Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig2-41E19.5
        

               Conread position:
               274-671
               

               Cow position:
               chr10:38538030-38537628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               299-701
               

               Cow position:
               chr10:10159188-10158796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               286
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               13, 58
               

               Conread position:
               313-783
               

               Cow position:
               chr10:51210463-51210913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               299
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               221, 18
               

               Conread position:
               314-613
               

               Cow position:
               chr10:13092798-13093092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 19
               

               Conread position:
               316-665
               

               Cow position:
               chr10:30684994-30684650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               316-674
               

               Cow position:
               chr10:8290497-8290850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-674
               

               Cow position:
               chr10:21487436-21487793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               316-681
               

               Cow position:
               chr10:57989473-57989109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               318-662
               

               Cow position:
               chr10:43263426-43263077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               59, 13
               

               Conread position:
               321-610
               

               Cow position:
               chr10:2314508-2314797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               332-680
               

               Cow position:
               chr10:280080-279727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               333-609
               

               Cow position:
               chr10:2282184-2281903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 190
               

               Conread position:
               339-662
               

               Cow position:
               chr10:22101774-22102098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               339-665
               

               Cow position:
               chr10:124927-125255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               339-669
               

               Cow position:
               chr10:11698778-11699114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               121, 143
               

               Conread position:
               382-610
               

               Cow position:
               chr10:17129777-17130003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 61
               

               Conread position:
               437-670
               

               Cow position:
               chr10:68486160-68486391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               25, 73
               

               Conread position:
               459-671
               

               Cow position:
               chr10:10708599-10708392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 85
               

               Conread position:
               299-627
               

               Cow position:
               chr11:83911516-83911189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               9, 140
               

               Conread position:
               299-665
               

               Cow position:
               chr11:71329723-71330093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               307-602
               

               Cow position:
               chr11:50360672-50360382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               62, 5
               

               Conread position:
               316-662
               

               Cow position:
               chr11:28054457-28054112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr11:11988266-11988612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr11:26124769-26124426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr11:41170534-41170195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               215, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr11:44157094-44156747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               144, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr11:44251951-44252300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               318-635
               

               Cow position:
               chr11:41084740-41084423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               318-650
               

               Cow position:
               chr11:1997374-1997051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               325-712
               

               Cow position:
               chr11:21012123-21011741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               138, 236
               

               Conread position:
               327-707
               

               Cow position:
               chr11:7291383-7291010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               243
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               172, 35
               

               Conread position:
               332-665
               

               Cow position:
               chr11:63655171-63654836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               127, 150
               

               Conread position:
               332-669
               

               Cow position:
               chr11:64081917-64081574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               333-662
               

               Cow position:
               chr11:23478481-23478816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               129, 305
               

               Conread position:
               333-719
               

               Cow position:
               chr11:9763569-9763201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               153, 43
               

               Conread position:
               339-665
               

               Cow position:
               chr11:12358244-12357916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               339-665
               

               Cow position:
               chr11:58134567-58134894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               339-668
               

               Cow position:
               chr11:29668436-29668105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               121, 212
               

               Conread position:
               344-662
               

               Cow position:
               chr11:53431884-53431561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 105
               

               Conread position:
               355-656
               

               Cow position:
               chr11:38557831-38557527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               109, 42
               

               Conread position:
               356-667
               

               Cow position:
               chr11:35387381-35387075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               372-672
               

               Cow position:
               chr11:69101105-69101405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               220
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               87, 147
               

               Conread position:
               401-667
               

               Cow position:
               chr11:36304974-36304702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 236
               

               Conread position:
               413-610
               

               Cow position:
               chr11:35505300-35505101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 141
               

               Conread position:
               259-725
               

               Cow position:
               chr12:21289360-21289837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               268-714
               

               Cow position:
               chr12:7864481-7864039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               304
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               35, 23
               

               Conread position:
               316-612
               

               Cow position:
               chr12:25263028-25262730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               144, 19
               

               Conread position:
               316-662
               

               Cow position:
               chr12:22205302-22204958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr12:6406205-6405855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               316-674
               

               Cow position:
               chr12:28765577-28765221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               144, 19
               

               Conread position:
               332-680
               

               Cow position:
               chr12:43030934-43030581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               333-652
               

               Cow position:
               chr12:1059298-1058977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               347-665
               

               Cow position:
               chr12:25100590-25100268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               6, 102
               

               Conread position:
               465-712
               

               Cow position:
               chr12:5369401-5369641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               69, 84
               

               Conread position:
               315-661
               

               Cow position:
               chr13:15520288-15519942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               316-665
               

               Cow position:
               chr13:15924159-15923811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               317-665
               

               Cow position:
               chr13:23003083-23002738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               318-671
               

               Cow position:
               chr13:10678990-10679337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               216, 13
               

               Conread position:
               332-665
               

               Cow position:
               chr13:32985114-32984782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               199, 126
               

