Cow genome map
| Conread name: | Ss1.1-Pig1-97N16.5 |
| Conread position: | 1-353 |
| Cow position: | chr1:51274440-51274093 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 55 |
| Conread position: | 146-314 |
| Cow position: | chr1:33631979-33632147 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 35, 109 |
| Conread position: | 112-277 |
| Cow position: | chr10:36875450-36875284 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 5 |
| Conread position: | 112-293 |
| Cow position: | chr10:8770915-8771102 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 32 |
| Conread position: | 113-269 |
| Cow position: | chr10:54733496-54733338 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 157-372 |
| Cow position: | chr10:40438343-40438564 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 97-315 |
| Cow position: | chr11:41194753-41194971 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 162-317 |
| Cow position: | chr11:53674405-53674562 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 21, 141 |
| Conread position: | 186-352 |
| Cow position: | chr14:5461358-5461194 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 139-313 |
| Cow position: | chr15:20832848-20833028 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 42, 170 |
| Conread position: | 139-318 |
| Cow position: | chr15:13566413-13566596 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 198-310 |
| Cow position: | chr15:27556476-27556364 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 101-313 |
| Cow position: | chr16:46418824-46419037 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 39 |
| Conread position: | 112-318 |
| Cow position: | chr16:38719600-38719390 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 139-320 |
| Cow position: | chr16:24558772-24558590 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 63 |
| Conread position: | 140-315 |
| Cow position: | chr16:22099989-22099812 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 121 |
| Conread position: | 184-320 |
| Cow position: | chr16:93865-93727 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 192-321 |
| Cow position: | chr16:38514402-38514532 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 103 |
| Conread position: | 193-350 |
| Cow position: | chr16:30643298-30643451 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 130 |
| Conread position: | 140-320 |
| Cow position: | chr17:35142204-35142390 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 141 |
| Conread position: | 193-319 |
| Cow position: | chr17:9771147-9771272 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 205-312 |
| Cow position: | chr17:18339592-18339698 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 111-315 |
| Cow position: | chr18:8231364-8231158 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 70, 28 |
| Conread position: | 141-299 |
| Cow position: | chr18:20713826-20713979 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 112-315 |
| Cow position: | chr2:79819726-79819523 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 119-315 |
| Cow position: | chr2:52713837-52713634 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 188-315 |
| Cow position: | chr2:17394610-17394740 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 192-309 |
| Cow position: | chr2:81858038-81857918 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 112-276 |
| Cow position: | chr20:27289958-27290128 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 186-343 |
| Cow position: | chr21:34523553-34523706 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 14 |
| Conread position: | 105-321 |
| Cow position: | chr23:35200252-35200029 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 131-290 |
| Cow position: | chr23:8605469-8605307 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 110-320 |
| Cow position: | chr24:26052109-26052319 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 112-317 |
| Cow position: | chr24:26470949-26471159 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 112-320 |
| Cow position: | chr25:14588831-14589045 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 181-346 |
| Cow position: | chr26:13406447-13406607 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 122-306 |
| Cow position: | chr27:16804185-16803999 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 60, 129 |
| Conread position: | 182-352 |
| Cow position: | chr27:17157941-17158107 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 94-357 |
| Cow position: | chr28:17478865-17479119 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 143, 28 |
| Conread position: | 162-320 |
| Cow position: | chr28:14932219-14932375 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 15 |
| Conread position: | 186-346 |
| Cow position: | chr29:32272962-32273120 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 134 |
| Conread position: | 142-360 |
| Cow position: | chr3:14793507-14793287 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 179 |
| Conread position: | 148-320 |
| Cow position: | chr3:15794000-15794178 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 38, 134 |
| Conread position: | 186-351 |
| Cow position: | chr4:51028824-51028667 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 93-356 |
| Cow position: | chr5:20736616-20736356 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 112-320 |
| Cow position: | chr5:25211758-25211549 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 192-321 |
| Cow position: | chr5:22459799-22459930 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 107-315 |
| Cow position: | chr7:29719705-29719494 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 29 |
| Conread position: | 119-323 |
| Cow position: | chr7:35734804-35735008 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 119, 69 |
| Conread position: | 112-325 |
| Cow position: | chr8:11859491-11859708 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 29 |
| Conread position: | 126-320 |
| Cow position: | chr8:60670550-60670748 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 112-318 |
| Cow position: | chrX:11881785-11881989 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 199, 50 |
| Conread position: | 117-318 |
| Cow position: | chrX:8925170-8924966 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 139-361 |
| Cow position: | chrX:13421582-13421353 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 145-311 |
| Cow position: | chrX:2235405-2235573 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 77 |
| Conread position: | 185-315 |
| Cow position: | chrX:17203406-17203538 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |