Cow genome map
| Conread name: | Ss1.1-Ova2-C0003272_A09.5 |
| Conread position: | 15-536 |
| Cow position: | chr1:69181933-69182440 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 13 |
| Conread position: | 15-545 |
| Cow position: | chr1:70202821-70203336 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 522, 13 |
| Conread position: | 298-516 |
| Cow position: | chr10:44457490-44457286 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 367-484 |
| Cow position: | chr13:1619104-1618987 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-249 |
| Cow position: | chr16:7128533-7128771 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 40, 61 |
| Conread position: | 66-557 |
| Cow position: | chr16:7130098-7130600 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 82 |
| Conread position: | 1-484 |
| Cow position: | chr17:38408576-38408101 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 77 |
| Conread position: | 277-477 |
| Cow position: | chr17:42690033-42689829 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 277-477 |
| Cow position: | chr17:42737742-42737538 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-160 |
| Cow position: | chr22:10081904-10082063 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 140 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-460 |
| Cow position: | chr22:19410709-19410255 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 8 |
| Conread position: | 2-434 |
| Cow position: | chr22:840462-840038 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 77 |
| Conread position: | 158-288 |
| Cow position: | chr22:10082810-10082940 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-452 |
| Cow position: | chr22:10083058-10083223 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 445-557 |
| Cow position: | chr22:10083324-10083436 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 277-543 |
| Cow position: | chr23:30246375-30246645 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 3-489 |
| Cow position: | chr24:17028053-17027571 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 0 |
| Conread position: | 20-498 |
| Cow position: | chr25:2096134-2095691 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 453, 33 |
| Conread position: | 1-557 |
| Cow position: | chr28:17580245-17580783 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 22-341 |
| Cow position: | chr28:27243981-27243665 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 26-381 |
| Cow position: | chr28:20001559-20001896 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 58 |
| Conread position: | 1-215 |
| Cow position: | chr29:45632770-45632564 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 278-484 |
| Cow position: | chr29:45632105-45631901 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 55-557 |
| Cow position: | chr3:13439746-13439243 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 108-545 |
| Cow position: | chr3:23874580-23874149 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 166 |
| Conread position: | 157-545 |
| Cow position: | chr3:41697843-41698232 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 310-557 |
| Cow position: | chr3:58277837-58278091 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 3-231 |
| Cow position: | chr4:42104814-42105036 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 154-427 |
| Cow position: | chr4:4973797-4973529 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 154-557 |
| Cow position: | chr5:32566769-32567170 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 0 |
| Conread position: | 298-557 |
| Cow position: | chr5:12262034-12261784 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-385 |
| Cow position: | chr8:49967510-49967132 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 57, 178 |
| Conread position: | 1-124 |
| Cow position: | chrX:486745-486868 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 108-560 |
| Cow position: | chrX:486873-487314 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |