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Cow genome map

           
Conread name:
           
Ss1.1-Mixn-0006b24.5
        

               
Conread position:
               
320-704
               

               
Cow position:
               
chr10:21939165-21938781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
308, 300
               

               
Conread position:
               
321-592
               

               
Cow position:
               
chr10:8996344-8996073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
324-591
               

               
Cow position:
               
chr10:9031332-9031599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
212, 220
               

               
Conread position:
               
331-697
               

               
Cow position:
               
chr10:9010482-9010116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
133, 110
               

               
Conread position:
               
331-704
               

               
Cow position:
               
chr10:8996418-8996045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 116
               

               
Conread position:
               
332-781
               

               
Cow position:
               
chr10:8996501-8996052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
139, 109
               

               
Conread position:
               
338-873
               

               
Cow position:
               
chr10:8996663-8996128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
120, 112
               

               
Conread position:
               
383-783
               

               
Cow position:
               
chr10:8996786-8996387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 120
               

               
Conread position:
               
386-740
               

               
Cow position:
               
chr10:9031310-9031664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
386-858
               

               
Cow position:
               
chr10:9010511-9010039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
149, 136
               

               
Conread position:
               
436-873
               

               
Cow position:
               
chr10:8996901-8996464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
332-866
               

               
Cow position:
               
chr11:74554760-74554226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
231, 236
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr11:74554928-74554387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
228, 235
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr11:74555012-74554471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
337-873
               

               
Cow position:
               
chr11:74555091-74554555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
130, 112
               

               
Conread position:
               
330-704
               

               
Cow position:
               
chr13:56292189-56291817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
299, 45
               

               
Conread position:
               
331-670
               

               
Cow position:
               
chr13:39930823-39931160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
286, 0
               

               
Conread position:
               
331-760
               

               
Cow position:
               
chr13:39930655-39931084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
292, 284
               

               
Conread position:
               
332-700
               

               
Cow position:
               
chr13:39984496-39984864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
215, 203
               

               
Conread position:
               
332-866
               

               
Cow position:
               
chr13:39984328-39984862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
215, 211
               

               
Conread position:
               
332-870
               

               
Cow position:
               
chr13:39984160-39984698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 115
               

               
Conread position:
               
334-868
               

               
Cow position:
               
chr13:39983994-39984528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
213, 220
               

               
Conread position:
               
383-864
               

               
Cow position:
               
chr13:56333691-56334180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
67, 76
               

               
Conread position:
               
390-872
               

               
Cow position:
               
chr13:39930630-39931112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
259, 230
               

               
Conread position:
               
410-792
               

               
Cow position:
               
chr13:56292193-56291815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
460-872
               

               
Cow position:
               
chr13:39930616-39931028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
163, 155
               

               
Conread position:
               
294-865
               

               
Cow position:
               
chr14:3101274-3100713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
317-873
               

               
Cow position:
               
chr14:3080766-3080210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
226, 219
               

               
Conread position:
               
321-592
               

               
Cow position:
               
chr14:680979-681250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
222, 215
               

               
Conread position:
               
321-698
               

               
Cow position:
               
chr14:680895-681272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
272, 279
               

               
Conread position:
               
321-702
               

               
Cow position:
               
chr14:3127686-3127305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
137, 128
               

               
Conread position:
               
331-696
               

               
Cow position:
               
chr14:25784362-25784727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
209, 203
               

               
Conread position:
               
331-696
               

               
Cow position:
               
chr14:25795256-25794891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 131
               

               
Conread position:
               
331-781
               

               
Cow position:
               
chr14:25836729-25837179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
331-855
               

               
Cow position:
               
chr14:447599-448123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
331-858
               

               
Cow position:
               
chr14:25783606-25784133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
117, 131
               

               
Conread position:
               
331-858
               

               
Cow position:
               
chr14:25783942-25784469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
200, 191
               

               
Conread position:
               
331-869
               

               
Cow position:
               
chr14:25794752-25794213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
310, 317
               

               
Conread position:
               
331-869
               

               
Cow position:
               
chr14:25795088-25794550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
130, 116
               

               
Conread position:
               
331-869
               

               
Cow position:
               
chr14:25860118-25860656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
297, 284
               

               
Conread position:
               
331-871
               

               
Cow position:
               
chr14:3127928-3127388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
331-871
               

               
Cow position:
               
chr14:25860034-25860574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
331-871
               

               
Cow position:
               
chr14:25877085-25877625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
331-871
               

               
Cow position:
               
chr14:25895292-25895832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
117, 146
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr14:3080416-3079874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
205, 224
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr14:25859362-25859904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
332-704
               

               
Cow position:
               
chr14:3155420-3155792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
279, 257
               

               
Conread position:
               
332-753
               

               
Cow position:
               
chr14:25860287-25860708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 112
               

               
Conread position:
               
332-768
               

               
Cow position:
               
chr14:25794919-25794483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
117, 130
               

               
Conread position:
               
332-776
               

               
Cow position:
               
chr14:25784195-25784639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
332-858
               

               
Cow position:
               
chr14:25783775-25784301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
118, 130
               

               
Conread position:
               
332-866
               

               
Cow position:
               
chr14:25836310-25836844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
309, 313
               

               
Conread position:
               
332-869
               

               
Cow position:
               
chr14:25783523-25784060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
309, 315
               

               
Conread position:
               
332-871
               

               
Cow position:
               
chr14:3080247-3079708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
310, 316
               

               
Conread position:
               
332-871
               

               
Cow position:
               
chr14:3101157-3100623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
310, 97
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr14:680654-681195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
204, 215
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr14:25836142-25836683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
309, 313
               

               
Conread position:
               
334-867
               

               
Cow position:
               
chr14:25784113-25784646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
136, 113
               

               
Conread position:
               
335-867
               

               
Cow position:
               
chr14:680741-681273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
136, 115
               

               
Conread position:
               
337-869
               

               
Cow position:
               
chr14:25876335-25876867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 44
               

               
Conread position:
               
337-869
               

               
Cow position:
               
chr14:25895634-25896166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 96
               

               
Conread position:
               
338-787
               

               
Cow position:
               
chr14:680828-681279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
222, 227
               

               
Conread position:
               
338-858
               

               
Cow position:
               
chr14:3128005-3127485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
210, 228
               

               
Conread position:
               
338-865
               

               
Cow position:
               
chr14:25895467-25895994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
87, 94
               

               
Conread position:
               
338-899
               

               
Cow position:
               
chr14:25877260-25877821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
342-753
               

               
Cow position:
               
chr14:25877348-25877759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
118, 105
               

               
Conread position:
               
342-844
               

               
Cow position:
               
chr14:25783365-25783867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
78, 61
               

               
Conread position:
               
342-855
               

               
Cow position:
               
chr14:447694-448207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
116, 108
               

               
Conread position:
               
342-864
               

               
Cow position:
               
chr14:25794993-25794471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
128, 105
               

               
Conread position:
               
342-864
               

               
Cow position:
               
chr14:25877012-25877534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
342-866
               

               
Cow position:
               
chr14:25859457-25859981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
118, 108
               

               
Conread position:
               
342-873
               

               
Cow position:
               
chr14:25876592-25877123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
84, 91
               

               
Conread position:
               
344-864
               

               
Cow position:
               
chr14:25859291-25859811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
344-864
               

               
Cow position:
               
chr14:25859963-25860483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
345-858
               

               
Cow position:
               
chr14:25795158-25794645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
119, 126
               

               
Conread position:
               
346-872
               

               
Cow position:
               
chr14:25876680-25877206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
458, 436
               

               
Conread position:
               
346-898
               

               
Cow position:
               
chr14:25836660-25837212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
347-871
               

               
Cow position:
               
chr14:25836241-25836765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
386-781
               

               
Cow position:
               
chr14:25910896-25911291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
121, 117
               

               
Conread position:
               
386-865
               

               
Cow position:
               
chr14:25836448-25836927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
386-871
               

               
Cow position:
               
chr14:25859837-25860322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
121, 117
               

               
Conread position:
               
386-873
               

               
Cow position:
               
chr14:25859921-25860408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
171, 180
               

               
Conread position:
               
390-838
               

               
Cow position:
               
chr14:447574-448022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
251, 227
               

               
Conread position:
               
390-871
               

               
Cow position:
               
chr14:3080273-3079792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
240, 231
               

               
Conread position:
               
392-866
               

               
Cow position:
               
chr14:25910818-25911292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
240, 228
               

               
Conread position:
               
394-865
               

               
Cow position:
               
chr14:25859173-25859644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
203, 218
               

               
Conread position:
               
394-894
               

               
Cow position:
               
chr14:25859257-25859757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
197, 192
               

               
Conread position:
               
396-700
               

               
Cow position:
               
chr14:25860435-25860739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
242, 237
               

               
Conread position:
               
396-872
               

               
Cow position:
               
chr14:25859679-25860155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
240, 224
               

               
Conread position:
               
460-882
               

               
Cow position:
               
chr14:3101449-3101028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 117
               

               
Conread position:
               
470-898
               

               
Cow position:
               
chr14:447570-447998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
162, 179
               

               
Conread position:
               
488-897
               

               
Cow position:
               
chr14:3155408-3155817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
135, 119
               

               
Conread position:
               
491-865
               

               
Cow position:
               
chr14:25836049-25836423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
150, 154
               

               
Conread position:
               
324-669
               

               
Cow position:
               
chr16:14627078-14626733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
134, 118
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr16:14627659-14627117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
223, 201
               

               
Conread position:
               
332-837
               

               
Cow position:
               
chr16:14627238-14626733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
126, 118
               

               
Conread position:
               
344-873
               

               
Cow position:
               
chr16:14627310-14626781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
297, 301
               

               
Conread position:
               
390-866
               

               
Cow position:
               
chr16:14627516-14627040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 81
               

               
Conread position:
               
316-686
               

               
Cow position:
               
chr17:22473582-22473952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
343, 15
               

               
Conread position:
               
321-872
               

               
Cow position:
               
chr17:22553104-22552553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
139, 121
               

               
Conread position:
               
326-705
               

               
Cow position:
               
chr17:22452124-22451745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 124
               

               
Conread position:
               
331-735
               

               
Cow position:
               
chr17:22452203-22451799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
127, 109
               

               
Conread position:
               
331-761
               

               
Cow position:
               
chr17:22499385-22498955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
280, 272
               

               
Conread position:
               
331-864
               

               
Cow position:
               
chr17:22552590-22552057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
226, 235
               

               
Conread position:
               
331-865
               

               
Cow position:
               
chr17:22589756-22589222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
331-868
               

               
Cow position:
               
chr17:22552254-22551717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 119
               

               
Conread position:
               
331-870
               

               
Cow position:
               
chr17:22552086-22551547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
129, 105
               

               
Conread position:
               
331-872
               

               
Cow position:
               
chr17:22552506-22551965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
200, 194
               

               
Conread position:
               
331-875
               

               
Cow position:
               
chr17:22452371-22451828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
131, 111
               

               
Conread position:
               
331-899
               

               
Cow position:
               
chr17:22552758-22552190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
331-899
               

               
Cow position:
               
chr17:22590260-22589692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
212, 199
               