               Conread position:
               332-669
               

               Cow position:
               chr13:58118676-58118333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               333-606
               

               Cow position:
               chr13:34020485-34020211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               123, 103
               

               Conread position:
               333-665
               

               Cow position:
               chr13:32545616-32545949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               336-614
               

               Cow position:
               chr13:5777725-5778004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               338-654
               

               Cow position:
               chr13:12734632-12734317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               119, 10
               

               Conread position:
               346-665
               

               Cow position:
               chr13:13900115-13900438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 39
               

               Conread position:
               354-755
               

               Cow position:
               chr13:38548201-38547808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               10, 48
               

               Conread position:
               401-610
               

               Cow position:
               chr13:43639043-43639248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 138
               

               Conread position:
               437-665
               

               Cow position:
               chr13:47841280-47841053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 64
               

               Conread position:
               482-670
               

               Cow position:
               chr13:37808695-37808510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 80
               

               Conread position:
               254-665
               

               Cow position:
               chr14:16273269-16272853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 44
               

               Conread position:
               316-540
               

               Cow position:
               chr14:44287150-44286925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 19
               

               Conread position:
               316-614
               

               Cow position:
               chr14:48254202-48253909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-662
               

               Cow position:
               chr14:12742971-12742627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr14:11154065-11153719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               316-665
               

               Cow position:
               chr14:17685497-17685842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               318-630
               

               Cow position:
               chr14:18882595-18882284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               14, 143
               

               Conread position:
               332-680
               

               Cow position:
               chr14:45671939-45671586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               333-712
               

               Cow position:
               chr14:17052247-17051863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               263
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               131, 61
               

               Conread position:
               339-665
               

               Cow position:
               chr14:15276113-15275785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               22, 8
               

               Conread position:
               344-665
               

               Cow position:
               chr14:13779076-13779399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 210
               

               Conread position:
               350-706
               

               Cow position:
               chr14:16883696-16883356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               353-665
               

               Cow position:
               chr14:5529197-5529511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 93
               

               Conread position:
               353-669
               

               Cow position:
               chr14:35917474-35917152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               106, 129
               

               Conread position:
               360-665
               

               Cow position:
               chr14:17000920-17000616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               91, 76
               

               Conread position:
               377-671
               

               Cow position:
               chr14:21127836-21128126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               83, 20
               

               Conread position:
               768-914
               

               Cow position:
               chr14:17051839-17051692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               299-603
               

               Cow position:
               chr15:47261537-47261837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               303-605
               

               Cow position:
               chr15:41322567-41322255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               309-665
               

               Cow position:
               chr15:24295190-24295543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               316-663
               

               Cow position:
               chr15:18576815-18577158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr15:6155847-6155498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr15:6553718-6553376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr15:19737951-19737604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr15:21665644-21665300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-669
               

               Cow position:
               chr15:44828896-44829254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               144, 19
               

               Conread position:
               316-671
               

               Cow position:
               chr15:53137124-53136769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               316-675
               

               Cow position:
               chr15:2076749-2077105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               317-661
               

               Cow position:
               chr15:3261231-3260877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               317-669
               

               Cow position:
               chr15:32494284-32493935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               134, 18
               

               Conread position:
               318-725
               

               Cow position:
               chr15:18258786-18258383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               136, 20
               

               Conread position:
               325-755
               

               Cow position:
               chr15:52716049-52716482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               20, 156
               

               Conread position:
               329-654
               

               Cow position:
               chr15:8057405-8057731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               131, 234
               

               Conread position:
               332-665
               

               Cow position:
               chr15:36971031-36971362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               95, 123
               

               Conread position:
               332-680
               

               Cow position:
               chr15:1772608-1772960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               333-565
               

               Cow position:
               chr15:13421270-13421038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               196, 218
               

               Conread position:
               333-577
               

               Cow position:
               chr15:33644687-33644447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               201, 122
               

               Conread position:
               333-705
               

               Cow position:
               chr15:42457510-42457154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               260
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               337-635
               

               Cow position:
               chr15:33316237-33315934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               123, 173
               

               Conread position:
               339-605
               

               Cow position:
               chr15:18069376-18069122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               339-680
               

               Cow position:
               chr15:4142701-4142355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 143
               

               Conread position:
               351-666
               

               Cow position:
               chr15:30733095-30732783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               10, 145
               

               Conread position:
               358-730
               

               Cow position:
               chr15:22241122-22240759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               40, 160
               

               Conread position:
               372-648
               

               Cow position:
               chr15:35719283-35719007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               162, 74
               

               Conread position:
               459-635
               

               Cow position:
               chr15:5207133-5207312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               78, 101
               

               Conread position:
               262-671
               

               Cow position:
               chr16:44867797-44867388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               53, 21
               

               Conread position:
               267-665
               

               Cow position:
               chr16:29046724-29047125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               276-665
               

               Cow position:
               chr16:40296470-40296074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               36, 174
               

               Conread position:
               316-665
               

               Cow position:
               chr16:2483386-2483037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr16:2727533-2727185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr16:25441381-25441729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr16:25457710-25457361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr16:31592159-31591817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 16
               

               Conread position:
               318-725
               

               Cow position:
               chr16:9444018-9443621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 52
               

               Conread position:
               321-597
               

               Cow position:
               chr16:47571393-47571122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               139, 10
               

               Conread position:
               324-625
               

               Cow position:
               chr16:33012468-33012761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               105, 24
               

               Conread position:
               332-680
               

               Cow position:
               chr16:28197911-28197557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 152
               

               Conread position:
               333-623
               

               Cow position:
               chr16:28867382-28867093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               126, 55
               

               Conread position:
               333-671
               

               Cow position:
               chr16:21809547-21809883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               128, 17
               

               Conread position:
               333-671
               

               Cow position:
               chr16:30070368-30070704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               65, 117
               

               Conread position:
               336-671
               

               Cow position:
               chr16:19235713-19235387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               39, 12
               

               Conread position:
               339-665
               

               Cow position:
               chr16:5661618-5661946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 210
               

               Conread position:
               339-707
               

               Cow position:
               chr16:23721854-23721494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               26, 84
               

               Conread position:
               348-604
               

               Cow position:
               chr16:13873681-13873940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 132
               

               Conread position:
               360-665
               

               Cow position:
               chr16:1567657-1567350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               89, 191
               

               Conread position:
               360-665
               

               Cow position:
               chr16:28377013-28377320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 76
               

               Conread position:
               365-665
               

               Cow position:
               chr16:18757575-18757273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               171, 187
               

               Conread position:
               366-671
               

               Cow position:
               chr16:13409712-13410015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               91, 168
               

               Conread position:
               375-650
               

               Cow position:
               chr16:14466018-14466294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               84, 182
               

               Conread position:
               395-635
               

               Cow position:
               chr16:216958-216717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               136, 76
               

               Conread position:
               395-712
               

               Cow position:
               chr16:20134255-20133950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               59, 121
               

               Conread position:
               299-636
               

               Cow position:
               chr17:40850159-40850496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               316-606
               

               Cow position:
               chr17:6260175-6260466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               316-665
               

               Cow position:
               chr17:14894486-14894835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               45, 16
               

               Conread position:
               319-651
               

               Cow position:
               chr17:18589401-18589739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               131, 153
               

               Conread position:
               333-725
               

               Cow position:
               chr17:14911119-14910738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               128, 16
               

               Conread position:
               335-606
               

               Cow position:
               chr17:14206049-14205777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               124, 23
               

               Conread position:
               337-665
               

               Cow position:
               chr17:16857174-16856844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               339-665
               

               Cow position:
               chr17:15324175-15324503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               339-665
               

               Cow position:
               chr17:24029656-24029330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               360-665
               

               Cow position:
               chr17:11087352-11087048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               91, 86
               

               Conread position:
               382-606
               

               Cow position:
               chr17:32297732-32297511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               401-707
               

               Cow position:
               chr17:24573066-24573367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               135, 35
               

               Conread position:
               272-705
               

               Cow position:
               chr18:8643484-8643901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 19
               

               Conread position:
               273-705
               

               Cow position:
               chr18:25961924-25961504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               91, 18
               

               Conread position:
               310-665
               

               Cow position:
               chr18:28973357-28973001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               316-665
               

               Cow position:
               chr18:14130931-14131276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr18:16176076-16175731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr18:27837776-27837427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-671
               

               Cow position:
               chr18:40478923-40479279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               318-582
               

               Cow position:
               chr18:10036305-10036041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               141, 14
               

               Conread position:
               318-665
               

               Cow position:
               chr18:14420701-14421039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               143, 13
               

               Conread position:
               319-617
               

               Cow position:
               chr18:29746566-29746271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               170, 12
               

               Conread position:
               323-671
               

               Cow position:
               chr18:20693610-20693270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               7, 26
               

               Conread position:
               325-654
               

               Cow position:
               chr18:5655903-5656209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               332-665
               

               Cow position:
               chr18:11274558-11274223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               332-665
               

               Cow position:
               chr18:24040177-24039842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 217
               

               Conread position:
               332-680
               

               Cow position:
               chr18:33953029-33952679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               336-665
               

               Cow position:
               chr18:21148936-21148610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               336-678
               

               Cow position:
               chr18:23824753-23825092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               195, 12
               

               Conread position:
               339-606
               

               Cow position:
               chr18:37527182-37527443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               339-680
               

               Cow position:
               chr18:19352926-19353272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 143
               

               Conread position:
               344-665
               

               Cow position:
               chr18:14416541-14416868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 106
               

               Conread position:
               372-725
               

               Cow position:
               chr18:17197817-17197474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               87, 20
               

               Conread position:
               380-706
               

               Cow position:
               chr18:39077950-39078270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               74, 98
               

               Conread position:
               299-658
               

               Cow position:
               chr19:2273865-2273501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               316-612
               

               Cow position:
               chr19:341764-342055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               316-665
               

               Cow position:
               chr19:438897-438549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-878
               

               Cow position:
               chr19:5729374-5729934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               353
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               327-880
               

               Cow position:
               chr19:168053-167506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               563
               

               Alignm identity:
               344
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               133, 155
               

               Conread position:
               329-585
               

               Cow position:
               chr19:35980695-35980950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               142, 24
               

               Conread position:
               331-550
               

               Cow position:
               chr19:29391859-29391640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 130
               

               Conread position:
               336-617
               

               Cow position:
               chr19:3082721-3082999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               336-670
               

               Cow position:
               chr19:25173930-25173601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               116, 29
               

               Conread position:
               347-668
               

               Cow position:
               chr19:39391075-39391403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               6, 102
               

               Conread position:
               401-646
               

               Cow position:
               chr19:5725614-5725864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               14, 46
               

               Conread position:
               247-658
               

               Cow position:
               chr20:8992792-8992376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               64, 11
               

               Conread position:
               271-593
               

               Cow position:
               chr20:17704414-17704089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               303-701
               

               Cow position:
               chr20:19403652-19404040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               316-653
               

               Cow position:
               chr20:12569020-12569357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               316-662
               

               Cow position:
               chr20:29949001-29949347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               316-665
               

               Cow position:
               chr20:15097375-15097029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr20:23799386-23799730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr20:27869702-27870050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               316-674
               

               Cow position:
               chr20:5535437-5535790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               318-725
               

               Cow position:
               chr20:16429571-16429173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               150, 14
               

               Conread position:
               329-680
               

               Cow position:
               chr20:38351182-38351538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               131, 153
               

               Conread position:
               334-665
               

               Cow position:
               chr20:17661562-17661229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               336-672
               

               Cow position:
               chr20:12308830-12308501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               105, 31
               

               Conread position:
               336-728
               

               Cow position:
               chr20:40356767-40357146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               117, 13
               

               Conread position:
               339-658
               

               Cow position:
               chr20:28565071-28564750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               339-674
               

               Cow position:
               chr20:15292527-15292858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               347-665
               

               Cow position:
               chr20:23469138-23468816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               6, 102
               

               Conread position:
               360-667
               

               Cow position:
               chr20:39243089-39243403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               40, 161
               

               Conread position:
               374-592
               

               Cow position:
               chr20:20144357-20144140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               158, 70
               

               Conread position:
               274-665
               

               Cow position:
               chr21:3779342-3779729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               297-702
               

               Cow position:
               chr21:27595398-27595798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               316-612
               

               Cow position:
               chr21:1192372-1192670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr21:30599307-30598960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr21:35144377-35144723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               316-665
               

               Cow position:
               chr21:40271060-40270711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               318-673
               

               Cow position:
               chr21:3143228-3142879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               333-614
               

               Cow position:
               chr21:750090-749812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               128, 44
               

               Conread position:
               333-665
               

               Cow position:
               chr21:2883111-2882777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               28, 14
               

               Conread position:
               333-666
               

               Cow position:
               chr21:20175051-20175387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               124, 205
               

               Conread position:
               333-753
               

               Cow position:
               chr21:963058-963476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               279
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               336-635
               

               Cow position:
               chr21:32439769-32440063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               123, 12
               

               Conread position:
               336-755
               

               Cow position:
               chr21:4275537-4275127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               338-548
               

               Cow position:
               chr21:39592069-39592278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               53, 64
               

               Conread position:
               338-670
               

               Cow position:
               chr21:45301837-45301511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               60, 54
               

               Conread position:
               339-661
               

               Cow position:
               chr21:146564-146886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               365-665
               

               Cow position:
               chr21:5840605-5840303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               86, 80
               

               Conread position:
               374-614
               

               Cow position:
               chr21:2900419-2900662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               86, 180
               

               Conread position:
               448-662
               

               Cow position:
               chr21:406586-406376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               453-671
               

               Cow position:
               chr21:37160361-37160574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               71, 107
               

               Conread position:
               509-753
               

               Cow position:
               chr21:45114907-45115142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               210, 48
               

               Conread position:
               272-665
               

               Cow position:
               chr22:44934375-44934773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               299-502
               

               Cow position:
               chr22:39471887-39471682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 179
               

               Conread position:
               309-665
               

               Cow position:
               chr22:560263-559913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               151, 9
               

               Conread position:
               313-670
               

               Cow position:
               chr22:16437942-16438292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 206
               

               Conread position:
               316-665
               

               Cow position:
               chr22:34168778-34169127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr22:39469075-39468732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               325-622
               

               Cow position:
               chr22:26835537-26835245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               134, 23
               

               Conread position:
               325-657
               

               Cow position:
               chr22:21589784-21590118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               41, 22
               

               Conread position:
               332-680
               

               Cow position:
               chr22:14629872-14630225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               336-623
               

