Cow genome map
| Conread name: | Ss1.1-Ova2-C0003275_A02.5 |
| Conread position: | 133-540 |
| Cow position: | chr1:79355629-79355226 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 138-539 |
| Cow position: | chr1:51714635-51715021 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 137 |
| Conread position: | 132-540 |
| Cow position: | chr10:25254186-25254594 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-540 |
| Cow position: | chr10:14607829-14607426 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 120-536 |
| Cow position: | chr11:51787084-51786673 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 131-540 |
| Cow position: | chr11:75621217-75620811 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 274-493 |
| Cow position: | chr11:125133-124923 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 189, 35 |
| Conread position: | 271-385 |
| Cow position: | chr12:18189967-18189853 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-536 |
| Cow position: | chr12:18189343-18189194 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 131 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 131-540 |
| Cow position: | chr15:34128662-34128264 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 131-540 |
| Cow position: | chr19:40215327-40215728 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 24 |
| Conread position: | 131-540 |
| Cow position: | chr22:11064943-11065352 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 131-540 |
| Cow position: | chr22:31601907-31601498 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 131-430 |
| Cow position: | chr23:13920643-13920937 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 131-537 |
| Cow position: | chr23:7549865-7550283 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 188 |
| Conread position: | 131-540 |
| Cow position: | chr23:13676452-13676856 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 131-538 |
| Cow position: | chr26:12405627-12406035 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 14 |
| Conread position: | 131-540 |
| Cow position: | chr26:6850090-6849682 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 131-278 |
| Cow position: | chr27:21167603-21167456 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 81, 50 |
| Conread position: | 268-517 |
| Cow position: | chr27:21167197-21166961 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 126-381 |
| Cow position: | chr28:22287400-22287146 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 279-529 |
| Cow position: | chr28:17192658-17192405 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 246-540 |
| Cow position: | chr3:76918210-76918504 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 136-446 |
| Cow position: | chr4:30943834-30943528 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 131-540 |
| Cow position: | chr5:38885189-38885592 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 154 |
| Conread position: | 273-504 |
| Cow position: | chr5:67563976-67563751 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 291-538 |
| Cow position: | chr8:20211157-20210920 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 139-540 |
| Cow position: | chr9:34104094-34103697 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 29 |
| Conread position: | 126-540 |
| Cow position: | chrX:14263133-14262719 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |