chr7:56920409-56920263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
1100-1295
               

               
Cow position:
               
chr8:24209632-24209435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
1124-1293
               

               
Cow position:
               
chr8:51500629-51500796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
1133-1290
               

               
Cow position:
               
chr8:38070876-38071032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
1133-1294
               

               
Cow position:
               
chr8:18899649-18899489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chr8:41210105-41210265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chr8:42871719-42871556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
1135-1294
               

               
Cow position:
               
chr8:24788311-24788467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1124-1293
               

               
Cow position:
               
chr9:34086299-34086129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
1124-1295
               

               
Cow position:
               
chr9:10734359-10734528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
1133-1277
               

               
Cow position:
               
chr9:7778325-7778183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chr9:35844270-35844113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
1135-1295
               

               
Cow position:
               
chr9:8040072-8040229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
1136-1295
               

               
Cow position:
               
chr9:18118781-18118938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
1150-1295
               

               
Cow position:
               
chr9:30059373-30059231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
1151-1293
               

               
Cow position:
               
chr9:12851787-12851647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
1097-1253
               

               
Cow position:
               
chrX:39353769-39353615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
1099-1293
               

               
Cow position:
               
chrX:7661916-7661718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
1119-1295
               

               
Cow position:
               
chrX:2398068-2398242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
1126-1292
               

               
Cow position:
               
chrX:28809983-28809819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
1126-1293
               

               
Cow position:
               
chrX:21622021-21621856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
1133-1294
               

               
Cow position:
               
chrX:4264863-4265022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chrX:2061178-2061017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chrX:3521567-3521726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1133-1295
               

               
Cow position:
               
chrX:21823176-21823334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
1135-1295
               

               
Cow position:
               
chrX:10257129-10257295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
1141-1295
               

               
Cow position:
               
chrX:20875393-20875242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 42