Cow genome map
| Conread name: | Ss1.1-Pig2-11G21.5 |
| Conread position: | 159-336 |
| Cow position: | chr1:34745511-34745688 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 99 |
| Conread position: | 403-592 |
| Cow position: | chr1:91023421-91023239 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 407-568 |
| Cow position: | chr1:45315586-45315423 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 121 |
| Conread position: | 407-590 |
| Cow position: | chr1:99637204-99637019 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 400-566 |
| Cow position: | chr11:25783732-25783899 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 400-577 |
| Cow position: | chr11:18924765-18924942 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 126 |
| Conread position: | 403-586 |
| Cow position: | chr11:62620399-62620580 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 71 |
| Conread position: | 400-581 |
| Cow position: | chr12:22047920-22048102 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 407-590 |
| Cow position: | chr13:10924980-10925164 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 48 |
| Conread position: | 400-600 |
| Cow position: | chr14:10937678-10937480 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 126 |
| Conread position: | 400-572 |
| Cow position: | chr15:49483680-49483509 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 400-597 |
| Cow position: | chr15:15680789-15680983 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 406-586 |
| Cow position: | chr15:26896648-26896828 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 60, 122 |
| Conread position: | 403-584 |
| Cow position: | chr16:31149419-31149594 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 400-553 |
| Cow position: | chr17:39963955-39964106 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 70 |
| Conread position: | 400-575 |
| Cow position: | chr17:1081282-1081459 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 403-575 |
| Cow position: | chr17:7810674-7810499 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 128 |
| Conread position: | 407-602 |
| Cow position: | chr17:3387802-3387997 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 149, 118 |
| Conread position: | 403-596 |
| Cow position: | chr2:60091392-60091208 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 403-585 |
| Cow position: | chr20:2819626-2819811 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 403-585 |
| Cow position: | chr20:24491946-24491767 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 83, 35 |
| Conread position: | 407-585 |
| Cow position: | chr20:5365013-5365193 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 400-571 |
| Cow position: | chr21:10657002-10656830 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 60 |
| Conread position: | 403-571 |
| Cow position: | chr21:8506442-8506278 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 400-587 |
| Cow position: | chr23:15099890-15099704 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 53, 127 |
| Conread position: | 403-580 |
| Cow position: | chr23:23104445-23104269 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 155, 78 |
| Conread position: | 407-590 |
| Cow position: | chr23:307502-307687 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 382-589 |
| Cow position: | chr24:21656401-21656610 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 145 |
| Conread position: | 403-602 |
| Cow position: | chr25:24115278-24115078 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 63, 89 |
| Conread position: | 406-554 |
| Cow position: | chr25:26306163-26306017 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 34 |
| Conread position: | 403-569 |
| Cow position: | chr26:20291635-20291473 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 68, 99 |
| Conread position: | 401-590 |
| Cow position: | chr27:15350429-15350620 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 129, 62 |
| Conread position: | 403-574 |
| Cow position: | chr27:31183492-31183319 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 63, 125 |
| Conread position: | 403-589 |
| Cow position: | chr28:9705695-9705883 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 63, 174 |
| Conread position: | 400-588 |
| Cow position: | chr29:16735259-16735449 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 407-594 |
| Cow position: | chr29:19949349-19949531 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 90 |
| Conread position: | 407-590 |
| Cow position: | chr4:44773006-44772825 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 54 |
| Conread position: | 406-572 |
| Cow position: | chr5:65941181-65941017 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 400-594 |
| Cow position: | chr7:8888371-8888561 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 126 |
| Conread position: | 400-580 |
| Cow position: | chr8:38461653-38461477 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 403-590 |
| Cow position: | chr9:41728247-41728065 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 401-588 |
| Cow position: | chrX:4403382-4403570 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 68 |