Cow genome map
| Conread name: | Ss1.1-Mixc-0042,f23.5 |
| Conread position: | 7-2027 |
| Cow position: | chr11:66708233-66706191 (view UCSC Genome Browser custom track) |
| Alignm length: | 2069 |
| Alignm identity: | 1716 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 228-362 |
| Cow position: | chr11:66652974-66652840 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-414 |
| Cow position: | chr11:67403686-67403871 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 61 |
| Conread position: | 369-542 |
| Cow position: | chr11:66652565-66652392 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 413-1827 |
| Cow position: | chr11:67404236-67405627 (view UCSC Genome Browser custom track) |
| Alignm length: | 1429 |
| Alignm identity: | 1164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 541-722 |
| Cow position: | chr11:66652230-66652049 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 716-850 |
| Cow position: | chr11:66651831-66651697 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 127 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 848-938 |
| Cow position: | chr11:66651577-66651488 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 933-1016 |
| Cow position: | chr11:66651312-66651229 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 77 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1015-1177 |
| Cow position: | chr11:66650322-66650160 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 147 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1179-1297 |
| Cow position: | chr11:66650030-66649912 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1291-1515 |
| Cow position: | chr11:66649830-66649606 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1507-1990 |
| Cow position: | chr11:66649124-66648641 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 162 |
| Conread position: | 1820-2004 |
| Cow position: | chr11:67406015-67406197 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 62 |
| Conread position: | 1814-1970 |
| Cow position: | chr12:8017673-8017516 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 41, 83 |
| Conread position: | 119-997 |
| Cow position: | chr14:46785869-46786749 (view UCSC Genome Browser custom track) |
| Alignm length: | 886 |
| Alignm identity: | 702 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 215 |
| Conread position: | 541-717 |
| Cow position: | chr14:37008495-37008319 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 1325-1495 |
| Cow position: | chr14:37002154-37001984 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 848-1029 |
| Cow position: | chr2:71629276-71629457 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1730-1973 |
| Cow position: | chr20:32469673-32469921 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 245 |
| Conread position: | 1697-2002 |
| Cow position: | chr24:9374077-9374372 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 1696-1996 |
| Cow position: | chr29:1587578-1587881 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 19 |