               Cow position:
               chr22:22171198-22171485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 12
               

               Conread position:
               339-583
               

               Cow position:
               chr22:24945735-24945977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               89, 103
               

               Conread position:
               339-662
               

               Cow position:
               chr22:42991640-42991965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               346-665
               

               Cow position:
               chr22:15313483-15313163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 101
               

               Conread position:
               316-665
               

               Cow position:
               chr23:2716836-2717182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               144, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr23:4640182-4639833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               318-597
               

               Cow position:
               chr23:19797585-19797859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               318-606
               

               Cow position:
               chr23:38939583-38939864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               203, 13
               

               Conread position:
               318-665
               

               Cow position:
               chr23:15177520-15177862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               133, 13
               

               Conread position:
               318-702
               

               Cow position:
               chr23:29831392-29831032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               263
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               332-665
               

               Cow position:
               chr23:36030916-36030584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               332-680
               

               Cow position:
               chr23:23830415-23830768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               127, 150
               

               Conread position:
               332-702
               

               Cow position:
               chr23:31447270-31447648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               347-665
               

               Cow position:
               chr23:28913862-28914184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               6, 102
               

               Conread position:
               360-680
               

               Cow position:
               chr23:19490031-19490345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 74
               

               Conread position:
               299-665
               

               Cow position:
               chr24:9188228-9187859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 251
               

               Conread position:
               309-665
               

               Cow position:
               chr24:29187811-29188165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               316-612
               

               Cow position:
               chr24:17696444-17696148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               45, 16
               

               Conread position:
               316-675
               

               Cow position:
               chr24:19833919-19834276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               320-614
               

               Cow position:
               chr24:17732739-17733034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               124, 59
               

               Conread position:
               321-614
               

               Cow position:
               chr24:14754470-14754173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               332-667
               

               Cow position:
               chr24:13188714-13189048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               199, 126
               

               Conread position:
               336-613
               

               Cow position:
               chr24:17404396-17404663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               127, 26
               

               Conread position:
               339-612
               

               Cow position:
               chr24:9544611-9544888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               360-665
               

               Cow position:
               chr24:12335191-12334884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 86
               

               Conread position:
               362-680
               

               Cow position:
               chr24:8030860-8031183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               98, 120
               

               Conread position:
               407-605
               

               Cow position:
               chr24:11939301-11939103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 131
               

               Conread position:
               465-662
               

               Cow position:
               chr24:5888549-5888354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               143, 97
               

               Conread position:
               465-664
               

               Cow position:
               chr24:7070381-7070573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 87
               

               Conread position:
               258-674
               

               Cow position:
               chr25:34346591-34346174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               80, 40
               

               Conread position:
               299-613
               

               Cow position:
               chr25:29228636-29228323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               317-665
               

               Cow position:
               chr25:25507191-25507539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               318-587
               

               Cow position:
               chr25:25836909-25836641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 49
               

               Conread position:
               333-648
               

               Cow position:
               chr25:32153762-32154079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               110, 220
               

               Conread position:
               357-665
               

               Cow position:
               chr25:33050471-33050172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               104, 30
               

               Conread position:
               382-635
               

               Cow position:
               chr25:3972675-3972932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               14, 97
               

               Conread position:
               397-716
               

               Cow position:
               chr25:16432809-16432498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               64, 95
               

               Conread position:
               288-594
               

               Cow position:
               chr26:20484555-20484853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               316-665
               

               Cow position:
               chr26:9562848-9562500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               332-665
               

               Cow position:
               chr26:3030310-3029975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               97, 115
               

               Conread position:
               333-671
               

               Cow position:
               chr26:21710452-21710111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               129, 88
               

               Conread position:
               336-670
               

               Cow position:
               chr26:16857579-16857246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               124, 77
               

               Conread position:
               340-671
               

               Cow position:
               chr26:32927095-32926771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               111, 118
               

               Conread position:
               365-769
               

               Cow position:
               chr26:32685225-32684849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               171, 55
               

               Conread position:
               402-717
               

               Cow position:
               chr26:16885533-16885845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               52, 93
               

               Conread position:
               247-614
               

               Cow position:
               chr27:10351573-10351204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               102, 8
               

               Conread position:
               274-665
               

               Cow position:
               chr27:1209752-1210146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               275-665
               

               Cow position:
               chr27:9330122-9330518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 8
               

               Conread position:
               299-590
               

               Cow position:
               chr27:25433965-25434260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               160, 256
               

               Conread position:
               316-665
               

               Cow position:
               chr27:9992755-9992407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr27:26325514-26325863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               318-712
               

               Cow position:
               chr27:16612471-16612089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               142, 56
               

               Conread position:
               332-665
               

               Cow position:
               chr27:16033939-16033602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               332-680
               

               Cow position:
               chr27:15541784-15542136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               339-665
               

               Cow position:
               chr27:893676-894004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 8
               

