Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10088C11.5 |
| Conread position: | 3-85 |
| Cow position: | chr1:55707536-55707618 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1210-1454 |
| Cow position: | chr10:54691977-54691731 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 145 |
| Conread position: | 1289-1474 |
| Cow position: | chr13:1318272-1318093 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 125, 32 |
| Conread position: | 2-2328 |
| Cow position: | chr15:8817098-8819407 (view UCSC Genome Browser custom track) |
| Alignm length: | 2348 |
| Alignm identity: | 2173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1915, 1353 |
| Conread position: | 170-820 |
| Cow position: | chr19:30570933-30571599 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 415 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 178, 64 |
| Conread position: | 251-436 |
| Cow position: | chr21:1322986-1323174 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 430-537 |
| Cow position: | chr21:1325115-1325222 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 760-1008 |
| Cow position: | chr21:1327284-1327531 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 1-80 |
| Cow position: | chr25:11515594-11515673 (view UCSC Genome Browser custom track) |
| Alignm length: | 80 |
| Alignm identity: | 78 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 734-1475 |
| Cow position: | chr27:3756755-3757475 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 611 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 3-79 |
| Cow position: | chr3:64421644-64421720 (view UCSC Genome Browser custom track) |
| Alignm length: | 77 |
| Alignm identity: | 75 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-112 |
| Cow position: | chr5:33770454-33770344 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 111-253 |
| Cow position: | chr5:33769369-33769227 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 141 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 252-439 |
| Cow position: | chr5:33769096-33768909 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 430-537 |
| Cow position: | chr5:33766835-33766728 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 527-765 |
| Cow position: | chr5:33766048-33765810 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 763-879 |
| Cow position: | chr5:33763532-33763416 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 114 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 879-997 |
| Cow position: | chr5:33762397-33762279 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 117 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 994-1104 |
| Cow position: | chr5:33761985-33761875 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1091-1722 |
| Cow position: | chr5:33761167-33760542 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 265 |
| Conread position: | 1569-1719 |
| Cow position: | chr5:23136023-23136172 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 126, 59 |
| Conread position: | 1838-2328 |
| Cow position: | chr5:33760577-33760077 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 68 |
| Conread position: | 424-1222 |
| Cow position: | chr8:46486715-46487517 (view UCSC Genome Browser custom track) |
| Alignm length: | 807 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 467, 458 |
| Conread position: | 1103-1467 |
| Cow position: | chr9:47822729-47823076 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 25 |