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Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10064H02.5
        

               
Conread position:
               
27-230
               

               
Cow position:
               
chr10:52889287-52889079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
43-201
               

               
Cow position:
               
chr10:15874118-15873952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
43-201
               

               
Cow position:
               
chr10:20109985-20109825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
43-214
               

               
Cow position:
               
chr10:36498170-36498345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 162
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr10:15391447-15391648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr10:51221106-51220919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr10:49624723-49624927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr10:65072160-65071958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-235
               

               
Cow position:
               
chr10:23096824-23096615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr10:31368776-31368569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr10:10124301-10124501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 186
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr10:16683850-16683652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
44-234
               

               
Cow position:
               
chr10:19590806-19590602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
45-211
               

               
Cow position:
               
chr10:9794701-9794523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
45-224
               

               
Cow position:
               
chr10:29689374-29689180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
45-225
               

               
Cow position:
               
chr10:58608062-58608256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
45-226
               

               
Cow position:
               
chr10:23948961-23948764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
45-230
               

               
Cow position:
               
chr10:6568195-6568384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
45-233
               

               
Cow position:
               
chr10:19704555-19704350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
47-201
               

               
Cow position:
               
chr10:38449351-38449188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
47-202
               

               
Cow position:
               
chr10:41984921-41984761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
49-257
               

               
Cow position:
               
chr10:45606457-45606252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
50-230
               

               
Cow position:
               
chr10:16649963-16649774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
51-202
               

               
Cow position:
               
chr10:6921688-6921844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
52-281
               

               
Cow position:
               
chr10:69225898-69226133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
63-248
               

               
Cow position:
               
chr10:27538484-27538677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 80
               

               
Conread position:
               
66-230
               

               
Cow position:
               
chr10:6490779-6490613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 101
               

               
Conread position:
               
69-179
               

               
Cow position:
               
chr10:8077173-8077060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
69-209
               

               
Cow position:
               
chr10:65130495-65130351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
69-212
               

               
Cow position:
               
chr10:52069986-52069834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr10:23404190-23404357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
69-231
               

               
Cow position:
               
chr10:48255237-48255064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
69-234
               

               
Cow position:
               
chr10:30741368-30741536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 160
               

               
Conread position:
               
75-202
               

               
Cow position:
               
chr10:61426741-61426609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
77-231
               

               
Cow position:
               
chr10:64071395-64071546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 109
               

               
Conread position:
               
78-201
               

               
Cow position:
               
chr10:52244650-52244522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
79-230
               

               
Cow position:
               
chr10:49586469-49586307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
81-202
               

               
Cow position:
               
chr10:26620556-26620435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
83-253
               

               
Cow position:
               
chr10:16386203-16386032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
95-211
               

               
Cow position:
               
chr10:44841553-44841435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 86
               

               
Conread position:
               
95-257
               

               
Cow position:
               
chr10:64364230-64364392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
30-202
               

               
Cow position:
               
chr11:11785288-11785465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
30-236
               

               
Cow position:
               
chr11:50953614-50953392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr11:14941643-14941478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr11:20491534-20491699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
42-260
               

               
Cow position:
               
chr11:69402287-69402070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 170
               

               
Conread position:
               
43-197
               

               
Cow position:
               
chr11:34946109-34945944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr11:5648708-5648871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr11:31422693-31422863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-207
               

               
Cow position:
               
chr11:24243758-24243932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-211
               

               
Cow position:
               
chr11:38845299-38845121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr11:40275638-40275436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr11:40279130-40278928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr11:52832755-52832561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr11:67236364-67236559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 193
               

               
Conread position:
               
43-236
               

               
Cow position:
               
chr11:8828666-8828460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
43-257
               

               
Cow position:
               
chr11:84795786-84795560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
43-324
               

               
Cow position:
               
chr11:17151638-17151922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 200
               

               
Conread position:
               
44-206
               

               
Cow position:
               
chr11:50951520-50951691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
44-229
               

               
Cow position:
               
chr11:696382-696186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
24, 186
               

               
Conread position:
               
44-229
               

               
Cow position:
               
chr11:32438988-32438788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
44-270
               

               
Cow position:
               
chr11:67871639-67871398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
45-202
               

               
Cow position:
               
chr11:7683931-7684089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
45-230
               

               
Cow position:
               
chr11:63508379-63508575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
21, 194
               

               
Conread position:
               
45-244
               

               
Cow position:
               
chr11:19259549-19259332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
49-230
               

               
Cow position:
               
chr11:19606286-19606477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
49-230
               

               
Cow position:
               
chr11:30210877-30211069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 190
               

               
Conread position:
               
50-231
               

               
Cow position:
               
chr11:65988197-65988387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
61-230
               

               
Cow position:
               
chr11:42519724-42519897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
63-206
               

               
Cow position:
               
chr11:34136489-34136638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
63-226
               

               
Cow position:
               
chr11:64904986-64905154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
61, 147
               

               
Conread position:
               
65-225
               

               
Cow position:
               
chr11:18913158-18913319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 30
               

               
Conread position:
               
69-211
               

               
Cow position:
               
chr11:61427588-61427734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
69-224
               

               
Cow position:
               
chr11:60985283-60985123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
69-229
               

