Cow genome map
| Conread name: | Ss1.1-Mixn-0016o19.5 |
| Conread position: | 2-778 |
| Cow position: | chr10:46593216-46592443 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 617 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 764, 609 |
| Conread position: | 14-471 |
| Cow position: | chr11:85446141-85445684 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 72 |
| Conread position: | 18-515 |
| Cow position: | chr13:37744420-37743924 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 314 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 74, 69 |
| Conread position: | 8-485 |
| Cow position: | chr16:19694708-19695172 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 31 |
| Conread position: | 1-176 |
| Cow position: | chr17:45756253-45756078 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-490 |
| Cow position: | chr17:45722112-45722601 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 483-851 |
| Cow position: | chr17:45724418-45724787 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 300 |
| Conread position: | 12-488 |
| Cow position: | chr18:15605835-15606311 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 261, 244 |
| Conread position: | 2-773 |
| Cow position: | chr2:65211067-65211838 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 687 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-764 |
| Cow position: | chr2:65192058-65191628 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-779 |
| Cow position: | chr21:17712058-17712838 (view UCSC Genome Browser custom track) |
| Alignm length: | 781 |
| Alignm identity: | 652 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 764, 0 |
| Conread position: | 532-783 |
| Cow position: | chr21:9888466-9888707 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 214, 8 |
| Conread position: | 12-471 |
| Cow position: | chr23:31821845-31821385 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 12-471 |
| Cow position: | chr23:31857703-31857244 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 84, 74 |
| Conread position: | 12-488 |
| Cow position: | chr24:29219431-29218955 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 1-487 |
| Cow position: | chr5:67433884-67433398 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-765 |
| Cow position: | chr5:22342821-22343584 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 651 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-777 |
| Cow position: | chr5:22164439-22163667 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 650 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 741, 0 |
| Conread position: | 2-777 |
| Cow position: | chr5:24452791-24453563 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 652 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 741, 0 |
| Conread position: | 389-779 |
| Cow position: | chr5:22301118-22301511 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 377, 0 |
| Conread position: | 483-771 |
| Cow position: | chr5:67429369-67429081 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 528-777 |
| Cow position: | chr5:17899223-17898977 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 160 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 585-777 |
| Cow position: | chr5:22176401-22176212 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 2-779 |
| Cow position: | chr7:292427-291665 (view UCSC Genome Browser custom track) |
| Alignm length: | 786 |
| Alignm identity: | 601 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 83 |
| Conread position: | 12-471 |
| Cow position: | chr7:13896012-13896471 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 84, 74 |