Cow genome map
| Conread name: | Ss1.1-Pig1-90F05.5 |
| Conread position: | 434-556 |
| Cow position: | chr16:14627248-14627126 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 434-597 |
| Cow position: | chr17:22473335-22473498 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 141, 120 |
| Conread position: | 435-556 |
| Cow position: | chr17:22473756-22473877 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 448-575 |
| Cow position: | chr18:43175004-43174877 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-558 |
| Cow position: | chr19:20678374-20678497 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 435-564 |
| Cow position: | chr19:20678542-20678671 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-564 |
| Cow position: | chr22:14430130-14430280 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 71, 8 |
| Conread position: | 446-597 |
| Cow position: | chr22:14430078-14430229 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 35, 52 |
| Conread position: | 448-597 |
| Cow position: | chr22:14468409-14468558 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 434-595 |
| Cow position: | chr24:17078010-17077849 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 125, 152 |
| Conread position: | 97-227 |
| Cow position: | chr4:42316298-42316168 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-597 |
| Cow position: | chr4:42315571-42315210 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 0 |
| Conread position: | 446-596 |
| Cow position: | chr4:42314689-42314540 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 126, 68 |
| Conread position: | 446-597 |
| Cow position: | chr4:42314018-42313870 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 139, 92 |
| Conread position: | 446-597 |
| Cow position: | chr4:42314438-42314288 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 446-597 |
| Cow position: | chr4:42315109-42314958 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 216-591 |
| Cow position: | chr7:11435190-11434814 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 24 |
| Conread position: | 216-597 |
| Cow position: | chr7:8277041-8277422 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 280 |
| Conread position: | 216-597 |
| Cow position: | chr7:8324514-8324895 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 103 |
| Conread position: | 242-421 |
| Cow position: | chr7:8241490-8241669 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 408-596 |
| Cow position: | chr7:8242942-8243128 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 158, 26 |
| Conread position: | 408-597 |
| Cow position: | chr7:8243781-8243968 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 434-556 |
| Cow position: | chr7:8325992-8326114 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 434-597 |
| Cow position: | chr7:8277679-8277842 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 132, 146 |
| Conread position: | 434-597 |
| Cow position: | chr7:8325488-8325651 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-556 |
| Cow position: | chr7:8324985-8325106 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-597 |
| Cow position: | chr7:8278100-8278262 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-597 |
| Cow position: | chr7:8325825-8325987 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-597 |
| Cow position: | chr7:11434487-11434325 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 446-561 |
| Cow position: | chr7:8243146-8243260 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 446-595 |
| Cow position: | chr7:8277859-8278008 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 446-597 |
| Cow position: | chr7:8324828-8324979 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 36, 40 |
| Conread position: | 446-597 |
| Cow position: | chr7:8325248-8325399 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 446-597 |
| Cow position: | chr7:8325752-8325903 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 112, 131 |
| Conread position: | 448-595 |
| Cow position: | chr7:8325082-8325229 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 448-597 |
| Cow position: | chr7:8325334-8325483 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-597 |
| Cow position: | chrX:12626935-12627433 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 446-557 |
| Cow position: | chrX:12627533-12627644 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 446-575 |
| Cow position: | chrX:12627952-12628081 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 0, 0 |