Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10200E08.5 |
| Conread position: | 411-693 |
| Cow position: | chr11:16987111-16986825 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 168 |
| Conread position: | 411-708 |
| Cow position: | chr11:30157787-30157490 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 117, 16 |
| Conread position: | 412-769 |
| Cow position: | chr11:3254162-3253809 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 476-796 |
| Cow position: | chr11:13581788-13581466 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 52, 81 |
| Conread position: | 477-851 |
| Cow position: | chr11:9269207-9269587 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 66 |
| Conread position: | 487-796 |
| Cow position: | chr11:35228795-35228509 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 504-799 |
| Cow position: | chr11:9232857-9233138 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 412-852 |
| Cow position: | chr14:40772547-40772972 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 411-710 |
| Cow position: | chr15:53579261-53578967 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 411-808 |
| Cow position: | chr15:20837635-20838031 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 76, 100 |
| Conread position: | 492-848 |
| Cow position: | chr15:35578862-35578509 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 71 |
| Conread position: | 496-799 |
| Cow position: | chr17:14078898-14078596 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 411-709 |
| Cow position: | chr18:29748303-29748011 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 72, 122 |
| Conread position: | 411-852 |
| Cow position: | chr18:25992853-25993305 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 67, 116 |
| Conread position: | 412-713 |
| Cow position: | chr18:31017-31314 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 72, 34 |
| Conread position: | 472-852 |
| Cow position: | chr18:29899893-29900281 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 16, 64 |
| Conread position: | 512-800 |
| Cow position: | chr18:48301732-48301452 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 140, 5 |
| Conread position: | 512-852 |
| Cow position: | chr18:6065157-6064819 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 411-852 |
| Cow position: | chr19:29390622-29391053 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 300 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 22, 169 |
| Conread position: | 365-852 |
| Cow position: | chr2:5891132-5890649 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 146 |
| Conread position: | 411-722 |
| Cow position: | chr2:50456928-50456625 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 120, 78 |
| Conread position: | 411-852 |
| Cow position: | chr2:52651854-52652296 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 104 |
| Conread position: | 415-840 |
| Cow position: | chr2:43713653-43714070 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 111, 38 |
| Conread position: | 417-811 |
| Cow position: | chr2:20027744-20028146 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 111, 155 |
| Conread position: | 425-850 |
| Cow position: | chr2:1993970-1993541 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 287 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 109, 42 |
| Conread position: | 411-559 |
| Cow position: | chr20:1016102-1015950 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 143 |
| Conread position: | 412-705 |
| Cow position: | chr20:24480362-24480655 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 76 |
| Conread position: | 411-814 |
| Cow position: | chr21:21031328-21031726 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 64 |
| Conread position: | 511-840 |
| Cow position: | chr21:4297880-4298213 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 411-794 |
| Cow position: | chr25:21544596-21544968 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 113, 75 |
| Conread position: | 428-624 |
| Cow position: | chr28:30438671-30438867 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 60, 150 |
| Conread position: | 412-585 |
| Cow position: | chr29:39314718-39314539 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 169 |
| Conread position: | 411-796 |
| Cow position: | chr3:78018838-78019221 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 63 |
| Conread position: | 411-852 |
| Cow position: | chr3:25788645-25788222 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 99, 51 |
| Conread position: | 448-843 |
| Cow position: | chr3:25500365-25499967 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 5, 109 |
| Conread position: | 413-852 |
| Cow position: | chr4:47148183-47148633 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 77, 173 |
| Conread position: | 436-800 |
| Cow position: | chr4:21881577-21881221 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 436-810 |
| Cow position: | chr4:49892769-49893143 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 207, 129 |
| Conread position: | 495-843 |
| Cow position: | chr4:64982659-64982999 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 513-839 |
| Cow position: | chr4:42904780-42905102 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 5, 56 |
| Conread position: | 411-799 |
| Cow position: | chr5:57235495-57235882 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 73, 165 |
| Conread position: | 411-851 |
| Cow position: | chr5:41574149-41574579 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 182, 6 |
| Conread position: | 415-745 |
| Cow position: | chr5:68493420-68493101 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 71 |
| Conread position: | 497-849 |
| Cow position: | chr5:65341145-65340791 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 411-745 |
| Cow position: | chr6:50138005-50138344 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 29, 170 |
| Conread position: | 414-800 |
| Cow position: | chr6:61079922-61079536 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 74, 31 |
| Conread position: | 392-842 |
| Cow position: | chr7:32190010-32189569 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 412-723 |
| Cow position: | chr7:986489-986795 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 15 |
| Conread position: | 414-811 |
| Cow position: | chr7:28635124-28635519 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 69, 53 |
| Conread position: | 446-843 |
| Cow position: | chr7:32191840-32191445 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 263 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 11, 131 |
| Conread position: | 412-713 |
| Cow position: | chr8:8302042-8301748 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 80, 90 |
| Conread position: | 413-636 |
| Cow position: | chr9:12390667-12390444 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 71, 159 |
| Conread position: | 511-811 |
| Cow position: | chr9:34440005-34439705 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 517-799 |
| Cow position: | chr9:42824550-42824269 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 411-808 |
| Cow position: | chrX:23882753-23882380 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 57, 68 |
| Conread position: | 414-814 |
| Cow position: | chrX:17885886-17886277 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 116, 132 |