               
Cow position:
               
chr11:19501963-19502132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
69-229
               

               
Cow position:
               
chr11:44609559-44609724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
69-231
               

               
Cow position:
               
chr11:9055955-9056123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
69-253
               

               
Cow position:
               
chr11:41272131-41272325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 183
               

               
Conread position:
               
75-230
               

               
Cow position:
               
chr11:43646412-43646245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
77-219
               

               
Cow position:
               
chr11:77008044-77008190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
77-254
               

               
Cow position:
               
chr11:47193517-47193705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
78-225
               

               
Cow position:
               
chr11:54244677-54244833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
79-230
               

               
Cow position:
               
chr11:40269590-40269433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
79-255
               

               
Cow position:
               
chr11:5188133-5188314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
68, 153
               

               
Conread position:
               
81-248
               

               
Cow position:
               
chr11:373139-372958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
20-201
               

               
Cow position:
               
chr12:25933611-25933793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
36-233
               

               
Cow position:
               
chr12:7645868-7645663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
43-200
               

               
Cow position:
               
chr12:24559299-24559468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
43-201
               

               
Cow position:
               
chr12:30596408-30596579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr12:27055549-27055747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr12:29448589-29448788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr12:31198708-31198907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
44-251
               

               
Cow position:
               
chr12:13657801-13657584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
25, 189
               

               
Conread position:
               
48-197
               

               
Cow position:
               
chr12:25312422-25312269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
69-193
               

               
Cow position:
               
chr12:10846674-10846551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
69-225
               

               
Cow position:
               
chr12:4582919-4583081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr12:5680656-5680828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr12:39781366-39781197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
75-231
               

               
Cow position:
               
chr12:32413495-32413654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
68, 134
               

               
Conread position:
               
77-230
               

               
Cow position:
               
chr12:11081118-11080955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
78-230
               

               
Cow position:
               
chr12:7274717-7274561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
80-230
               

               
Cow position:
               
chr12:34090113-34090266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
90-253
               

               
Cow position:
               
chr12:35706912-35706740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
38-210
               

               
Cow position:
               
chr13:22075680-22075493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
42-233
               

               
Cow position:
               
chr13:29034807-29034618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
42-252
               

               
Cow position:
               
chr13:12233443-12233675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-201
               

               
Cow position:
               
chr13:46284612-46284771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 26
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr13:33282010-33281841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
43-208
               

               
Cow position:
               
chr13:11834475-11834648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr13:9665065-9664867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 145
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr13:33975430-33975235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr13:49200639-49200443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr13:11794444-11794254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 142
               

               
Conread position:
               
44-231
               

               
Cow position:
               
chr13:49457686-49457486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
44-233
               

               
Cow position:
               
chr13:52568998-52569205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
45-214
               

               
Cow position:
               
chr13:20466282-20466467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
45-230
               

               
Cow position:
               
chr13:661641-661834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
45-252
               

               
Cow position:
               
chr13:31852766-31852548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
45-259
               

               
Cow position:
               
chr13:32904782-32904560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
24, 181
               

               
Conread position:
               
46-214
               

               
Cow position:
               
chr13:23265735-23265550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
48-178
               

               
Cow position:
               
chr13:3016175-3016312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
48-230
               

               
Cow position:
               
chr13:34995334-34995527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
60-253
               

               
Cow position:
               
chr13:11171219-11171013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr13:10932524-10932359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 75
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr13:20180387-20180218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
69-232
               

               
Cow position:
               
chr13:32773331-32773164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
70-233
               

               
Cow position:
               
chr13:25435150-25435324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
71-202
               

               
Cow position:
               
chr13:1958979-1958843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
71-230
               

               
Cow position:
               
chr13:8822834-8822672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
75-202
               

               
Cow position:
               
chr13:21627918-21628045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
105, 60
               

               
Conread position:
               
75-230
               

               
Cow position:
               
chr13:47188404-47188247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
79-230
               

               
Cow position:
               
chr13:21403446-21403599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
86-231
               

               
Cow position:
               
chr13:25207070-25206920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr14:28605296-28605125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr14:10692205-10692401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 150
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr14:43031860-43031649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
42-245
               

               
Cow position:
               
chr14:15039874-15040081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
42-246
               

               
Cow position:
               
chr14:31785028-31784824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
43-180
               

               
Cow position:
               
chr14:20435454-20435308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-214
               

               
Cow position:
               
chr14:47551216-47551398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr14:19022836-19023037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr14:37678941-37679144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 197
               

               
Conread position:
               
43-235
               

               
Cow position:
               
chr14:21018172-21017971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 188
               

               
Conread position:
               
44-199
               

               
Cow position:
               
chr14:23107385-23107218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
44-201
               

               
Cow position:
               
chr14:47519691-47519858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr14:2189694-2189496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 196
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr14:26108694-26108494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 198
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr14:47604238-47604434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
23, 194
               

               
Conread position:
               
45-202
               

               
Cow position:
               
chr14:12559420-12559584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
45-230
               

               
Cow position:
               
chr14:21691215-21691416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
45-230
               

               
Cow position:
               
chr14:44861176-44861372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 101
               

               
Conread position:
               
46-214
               

               
Cow position:
               
chr14:6441968-6441783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
47-230
               

               
Cow position:
               
chr14:39058638-39058436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
65-230
               

               
Cow position:
               
chr14:7647984-7648161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr14:26153239-26153409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
69-233
               

               
Cow position:
               
chr14:20795803-20795634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 97
               

               
Conread position:
               
76-214
               

               
Cow position:
               
chr14:47693718-47693574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
78-237
               

               
Cow position:
               
chr14:7987405-7987565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
85-233
               

               
Cow position:
               
chr14:11582074-11581922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
42-199
               

               
Cow position:
               
chr15:38322945-38322778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr15:25689073-25688872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr15:10570507-10570674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
43-229
               

               
Cow position:
               
chr15:31599439-31599245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr15:34255620-34255812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-243
               

               
Cow position:
               
chr15:23109174-23109391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
44-202
               

               
Cow position:
               
chr15:20482739-20482908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
44-202
               

               
Cow position:
               
chr15:24285088-24284924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
44-202
               

               
Cow position:
               
chr15:27863218-27863387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr15:6749742-6749938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr15:42195159-42195355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 145
               

               
Conread position:
               
45-230
               

               
Cow position:
               
chr15:24977072-24977266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
52-230
               

               
Cow position:
               
chr15:8022150-8021962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
60-241
               

               
Cow position:
               
chr15:23224466-23224644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 88
               

               
Conread position:
               
61-201
               

               
Cow position:
               
chr15:28177540-28177394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
69-178
               

               
Cow position:
               
chr15:26673507-26673616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr15:8230489-8230657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr15:24411496-24411326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
69-232
               

               
Cow position:
               
chr15:49237916-49238084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 162
               

               
Conread position:
               
69-252
               

               
Cow position:
               
chr15:40498216-40498396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 117
               

               
Conread position:
               
75-199
               

               
Cow position:
               
chr15:19280016-19280150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
75-230
               

               
Cow position:
               
chr15:43612153-43611990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
76-230
               

               
Cow position:
               
chr15:30958145-30958304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
76-250
               

               
Cow position:
               
chr15:20370657-20370839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
84-214
               

               
Cow position:
               
chr15:17213520-17213384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
38-218
               

               
Cow position:
               
chr16:28267047-28266866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 154
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr16:228516-228314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr16:15938548-15938381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr16:19003107-19002941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr16:32837563-32837398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
43-211
               

               
Cow position:
               
chr16:37719138-37719318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr16:47909363-47909159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr16:49320945-49321138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr16:52577438-52577641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr16:44898768-44898578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
43-233
               

               
Cow position:
               
chr16:23025327-23025521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
43-247
               

               
Cow position:
               
chr16:45693129-45693342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
43-252
               

               
Cow position:
               
chr16:21462011-21462228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
44-202
               

               
Cow position:
               
chr16:15805936-15806102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr16:48493161-48493363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 200
               

               
Conread position:
               
45-220
               

               
Cow position:
               
chr16:10303763-10303583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
45-234
               

               
Cow position:
               
chr16:53267708-53267910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
48-233
               

               
Cow position:
               
chr16:16546062-16546253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 187
               

               
Conread position:
               
49-232
               

               
Cow position:
               
chr16:44581086-44580891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
64-230
               

               
Cow position:
               
chr16:11085376-11085199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 175
               

               
Conread position:
               
64-230
               

               
Cow position:
               
chr16:16056052-16055878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
69-200
               

               
Cow position:
               
chr16:23978421-23978285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
74-232
               

               
Cow position:
               
chr16:47116087-47116250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
75-202
               

               
Cow position:
               
chr16:50114204-50114338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
84-225
               

               
Cow position:
               
chr16:3566191-3566340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
103-253
               

               
Cow position:
               
chr16:23990462-23990310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
79, 131
               

               
Conread position:
               
38-327
               

               
Cow position:
               
chr17:10769488-10769196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr17:10220871-10221039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr17:31798430-31798226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
42-235
               

               
Cow position:
               
chr17:13229398-13229605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
43-189
               

               
Cow position:
               
chr17:8926193-8926042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 122
               

               
Conread position:
               
43-200
               

               
Cow position:
               
chr17:19891644-19891812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
26, 132
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr17:38139529-38139698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-223
               

               
Cow position:
               
chr17:30236217-30236406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
43-228
               

               
Cow position:
               
chr17:8279685-8279494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
43-229
               

               
Cow position:
               
chr17:26614708-26614512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr17:2271020-2271219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 129
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr17:36400122-36400320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr17:144155-143956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr17:18887746-18887558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 102
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr17:37138783-37138983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-326
               

               
Cow position:
               
chr17:27505117-27505413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
44-197
               

               
Cow position:
               
chr17:21373698-21373859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr17:36173951-36173744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
46-223
               

               
Cow position:
               
chr17:13716011-13715819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
46-237
               

               
Cow position:
               
chr17:24880767-24880969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 194
               

               
Conread position:
               
53-219
               

               
Cow position:
               
chr17:7595184-7595355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
69-225
               

               
Cow position:
               
chr17:27819347-27819509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
70-201
               

               
Cow position:
               
chr17:36818093-36818225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
114, 100
               

               
Conread position:
               
70-230
               

               
Cow position:
               
chr17:8215245-8215411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 98
               

               
Conread position:
               
76-230
               

               
Cow position:
               
chr17:11655436-11655601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
77-202
               

               
Cow position:
               
chr17:10314481-10314611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
78-211
               

               
Cow position:
               
chr17:8093908-8094045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
84-214
               

               
Cow position:
               
chr17:37043349-37043216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
21-202
               

               
Cow position:
               
chr18:26372845-26373037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
23-230
               

               
Cow position:
               
chr18:48458609-48458820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
24-234
               

               
Cow position:
               
chr18:48036743-48036971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
27-231
               

               
Cow position:
               
chr18:30566624-30566415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
42-201
               

               
Cow position:
               
chr18:43113997-43113833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
42-208
               

               
Cow position:
               
chr18:16726596-16726771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
42-215
               

               
Cow position:
               
chr18:42061022-42061210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-195
               

               
Cow position:
               
chr18:32773825-32773988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr18:38126501-38126333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr18:45961325-45961156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr18:6157864-6158058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr18:16448504-16448688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
43-234
               

               
Cow position:
               
chr18:51298429-51298633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
44-233
               

               
Cow position:
               
chr18:25970684-25970494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
45-230
               

               
Cow position:
               
chr18:19363888-19364082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
25, 121
               

               
Conread position:
               
47-224
               

               
Cow position:
               
chr18:50700638-50700828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
49-225
               

               
Cow position:
               
chr18:32909008-32909186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
7, 170
               

               
Conread position:
               
50-253
               

               
Cow position:
               
chr18:55697066-55696854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
52-230
               

               
Cow position:
               
chr18:44493527-44493336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
53-226
               

               
Cow position:
               
chr18:15831636-15831457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 123
               

               
Conread position:
               
56-202
               

               
Cow position:
               
chr18:21706220-21706067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
56-230
               

               
Cow position:
               
chr18:39503735-39503551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
69-217
               

               
Cow position:
               
chr18:15689264-15689418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr18:20127127-20126958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
69-252
               

               
Cow position:
               
chr18:2438784-2438597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 162
               

               
Conread position:
               
70-230
               

               
Cow position:
               
chr18:43555095-43554932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
75-230
               

               
Cow position:
               
chr18:48717953-48717796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
78-188
               

               
Cow position:
               
chr18:55309488-55309378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
89, 106
               

               
Conread position:
               
78-230
               

               
Cow position:
               
chr18:29949737-29949894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
79-230
               

               
Cow position:
               
chr18:49940721-49940568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
86-250
               

               
Cow position:
               
chr18:36478330-36478496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
25-230
               

               
Cow position:
               
chr19:26003665-26003442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
42-209
               

               
Cow position:
               
chr19:3080429-3080613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-189
               

               
Cow position:
               
chr19:7839072-7838924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-211
               

               
Cow position:
               
chr19:32214770-32214949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 134
               

               
Conread position:
               
43-228
               

               
Cow position:
               
chr19:30935802-30935611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 134
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr19:12040593-12040790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
43-233
               

               
Cow position:
               
chr19:2342452-2342650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
44-231
               

               
Cow position:
               
chr19:5648695-5648499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
44-237
               

               
Cow position:
               
chr19:21285108-21284902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
46-201
               

               
Cow position:
               
chr19:4825010-4824844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
46-230
               

               
Cow position:
               
chr19:28842382-28842189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
51-245
               

               
Cow position:
               
chr19:3124065-3123874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
157, 40
               

               
Conread position:
               
52-230
               

               
Cow position:
               
chr19:2280662-2280475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
69-202
               

               
Cow position:
               
chr19:5986235-5986374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
70-270
               

               
Cow position:
               
chr19:38025694-38025903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
75-200
               

               
Cow position:
               
chr19:38871075-38871205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
75-202
               

               
Cow position:
               
chr19:7029926-7030056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
75-230
               

               
Cow position:
               
chr19:46497944-46498100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 99
               

               
Conread position:
               
75-252
               

               
Cow position:
               
chr19:46306331-46306153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
64, 118
               

               
Conread position:
               
76-229
               

               
Cow position:
               
chr19:9387643-9387805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
76-230
               

               
Cow position:
               
chr19:11759222-11759057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
79-230
               

               
Cow position:
               
chr19:56008713-56008559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
82-206
               

               
Cow position:
               
chr19:50786523-50786398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
100-230
               

               
Cow position:
               
chr19:35084110-35083975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
27-224
               

               
Cow position:
               
chr20:25146789-25146997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
42-233
               

               
Cow position:
               
chr20:13465533-13465734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 127
               

               
Conread position:
               
42-255
               

               
Cow position:
               
chr20:4934047-4933819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 131
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr20:10759450-10759249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
46-230
               

               
Cow position:
               
chr20:10838186-10837990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 141
               

               
Conread position:
               
47-230
               

               
Cow position:
               
chr20:7100815-7101011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
48-214
               

               
Cow position:
               
chr20:24849833-24850011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
48-231
               

               
Cow position:
               
chr20:4157449-4157642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
65-229
               

               
Cow position:
               
chr20:5763243-5763070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
69-211
               

               
Cow position:
               
chr20:17670238-17670384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr20:8261970-8262139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr20:15073781-15073605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr20:21236711-21236873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 115
               

               
Conread position:
               
69-233
               

               
Cow position:
               
chr20:6903368-6903541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
69-233
               

               
Cow position:
               
chr20:13609010-13608842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
75-206
               

               
Cow position:
               
chr20:32972611-32972742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
75-231
               

               
Cow position:
               
chr20:6105093-6104926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
84-230
               

               
Cow position:
               
chr20:24868945-24868794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
43-206
               

               
Cow position:
               
chr21:46607543-46607376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
43-214
               

               
Cow position:
               
chr21:19860124-19859940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr21:17428542-17428743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr21:31576540-31576734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr21:13418187-13417989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr21:25286560-25286762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-236
               

               
Cow position:
               
chr21:18941791-18941581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
43-236
               

               
Cow position:
               
chr21:22353191-22352984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
43-252
               

               
Cow position:
               
chr21:26753534-26753753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 175
               

               
Conread position:
               
45-229
               

               
Cow position:
               
chr21:33947204-33947010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
45-230
               

               
Cow position:
               
chr21:31662049-31662244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
25, 193
               

               
Conread position:
               
46-230
               

               
Cow position:
               
chr21:4098919-4099112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr21:47715468-47715299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
69-231
               

               
Cow position:
               
chr21:2413128-2413296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
69-231
               

               
Cow position:
               
chr21:22398237-22398394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 105
               

               
Conread position:
               
69-231
               

               
Cow position:
               
chr21:41197970-41197805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 54
               

               
Conread position:
               
69-235
               

               
Cow position:
               
chr21:4276527-4276354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 165
               

               
Conread position:
               
75-229
               

               
Cow position:
               
chr21:23801047-23800888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
75-252
               

               
Cow position:
               
chr21:25800481-25800663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
78-230
               

               
Cow position:
               
chr21:49661751-49661594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
42, 88
               

               
Conread position:
               
79-211
               

               
Cow position:
               
chr21:2458558-2458426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 107
               

               
Conread position:
               
41-231
               

               
Cow position:
               
chr22:15424110-15424315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
42-231
               

               
Cow position:
               
chr22:33386529-33386330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
43-206
               

               
Cow position:
               
chr22:4651153-4651330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-211
               

               
Cow position:
               
chr22:26760692-26760868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
43-222
               

               
Cow position:
               
chr22:26941770-26941959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr22:31192596-31192398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr22:34675500-34675698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
43-234
               

               
Cow position:
               
chr22:7301859-7301658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 135
               

               
Conread position:
               
43-248
               

               
Cow position:
               
chr22:30429595-30429806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 177
               

               
Conread position:
               
44-231
               

               
Cow position:
               
chr22:7287487-7287692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
53-208
               

               
Cow position:
               
chr22:23270354-23270194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
66-242
               

               
Cow position:
               
chr22:44468809-44468996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
69-224
               

               
Cow position:
               
chr22:18339932-18339770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
69-226
               

               
Cow position:
               
chr22:13187891-13188054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
69-233
               

               
Cow position:
               
chr22:41389116-41389289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
69-237
               

               
Cow position:
               
chr22:5927950-5927779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
111, 66
               

               
Conread position:
               
69-237
               

               
Cow position:
               
chr22:22999602-22999767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
75, 141
               

               
Conread position:
               
69-248
               

               
Cow position:
               
chr22:5622708-5622534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 97
               

               
Conread position:
               
71-202
               

               
Cow position:
               
chr22:22210227-22210097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 113
               

               
Conread position:
               
75-218
               

               
Cow position:
               
chr22:37554499-37554349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
75-229
               

               
Cow position:
               
chr22:31496978-31496821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
75-230
               

               
Cow position:
               
chr22:41245269-41245429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
78-224
               

               
Cow position:
               
chr22:139283-139139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
78-230
               

               
Cow position:
               
chr22:32690422-32690262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 90
               

               
Conread position:
               
82-231
               

               
Cow position:
               
chr22:19069110-19069265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
83-230
               

               
Cow position:
               
chr22:31512780-31512629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr22:30520944-30521169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr23:21847735-21847907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr23:37224085-37223921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
42-230
               

               
Cow position:
               
chr23:28721251-28721053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr23:8930155-8929948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr23:30307890-30308093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr23:21866724-21866893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
43-211
               

               
Cow position:
               
chr23:11434275-11434100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-229
               

               
Cow position:
               
chr23:6683730-6683927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 188
               

               
Conread position:
               
43-229
               

               
Cow position:
               
chr23:26217547-26217739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr23:14840528-14840325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
43-239
               

               
Cow position:
               
chr23:16793568-16793774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
44-201
               

               
Cow position:
               
chr23:38941605-38941772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
44-226
               

               
Cow position:
               
chr23:13359810-13360007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
45-231
               

               
Cow position:
               
chr23:29272099-29272297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
69-202
               

               
Cow position:
               
chr23:347731-347597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 89
               

               
Conread position:
               
69-202
               

               
Cow position:
               
chr23:40651459-40651320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
69-229
               

               
Cow position:
               
chr23:35362763-35362607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
71-252
               

               
Cow position:
               
chr23:28701003-28701194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
75-211
               

               
Cow position:
               
chr23:39117981-39117848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 40
               

               
Conread position:
               
76-202
               

               
Cow position:
               
chr23:5389722-5389851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
76-206
               

               
Cow position:
               
chr23:35155396-35155530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
76-225
               

               
Cow position:
               
chr23:17000728-17000877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 128
               

               
Conread position:
               
81-200
               

               
Cow position:
               
chr23:40609395-40609516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
93-246
               

               
Cow position:
               
chr23:30736109-30735946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
108-223
               

               
Cow position:
               
chr23:16072292-16072173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
42-254
               

               
Cow position:
               
chr24:19754531-19754749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
43-199
               

               
Cow position:
               
chr24:7079748-7079904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr24:2143710-2143874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr24:15617514-15617350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
43-214
               

               
Cow position:
               
chr24:39681811-39681985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
43-219
               

               
Cow position:
               
chr24:26455798-26455988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
43-226
               

               
Cow position:
               
chr24:35827693-35827886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
43-227
               

               
Cow position:
               
chr24:6507811-6507615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr24:23176742-23176543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
23, 181
               

               
Conread position:
               
43-235
               

               
Cow position:
               
chr24:34369051-34368844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 131
               

               
Conread position:
               
43-238
               

               
Cow position:
               
chr24:33290358-33290152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
43-251
               

               
Cow position:
               
chr24:28279580-28279801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 196
               

               
Conread position:
               
43-251
               

               
Cow position:
               
chr24:39742771-39742989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 196
               

               
Conread position:
               
43-252
               

               
Cow position:
               
chr24:18786961-18786747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr24:39350259-39350067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
46-231
               

               
Cow position:
               
chr24:43359794-43359982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
50-202
               

               
Cow position:
               
chr24:25677994-25678149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
65-230
               

               
Cow position:
               
chr24:44074471-44074301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
67-230
               

               
Cow position:
               
chr24:27054396-27054564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
69-198
               

               
Cow position:
               
chr24:12452772-12452905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 56
               

               
Conread position:
               
69-202
               

               
Cow position:
               
chr24:16055524-16055386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr24:6427692-6427861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
75-225
               

               
Cow position:
               
chr24:14617654-14617811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
77-230
               

               
Cow position:
               
chr24:38291855-38292013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
86-225
               

               
Cow position:
               
chr24:42916377-42916235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
28-206
               

               
Cow position:
               
chr25:41094172-41093986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
42-189
               

               
Cow position:
               
chr25:22909880-22909728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
42-235
               

               
Cow position:
               
chr25:36501259-36501057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr25:13560234-13560067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr25:26240517-26240686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr25:14570352-14570546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr25:24405756-24405553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
43-246
               

               
Cow position:
               
chr25:40957007-40956792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 210
               

               
Conread position:
               
45-206
               

               
Cow position:
               
chr25:27534938-27534767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
45-230
               

               
Cow position:
               
chr25:33111988-33111806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
53-202
               

               
Cow position:
               
chr25:20885091-20884941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
55-206
               

               
Cow position:
               
chr25:18161285-18161434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
69-214
               

               
Cow position:
               
chr25:5365538-5365696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
69-225
               

               
Cow position:
               
chr25:13321191-13321353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr25:12932635-12932805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 100
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr25:18448822-18448990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
70-206
               

               
Cow position:
               
chr25:14075314-14075454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
75-230
               

               
Cow position:
               
chr25:26457662-26457497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
77-224
               

               
Cow position:
               
chr25:10748483-10748333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 127
               

               
Conread position:
               
78-202
               

               
Cow position:
               
chr25:8080746-8080873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
79-231
               

               
Cow position:
               
chr25:27534666-27534516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
80-202
               

               
Cow position:
               
chr25:20614745-20614870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
82-230
               

               
Cow position:
               
chr25:9109364-9109519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
83-225
               

               
Cow position:
               
chr25:33222666-33222807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
84-230
               

               
Cow position:
               
chr25:24136417-24136265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
86-225
               

               
Cow position:
               
chr25:18228204-18228351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
42-199
               

               
Cow position:
               
chr26:12580014-12579851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr26:18719253-18719420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
43-212
               

               
Cow position:
               
chr26:19935360-19935184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
43-214
               

               
Cow position:
               
chr26:7955849-7956031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-214
               

               
Cow position:
               
chr26:8651607-8651427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
43-223
               

               
Cow position:
               
chr26:12669196-12669390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
43-246
               

               
Cow position:
               
chr26:31466679-31466889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
43-254
               

               
Cow position:
               
chr26:21859820-21860033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr26:16604284-16604478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
25, 180
               

               
Conread position:
               
49-229
               

               
Cow position:
               
chr26:10137738-10137544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
51-203
               

               
Cow position:
               
chr26:19768795-19768638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
53-229
               

               
Cow position:
               
chr26:24183036-24182855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
59-202
               

               
Cow position:
               
chr26:7162392-7162245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
64-230
               

               
Cow position:
               
chr26:9632341-9632165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
69-202
               

               
Cow position:
               
chr26:9102081-9101946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
69-206
               

               
Cow position:
               
chr26:17204116-17203974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr26:12520056-12520227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
69-248
               

               
Cow position:
               
chr26:10292626-10292813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 137
               

               
Conread position:
               
75-214
               

               
Cow position:
               
chr26:7387801-7387945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
77-202
               

               
Cow position:
               
chr26:12652208-12652078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
80-228
               

               
Cow position:
               
chr26:19110953-19111109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
101-214
               

               
Cow position:
               
chr26:16576988-16576873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
41-240
               

               
Cow position:
               
chr27:29038962-29039175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 158
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr27:19083739-19083910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr27:27053271-27053080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr27:1536743-1536954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chr27:21578597-21578802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
44-206
               

               
Cow position:
               
chr27:6454184-6454011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
45-209
               

               
Cow position:
               
chr27:14937455-14937630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 135
               

               
Conread position:
               
45-212
               

               
Cow position:
               
chr27:26441082-26441256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
46-229
               

               
Cow position:
               
chr27:13958370-13958567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 194
               

               
Conread position:
               
46-230
               

               
Cow position:
               
chr27:24224926-24225122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
49-231
               

               
Cow position:
               
chr27:8048769-8048958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
69-202
               

               
Cow position:
               
chr27:11746533-11746395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
69-231
               

               
Cow position:
               
chr27:27049966-27050132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 50
               

               
Conread position:
               
77-230
               

               
Cow position:
               
chr27:24341841-24341677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 162
               

               
Conread position:
               
79-229
               

               
Cow position:
               
chr27:17875207-17875367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
84-230
               

               
Cow position:
               
chr27:1899642-1899796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 152
               

               
Conread position:
               
103-229
               

               
Cow position:
               
chr27:6642249-6642384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr28:3769680-3769516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chr28:8335946-8336116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
43-206
               

               
Cow position:
               
chr28:15677870-15678045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
43-224
               

               
Cow position:
               
chr28:5979907-5980098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr28:20275114-20275319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
43-246
               

               
Cow position:
               
chr28:20963545-20963323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
43-257
               

               
Cow position:
               
chr28:33285126-33284899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
44-202
               

               
Cow position:
               
chr28:25340258-25340424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr28:7540172-7539984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr28:31165997-31165794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
44-233
               

               
Cow position:
               
chr28:15081935-15081736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
44-251
               

               
Cow position:
               
chr28:1202255-1202036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
45-231
               

               
Cow position:
               
chr28:6643296-6643092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
45-231
               

               
Cow position:
               
chr28:19253469-19253666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
50-231
               

               
Cow position:
               
chr28:4763878-4764065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
50-231
               

               
Cow position:
               
chr28:23668784-23668597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
64-227
               

               
Cow position:
               
chr28:22421973-22421808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
69-225
               

               
Cow position:
               
chr28:11181146-11180983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr28:25825846-25825678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
69-239
               

               
Cow position:
               
chr28:7805406-7805228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
72-211
               

               
Cow position:
               
chr28:11007220-11007367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
76-230
               

               
Cow position:
               
chr28:15406084-15406241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 91
               

               
Conread position:
               
80-201
               

               
Cow position:
               
chr28:28640889-28641009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
83-230
               

               
Cow position:
               
chr28:22331088-22331238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
86-231
               

               
Cow position:
               
chr28:3823106-3822952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
98-230
               

               
Cow position:
               
chr28:27987920-27988053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
31-202
               

               
Cow position:
               
chr29:22895692-22895875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
42-233
               

               
Cow position:
               
chr29:18695229-18695427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 131
               

               
Conread position:
               
43-200
               

               
Cow position:
               
chr29:650259-650413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
43-206
               

               
Cow position:
               
chr29:26298952-26299121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
43-207
               

               
Cow position:
               
chr29:21265740-21265913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 130
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr29:29302681-29302483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 196
               

               
Conread position:
               
44-190
               

               
Cow position:
               
chr29:7054398-7054546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr29:18021699-18021502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
45-201
               

               
Cow position:
               
chr29:4367705-4367870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
45-230
               

               
Cow position:
               
chr29:942611-942801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
46-229
               

               
Cow position:
               
chr29:5616888-5616688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
51-178
               

               
Cow position:
               
chr29:9938094-9937960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
65-202
               

               
Cow position:
               
chr29:19607519-19607377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
65-207
               

               
Cow position:
               
chr29:29559714-29559569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
68-236
               

               
Cow position:
               
chr29:15042458-15042628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 28
               

               
Conread position:
               
69-201
               

               
Cow position:
               
chr29:21675405-21675537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 40
               

               
Conread position:
               
69-251
               

               
Cow position:
               
chr29:13127113-13126926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 155
               

               
Conread position:
               
72-230
               

               
Cow position:
               
chr29:23742249-23742085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
77-242
               

               
Cow position:
               
chr29:2274822-2274650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
78-233
               

               
Cow position:
               
chr29:6772151-6772315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 88
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr9:26093417-26093207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
24-226
               

               
Cow position:
               
chr9:38192817-38192620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
31-206
               

               
Cow position:
               
chr9:53794468-53794652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
42-202
               

               
Cow position:
               
chr9:55562551-55562376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
42-326
               

               
Cow position:
               
chr9:21462819-21463105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
43-188
               

               
Cow position:
               
chr9:3932010-3931858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
43-201
               

               
Cow position:
               
chr9:10666976-10667140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
43-201
               

               
Cow position:
               
chr9:27292230-27292398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
43-201
               