               Conread position:
               339-665
               

               Cow position:
               chr27:15037123-15036797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               339-665
               

               Cow position:
               chr27:26555198-26554871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               350-529
               

               Cow position:
               chr27:28011590-28011769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 70
               

               Conread position:
               262-725
               

               Cow position:
               chr28:12180633-12180181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               308
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               316-664
               

               Cow position:
               chr28:1167390-1167042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr28:1505357-1505705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr28:5566641-5566990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr28:33252797-33253139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               318-755
               

               Cow position:
               chr28:20636592-20636168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               289
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               332-665
               

               Cow position:
               chr28:3191750-3191420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               333-665
               

               Cow position:
               chr28:12150810-12151141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 103
               

               Conread position:
               333-725
               

               Cow position:
               chr28:1585726-1586104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               258
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               141, 68
               

               Conread position:
               339-663
               

               Cow position:
               chr28:18519937-18519612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               339-665
               

               Cow position:
               chr28:13460482-13460809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               121, 9
               

               Conread position:
               343-597
               

               Cow position:
               chr28:15738948-15738696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 56
               

               Conread position:
               423-725
               

               Cow position:
               chr28:25714160-25713859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               41, 144
               

               Conread position:
               316-665
               

               Cow position:
               chr29:2100303-2100649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr29:2840919-2840577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               156, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr29:10647793-10647450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               110, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr29:25932085-25931740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr29:40502526-40502177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               316-673
               

               Cow position:
               chr29:2690358-2690715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               135, 16
               

               Conread position:
               318-671
               

               Cow position:
               chr29:20624194-20624536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               216, 30
               

               Conread position:
               329-665
               

               Cow position:
               chr29:9619885-9620223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               131, 220
               

               Conread position:
               332-680
               

               Cow position:
               chr29:27249878-27249525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               333-674
               

               Cow position:
               chr29:15894384-15894041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               127, 149
               

               Conread position:
               338-666
               

               Cow position:
               chr29:21520013-21519682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               24, 99
               

               Conread position:
               339-680
               

               Cow position:
               chr29:34925950-34926296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               121, 143
               

               Conread position:
               360-665
               

               Cow position:
               chr29:16023032-16023339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               91, 86
               

               Conread position:
               2-205
               

               Cow position:
               chr8:45176885-45177094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 87
               

               Conread position:
               274-665
               

               Cow position:
               chr8:46050829-46051224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               38, 22
               

               Conread position:
               276-665
               

               Cow position:
               chr8:8401469-8401078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 36
               

               Conread position:
               290-592
               

               Cow position:
               chr8:49932263-49932570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               299-680
               

               Cow position:
               chr8:1319707-1320097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               306-662
               

               Cow position:
               chr8:60061061-60061417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 12
               

               Conread position:
               310-606
               

               Cow position:
               chr8:25775982-25775688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               316-664
               

               Cow position:
               chr8:30487692-30487346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               135, 16
               

               Conread position:
               316-665
               

               Cow position:
               chr8:4687089-4687439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               36, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr8:7161585-7161934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr8:17311713-17312060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr8:42484606-42484953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               316-665
               

               Cow position:
               chr8:50288234-50287887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               316-681
               

               Cow position:
               chr8:8911199-8911563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               237
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               318-606
               

               Cow position:
               chr8:4534596-4534322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               214, 13
               

               Conread position:
               318-616
               

               Cow position:
               chr8:14065396-14065096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               318-623
               

               Cow position:
               chr8:61805908-61806217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               327-595
               

               Cow position:
               chr8:46203986-46204242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               329-579
               

               Cow position:
               chr8:19573875-19574122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               123, 19
               

               Conread position:
               331-814
               

               Cow position:
               chr8:45177234-45177736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 23
               

               Conread position:
               332-600
               

               Cow position:
               chr8:13502832-13503105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               122, 153
               

               Conread position:
               332-665
               

               Cow position:
               chr8:32631326-32630991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               332-665
               

               Cow position:
               chr8:34348379-34348710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               137, 104
               

               Conread position:
               332-669
               

               Cow position:
               chr8:6684148-6684491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               332-680
               

               Cow position:
               chr8:37931792-37932145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               127, 150
               

               Conread position:
               333-667
               

               Cow position:
               chr8:57019693-57020021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               126, 25
               

               Conread position:
               333-670
               

               Cow position:
               chr8:34268873-34269205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               128, 59
               

               Conread position:
               336-577
               

               Cow position:
               chr8:56380659-56380891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               198, 88
               

               Conread position:
               337-723
               

               Cow position:
               chr8:47429011-47428637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 201
               

               Conread position:
               339-665
               

               Cow position:
               chr8:14591190-14590865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 8
               

               Conread position:
               339-665
               

               Cow position:
               chr8:24915627-24915299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               343-629
               

               Cow position:
               chr8:10076796-10077080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               137, 115
               

               Conread position:
               346-665
               

               Cow position:
               chr8:11832424-11832746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               20, 5
               

               Conread position:
               347-673
               

               Cow position:
               chr8:23771354-23771680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               6, 92
               

               Conread position:
               347-674
               

               Cow position:
               chr8:39195495-39195164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               5, 208
               

               Conread position:
               395-706
               

               Cow position:
               chr8:39809726-39809416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               814-936
               

               Cow position:
               chr8:45177998-45178129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               266-725
               

               Cow position:
               chr9:20026398-20026855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               42, 293
               

               Conread position:
               306-753
               

               Cow position:
               chr9:23816329-23816761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               297
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               154, 5
               

               Conread position:
               316-662
               

               Cow position:
               chr9:51181845-51181500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr9:6249639-6249988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr9:10322145-10322492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr9:22653912-22654261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               316-665
               

               Cow position:
               chr9:60277677-60277327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               316-680
               

               Cow position:
               chr9:42310027-42310389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               318-504
               

               Cow position:
               chr9:5865260-5865074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               136, 13
               

               Conread position:
               318-706
               

               Cow position:
               chr9:28695804-28696185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               257
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               43, 13
               

               Conread position:
               332-669
               

               Cow position:
               chr9:28440162-28440504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               128, 16
               

               Conread position:
               336-612
               

               Cow position:
               chr9:4978257-4978525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               336-635
               

               Cow position:
               chr9:26683897-26684200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               118, 142
               

               Conread position:
               336-638
               

               Cow position:
               chr9:25582816-25582512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               337-658
               

               Cow position:
               chr9:30672729-30673047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               339-654
               

               Cow position:
               chr9:5004345-5004652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               112, 97
               

               Conread position:
               339-665
               

               Cow position:
               chr9:16176132-16176460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               347-665
               

               Cow position:
               chr9:32969316-32969639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               5, 102
               

               Conread position:
               358-670
               

               Cow position:
               chr9:3045764-3046071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               129, 96
               

               Conread position:
               360-665
               

               Cow position:
               chr9:59536478-59536785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               91, 86
               

               Conread position:
               375-716
               

               Cow position:
               chr9:28312001-28311672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               478-725
               

               Cow position:
               chr9:25375218-25374982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               134, 80
               

               Conread position:
               268-659
               

               Cow position:
               chrX:27622003-27621607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 93
               

               Conread position:
               269-665
               

               Cow position:
               chrX:15179234-15178831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 55
               

               Conread position:
               269-669
               

               Cow position:
               chrX:982855-983264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               274-680
               

               Cow position:
               chrX:17478224-17477813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               186, 208
               

               Conread position:
               299-663
               

               Cow position:
               chrX:15119540-15119178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 24
               

               Conread position:
               299-672
               

               Cow position:
               chrX:37332430-37332801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               11, 264
               

               Conread position:
               312-592
               

               Cow position:
               chrX:19726995-19726713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               316-662
               

               Cow position:
               chrX:2482384-2482039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chrX:320715-321062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               47, 15
               

               Conread position:
               316-665
               

               Cow position:
               chrX:971020-971369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               50, 15
               

               Conread position:
               316-665
               

               Cow position:
               chrX:13412887-13412538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               316-665
               

               Cow position:
               chrX:16699552-16699899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               316-665
               

               Cow position:
               chrX:29096453-29096799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               316-665
               

               Cow position:
               chrX:30711835-30712184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               316-665
               

               Cow position:
               chrX:31198692-31199044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               316-674
               

               Cow position:
               chrX:20720235-20720594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               316-680
               

               Cow position:
               chrX:1547226-1547588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               144, 15
               

               Conread position:
               317-665
               

               Cow position:
               chrX:15599217-15599559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               134, 14
               

               Conread position:
               318-672
               

               Cow position:
               chrX:2765594-2765949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               45, 13
               

               Conread position:
               322-671
               

               Cow position:
               chrX:17491711-17491363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               325-575
               

               Cow position:
               chrX:7550265-7550023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               325-733
               

               Cow position:
               chrX:13001783-13001372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               326-597
               

               Cow position:
               chrX:4416922-4417195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               14, 24
               

               Conread position:
               331-753
               

               Cow position:
               chrX:8940495-8940089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 5
               

               Conread position:
               332-665
               

               Cow position:
               chrX:13076438-13076104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               332-665
               

               Cow position:
               chrX:13097012-13096678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               332-665
               

               Cow position:
               chrX:31493679-31494012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 142
               

               Conread position:
               332-680
               

               Cow position:
               chrX:12353499-12353852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               333-521
               

               Cow position:
               chrX:7407222-7407032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               121, 150
               

               Conread position:
               333-567
               

               Cow position:
               chrX:1068296-1068535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 163
               

               Conread position:
               333-730
               

               Cow position:
               chrX:34246519-34246131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               336-530
               

               Cow position:
               chrX:36268325-36268512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               336-636
               

               Cow position:
               chrX:33801260-33801565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               69, 46
               