               
Conread position:
               
332-752
               

               
Cow position:
               
chr17:22473513-22473934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
332-858
               

               
Cow position:
               
chr17:22552841-22552315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 120
               

               
Conread position:
               
332-864
               

               
Cow position:
               
chr17:22590007-22589475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 131
               

               
Conread position:
               
332-864
               

               
Cow position:
               
chr17:22590175-22589643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
128, 123
               

               
Conread position:
               
332-867
               

               
Cow position:
               
chr17:22499300-22498765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
310, 319
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr17:22473345-22473886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
128, 105
               

               
Conread position:
               
333-866
               

               
Cow position:
               
chr17:22473262-22473795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
198, 186
               

               
Conread position:
               
334-872
               

               
Cow position:
               
chr17:22552671-22552133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
347-753
               

               
Cow position:
               
chr17:22551902-22551496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
114, 108
               

               
Conread position:
               
347-872
               

               
Cow position:
               
chr17:22452271-22451746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
113, 95
               

               
Conread position:
               
347-872
               

               
Cow position:
               
chr17:22552910-22552385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
113, 94
               

               
Conread position:
               
376-899
               

               
Cow position:
               
chr17:22452410-22451887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
162, 145
               

               
Conread position:
               
408-864
               

               
Cow position:
               
chr17:22590267-22589811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
52, 33
               

               
Conread position:
               
270-872
               

               
Cow position:
               
chr18:42791594-42792188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
115, 18
               

               
Conread position:
               
316-593
               

               
Cow position:
               
chr18:56494177-56494453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
316-608
               

               
Cow position:
               
chr18:53509739-53510027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
143, 8
               

               
Conread position:
               
316-867
               

               
Cow position:
               
chr18:55008808-55009356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
316-868
               

               
Cow position:
               
chr18:55017961-55018512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
136, 16
               

               
Conread position:
               
319-696
               

               
Cow position:
               
chr18:50271714-50272089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
225, 18
               

               
Conread position:
               
319-873
               

               
Cow position:
               
chr18:53636128-53635575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
225, 5
               

               
Conread position:
               
320-865
               

               
Cow position:
               
chr18:53610383-53609838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
153, 161
               

               
Conread position:
               
321-690
               

               
Cow position:
               
chr18:42674816-42674447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
321-775
               

               
Cow position:
               
chr18:43168045-43168499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
321-862
               

               
Cow position:
               
chr18:53586746-53586206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
217, 201
               

               
Conread position:
               
321-869
               

               
Cow position:
               
chr18:42959962-42959423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
272, 207
               

               
Conread position:
               
321-870
               

               
Cow position:
               
chr18:56128206-56128755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
302, 269
               

               
Conread position:
               
321-893
               

               
Cow position:
               
chr18:53509407-53509979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
305, 286
               

               
Conread position:
               
321-893
               

               
Cow position:
               
chr18:53525861-53526433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
388, 398
               

               
Conread position:
               
321-899
               

               
Cow position:
               
chr18:55523309-55523887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
217, 211
               

               
Conread position:
               
323-670
               

               
Cow position:
               
chr18:55523983-55524330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
323-864
               

               
Cow position:
               
chr18:53559677-53560218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
314, 297
               

               
Conread position:
               
324-529
               

               
Cow position:
               
chr18:56247313-56247111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
324-592
               

               
Cow position:
               
chr18:55524068-55524336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
324-656
               

               
Cow position:
               
chr18:53560434-53560766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
217, 209
               

               
Conread position:
               
324-696
               

               
Cow position:
               
chr18:54980236-54980607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
324-699
               

               
Cow position:
               
chr18:33064010-33063635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
140, 111
               

               
Conread position:
               
324-699
               

               
Cow position:
               
chr18:40324292-40323918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
324-704
               

               
Cow position:
               
chr18:49032622-49032242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
134, 104
               

               
Conread position:
               
324-706
               

               
Cow position:
               
chr18:53560350-53560732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
317, 323
               

               
Conread position:
               
324-706
               

               
Cow position:
               
chr18:53586407-53586026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
377, 0
               

               
Conread position:
               
324-707
               

               
Cow position:
               
chr18:40075279-40075661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
183, 170
               

               
Conread position:
               
324-759
               

               
Cow position:
               
chr18:55523900-55524335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
324-768
               

               
Cow position:
               
chr18:56434385-56434828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
314, 279
               

               
Conread position:
               
324-774
               

               
Cow position:
               
chr18:56434217-56434667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
140, 147
               

               
Conread position:
               
324-784
               

               
Cow position:
               
chr18:54968042-54968502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
324-788
               

               
Cow position:
               
chr18:40306509-40306974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
223, 195
               

               
Conread position:
               
324-828
               

               
Cow position:
               
chr18:54993496-54993997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
141, 147
               

               
Conread position:
               
324-844
               

               
Cow position:
               
chr18:55523816-55524336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
324-858
               

               
Cow position:
               
chr18:42985304-42984770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
324-858
               

               
Cow position:
               
chr18:53498225-53498762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 227
               

               
Conread position:
               
324-858
               

               
Cow position:
               
chr18:54993244-54993778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
136, 124
               

               
Conread position:
               
324-864
               

               
Cow position:
               
chr18:42985556-42985017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
133, 126
               

               
Conread position:
               
324-864
               

               
Cow position:
               
chr18:53560014-53560554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
299, 279
               

               
Conread position:
               
324-864
               

               
Cow position:
               
chr18:53586827-53586287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
134, 125
               

               
Conread position:
               
324-864
               

               
Cow position:
               
chr18:54966955-54967495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
138, 124
               

               
Conread position:
               
324-866
               

               
Cow position:
               
chr18:55523564-55524106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
293, 283
               

               
Conread position:
               
324-868
               

               
Cow position:
               
chr18:50848507-50849051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
137, 113
               

               
Conread position:
               
324-871
               

               
Cow position:
               
chr18:41949260-41948713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
136, 113
               

               
Conread position:
               
324-872
               

               
Cow position:
               
chr18:50848927-50849475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
147, 131
               

               
Conread position:
               
324-873
               

               
Cow position:
               
chr18:54967876-54968423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
324-874
               

               
Cow position:
               
chr18:42791558-42792106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
142, 13
               

               
Conread position:
               
325-670
               

               
Cow position:
               
chr18:56434134-56434479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
139, 146
               

               
Conread position:
               
325-691
               

               
Cow position:
               
chr18:55066769-55066403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
325-858
               

               
Cow position:
               
chr18:53559931-53560464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
305, 295
               

               
Conread position:
               
325-859
               

               
Cow position:
               
chr18:54979565-54980099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
325-859
               

               
Cow position:
               
chr18:55008397-55008930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 155
               

               
Conread position:
               
325-859
               

               
Cow position:
               
chr18:55008564-55009098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
325-864
               

               
Cow position:
               
chr18:55008481-55009019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
325-865
               

               
Cow position:
               
chr18:40074943-40075484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
9, 170
               

               
Conread position:
               
325-866
               

               
Cow position:
               
chr18:56493849-56494390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
316, 324
               

               
Conread position:
               
325-868
               

               
Cow position:
               
chr18:54966871-54967415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 221
               

               
Conread position:
               
325-868
               

               
Cow position:
               
chr18:54993160-54993704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
325-868
               

               
Cow position:
               
chr18:55017719-55018260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
325-868
               

               
Cow position:
               
chr18:55017885-55018428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
141, 111
               

               
Conread position:
               
325-869
               

               
Cow position:
               
chr18:55017800-55018345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
9, 125
               

               
Conread position:
               
325-899
               

               
Cow position:
               
chr18:53586911-53586336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
326-866
               

               
Cow position:
               
chr18:33064428-33063888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 135
               

               
Conread position:
               
330-699
               

               
Cow position:
               
chr18:43022641-43022272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
122, 132
               

               
Conread position:
               
330-777
               

               
Cow position:
               
chr18:40324874-40324428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
330-780
               

               
Cow position:
               
chr18:40086170-40085727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
311, 159
               

               
Conread position:
               
330-858
               

               
Cow position:
               
chr18:40324538-40324010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
330-864
               

               
Cow position:
               
chr18:43175346-43174812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
285, 277
               

               
Conread position:
               
330-869
               

               
Cow position:
               
chr18:43022893-43022354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
311, 317
               

               
Conread position:
               
330-871
               

               
Cow position:
               
chr18:40306599-40307140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
135, 107
               

               
Conread position:
               
331-531
               

               
Cow position:
               
chr18:40085925-40085724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
331-536
               

               
Cow position:
               
chr18:43022220-43022015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
130, 119
               

               
Conread position:
               
331-588
               

               
Cow position:
               
chr18:14453109-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
122, 110
               

               
Conread position:
               
331-593
               

               
Cow position:
               
chr18:43174757-43174495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 110
               

               
Conread position:
               
331-612
               

               
Cow position:
               
chr18:50083965-50084245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
129, 116
               

               
Conread position:
               
331-613
               

               
Cow position:
               
chr18:50246508-50246790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
331-696
               

               
Cow position:
               
chr18:33093011-33092646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
205, 188
               

               
Conread position:
               
331-696
               

               
Cow position:
               
chr18:43048717-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 119
               

               
Conread position:
               
331-697
               

               
Cow position:
               
chr18:50295535-50295900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
128, 107
               

               
Conread position:
               
331-699
               

               
Cow position:
               
chr18:44240188-44240556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
118, 131
               

               
Conread position:
               
331-701
               

               
Cow position:
               
chr18:41948917-41948547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
127, 119
               

               
Conread position:
               
331-701
               

               
Cow position:
               
chr18:53635445-53635075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
129, 124
               

               
Conread position:
               
331-705
               

               
Cow position:
               
chr18:43093155-43092783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
130, 110
               

               
Conread position:
               
331-706
               

               
Cow position:
               
chr18:43093239-43092864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
42, 46
               

               
Conread position:
               
331-706
               

               
Cow position:
               
chr18:50295451-50295826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
130, 124
               

               
Conread position:
               
331-724
               

               
Cow position:
               
chr18:50099910-50100303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
331-741
               

               
Cow position:
               
chr18:44184371-44183961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
298, 288
               

               
Conread position:
               
331-752
               

               
Cow position:
               
chr18:41948749-41948328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
129, 119
               

               
Conread position:
               
331-753
               

               
Cow position:
               
chr18:14453277-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
131, 110
               

               
Conread position:
               
331-755
               

               
Cow position:
               
chr18:43174925-43174501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
126, 131
               

               
Conread position:
               
331-761
               

               
Cow position:
               
chr18:1418181-1418611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
205, 215
               

               
Conread position:
               
331-768
               

               
Cow position:
               
chr18:43119976-43119539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
331-774
               

               
Cow position:
               
chr18:1418097-1418540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
331-775
               

               
Cow position:
               
chr18:42837589-42837145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
331-775
               

               
Cow position:
               
chr18:43022472-43022028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
129, 119
               

               
Conread position:
               
331-775
               

               
Cow position:
               
chr18:43022808-43022364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
129, 119
               

               
Conread position:
               
331-775
               

               
Cow position:
               
chr18:43175009-43174565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
141, 126
               