               
Cow position:
               
chr9:32817092-32817261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-206
               

               
Cow position:
               
chr9:9200674-9200846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr9:43037532-43037329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
43-234
               

               
Cow position:
               
chr9:17110818-17110616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
43-248
               

               
Cow position:
               
chr9:39428750-39428971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
43-249
               

               
Cow position:
               
chr9:15033952-15033741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
43-252
               

               
Cow position:
               
chr9:24837585-24837371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 194
               

               
Conread position:
               
44-211
               

               
Cow position:
               
chr9:34725465-34725642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
45-202
               

               
Cow position:
               
chr9:35708575-35708739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
45-231
               

               
Cow position:
               
chr9:34310071-34309874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
24, 6
               

               
Conread position:
               
45-245
               

               
Cow position:
               
chr9:34204177-34203959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
45-254
               

               
Cow position:
               
chr9:8617856-8617654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
46-230
               

               
Cow position:
               
chr9:12499057-12498857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
47-211
               

               
Cow position:
               
chr9:3959105-3958940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
47-252
               

               
Cow position:
               
chr9:15684742-15684962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
50-230
               

               
Cow position:
               
chr9:37099197-37099377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
59-229
               

               
Cow position:
               
chr9:9315333-9315158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
65-219
               

               
Cow position:
               
chr9:47925946-47925786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
69-211
               

               
Cow position:
               
chr9:2863461-2863315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr9:5340627-5340464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
69-237
               

               
Cow position:
               
chr9:4538842-4539019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
69-251
               

               
Cow position:
               
chr9:34568697-34568874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
115, 45
               

               
Conread position:
               
71-231
               

               
Cow position:
               
chr9:20200309-20200147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
75-236
               

               
Cow position:
               
chr9:5209592-5209424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
77-252
               

               
Cow position:
               
chr9:62330988-62331171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 158
               

               
Conread position:
               
78-230
               

               
Cow position:
               
chr9:33668738-33668571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
79-230
               

               
Cow position:
               
chr9:26645929-26645767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
453-754
               

               
Cow position:
               
chr9:26092956-26092646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 210
               

               
Conread position:
               
16-230
               

               
Cow position:
               
chrX:6041229-6041005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
29-202
               

               
Cow position:
               
chrX:29761692-29761507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
41-251
               

               
Cow position:
               
chrX:630305-630086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 168
               

               
Conread position:
               
43-197
               

               
Cow position:
               
chrX:16419157-16419318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
43-199
               

               
Cow position:
               
chrX:31340717-31340884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
43-202
               

               
Cow position:
               
chrX:2300932-2301101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
43-203
               

               
Cow position:
               
chrX:31602664-31602835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-214
               

               
Cow position:
               
chrX:28787360-28787534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
43-216
               

               
Cow position:
               
chrX:17042695-17042871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
94, 160
               

               
Conread position:
               
43-223
               

               
Cow position:
               
chrX:39545969-39545788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
43-224
               

               
Cow position:
               
chrX:6563530-6563721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
43-224
               

               
Cow position:
               
chrX:25388231-25388048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
43-226
               

               
Cow position:
               
chrX:39415364-39415164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chrX:29874364-29874163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 197
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chrX:27287726-27287528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
43-231
               

               
Cow position:
               
chrX:38999862-39000059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
43-235
               

               
Cow position:
               
chrX:20376977-20377179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
26, 109
               

               
Conread position:
               
43-235
               

               
Cow position:
               
chrX:21664713-21664510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
44-200
               

               
Cow position:
               
chrX:37760894-37761045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
44-229
               

               
Cow position:
               
chrX:36009905-36009707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
45-206
               

               
Cow position:
               
chrX:41083923-41084097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
45-230
               

               
Cow position:
               
chrX:24132142-24131949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 187
               

               
Conread position:
               
46-214
               

               
Cow position:
               
chrX:17964513-17964332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
46-237
               

               
Cow position:
               
chrX:18142437-18142245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
48-234
               

               
Cow position:
               
chrX:40789223-40789416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
48-237
               

               
Cow position:
               
chrX:15049506-15049699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
49-233
               

               
Cow position:
               
chrX:12304573-12304773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 189
               

               
Conread position:
               
69-201
               

               
Cow position:
               
chrX:10289588-10289452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
69-207
               

               
Cow position:
               
chrX:16291981-16291839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
69-225
               

               
Cow position:
               
chrX:7497281-7497438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 94
               

               
Conread position:
               
69-231
               

               
Cow position:
               
chrX:2786518-2786354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 126
               

               
Conread position:
               
69-236
               

               
Cow position:
               
chrX:25338226-25338399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
67, 163
               

               
Conread position:
               
69-253
               

               
Cow position:
               
chrX:39339067-39338873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
70-237
               

               
Cow position:
               
chrX:43426334-43426507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
75-232
               

               
Cow position:
               
chrX:15305255-15305084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
75-252
               

               
Cow position:
               
chrX:22326164-22326346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 170
               

               
Conread position:
               
81-230
               

               
Cow position:
               
chrX:488729-488885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
82-214
               

               
Cow position:
               
chrX:8103237-8103099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
84-231
               

               
Cow position:
               
chrX:22284936-22285081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
86-230
               

               
Cow position:
               
chrX:19678216-19678070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 0