               Conread position:
               336-659
               

               Cow position:
               chrX:29119706-29120030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               336-667
               

               Cow position:
               chrX:7305959-7306287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               178, 13
               

               Conread position:
               336-671
               

               Cow position:
               chrX:25612030-25612365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               124, 158
               

               Conread position:
               337-665
               

               Cow position:
               chrX:12062774-12063108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               90, 46
               

               Conread position:
               338-601
               

               Cow position:
               chrX:27602625-27602882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               338-658
               

               Cow position:
               chrX:1555922-1555598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               338-671
               

               Cow position:
               chrX:20794616-20794282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               339-616
               

               Cow position:
               chrX:24523041-24523320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               115, 48
               

               Conread position:
               339-665
               

               Cow position:
               chrX:7752165-7752500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               121, 210
               

               Conread position:
               339-665
               

               Cow position:
               chrX:21829797-21830125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               343-672
               

               Cow position:
               chrX:3014697-3015016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               347-711
               

               Cow position:
               chrX:27495195-27495560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               6, 101
               

               Conread position:
               358-680
               

               Cow position:
               chrX:5863682-5864006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               124, 100
               

               Conread position:
               367-717
               

               Cow position:
               chrX:6198811-6198470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               92, 138
               

               Conread position:
               401-672
               

               Cow position:
               chrX:24616104-24615838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               48, 77
               

               Conread position:
               753-902
               

               Cow position:
               chrX:8940126-8939973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 0
Conread position:	274-671
Cow position:	chr10:38538030-38537628 (view UCSC Genome Browser custom track)
Alignm length:	408
Alignm identity:	254
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	38, 24
Conread position:	299-701
Cow position:	chr10:10159188-10158796 (view UCSC Genome Browser custom track)
Alignm length:	412
Alignm identity:	286
Alignm E-value:	2.8026e-45
Alignm gaps (pig, cow):	13, 58
Conread position:	313-783
Cow position:	chr10:51210463-51210913 (view UCSC Genome Browser custom track)
Alignm length:	474
Alignm identity:	299
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	221, 18
Conread position:	314-613
Cow position:	chr10:13092798-13093092 (view UCSC Genome Browser custom track)
Alignm length:	306
Alignm identity:	208
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	44, 19
Conread position:	316-665
Cow position:	chr10:30684994-30684650 (view UCSC Genome Browser custom track)
Alignm length:	355
Alignm identity:	230
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	45, 15
Conread position:	316-674
Cow position:	chr10:8290497-8290850 (view UCSC Genome Browser custom track)
Alignm length:	366
Alignm identity:	235
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	50, 15
Conread position:	316-681
Cow position:	chr10:57989473-57989109 (view UCSC Genome Browser custom track)
Alignm length:	377
Alignm identity:	245
Alignm E-value:	9e-25
Alignm gaps (pig, cow):	50, 16
Conread position:	318-662
Cow position:	chr10:43263426-43263077 (view UCSC Genome Browser custom track)
Alignm length:	354
Alignm identity:	244
Alignm E-value:	2.00386e-43
Alignm gaps (pig, cow):	59, 13
Conread position:	321-610
Cow position:	chr10:2314508-2314797 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	197
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	68, 22
Conread position:	332-680
Cow position:	chr10:280080-279727 (view UCSC Genome Browser custom track)
Alignm length:	358
Alignm identity:	226
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	63, 56
Conread position:	333-609
Cow position:	chr10:2282184-2281903 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	192
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	127, 190
Conread position:	339-662
Cow position:	chr10:22101774-22102098 (view UCSC Genome Browser custom track)
Alignm length:	330
Alignm identity:	214
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	28, 8
Conread position:	339-665
Cow position:	chr10:124927-125255 (view UCSC Genome Browser custom track)
Alignm length:	336
Alignm identity:	221
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	27, 8
Conread position:	339-669
Cow position:	chr10:11698778-11699114 (view UCSC Genome Browser custom track)
Alignm length:	339
Alignm identity:	214
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	121, 143
Conread position:	382-610
Cow position:	chr10:17129777-17130003 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	170
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	54, 61
Conread position:	437-670
Cow position:	chr10:68486160-68486391 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	156
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	25, 73
Conread position:	459-671
Cow position:	chr10:10708599-10708392 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	145
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	75, 85
Conread position:	299-627
Cow position:	chr11:83911516-83911189 (view UCSC Genome Browser custom track)
Alignm length:	337
Alignm identity:	216
Alignm E-value:	8e-22
Alignm gaps (pig, cow):	9, 140
Conread position:	299-665
Cow position:	chr11:71329723-71330093 (view UCSC Genome Browser custom track)
Alignm length:	377
Alignm identity:	239
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	13, 142
Conread position:	307-602
Cow position:	chr11:50360672-50360382 (view UCSC Genome Browser custom track)
Alignm length:	298
Alignm identity:	200
Alignm E-value:	7e-31
Alignm gaps (pig, cow):	62, 5