               
Conread position:
               
331-775
               

               
Cow position:
               
chr18:44240104-44240548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
129, 106
               

               
Conread position:
               
331-780
               

               
Cow position:
               
chr18:42674890-42674441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
331-780
               

               
Cow position:
               
chr18:42984961-42984512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
331-780
               

               
Cow position:
               
chr18:43175177-43174728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
119, 131
               

               
Conread position:
               
331-780
               

               
Cow position:
               
chr18:44184539-44184090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
140, 119
               

               
Conread position:
               
331-781
               

               
Cow position:
               
chr18:41198342-41198789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
116, 106
               

               
Conread position:
               
331-781
               

               
Cow position:
               
chr18:50058856-50058408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
129, 105
               

               
Conread position:
               
331-782
               

               
Cow position:
               
chr18:56316480-56316931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
331-783
               

               
Cow position:
               
chr18:42791143-42791594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
280, 272
               

               
Conread position:
               
331-822
               

               
Cow position:
               
chr18:40086503-40086014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
131, 119
               

               
Conread position:
               
331-844
               

               
Cow position:
               
chr18:49033035-49032522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
133, 111
               

               
Conread position:
               
331-858
               

               
Cow position:
               
chr18:42674974-42674447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
331-858
               

               
Cow position:
               
chr18:42744454-42743927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
200, 188
               

               
Conread position:
               
331-858
               

               
Cow position:
               
chr18:42837673-42837146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
331-858
               

               
Cow position:
               
chr18:43023060-43022533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
129, 119
               

               
Conread position:
               
331-858
               

               
Cow position:
               
chr18:43175093-43174566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
129, 111
               

               
Conread position:
               
331-858
               

               
Cow position:
               
chr18:44154443-44153914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 275
               

               
Conread position:
               
331-864
               

               
Cow position:
               
chr18:42791983-42792516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
127, 119
               

               
Conread position:
               
331-864
               

               
Cow position:
               
chr18:42985381-42984848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
331-864
               

               
Cow position:
               
chr18:44184623-44184090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
380, 370
               

               
Conread position:
               
331-864
               

               
Cow position:
               
chr18:50059528-50058995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
331-865
               

               
Cow position:
               
chr18:43093659-43093125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
331-865
               

               
Cow position:
               
chr18:49022491-49023023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
126, 105
               

               
Conread position:
               
331-865
               

               
Cow position:
               
chr18:50099322-50099856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr18:33064171-33063636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 202
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr18:33064255-33063720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 126
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr18:42675142-42674607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
129, 105
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr18:53610540-53610005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
127, 118
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr18:56128384-56128919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 40
               

               
Conread position:
               
331-869
               

               
Cow position:
               
chr18:53610288-53609750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
115, 131
               

               
Conread position:
               
331-870
               

               
Cow position:
               
chr18:40306432-40306971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
145, 116
               

               
Conread position:
               
331-870
               

               
Cow position:
               
chr18:41197502-41198041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 106
               

               
Conread position:
               
331-870
               

               
Cow position:
               
chr18:41198090-41198629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 272
               

               
Conread position:
               
331-870
               

               
Cow position:
               
chr18:44154272-44153740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
129, 119
               

               
Conread position:
               
331-870
               

               
Cow position:
               
chr18:50059192-50058653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
216, 207
               

               
Conread position:
               
331-871
               

               
Cow position:
               
chr18:44398092-44397552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
48, 34
               

               
Conread position:
               
331-871
               

               
Cow position:
               
chr18:56329504-56328964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
331-872
               

               
Cow position:
               
chr18:42744538-42743997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
281, 272
               

               
Conread position:
               
331-872
               

               
Cow position:
               
chr18:43094066-43093538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
331-872
               

               
Cow position:
               
chr18:44398344-44397803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 119
               

               
Conread position:
               
331-872
               

               
Cow position:
               
chr18:49032699-49032158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
141, 136
               

               
Conread position:
               
331-872
               

               
Cow position:
               
chr18:49033287-49032746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
331-872
               

               
Cow position:
               
chr18:50246004-50246545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
331-872
               

               
Cow position:
               
chr18:56330176-56329635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr18:40306768-40307310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
134, 122
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr18:41197586-41198128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 106
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr18:42837841-42837299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
280, 272
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr18:56329420-56328878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
133, 118
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr18:56329924-56329382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
147, 110
               

               
Conread position:
               
331-891
               

               
Cow position:
               
chr18:43093491-43092931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 110
               

               
Conread position:
               
331-891
               

               
Cow position:
               
chr18:43093575-43093015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 194
               

               
Conread position:
               
331-894
               

               
Cow position:
               
chr18:42792319-42792882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
229, 236
               

               
Conread position:
               
331-894
               

               
Cow position:
               
chr18:53635613-53635050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 118
               

               
Conread position:
               
331-895
               

               
Cow position:
               
chr18:50246172-50246736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
331-898
               

               
Cow position:
               
chr18:33092927-33092366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
224, 190
               

               
Conread position:
               
331-899
               

               
Cow position:
               
chr18:52012431-52011864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
344, 21
               

               
Conread position:
               
332-581
               

               
Cow position:
               
chr18:44184202-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
332-656
               

               
Cow position:
               
chr18:42984792-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
128, 110
               

               
Conread position:
               
332-691
               

               
Cow position:
               
chr18:54993588-54993945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
326, 0
               

               
Conread position:
               
332-696
               

               
Cow position:
               
chr18:42837504-42837140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
211, 204
               

               
Conread position:
               
332-696
               

               
Cow position:
               
chr18:52447876-52448240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
129, 118
               

               
Conread position:
               
332-696
               

               
Cow position:
               
chr18:55018228-55018592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
332-698
               

               
Cow position:
               
chr18:49032446-49032080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
332-700
               

               
Cow position:
               
chr18:42744201-42743833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
332-700
               

               
Cow position:
               
chr18:43119891-43119523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 116
               

               
Conread position:
               
332-702
               

               
Cow position:
               
chr18:43022387-43022017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
128, 118
               

               
Conread position:
               
332-702
               

               
Cow position:
               
chr18:56494108-56494478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
332-705
               

               
Cow position:
               
chr18:56247468-56247102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
126, 6
               

               
Conread position:
               
332-707
               

               
Cow position:
               
chr18:51789125-51788750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
201, 213
               

               
Conread position:
               
332-735
               

               
Cow position:
               
chr18:55018396-55018800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
133, 138
               

               
Conread position:
               
332-741
               

               
Cow position:
               
chr18:53498323-53498729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
332-749
               

               
Cow position:
               
chr18:43168140-43168555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
129, 118
               

               
Conread position:
               
332-761
               

               
Cow position:
               
chr18:53560274-53560703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
332-774
               

               
Cow position:
               
chr18:50281854-50282296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
204, 212
               

               
Conread position:
               
332-774
               

               
Cow position:
               
chr18:52447540-52447982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
126, 117
               

               
Conread position:
               
332-774
               

               
Cow position:
               
chr18:56494024-56494466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
125, 116
               

               
Conread position:
               
332-775
               

               
Cow position:
               
chr18:40324452-40324009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
311, 288
               

               
Conread position:
               
332-775
               

               
Cow position:
               
chr18:44184454-44184011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 118
               

               
Conread position:
               
332-775
               

               
Cow position:
               
chr18:53509334-53509777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
332-775
               

               
Cow position:
               
chr18:53525788-53526231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
332-775
               

               
Cow position:
               
chr18:53586483-53586040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
279, 270
               

               
Conread position:
               
332-780
               

               
Cow position:
               
chr18:44398175-44397727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
282, 275
               

               
Conread position:
               
332-780
               

               
Cow position:
               
chr18:54967131-54967579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 187
               

               
Conread position:
               
332-781
               

               
Cow position:
               
chr18:44398007-44397558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
128, 109
               

               
Conread position:
               
332-789
               

               
Cow position:
               
chr18:56128469-56128926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
147, 119
               

               
Conread position:
               
332-844
               

               
Cow position:
               
chr18:50251014-50251523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
202, 135
               

               
Conread position:
               
332-858
               

               
Cow position:
               
chr18:42675309-42674783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 104
               

               
Conread position:
               
332-858
               

               
Cow position:
               
chr18:42744369-42743843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
54, 32
               

               
Conread position:
               
332-858
               

               
Cow position:
               
chr18:44184706-44184180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
515, 520
               

               
Conread position:
               
332-858
               

               
Cow position:
               
chr18:44240021-44240547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
128, 116
               

               
Conread position:
               
332-858
               

               
Cow position:
               
chr18:54967716-54968240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
332-858
               

               
Cow position:
               
chr18:54992832-54993358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
332-859
               

               
Cow position:
               
chr18:55066930-55066403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
294, 272
               

               
Conread position:
               
332-862
               

               
Cow position:
               
chr18:52447708-52448237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 288
               

               
Conread position:
               
332-864
               

               
Cow position:
               
chr18:42675057-42674526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 130
               

               
Conread position:
               
332-864
               

               
Cow position:
               
chr18:43093406-43092875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 109
               

               
Conread position:
               
332-864
               

               
Cow position:
               
chr18:43167888-43168420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
332-864
               

               
Cow position:
               
chr18:50083714-50084245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 54
               

               
Conread position:
               
332-864
               

               
Cow position:
               
chr18:50099575-50100106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
198, 209
               

               
Conread position:
               
332-864
               

               
Cow position:
               
chr18:53560106-53560638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
332-864
               

               
Cow position:
               
chr18:53586651-53586119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 109
               

               
Conread position:
               
332-864
               

               
Cow position:
               
chr18:54979740-54980271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
113, 105
               

               
Conread position:
               
332-864
               

               
Cow position:
               
chr18:54980076-54980607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
131, 116
               

               
Conread position:
               
332-865
               

               
Cow position:
               
chr18:50295284-50295817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
332-865
               

               
Cow position:
               
chr18:53635696-53635163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
148, 125
               

               
Conread position:
               
332-866
               

               
Cow position:
               
chr18:1418014-1418548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 108
               

               
Conread position:
               
332-866
               

               
Cow position:
               
chr18:33064758-33064224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 190
               

               
Conread position:
               
332-866
               

               
Cow position:
               
chr18:42675225-42674691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 272
               

               
Conread position:
               
332-868
               

               
Cow position:
               
chr18:33064590-33064054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 271
               

               
Conread position:
               
332-868
               

               
Cow position:
               
chr18:50059107-50058571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 120
               

               
Conread position:
               
332-868
               

               
Cow position:
               
chr18:54979656-54980192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 190
               

               
Conread position:
               
332-869
               

               
Cow position:
               
chr18:41949084-41948547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
128, 109
               

               
Conread position:
               
332-869
               

               
Cow position:
               
chr18:41949168-41948631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
120, 130
               

               
Conread position:
               
332-869
               

               
Cow position:
               
chr18:43022975-43022438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
128, 110
               

               
Conread position:
               
332-869
               

               
Cow position:
               
chr18:44239853-44240390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
363, 388
               

               
Conread position:
               
332-870
               

               
Cow position:
               
chr18:44184874-44184336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
137, 116
               

               
Conread position:
               
332-870
               

               
Cow position:
               
chr18:50246257-50246795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
211, 201
               

               
Conread position:
               
332-871
               

               
Cow position:
               
chr18:43175260-43174721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 118
               

               
Conread position:
               
332-872
               

               
Cow position:
               
chr18:50083462-50084002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
332-872
               

               
Cow position:
               
chr18:50848683-50849223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
128, 123
               

               
Conread position:
               
332-872
               

               
Cow position:
               
chr18:55067014-55066475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
309, 288
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr18:42744621-42744080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
279, 271
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr18:49032866-49032325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 109
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr18:56329587-56329046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
131, 116
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr18:56493940-56494481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
332-899
               

               
Cow position:
               
chr18:50099239-50099806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 200
               

               
Conread position:
               
332-899
               

               
Cow position:
               
chr18:52447456-52448023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
332-910
               

               
Cow position:
               
chr18:42790976-42791552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
136, 109
               

               
Conread position:
               
332-929
               

               
Cow position:
               
chr18:56316313-56316907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
212, 186
               

               
Conread position:
               
333-701
               

               
Cow position:
               
chr18:14454007-14453639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
333-761
               

               
Cow position:
               
chr18:50295201-50295629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
333-858
               

               
Cow position:
               
chr18:33064925-33064400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 283
               

               
Conread position:
               
333-858
               

               
Cow position:
               
chr18:53587070-53586545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
278, 270
               

               
Conread position:
               
333-866
               

               
Cow position:
               
chr18:42960286-42959753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
333-866
               

               
Cow position:
               
chr18:43175511-43174978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
117, 129
               

               
Conread position:
               
333-872
               

               
Cow position:
               
chr18:50848432-50848971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
333-899
               

               
Cow position:
               
chr18:50049214-50048644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
334-693
               

               
Cow position:
               
chr18:44253877-44253518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 137
               

               
Conread position:
               
334-785
               

               
Cow position:
               
chr18:56128723-56129173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
120, 144
               

               
Conread position:
               
334-864
               

               
Cow position:
               
chr18:33065092-33064563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
334-868
               

               
Cow position:
               
chr18:54993002-54993536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
113, 102
               

               
Conread position:
               
334-873
               

               
Cow position:
               
chr18:41949334-41948795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
126, 103
               

               
Conread position:
               
334-873
               

               
Cow position:
               
chr18:55008657-55009196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
133, 122
               

               
Conread position:
               
335-858
               

               
Cow position:
               
chr18:52012092-52011569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
276, 267
               

               
Conread position:
               
336-761
               

               
Cow position:
               
chr18:55067094-55066669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 105
               

               
Conread position:
               
336-843
               

               
Cow position:
               
chr18:54993340-54993847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 35
               

               
Conread position:
               
336-858
               

               
Cow position:
               
chr18:53525708-53526230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
361, 383
               

               
Conread position:
               
336-858
               

               
Cow position:
               
chr18:55523408-55523930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
206, 186
               

               
Conread position:
               
336-875
               

               
Cow position:
               
chr18:53509254-53509793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 381
               

               
Conread position:
               
336-899
               

               
Cow position:
               
chr18:55523744-55524307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
116, 105
               

               
Conread position:
               
337-761
               

               
Cow position:
               
chr18:50295373-50295797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
337-843
               

               
Cow position:
               
chr18:40306690-40307196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
274, 266
               

               
Conread position:
               
337-873
               

               
Cow position:
               
chr18:40075124-40075660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
121, 113
               

               
Conread position:
               
338-661
               

               
Cow position:
               
chr18:44397833-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
125, 103
               

               
Conread position:
               
338-695
               

               
Cow position:
               
chr18:50271815-50272171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 109
               

               
Conread position:
               
338-705
               

               
Cow position:
               
chr18:51839207-51838840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
125, 112
               

               
Conread position:
               
338-873
               

               
Cow position:
               
chr18:49033364-49032829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
338-899
               

               
Cow position:
               
chr18:50099497-50100058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 145
               

               
Conread position:
               
342-858
               

               
Cow position:
               
chr18:42985454-42984938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
129, 120
               

               
Conread position:
               
342-866
               

               
Cow position:
               
chr18:33093084-33092560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
343-866
               

               
Cow position:
               
chr18:43167983-43168506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 98
               

               
Conread position:
               
344-696
               

               
Cow position:
               
chr18:52433594-52433946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 106
               

               
Conread position:
               
344-706
               

               
Cow position:
               
chr18:42827512-42827874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 106
               

               
Conread position:
               
344-737
               

               
Cow position:
               
chr18:51765302-51764909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
294, 277
               

               
Conread position:
               
344-748
               

               
Cow position:
               
chr18:51752143-51751739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
344-768
               

               
Cow position:
               
chr18:42827428-42827852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
344-858
               

               
Cow position:
               
chr18:43022711-43022197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
397, 376
               

               
Conread position:
               
344-858
               

               
Cow position:
               
chr18:53586975-53586461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
267, 258
               

               
Conread position:
               
344-864
               

               
Cow position:
               
chr18:43167564-43168083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
117, 108
               

               
Conread position:
               
344-866
               

               
Cow position:
               
chr18:50059263-50058741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
344-866
               

               
Cow position:
               
chr18:56316073-56316595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
201, 190
               

               
Conread position:
               
344-868
               

               
Cow position:
               
chr18:50271485-50272009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
344-870
               

               
Cow position:
               
chr18:50048863-50048337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
344-870
               

               
Cow position:
               
chr18:51400556-51401082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
114, 105
               

               
Conread position:
               
344-872
               

               
Cow position:
               
chr18:43093727-43093202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
192, 53
               

               
Conread position:
               
344-872
               

               
Cow position:
               
chr18:44398415-44397887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 301
               

               
Conread position:
               
344-873
               

               
Cow position:
               
chr18:52433510-52434039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
114, 105
               

               
Conread position:
               
344-874
               

               
Cow position:
               
chr18:50059599-50059069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
344-899
               

               
Cow position:
               
chr18:50098999-50099554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
344-899
               

               
Cow position:
               
chr18:50099755-50100310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
181, 201
               

               
Conread position:
               
344-899
               

               
Cow position:
               
chr18:52428077-52428632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
297, 301
               

               
Conread position:
               
345-781
               

               
Cow position:
               
chr18:54992677-54993113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
206, 177
               

               
Conread position:
               
345-866
               

               
Cow position:
               
chr18:50848276-50848797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
115, 103
               

               
Conread position:
               
345-868
               

               
Cow position:
               
chr18:54979417-54979940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
216, 192
               

               
Conread position:
               
345-872
               

               
Cow position:
               
chr18:1417859-1418386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
345-872
               

               
Cow position:
               
chr18:42790905-42791432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
346-700
               

               
Cow position:
               
chr18:51789615-51789261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
114, 104
               

               
Conread position:
               
346-702
               

               
Cow position:
               
chr18:51969617-51969964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
346-750
               

               
Cow position:
               
chr18:51969367-51969769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
114, 104
               

               
Conread position:
               
346-768
               

               
Cow position:
               
chr18:52427911-52428333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
116, 104
               

               
Conread position:
               
346-858
               

               
Cow position:
               
chr18:42837910-42837398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
124, 104
               

               
Conread position:
               
346-864
               

               
Cow position:
               
chr18:54979502-54980020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 103
               

               
Conread position:
               
346-899
               

               
Cow position:
               
chr18:50083392-50083945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
120, 90
               

               
Conread position:
               
346-899
               

               
Cow position:
               
chr18:52433260-52433813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
295, 299
               

               
Conread position:
               
347-704
               

               
Cow position:
               
chr18:51400307-51400664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
347-707
               

               
Cow position:
               
chr18:51812353-51811993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
189, 198
               

               
Conread position:
               
347-750
               

               
Cow position:
               
chr18:51765971-51765568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
113, 103
               

               
Conread position:
               
347-838
               

               
Cow position:
               
chr18:50022292-50021798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
113, 89
               

               
Conread position:
               
347-864
               

               
Cow position:
               
chr18:50271572-50272088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
294, 299
               

               
Conread position:
               
347-894
               

               
Cow position:
               
chr18:51765719-51765172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
113, 100
               

               
Conread position:
               
376-864
               

               
Cow position:
               
chr18:51812828-51812340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
377-838
               

               
Cow position:
               
chr18:43120182-43119721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
234, 226
               

               
Conread position:
               
377-858
               

               
Cow position:
               
chr18:44239814-44240295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
377-870
               

               
Cow position:
               
chr18:44184913-44184420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
377-871
               

               
Cow position:
               
chr18:41949375-41948881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 64
               

               
Conread position:
               
380-870
               

               
Cow position:
               
chr18:50059311-50058821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 75
               

               
Conread position:
               
383-865
               

               
Cow position:
               
chr18:50022340-50021855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
147, 163
               

               
Conread position:
               
384-704
               

               
Cow position:
               
chr18:56248177-56247860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
384-864
               

               
Cow position:
               
chr18:43175544-43175065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
384-874
               

               
Cow position:
               
chr18:41197975-41198465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
384-899
               

               
Cow position:
               
chr18:50245973-50246488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
146, 157
               

               
Conread position:
               
385-696
               

               
Cow position:
               
chr18:52428454-52428765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
256, 260
               

               
Conread position:
               
385-751
               

               
Cow position:
               
chr18:33092705-33092345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
227, 210
               

               
Conread position:
               
385-753
               

               
Cow position:
               
chr18:51766017-51765649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
385-755
               

               
Cow position:
               
chr18:40086533-40086165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
226, 218
               

               
Conread position:
               
385-774
               

               
Cow position:
               
chr18:43023090-43022701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
385-775
               

               
Cow position:
               
chr18:43120006-43119616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
385-864
               

               
Cow position:
               
chr18:42675340-42674861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
147, 140
               

               
Conread position:
               
385-864
               

               
Cow position:
               
chr18:42837703-42837225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
391, 415
               

               
Conread position:
               
385-866
               

               
Cow position:
               
chr18:50083683-50084164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
252, 246
               

               
Conread position:
               
385-899
               

               
Cow position:
               
chr18:43167857-43168371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
385-899
               

               
Cow position:
               
chr18:52432963-52433477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
256, 260
               

               
Conread position:
               
385-899
               

               
Cow position:
               
chr18:52447341-52447855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
386-701
               

               
Cow position:
               
chr18:44253741-44253426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
263, 221
               

               
Conread position:
               
386-751
               

               
Cow position:
               
chr18:40324314-40323949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
77, 63
               

               
Conread position:
               
386-774
               

               
Cow position:
               
chr18:56434363-56434751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 63
               

               
Conread position:
               
386-864
               

               
Cow position:
               
chr18:33064452-33063974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 155
               

               
Conread position:
               
386-867
               

               
Cow position:
               
chr18:42791954-42792435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
255, 261
               

               
Conread position:
               
386-873
               

               
Cow position:
               
chr18:1417984-1418471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
155, 134
               

               
Conread position:
               
386-883
               

               
Cow position:
               
chr18:49022628-49023125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
387-865
               

               
Cow position:
               
chr18:42985577-42985099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
390-784
               

