Cow genome map
| Conread name: | Ss1.1-Pig1-131G21.5 |
| Conread position: | 50-476 |
| Cow position: | chr14:433815-434229 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 129, 123 |
| Conread position: | 36-341 |
| Cow position: | chr17:44467935-44468234 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 36-336 |
| Cow position: | chr18:56391187-56390893 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 38-237 |
| Cow position: | chr18:55497292-55497093 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-201 |
| Cow position: | chr2:71796653-71796852 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-268 |
| Cow position: | chr2:78800179-78800438 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 0 |
| Conread position: | 199-280 |
| Cow position: | chr2:71807368-71807449 (view UCSC Genome Browser custom track) |
| Alignm length: | 82 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 265-443 |
| Cow position: | chr2:71807535-71807713 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 439-871 |
| Cow position: | chr2:71810928-71811363 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 177 |
| Conread position: | 25-460 |
| Cow position: | chr21:12659399-12659822 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 177, 163 |
| Conread position: | 36-321 |
| Cow position: | chr21:12658990-12659269 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 36-321 |
| Cow position: | chr21:12659158-12659437 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 158, 152 |
| Conread position: | 38-485 |
| Cow position: | chr21:12659244-12659679 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 156, 150 |
| Conread position: | 50-484 |
| Cow position: | chr21:12659088-12659507 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 47 |
| Conread position: | 35-476 |
| Cow position: | chr25:25652512-25652941 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 415, 198 |
| Conread position: | 36-331 |
| Cow position: | chr25:25652345-25652634 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 260, 203 |
| Conread position: | 36-331 |
| Cow position: | chr25:25652933-25653222 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 166, 145 |
| Conread position: | 36-346 |
| Cow position: | chr25:33530470-33530774 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 36-485 |
| Cow position: | chr25:3664004-3664441 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 409, 197 |
| Conread position: | 36-485 |
| Cow position: | chr25:25652765-25653202 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 408, 198 |
| Conread position: | 38-292 |
| Cow position: | chr25:3664258-3664506 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 38-479 |
| Cow position: | chr25:3664174-3664603 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 166, 153 |
| Conread position: | 50-485 |
| Cow position: | chr25:3663934-3664357 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 394, 185 |
| Conread position: | 50-485 |
| Cow position: | chr25:25652191-25652614 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 37, 46 |
| Conread position: | 52-348 |
| Cow position: | chr25:25653033-25653323 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 52-460 |
| Cow position: | chr25:25652277-25652673 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 254, 181 |
| Conread position: | 2-382 |
| Cow position: | chr28:34696032-34696409 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 8, 40 |
| Conread position: | 8-199 |
| Cow position: | chr5:61397987-61397796 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-198 |
| Cow position: | chr5:61397104-61396925 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 266-443 |
| Cow position: | chr5:61394572-61394394 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 11-331 |
| Cow position: | chr6:49428276-49428590 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 12-485 |
| Cow position: | chr6:49428445-49428906 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 166, 161 |
| Conread position: | 37-321 |
| Cow position: | chr6:49428722-49429000 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 62 |
| Conread position: | 37-341 |
| Cow position: | chr6:49428890-49429188 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 63 |
| Conread position: | 52-341 |
| Cow position: | chr7:12293605-12293888 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 39-452 |
| Cow position: | chrX:14181400-14180997 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 49 |