Cow genome map
| Conread name: | Ss1.1-Mixn-0033o14.5 |
| Conread position: | 15-133 |
| Cow position: | chr1:33082414-33082532 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 47-531 |
| Cow position: | chr12:1673230-1672746 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 395 |
| Conread position: | 48-503 |
| Cow position: | chr13:49673775-49674228 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 392 |
| Conread position: | 48-434 |
| Cow position: | chr15:14285357-14284972 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 364, 0 |
| Conread position: | 47-438 |
| Cow position: | chr2:1063091-1062700 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-178 |
| Cow position: | chr2:3103321-3103215 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-584 |
| Cow position: | chr23:24222958-24222395 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 41-438 |
| Cow position: | chr23:26341592-26341991 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 376, 89 |
| Conread position: | 46-531 |
| Cow position: | chr23:25803686-25803210 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 47-421 |
| Cow position: | chr23:26337416-26337048 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 47-438 |
| Cow position: | chr23:25810514-25810905 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 571-704 |
| Cow position: | chr23:24212958-24212826 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 41-405 |
| Cow position: | chr3:17591593-17591230 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 0 |
| Conread position: | 46-436 |
| Cow position: | chr3:62431342-62431732 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 47-438 |
| Cow position: | chr3:62448273-62447882 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 48-503 |
| Cow position: | chr3:62478737-62479190 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 392 |
| Conread position: | 48-528 |
| Cow position: | chr3:62459588-62460063 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 392, 0 |
| Conread position: | 48-538 |
| Cow position: | chr3:17614088-17613586 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 482 |
| Conread position: | 48-541 |
| Cow position: | chr3:17590674-17591157 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 398 |
| Conread position: | 145-538 |
| Cow position: | chr3:17625026-17625431 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 385 |
| Conread position: | 324-431 |
| Cow position: | chr3:62484688-62484581 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 48-440 |
| Cow position: | chr5:57461523-57461134 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 0 |
| Conread position: | 48-430 |
| Cow position: | chr6:39764883-39765265 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 48-537 |
| Cow position: | chr6:39756156-39756634 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 403, 0 |
| Conread position: | 48-527 |
| Cow position: | chr7:2957607-2957120 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 478 |