               
Cow position:
               
chr18:49032472-49032078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
222, 212
               

               
Conread position:
               
391-755
               

               
Cow position:
               
chr18:43048741-43048377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
236, 214
               

               
Conread position:
               
392-864
               

               
Cow position:
               
chr18:33093118-33092646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
142, 162
               

               
Conread position:
               
393-873
               

               
Cow position:
               
chr18:56329778-56329298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
394-873
               

               
Cow position:
               
chr18:42744727-42744248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 69
               

               
Conread position:
               
395-875
               

               
Cow position:
               
chr18:53610392-53609912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
396-872
               

               
Cow position:
               
chr18:42827397-42827872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
147, 6
               

               
Conread position:
               
398-859
               

               
Cow position:
               
chr18:53509232-53509693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
398-864
               

               
Cow position:
               
chr18:53525686-53526152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
398-864
               

               
Cow position:
               
chr18:55067116-55066650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
399-866
               

               
Cow position:
               
chr18:33064943-33064476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
166, 137
               

               
Conread position:
               
399-873
               

               
Cow position:
               
chr18:56493839-56494313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
409-866
               

               
Cow position:
               
chr18:56128041-56128499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
7, 199
               

               
Conread position:
               
410-869
               

               
Cow position:
               
chr18:40306175-40306634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
151, 124
               

               
Conread position:
               
410-873
               

               
Cow position:
               
chr18:56330181-56329718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
137, 124
               

               
Conread position:
               
413-835
               

               
Cow position:
               
chr18:55442275-55442698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
191, 199
               

               
Conread position:
               
413-864
               

               
Cow position:
               
chr18:41197500-41197950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
118, 106
               

               
Conread position:
               
414-870
               

               
Cow position:
               
chr18:42837926-42837470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 36
               

               
Conread position:
               
421-872
               

               
Cow position:
               
chr18:51400297-51400748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
431-862
               

               
Cow position:
               
chr18:40324857-40324427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
431-873
               

               
Cow position:
               
chr18:51752224-51751782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
432-899
               

               
Cow position:
               
chr18:50098919-50099386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 90
               

               
Conread position:
               
437-872
               

               
Cow position:
               
chr18:50848118-50848551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
115, 13
               

               
Conread position:
               
453-865
               

               
Cow position:
               
chr18:50031018-50030606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
460-780
               

               
Cow position:
               
chr18:44184914-44184594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 78
               

               
Conread position:
               
460-871
               

               
Cow position:
               
chr18:42985588-42985177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 187
               

               
Conread position:
               
461-873
               

               
Cow position:
               
chr18:56247756-56247352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
183, 172
               

               
Conread position:
               
461-882
               

               
Cow position:
               
chr18:50281731-50282152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
466-864
               

               
Cow position:
               
chr18:14454042-14453645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
468-871
               

               
Cow position:
               
chr18:43023091-43022688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
160, 139
               

               
Conread position:
               
469-866
               

               
Cow position:
               
chr18:42675340-42674943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
159, 138
               

               
Conread position:
               
470-864
               

               
Cow position:
               
chr18:51789575-51789181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 75
               

               
Conread position:
               
470-872
               

               
Cow position:
               
chr18:50271527-50271929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
171, 177
               

               
Conread position:
               
470-897
               

               
Cow position:
               
chr18:50281656-50282083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
482-702
               

               
Cow position:
               
chr18:51969335-51969555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
135, 146
               

               
Conread position:
               
482-869
               

               
Cow position:
               
chr18:14453294-14452907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
483-859
               

               
Cow position:
               
chr18:44398444-44398068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 124
               

               
Conread position:
               
488-867
               

               
Cow position:
               
chr18:53509238-53509617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
490-870
               

               
Cow position:
               
chr18:42827406-42827786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
490-872
               

               
Cow position:
               
chr18:50271463-50271845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
490-873
               

               
Cow position:
               
chr18:56330185-56329802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
497-872
               

               
Cow position:
               
chr18:41197500-41197875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
553-865
               

               
Cow position:
               
chr18:1417983-1418295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 93
               

               
Conread position:
               
607-872
               

               
Cow position:
               
chr18:50295223-50295488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 112
               

               
Conread position:
               
649-873
               

               
Cow position:
               
chr18:14453295-14453071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
155, 121
               

               
Conread position:
               
324-871
               

               
Cow position:
               
chr19:14940412-14940959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
221, 202
               

               
Conread position:
               
325-873
               

               
Cow position:
               
chr19:23649896-23650443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
132, 7
               

               
Conread position:
               
330-704
               

               
Cow position:
               
chr19:14948373-14947999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 103
               

               
Conread position:
               
330-870
               

               
Cow position:
               
chr19:23597039-23597579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
287, 298
               

               
Conread position:
               
331-693
               

               
Cow position:
               
chr19:43570045-43569687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
140, 126
               

               
Conread position:
               
331-704
               

               
Cow position:
               
chr19:14940671-14941044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
128, 106
               

               
Conread position:
               
331-777
               

               
Cow position:
               
chr19:23614619-23615064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
331-780
               

               
Cow position:
               
chr19:23597208-23597657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
47, 43
               

               
Conread position:
               
331-858
               

               
Cow position:
               
chr19:14940167-14940694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
331-864
               

               
Cow position:
               
chr19:20678046-20678578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
119, 151
               

               
Conread position:
               
331-864
               

               
Cow position:
               
chr19:20678130-20678663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
136, 119
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr19:23613779-23614314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
331-867
               

               
Cow position:
               
chr19:23614115-23614651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
130, 119
               

               
Conread position:
               
331-871
               

               
Cow position:
               
chr19:14960380-14959842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
128, 117
               

               
Conread position:
               
331-894
               

               
Cow position:
               
chr19:23649565-23650128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
132, 118
               

               
Conread position:
               
331-900
               

               
Cow position:
               
chr19:23614031-23614600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
303, 275
               

               
Conread position:
               
332-700
               

               
Cow position:
               
chr19:20677795-20678163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
266, 261
               

               
Conread position:
               
332-830
               

               
Cow position:
               
chr19:20635537-20635039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
332-838
               

               
Cow position:
               
chr19:23649818-23650324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
332-857
               

               
Cow position:
               
chr19:23613864-23614389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
280, 270
               

               
Conread position:
               
332-858
               

               
Cow position:
               
chr19:14940252-14940778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
444, 468
               

               
Conread position:
               
332-859
               

               
Cow position:
               
chr19:23613612-23614139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
332-866
               

               
Cow position:
               
chr19:20677879-20678413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
117, 146
               

               
Conread position:
               
332-870
               

               
Cow position:
               
chr19:23649398-23649936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
298, 288
               

               
Conread position:
               
332-899
               

               
Cow position:
               
chr19:23614536-23615103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
135, 109
               

               
Conread position:
               
335-860
               

               
Cow position:
               
chr19:14940087-14940612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
125, 102
               

               
Conread position:
               
335-866
               

               
Cow position:
               
chr19:20677630-20678161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
114, 140
               

               
Conread position:
               
338-700
               

               
Cow position:
               
chr19:23597299-23597662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
338-873
               

               
Cow position:
               
chr19:14940006-14940541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
123, 104
               

               
Conread position:
               
344-899
               

               
Cow position:
               
chr19:23596972-23597524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
365, 63
               

               
Conread position:
               
346-825
               

               
Cow position:
               
chr19:23650000-23650479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
132, 95
               

               
Conread position:
               
347-591
               

               
Cow position:
               
chr19:14959626-14959382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
365-754
               

               
Cow position:
               
chr19:23614400-23614790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
376-699
               

               
Cow position:
               
chr19:14959186-14958869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
378-873
               

               
Cow position:
               
chr19:14960417-14959924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
385-755
               

               
Cow position:
               
chr19:20635400-20635030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
386-774
               

               
Cow position:
               
chr19:14948484-14948097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
386-782
               

               
Cow position:
               
chr19:43570242-43569846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
386-869
               

               
Cow position:
               
chr19:23613582-23614065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
386-873
               

               
Cow position:
               
chr19:14940558-14941045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
391-858
               

               
Cow position:
               
chr19:20635646-20635179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
203, 216
               

               
Conread position:
               
408-864
               

               
Cow position:
               
chr19:23613352-23613808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
465-873
               

               
Cow position:
               
chr19:23649447-23649855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
176, 184
               

               
Conread position:
               
482-866
               

               
Cow position:
               
chr19:20635639-20635255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
128, 120
               

               
Conread position:
               
321-615
               

               
Cow position:
               
chr2:82800113-82800407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 131
               

               
Conread position:
               
321-873
               

               
Cow position:
               
chr2:82799609-82800161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
65, 42
               

               
Conread position:
               
330-864
               

               
Cow position:
               
chr2:78754924-78755456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 112
               

               
Conread position:
               
331-775
               

               
Cow position:
               
chr2:86465443-86465887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
134, 107
               

               
Conread position:
               
331-781
               

               
Cow position:
               
chr2:82799955-82800405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
140, 126
               

               
Conread position:
               
331-864
               

               
Cow position:
               
chr2:78755093-78755623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 152
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr2:78754841-78755375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
213, 203
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr2:82799535-82800070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
140, 116
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr2:86465611-86466146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
153, 142
               

               
Conread position:
               
332-761
               

               
Cow position:
               
chr2:78755429-78755855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr2:82799872-82800413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
216, 204
               

               
Conread position:
               
333-859
               

               
Cow position:
               
chr2:86465109-86465635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 141
               

               
Conread position:
               
336-783
               

               
Cow position:
               
chr2:48689527-48689082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
352, 121
               

               
Conread position:
               
344-866
               

               
Cow position:
               
chr2:78754450-78754956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
82, 88
               

               
Conread position:
               
347-872
               

               
Cow position:
               
chr2:82799467-82799992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
210, 186
               

               
Conread position:
               
390-704
               

               
Cow position:
               
chr2:48689390-48689076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
166, 143
               

               
Conread position:
               
390-738
               

               
Cow position:
               
chr2:82800098-82800446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
298, 305
               

               
Conread position:
               
391-774
               

               
Cow position:
               
chr2:78755905-78756289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
391-872
               

               
Cow position:
               
chr2:78754817-78755298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
237, 216
               

               
Conread position:
               
403-879
               

               
Cow position:
               
chr2:48689626-48689153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr21:12658841-12659383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
310, 318
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr21:12659009-12659551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
272, 278
               

               
Conread position:
               
331-877
               

               
Cow position:
               
chr21:12659513-12660059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
376, 386
               

               
Conread position:
               
332-618
               

               
Cow position:
               
chr21:34222874-34222588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
50, 55
               

               
Conread position:
               
337-897
               

               
Cow position:
               
chr21:12659183-12659743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
343-865
               

               
Cow position:
               
chr21:12608909-12608387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
115, 107
               

               
Conread position:
               
344-833
               

               
Cow position:
               
chr21:34223030-34222541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
305, 276
               

               
Conread position:
               
386-893
               

               
Cow position:
               
chr21:12658980-12659487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
408-873
               

               
Cow position:
               
chr21:34223050-34222585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
218, 208
               

               
Conread position:
               
437-873
               

               
Cow position:
               
chr21:34223102-34222669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
199, 10
               

               
Conread position:
               
310-755
               

               
Cow position:
               
chr22:11666435-11666880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
310-866
               

               
Cow position:
               
chr22:11701089-11701645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
321-695
               

               
Cow position:
               
chr22:12458189-12457815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
321-698
               

               
Cow position:
               
chr22:11666530-11666907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
321-755
               

               
Cow position:
               
chr22:11701184-11701618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
150, 132
               

               
Conread position:
               
321-899
               

               
Cow position:
               
chr22:12431320-12430743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
322-874
               

               
Cow position:
               
chr22:12458610-12458055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
11, 234
               

               
Conread position:
               
324-615
               

               
Cow position:
               
chr22:12499628-12499919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
47, 53
               

               
Conread position:
               
324-747
               

               
Cow position:
               
chr22:12399170-12398749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
221, 212
               

               
Conread position:
               
324-866
               

               
Cow position:
               
chr22:14429732-14430274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
240, 198
               

               
Conread position:
               
328-899
               

               
Cow position:
               
chr22:12431398-12430827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 113
               

               
Conread position:
               
330-865
               

               
Cow position:
               
chr22:12385576-12385039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
141, 106
               

               
Conread position:
               
330-866
               

               
Cow position:
               
chr22:14467983-14468519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
141, 127
               

               
Conread position:
               
330-899
               

               
Cow position:
               
chr22:12431564-12430995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 133
               

               
Conread position:
               
331-699
               

               
Cow position:
               
chr22:14468152-14468520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
133, 110
               

               
Conread position:
               
331-702
               

               
Cow position:
               
chr22:12385321-12384950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
140, 126
               

               
Conread position:
               
331-704
               

               
Cow position:
               
chr22:12430975-12430602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
331-736
               

               
Cow position:
               
chr22:11701278-11701683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
140, 110
               

               
Conread position:
               
331-755
               

               
Cow position:
               
chr22:46654358-46654782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
141, 119
               

               
Conread position:
               
331-774
               

               
Cow position:
               
chr22:14430159-14430602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
120, 133
               

               
Conread position:
               
331-835
               

               
Cow position:
               
chr22:11640951-11641455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
331-864
               

               
Cow position:
               
chr22:12458515-12457983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
310, 314
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr22:11640699-11641234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
140, 110
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr22:11640867-11641402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 206
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr22:12419018-12418483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
262, 268
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr22:12431647-12431112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
281, 276
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr22:46654190-46654725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
131, 117
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr22:12399331-12398789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
131, 110
               

               
Conread position:
               
331-899
               

               
Cow position:
               
chr22:12431479-12430911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
139, 110
               

               
Conread position:
               
331-909
               

               
Cow position:
               
chr22:12431983-12431407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
139, 110
               

               
Conread position:
               
332-584
               

               
Cow position:
               
chr22:12499720-12499972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
332-668
               

               
Cow position:
               
chr22:12475623-12475287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
332-774
               

               
Cow position:
               
chr22:12385404-12384962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
130, 118
               

               
Conread position:
               
332-858
               

               
Cow position:
               
chr22:12431898-12431372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
129, 123
               

               
Conread position:
               
332-864
               

               
Cow position:
               
chr22:12432066-12431534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
128, 110
               

               
Conread position:
               
332-865
               

               
Cow position:
               
chr22:12399414-12398881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
131, 118
               

               
Conread position:
               
332-866
               

               
Cow position:
               
chr22:14429656-14430190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
138, 115
               

               
Conread position:
               
332-868
               

               
Cow position:
               
chr22:12432318-12431782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
114, 130
               

               
Conread position:
               
332-871
               

               
Cow position:
               
chr22:12499384-12499923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
309, 314
               

               
Conread position:
               
332-872
               

               
Cow position:
               
chr22:12476295-12475755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
199, 187
               

               
Conread position:
               
332-872
               

               
Cow position:
               
chr22:12498964-12499504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
199, 186
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr22:12399750-12399209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
204, 213
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr22:12432234-12431693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr22:12476211-12475670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
332-894
               

               
Cow position:
               
chr22:12431226-12430664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 125
               

               
Conread position:
               
332-898
               

               
Cow position:
               
chr22:12499048-12499614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
332-899
               

               
Cow position:
               
chr22:12476043-12475476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
125, 109
               

               
Conread position:
               
333-754
               

               
Cow position:
               
chr22:12432401-12431980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
126, 104
               

               
Conread position:
               
334-871
               

               
Cow position:
               
chr22:12475873-12475336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
293, 259
               

               
Conread position:
               
336-898
               

               
Cow position:
               
chr22:12499304-12499866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
276, 271
               

               
Conread position:
               
337-872
               

               
Cow position:
               
chr22:12458425-12457890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
129, 113
               

               
Conread position:
               
338-870
               

               
Cow position:
               
chr22:12399492-12398960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 104
               

               
Conread position:
               
338-898
               

               
Cow position:
               
chr22:11640790-11641350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 43
               

               
Conread position:
               
342-873
               

               
Cow position:
               
chr22:12399824-12399293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
203, 191
               

               
Conread position:
               
344-775
               

               
Cow position:
               
chr22:12458250-12457819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
191, 177
               

               
Conread position:
               
344-872
               

               
Cow position:
               
chr22:12431130-12430602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 201
               

               
Conread position:
               
344-873
               

               
Cow position:
               
chr22:12385478-12384947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
347-701
               

               
Cow position:
               
chr22:46654458-46654812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
112, 90
               

               
Conread position:
               
347-899
               

               
Cow position:
               
chr22:46654122-46654674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
131, 126
               

               
Conread position:
               
349-870
               

               
Cow position:
               
chr22:46653956-46654477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
211, 218
               

               
Conread position:
               
366-860
               

               
Cow position:
               
chr22:12458648-12458154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
373-873
               

               
Cow position:
               
chr22:46654064-46654564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
91, 77
               

               
Conread position:
               
385-696
               

               
Cow position:
               
chr22:14467954-14468265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
166, 137
               

               
Conread position:
               
385-873
               

               
Cow position:
               
chr22:12498933-12499421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
242, 217
               

               
Conread position:
               
385-875
               

               
Cow position:
               
chr22:12385689-12385197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
386-864
               

               
Cow position:
               
chr22:12431760-12431283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
416, 404
               

               
Conread position:
               
386-872
               

               
Cow position:
               
chr22:12385604-12385116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
75, 57
               

               
Conread position:
               
386-872
               

               
Cow position:
               
chr22:12432432-12431946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
386-873
               

               
Cow position:
               
chr22:12476325-12475838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
228, 221
               

               
Conread position:
               
387-866
               

               
Cow position:
               
chr22:12419315-12418819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
431-872
               

               
Cow position:
               
chr22:11701126-11701567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 94
               

               
Conread position:
               
459-906
               

               
Cow position:
               
chr22:12432443-12431996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
182, 187
               

               
Conread position:
               
463-704
               

               
Cow position:
               
chr22:12419323-12419082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
164, 131
               

               
Conread position:
               
478-784
               

               
Cow position:
               
chr22:14430138-14430444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 77
               

               
Conread position:
               
640-873
               

               
Cow position:
               
chr22:12419313-12419081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 10
               

               
Conread position:
               
275-753
               

               
Cow position:
               
chr23:25698611-25698141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
296, 22
               

               
Conread position:
               
276-613
               

               
Cow position:
               
chr23:24653981-24654324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 167
               

               
Conread position:
               
316-737
               

               
Cow position:
               
chr23:24560559-24560139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 8
               

               
Conread position:
               
320-864
               

               
Cow position:
               
chr23:24522816-24522278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
326-899
               

               
Cow position:
               
chr23:25626118-25626688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
132, 121
               

               
Conread position:
               
330-874
               

               
Cow position:
               
chr23:25626206-25626747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
331-580
               

               
Cow position:
               
chr23:24560377-24560128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
140, 110
               

               
Conread position:
               
331-615
               

               
Cow position:
               
chr23:24626401-24626685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 106
               

               
Conread position:
               
331-616
               

               
Cow position:
               
chr23:25724034-25723749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
331-747
               

               
Cow position:
               
chr23:24535868-24535452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
331-749
               

               
Cow position:
               
chr23:25660328-25660746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
331-864
               

               
Cow position:
               
chr23:24560797-24560265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 40
               

               
Conread position:
               
331-872
               

               
Cow position:
               
chr23:25626543-25627082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
331-894
               

               
Cow position:
               
chr23:24547237-24546674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
135, 110
               

               
Conread position:
               
331-899
               

               
Cow position:
               
chr23:24560713-24560145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 110
               

               
Conread position:
               
331-899
               

               
Cow position:
               
chr23:24639309-24639877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
332-702
               

               
Cow position:
               
chr23:24522558-24522188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
130, 118
               

               
Conread position:
               
332-753
               

               
Cow position:
               
chr23:24535951-24535530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
332-755
               

               
Cow position:
               
chr23:25660245-25660668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 105
               

               
Conread position:
               
332-876
               

               
Cow position:
               
chr23:25626040-25626584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
211, 187
               

               
Conread position:
               
333-766
               

               
Cow position:
               
chr23:24626319-24626750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
295, 283
               

               
Conread position:
               
336-836
               

               
Cow position:
               
chr23:24639566-24640066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
124, 105
               

               
Conread position:
               
336-870
               

               
Cow position:
               
chr23:25660165-25660699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
336-873
               

               
Cow position:
               
chr23:24536031-24535494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
274, 266
               

               
Conread position:
               
336-873
               

               
Cow position:
               
chr23:24639230-24639767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
124, 106
               

               
Conread position:
               
338-705
               

               
Cow position:
               
chr23:25724111-25723744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
303, 309
               

               
Conread position:
               
344-864
               

               
Cow position:
               
chr23:24639490-24640009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
187, 178
               

               
Conread position:
               
344-873
               

               
Cow position:
               
chr23:24639154-24639683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
117, 104
               

               
Conread position:
               
385-703
               

               
Cow position:
               
chr23:25698677-25698359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
385-704
               

               
Cow position:
               
chr23:25698425-25698106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
385-775
               

               
Cow position:
               
chr23:24547267-24546877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
385-873
               

               
Cow position:
               
chr23:25626429-25626914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
101, 106
               

               
Conread position:
               
391-870
               

               
Cow position:
               
chr23:24560821-24560342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
400-777
               

               
Cow position:
               
chr23:24626302-24626678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
410-754
               

               
Cow position:
               
chr23:24522564-24522220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
207, 218
               

               
Conread position:
               
458-873
               

               
Cow position:
               
chr23:24626276-24626691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
459-869
               

               
Cow position:
               
chr23:25625999-25626409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 62
               

               
Conread position:
               
461-865
               

               
Cow position:
               
chr23:24547275-24546871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
167, 146
               

               
Conread position:
               
477-753
               

               
Cow position:
               
chr23:25724056-25723780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
485-872
               

               
Cow position:
               
chr23:25660146-25660533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
485-873
               

               
Cow position:
               
chr23:24536050-24535662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
128, 119
               

               
Conread position:
               
486-864
               

               
Cow position:
               
chr23:25724131-25723753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
130, 144
               

