Cow genome map
| Conread name: | Ss1.1-Mixc-0043,o12.5.5 |
| Conread position: | 6-809 |
| Cow position: | chr1:8907888-8907099 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 173 |
| Conread position: | 50-809 |
| Cow position: | chr1:53021404-53020664 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 224 |
| Conread position: | 1-247 |
| Cow position: | chr10:14623566-14623323 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 274-810 |
| Cow position: | chr10:14623324-14622812 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 81 |
| Conread position: | 1-812 |
| Cow position: | chr11:67285066-67284265 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 584 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 769, 161 |
| Conread position: | 47-203 |
| Cow position: | chr13:35471442-35471598 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 147 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 202-461 |
| Cow position: | chr13:35472576-35472835 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 457-695 |
| Cow position: | chr13:35473435-35473673 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 714-1103 |
| Cow position: | chr13:35474301-35474690 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 456-686 |
| Cow position: | chr15:2142234-2142010 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 148, 58 |
| Conread position: | 1-1005 |
| Cow position: | chr18:1651338-1650333 (view UCSC Genome Browser custom track) |
| Alignm length: | 1006 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 552, 0 |
| Conread position: | 1-188 |
| Cow position: | chr19:15554614-15554801 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-375 |
| Cow position: | chr19:15556037-15556226 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 367-809 |
| Cow position: | chr19:15558460-15558898 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 290 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 107, 102 |
| Conread position: | 456-692 |
| Cow position: | chr2:82503710-82503474 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 1-182 |
| Cow position: | chr22:12531360-12531179 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-812 |
| Cow position: | chr22:35736727-35737358 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 589, 583 |
| Conread position: | 298-794 |
| Cow position: | chr27:30549498-30549998 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 133 |
| Conread position: | 164-812 |
| Cow position: | chr3:2885405-2886052 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 286 |
| Conread position: | 277-812 |
| Cow position: | chr3:17722740-17723274 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 470, 475 |
| Conread position: | 1-497 |
| Cow position: | chr5:2002157-2002641 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 331 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 1-708 |
| Cow position: | chr5:25252210-25252917 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 568-806 |
| Cow position: | chr5:2002680-2002925 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 586-812 |
| Cow position: | chr5:62310868-62311089 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 184, 10 |
| Conread position: | 1-811 |
| Cow position: | chr7:65487313-65486504 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 1-812 |
| Cow position: | chr7:63143357-63142550 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 590 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 289 |
| Conread position: | 132-727 |
| Cow position: | chr7:63517765-63517171 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 451, 0 |
| Conread position: | 1-312 |
| Cow position: | chr9:24248117-24247806 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 321-812 |
| Cow position: | chr9:24247860-24247369 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 449, 443 |