Cow genome map
| Conread name: | Ss1.1-Pig2-112H14.5 |
| Conread position: | 182-420 |
| Cow position: | chr1:79931994-79932230 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 95, 47 |
| Conread position: | 196-412 |
| Cow position: | chr1:93693337-93693118 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 20, 34 |
| Conread position: | 1-136 |
| Cow position: | chr11:71873687-71873550 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 181-461 |
| Cow position: | chr11:75199238-75199524 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 95, 43 |
| Conread position: | 268-436 |
| Cow position: | chr11:31720495-31720327 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 265-408 |
| Cow position: | chr12:17905836-17905984 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 182-412 |
| Cow position: | chr15:51238564-51238796 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 70 |
| Conread position: | 187-389 |
| Cow position: | chr16:14610888-14611084 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 85, 31 |
| Conread position: | 261-408 |
| Cow position: | chr17:3966859-3967005 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 1-180 |
| Cow position: | chr19:2136771-2136590 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 151 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 181-367 |
| Cow position: | chr2:45115574-45115396 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 39 |
| Conread position: | 187-439 |
| Cow position: | chr2:80860804-80860542 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 47 |
| Conread position: | 188-461 |
| Cow position: | chr2:38813096-38812816 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 181-477 |
| Cow position: | chr24:39132326-39132621 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 114, 46 |
| Conread position: | 188-379 |
| Cow position: | chr24:16587500-16587306 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 189-447 |
| Cow position: | chr24:21114969-21115223 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 88, 37 |
| Conread position: | 198-475 |
| Cow position: | chr24:27680231-27679957 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 80, 39 |
| Conread position: | 181-370 |
| Cow position: | chr25:30074799-30074613 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 91, 39 |
| Conread position: | 188-494 |
| Cow position: | chr25:11415103-11415421 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 228-462 |
| Cow position: | chr27:16593062-16592834 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 181-438 |
| Cow position: | chr29:10623322-10623587 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 95, 44 |
| Conread position: | 181-443 |
| Cow position: | chr29:41326123-41325865 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 184, 48 |
| Conread position: | 1-151 |
| Cow position: | chr3:37056606-37056454 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 182-451 |
| Cow position: | chr3:13707225-13707500 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 113, 44 |
| Conread position: | 189-408 |
| Cow position: | chr3:81497663-81497445 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 181-421 |
| Cow position: | chr5:57988764-57988526 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 92, 39 |
| Conread position: | 181-445 |
| Cow position: | chr5:34462720-34462456 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 182-451 |
| Cow position: | chr5:27988706-27988438 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 37, 44 |
| Conread position: | 254-420 |
| Cow position: | chr6:4149591-4149758 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 180-460 |
| Cow position: | chr7:40895880-40896167 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 189-458 |
| Cow position: | chr7:30125900-30125624 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 227-456 |
| Cow position: | chr7:4818048-4818291 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 256-431 |
| Cow position: | chr8:33351045-33350868 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 162 |