               
Conread position:
               
486-873
               

               
Cow position:
               
chr23:24547334-24546947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
126, 118
               

               
Conread position:
               
486-873
               

               
Cow position:
               
chr23:24560892-24560507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
157, 23
               

               
Conread position:
               
583-857
               

               
Cow position:
               
chr23:24654042-24654316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
218, 193
               

               
Conread position:
               
301-698
               

               
Cow position:
               
chr24:17078026-17077634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
157, 16
               

               
Conread position:
               
330-874
               

               
Cow position:
               
chr24:17070466-17071010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
202, 214
               

               
Conread position:
               
331-738
               

               
Cow position:
               
chr24:17077917-17077510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
331-755
               

               
Cow position:
               
chr24:17070635-17071059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
140, 110
               

               
Conread position:
               
331-869
               

               
Cow position:
               
chr24:17035698-17035160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 119
               

               
Conread position:
               
331-872
               

               
Cow position:
               
chr24:17036538-17035997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
129, 119
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr24:17035950-17035408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
129, 121
               

               
Conread position:
               
331-874
               

               
Cow position:
               
chr24:17078085-17077542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
281, 272
               

               
Conread position:
               
332-776
               

               
Cow position:
               
chr24:17070552-17070996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
211, 190
               

               
Conread position:
               
332-869
               

               
Cow position:
               
chr24:17036117-17035580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 118
               

               
Conread position:
               
344-866
               

               
Cow position:
               
chr24:17036357-17035835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 105
               

               
Conread position:
               
347-833
               

               
Cow position:
               
chr24:17035430-17034943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
113, 103
               

               
Conread position:
               
373-866
               

               
Cow position:
               
chr24:17078126-17077634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
385-738
               

               
Cow position:
               
chr24:17035476-17035123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
385-871
               

               
Cow position:
               
chr24:17035728-17035242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
385-873
               

               
Cow position:
               
chr24:17036400-17035912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 218
               

               
Conread position:
               
385-874
               

               
Cow position:
               
chr24:17036232-17035743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
386-872
               

               
Cow position:
               
chr24:17035811-17035325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
394-858
               

               
Cow position:
               
chr24:17070362-17070826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
400-873
               

               
Cow position:
               
chr24:17036552-17036080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
143, 13
               

               
Conread position:
               
461-873
               

               
Cow position:
               
chr24:17036573-17036164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
276-693
               

               
Cow position:
               
chr25:326458-326867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
352, 17
               

               
Conread position:
               
317-855
               

               
Cow position:
               
chr25:33157479-33156941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
141, 132
               

               
Conread position:
               
318-859
               

               
Cow position:
               
chr25:36800542-36801083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
147, 119
               

               
Conread position:
               
320-873
               

               
Cow position:
               
chr25:326661-327221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 124
               

               
Conread position:
               
321-698
               

               
Cow position:
               
chr25:414775-414407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
367, 11
               

               
Conread position:
               
324-704
               

               
Cow position:
               
chr25:346449-346828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
149, 155
               

               
Conread position:
               
324-873
               

               
Cow position:
               
chr25:34769871-34769322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
331-590
               

               
Cow position:
               
chr25:33127978-33128237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 106
               

               
Conread position:
               
331-592
               

               
Cow position:
               
chr25:33157045-33156785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
331-615
               

               
Cow position:
               
chr25:23420559-23420843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
127, 118
               

               
Conread position:
               
331-700
               

               
Cow position:
               
chr25:34769612-34769243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 43
               

               
Conread position:
               
331-738
               

               
Cow position:
               
chr25:23420391-23420798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
140, 110
               

               
Conread position:
               
331-738
               

               
Cow position:
               
chr25:33127810-33128217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
212, 205
               

               
Conread position:
               
331-740
               

               
Cow position:
               
chr25:34714126-34714533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
130, 108
               

               
Conread position:
               
331-768
               

               
Cow position:
               
chr25:34447366-34447796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
137, 111
               

               
Conread position:
               
331-775
               

               
Cow position:
               
chr25:34447114-34447558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
130, 108
               

               
Conread position:
               
331-784
               

               
Cow position:
               
chr25:33299327-33299780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
129, 119
               

               
Conread position:
               
331-865
               

               
Cow position:
               
chr25:33299243-33299777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 46
               

               
Conread position:
               
331-865
               

               
Cow position:
               
chr25:36800891-36801413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
130, 124
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr25:34769780-34769245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
132, 124
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr25:34770032-34769497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 110
               

               
Conread position:
               
331-869
               

               
Cow position:
               
chr25:33298571-33299109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
213, 195
               

               
Conread position:
               
331-869
               

               
Cow position:
               
chr25:36800639-36801177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
331-870
               

               
Cow position:
               
chr25:33298907-33299446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
331-872
               

               
Cow position:
               
chr25:33298823-33299364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
132, 119
               

               
Conread position:
               
331-899
               

               
Cow position:
               
chr25:33157381-33156813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
311, 318
               

               
Conread position:
               
332-829
               

               
Cow position:
               
chr25:33144942-33145436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
332-858
               

               
Cow position:
               
chr25:36800808-36801334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 118
               

               
Conread position:
               
332-864
               

               
Cow position:
               
chr25:34713875-34714407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
204, 213
               

               
Conread position:
               
332-865
               

               
Cow position:
               
chr25:33298656-33299189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
128, 110
               

               
Conread position:
               
335-865
               

               
Cow position:
               
chr25:33306286-33305760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
195, 119
               

               
Conread position:
               
336-858
               

               
Cow position:
               
chr25:34447035-34447557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
135, 101
               

               
Conread position:
               
338-702
               

               
Cow position:
               
chr25:23420482-23420846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
125, 112
               

               
Conread position:
               
344-692
               

               
Cow position:
               
chr25:33157116-33156767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
114, 105
               

               
Conread position:
               
344-836
               

               
Cow position:
               
chr25:33127739-33128231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
297, 301
               

               
Conread position:
               
344-865
               

               
Cow position:
               
chr25:33144870-33145388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
114, 97
               

               
Conread position:
               
344-873
               

               
Cow position:
               
chr25:23420320-23420849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
211, 194
               

               
Conread position:
               
347-700
               

               
Cow position:
               
chr25:33145038-33145391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
347-781
               

               
Cow position:
               
chr25:22235853-22236287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
160, 156
               

               
Conread position:
               
384-789
               

               
Cow position:
               
chr25:36801520-36801925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 66
               

               
Conread position:
               
385-873
               

               
Cow position:
               
chr25:34770146-34769658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
162, 136
               

               
Conread position:
               
386-873
               

               
Cow position:
               
chr25:33157494-33157007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
390-704
               

               
Cow position:
               
chr25:22235980-22236294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
390-836
               

               
Cow position:
               
chr25:33305417-33304977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
391-873
               

               
Cow position:
               
chr25:33127703-33128184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
400-696
               

               
Cow position:
               
chr25:34732615-34732319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
408-781
               

               
Cow position:
               
chr25:346449-346822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
409-873
               

               
Cow position:
               
chr25:22235830-22236295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 143
               

               
Conread position:
               
410-705
               

               
Cow position:
               
chr25:366728-367023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
133, 123
               

               
Conread position:
               
410-865
               

               
Cow position:
               
chr25:33298566-33299021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
218, 210
               

               
Conread position:
               
430-872
               

               
Cow position:
               
chr25:34446961-34447403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
482-862
               

               
Cow position:
               
chr25:33298470-33298849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 89
               

               
Conread position:
               
33-176
               

               
Cow position:
               
chr28:34671797-34671940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
165-1104
               

               
Cow position:
               
chr28:34673195-34674139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
946
               

               
Alignm identity:
               
889
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 822
               

               
Conread position:
               
324-671
               

               
Cow position:
               
chr28:7758409-7758756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
317, 321
               

               
Conread position:
               
324-698
               

               
Cow position:
               
chr28:7758493-7758867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
306, 283
               

               
Conread position:
               
330-866
               

               
Cow position:
               
chr28:9290008-9290541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
331-596
               

               
Cow position:
               
chr28:9290427-9290691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
331-676
               

               
Cow position:
               
chr28:7810599-7810944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 111
               

               
Conread position:
               
331-704
               

               
Cow position:
               
chr28:34696172-34696545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
331-706
               

               
Cow position:
               
chr28:7757928-7758303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
331-748
               

               
Cow position:
               
chr28:9253195-9253612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
127, 107
               

               
Conread position:
               
331-755
               

               
Cow position:
               
chr28:9290260-9290682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
310, 115
               

               
Conread position:
               
331-859
               

               
Cow position:
               
chr28:7810356-7810875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
331-864
               

               
Cow position:
               
chr28:7757508-7758041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 143
               

               
Conread position:
               
331-865
               

               
Cow position:
               
chr28:7757424-7757958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
224, 191
               

               
Conread position:
               
331-872
               

               
Cow position:
               
chr28:7757760-7758301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 111
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr28:9253027-9253569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 272
               

               
Conread position:
               
332-703
               

               
Cow position:
               
chr28:9290345-9290714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
129, 44
               

               
Conread position:
               
332-861
               

               
Cow position:
               
chr28:11334212-11333683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
46, 41
               

               
Conread position:
               
332-872
               

               
Cow position:
               
chr28:9252944-9253484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr28:34696005-34696546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 55
               

               
Conread position:
               
333-754
               

               
Cow position:
               
chr28:7758334-7758755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
127, 104
               

               
Conread position:
               
335-750
               

               
Cow position:
               
chr28:9298579-9298992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 86
               

               
Conread position:
               
344-675
               

               
Cow position:
               
chr28:11333864-11333533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 92
               

               
Conread position:
               
344-871
               

               
Cow position:
               
chr28:7810285-7810803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
344-872
               

               
Cow position:
               
chr28:7757353-7757881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
369-882
               

               
Cow position:
               
chr28:9290133-9290641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
376-755
               

               
Cow position:
               
chr28:7810560-7810939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
385-899
               

               
Cow position:
               
chr28:9252912-9253427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
390-780
               

               
Cow position:
               
chr28:11333902-11333512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
396-873
               

               
Cow position:
               
chr28:34695985-34696462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
471-898
               

               
Cow position:
               
chr28:34695724-34696151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
491-873
               

               
Cow position:
               
chr28:33210228-33210611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 74
               

               
Conread position:
               
332-581
               

               
Cow position:
               
chr29:39627082-39626833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 118
               

               
Conread position:
               
374-749
               

               
Cow position:
               
chr29:39627208-39626833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
252, 229
               

               
Conread position:
               
298-873
               

               
Cow position:
               
chr3:62722261-62721691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
162, 14
               

               
Conread position:
               
321-529
               

               
Cow position:
               
chr3:68027510-68027717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 127
               

               
Conread position:
               
330-874
               

               
Cow position:
               
chr3:68027015-68027559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
331-534
               

               
Cow position:
               
chr3:62721813-62721610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr3:68027184-68027719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
133, 105
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr3:68045609-68046151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
92, 85
               

               
Conread position:
               
336-738
               

               
Cow position:
               
chr3:62721976-62721574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
337-699
               

               
Cow position:
               
chr3:68045951-68046313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
134, 130
               

               
Conread position:
               
338-699
               

               
Cow position:
               
chr3:68027359-68027720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
124, 104
               

               
Conread position:
               
338-869
               

               
Cow position:
               
chr3:62722310-62721779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
122, 112
               

               
Conread position:
               
344-601
               

               
Cow position:
               
chr3:77350891-77350637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
187, 175
               

               
Conread position:
               
345-777
               

               
Cow position:
               
chr3:68045875-68046306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
425, 0
               

               
Conread position:
               
385-666
               

               
Cow position:
               
chr3:62742755-62743032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
127, 161
               

               
Conread position:
               
410-864
               

               
Cow position:
               
chr3:62722322-62721869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
218, 194
               

               
Conread position:
               
465-872
               

               
Cow position:
               
chr3:68045575-68045982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
126, 121
               

               
Conread position:
               
331-782
               

               
Cow position:
               
chr4:42314944-42314494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
140, 134
               

               
Conread position:
               
342-862
               

               
Cow position:
               
chr4:42315101-42314584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
107, 131
               

               
Conread position:
               
324-873
               

               
Cow position:
               
chr6:49340825-49341374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 321
               

               
Conread position:
               
331-865
               

               
Cow position:
               
chr6:49396385-49396919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
310, 314
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr6:49340916-49341456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
213, 205
               

               
Conread position:
               
331-899
               

               
Cow position:
               
chr6:49340412-49340980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
176, 172
               

               
Conread position:
               
331-899
               

               
Cow position:
               
chr6:49340748-49341316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 314
               

               
Conread position:
               
332-791
               

               
Cow position:
               
chr6:49396554-49397015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
126, 96
               

               
Conread position:
               
332-873
               

               
Cow position:
               
chr6:49340665-49341206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
467, 450
               

               
Conread position:
               
385-899
               

               
Cow position:
               
chr6:49340384-49340896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
256, 9
               

               
Conread position:
               
386-866
               

               
Cow position:
               
chr6:49396272-49396752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
160, 150
               

               
Conread position:
               
390-873
               

               
Cow position:
               
chr6:49396114-49396591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
470-871
               

               
Cow position:
               
chr6:49428963-49429364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
171, 175
               

               
Conread position:
               
628-899
               

               
Cow position:
               
chr6:49340373-49340644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
169, 179
               

               
Conread position:
               
321-704
               

               
Cow position:
               
chr7:18390412-18390795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
320, 326
               

               
Conread position:
               
324-615
               

               
Cow position:
               
chr7:1015108-1015399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
137, 118
               

               
Conread position:
               
330-866
               

               
Cow position:
               
chr7:11601180-11600644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
331-659
               

               
Cow position:
               
chr7:42878596-42878268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
140, 110
               

               
Conread position:
               
331-864
               

               
Cow position:
               
chr7:3179957-3180489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
331-864
               

               
Cow position:
               
chr7:8278024-8278555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
223, 204
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr7:8277604-8278139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
118, 126
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr7:8324825-8325360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
51, 34
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr7:8325329-8325864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
115, 126
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chr7:8325581-8326116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
331-867
               

               
Cow position:
               
chr7:11601011-11600475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
216, 202
               

               
Conread position:
               
331-868
               

               
Cow position:
               
chr7:8243394-8243931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr7:18390170-18390712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
212, 191
               

               
Conread position:
               
331-899
               

               
Cow position:
               
chr7:42878848-42878280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
129, 104
               

               
Conread position:
               
332-581
               

               
Cow position:
               
chr7:3180546-3180795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 42
               

               
Conread position:
               
332-653
               

               
Cow position:
               
chr7:11600758-11600437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
280, 271
               

               
Conread position:
               
332-754
               

               
Cow position:
               
chr7:8243563-8243985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
332-852
               

               
Cow position:
               
chr7:8277857-8278377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
115, 109
               

               
Conread position:
               
332-859
               

               
Cow position:
               
chr7:8325162-8325689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 136
               

               
Conread position:
               
332-865
               

               
Cow position:
               
chr7:42879183-42878650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
131, 109
               

               
Conread position:
               
332-866
               

               
Cow position:
               
chr7:8324994-8325528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
118, 129
               

               
Conread position:
               
332-872
               

               
Cow position:
               
chr7:42879099-42878559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 109
               

               
Conread position:
               
338-704
               

               
Cow position:
               
chr7:1015038-1015404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
344-864
               

               
Cow position:
               
chr7:3179886-3180405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 272
               

               
Conread position:
               
344-872
               

               
Cow position:
               
chr7:42879423-42878895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
345-866
               

               
Cow position:
               
chr7:18390016-18390537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
347-774
               

               
Cow position:
               
chr7:11434708-11434288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
350-858
               

               
Cow position:
               
chr7:3179725-3180232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
128, 9
               

               
Conread position:
               
375-704
               

               
Cow position:
               
chr7:3180422-3180750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
384-873
               

               
Cow position:
               
chr7:3180262-3180751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
385-700
               

               
Cow position:
               
chr7:8324795-8325110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
385-869
               

               
Cow position:
               
chr7:8325551-8326035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
385-870
               

               
Cow position:
               
chr7:8277574-8278059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
400, 421
               

               
Conread position:
               
385-873
               

               
Cow position:
               
chr7:1014917-1015405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
328, 319
               

               
Conread position:
               
385-873
               

               
Cow position:
               
chr7:11601209-11600721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
323, 316
               

               
Conread position:
               
390-866
               

               
Cow position:
               
chr7:1014670-1015146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 81
               

               
Conread position:
               
413-866
               

               
Cow position:
               
chr7:8242805-8243258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
138, 106
               

               
Conread position:
               
466-868
               

               
Cow position:
               
chr7:3179756-3180158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
146, 136
               

               
Conread position:
               
477-866
               

               
Cow position:
               
chr7:11601201-11600812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
318-873
               

               
Cow position:
               
chr8:46815870-46816427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
60, 6
               

               
Conread position:
               
321-870
               

               
Cow position:
               
chr8:48407464-48406915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 204
               

               
Conread position:
               
321-899
               

               
Cow position:
               
chr8:48407128-48406550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
331-691
               

               
Cow position:
               
chr8:45201614-45201974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
131, 104
               

               
Conread position:
               
331-697
               

               
Cow position:
               
chr8:46816893-46817259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
331-753
               

               
Cow position:
               
chr8:45201446-45201868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
139, 119
               

               
Conread position:
               
331-859
               

               
Cow position:
               
chr8:45200942-45201470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
129, 106
               

               
Conread position:
               
331-872
               

               
Cow position:
               
chr8:45201110-45201651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 190
               

               
Conread position:
               
331-873
               

               
Cow position:
               
chr8:55581082-55581624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
331-899
               

               
Cow position:
               
chr8:46816473-46817041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 34
               

               
Conread position:
               
331-899
               

               
Cow position:
               
chr8:48407370-48406802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
135, 110
               

               
Conread position:
               
332-858
               

               
Cow position:
               
chr8:48406949-48406423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
128, 116
               

               
Conread position:
               
332-870
               

               
Cow position:
               
chr8:45201363-45201901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 104
               

               
Conread position:
               
332-872
               

               
Cow position:
               
chr8:46816222-46816762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
332-872
               

               
Cow position:
               
chr8:46816558-46817098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 109
               

               
Conread position:
               
333-858
               

               
Cow position:
               
chr8:48407620-48407095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
333-867
               

               
Cow position:
               
chr8:46815971-46816505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
129, 109
               

               
Conread position:
               
334-881
               

               
Cow position:
               
chr8:45201197-45201743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
137, 108
               

               
Conread position:
               
336-873
               

               
Cow position:
               
chr8:55581003-55581540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
305, 313
               

               
Conread position:
               
344-864
               

               
Cow position:
               
chr8:46816822-46817342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
116, 93
               

               
Conread position:
               
344-865
               

               
Cow position:
               
chr8:46816150-46816671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
344-869
               

               
Cow position:
               
chr8:46816402-46816927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
344-870
               

               
Cow position:
               
chr8:48407021-48406495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
281, 271
               

               
Conread position:
               
345-857
               

               
Cow position:
               
chr8:55580844-55581356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
345-872
               

               
Cow position:
               
chr8:55580760-55581287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
346-698
               

               
Cow position:
               
chr8:48406599-48406238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
295, 301
               

               
Conread position:
               
347-741
               

               
Cow position:
               
chr8:45201546-45201940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
200, 191
               

               
Conread position:
               
347-755
               

               
Cow position:
               
chr8:55581182-55581590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
285, 298
               

               
Conread position:
               
384-754
               

               
Cow position:
               
chr8:48406729-48406359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
257, 261
               

               
Conread position:
               
385-866
               

               
Cow position:
               
chr8:48407148-48406667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
385-873
               

               
Cow position:
               
chr8:48407484-48406996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 222
               

               
Conread position:
               
386-698
               

               
Cow position:
               
chr8:55581389-55581701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
432-894
               

               
Cow position:
               
chr8:46815899-46816364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
66, 188
               

               
Conread position:
               
438-873
               

               
Cow position:
               
chr8:55580768-55581204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
293-867
               

               
Cow position:
               
chrX:25325023-25324455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
324-899
               

               
Cow position:
               
chrX:25309723-25310298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
220, 195
               

               
Conread position:
               
330-612
               

               
Cow position:
               
chrX:29045736-29045455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 112
               

               
Conread position:
               
331-769
               

               
Cow position:
               
chrX:25310150-25310587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
331-833
               

               
Cow position:
               
chrX:25324739-25324237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
129, 124
               

               
Conread position:
               
331-838
               

               
Cow position:
               
chrX:29045168-29044661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
331-858
               

               
Cow position:
               
chrX:25325495-25324968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
212, 201
               

               
Conread position:
               
331-865
               

               
Cow position:
               
chrX:25309898-25310432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chrX:25309814-25310349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chrX:25309982-25310517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
203, 213
               

               
Conread position:
               
331-866
               

               
Cow position:
               
chrX:25325243-25324708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
226, 236
               

               
Conread position:
               
331-874
               

               
Cow position:
               
chrX:25324823-25324280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
135, 119
               

               
Conread position:
               
331-899
               

               
Cow position:
               
chrX:25325327-25324759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 43
               

               
Conread position:
               
332-529
               

               
Cow position:
               
chrX:29045650-29045454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 118
               

               
Conread position:
               
332-838
               

               
Cow position:
               
chrX:25325410-25324904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
226, 187
               

               
Conread position:
               
332-866
               

               
Cow position:
               
chrX:29045251-29044717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
280, 275
               

               
Conread position:
               
332-872
               

               
Cow position:
               
chrX:25325158-25324618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
53, 49
               

               
Conread position:
               
334-899
               

               
Cow position:
               
chrX:29045333-29044768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 118
               

               
Conread position:
               
337-769
               

               
Cow position:
               
chrX:13826934-13826502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
293, 277
               

               
Conread position:
               
384-899
               

               
Cow position:
               
chrX:25325610-25325095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
460-755
               

               
Cow position:
               
chrX:29045774-29045479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
462-860
               

               
Cow position:
               
chrX:25309693-25310091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
81, 64