Cow genome map

Conread name: Ss1.1-Pig2-5O09.5

Conread position: 354-594
Cow position: chr1:98413027-98412792 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 357-579
Cow position: chr1:638197-638422 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 177
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 87, 162

Conread position: 357-589
Cow position: chr1:98880005-98879773 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 57, 76

Conread position: 357-594
Cow position: chr1:75184940-75185173 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 357-595
Cow position: chr1:5655430-5655197 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 358-486
Cow position: chr1:84245729-84245599 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 358-489
Cow position: chr1:77949197-77949328 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 358-493
Cow position: chr1:47365262-47365397 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 358-510
Cow position: chr1:30086399-30086250 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 107, 0

Conread position: 358-512
Cow position: chr1:81642196-81642043 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 92

Conread position: 358-519
Cow position: chr1:17635018-17634855 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 358-566
Cow position: chr1:83120655-83120859 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 97, 90

Conread position: 358-594
Cow position: chr1:32496217-32496440 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 56, 0

Conread position: 358-594
Cow position: chr1:78027847-78027613 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 134

Conread position: 359-507
Cow position: chr1:77942862-77942715 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 359-614
Cow position: chr1:32501154-32501407 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 52, 88

Conread position: 360-503
Cow position: chr1:31978421-31978551 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 360-526
Cow position: chr1:100140333-100140501 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 360-588
Cow position: chr1:79839699-79839483 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 175, 16

Conread position: 360-592
Cow position: chr1:57267133-57266908 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 175, 16

Conread position: 360-593
Cow position: chr1:91026055-91026276 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 187
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 205, 36

Conread position: 360-594
Cow position: chr1:39297485-39297712 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 214, 36

Conread position: 361-589
Cow position: chr1:87757559-87757341 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 115, 43

Conread position: 361-589
Cow position: chr1:88767875-88768092 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 115, 43

Conread position: 362-489
Cow position: chr1:29107492-29107365 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 110
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 362-582
Cow position: chr1:32964877-32965097 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 209, 196

Conread position: 362-587
Cow position: chr1:32284692-32284906 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 20

Conread position: 364-572
Cow position: chr1:55117761-55117968 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 364-594
Cow position: chr1:29099871-29099641 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 198, 209

Conread position: 365-594
Cow position: chr1:89776832-89776607 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 366-589
Cow position: chr1:93431149-93431352 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 103, 0

Conread position: 366-593
Cow position: chr1:35434745-35434963 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 58, 42

Conread position: 366-594
Cow position: chr1:48321584-48321366 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 99, 105

Conread position: 369-473
Cow position: chr1:16523567-16523671 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 369-594
Cow position: chr1:80315093-80315314 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 143, 0

Conread position: 383-555
Cow position: chr1:64752818-64752987 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 383-594
Cow position: chr1:101441119-101440914 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 127, 0

Conread position: 388-544
Cow position: chr1:95063613-95063766 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 403-655
Cow position: chr1:13246416-13246664 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 170, 111

Conread position: 403-708
Cow position: chr1:33647340-33647023 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 61, 147

Conread position: 406-589
Cow position: chr1:33881039-33881222 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 406-589
Cow position: chr1:76596141-76596323 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 149
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 407-556
Cow position: chr1:74766459-74766607 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 415-594
Cow position: chr1:23297669-23297845 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 166, 85

Conread position: 420-593
Cow position: chr1:11336013-11335840 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 115, 19

Conread position: 425-616
Cow position: chr1:22590081-22590272 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 118, 97

Conread position: 429-589
Cow position: chr1:55120381-55120229 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 434-594
Cow position: chr1:15983067-15982912 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 482-599
Cow position: chr1:47365616-47365731 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 352-513
Cow position: chr10:27305999-27306160 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 356-593
Cow position: chr10:66000649-66000424 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 48

Conread position: 357-588
Cow position: chr10:16732718-16732495 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 178, 47

Conread position: 357-594
Cow position: chr10:1036596-1036365 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 31

Conread position: 358-485
Cow position: chr10:51686621-51686755 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 358-570
Cow position: chr10:42349305-42349097 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 202, 85

Conread position: 358-582
Cow position: chr10:62892459-62892245 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 66, 0

Conread position: 358-585
Cow position: chr10:65366963-65366742 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 156, 0

Conread position: 358-589
Cow position: chr10:68375460-68375243 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 358-591
Cow position: chr10:12404856-12405087 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 177, 61

Conread position: 358-593
Cow position: chr10:27686666-27686896 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 177, 50

Conread position: 358-594
Cow position: chr10:27687499-27687733 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 157

Conread position: 358-594
Cow position: chr10:63684850-63685088 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 163

Conread position: 358-608
Cow position: chr10:32912633-32912882 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 196

Conread position: 360-583
Cow position: chr10:349867-349650 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 175, 44

Conread position: 360-584
Cow position: chr10:32983423-32983194 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 83

Conread position: 360-587
Cow position: chr10:69628443-69628219 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 175, 43

Conread position: 360-588
Cow position: chr10:33720655-33720889 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 85

Conread position: 360-589
Cow position: chr10:21388203-21387966 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 54, 130

Conread position: 360-589
Cow position: chr10:32421182-32420951 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 80

Conread position: 360-593
Cow position: chr10:40717991-40717764 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 56, 14

Conread position: 360-594
Cow position: chr10:838196-838425 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 362-593
Cow position: chr10:36211345-36211110 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 8

Conread position: 363-594
Cow position: chr10:23859911-23860147 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 364-594
Cow position: chr10:932208-931979 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 210, 70

Conread position: 365-480
Cow position: chr10:30048111-30048227 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 365-589
Cow position: chr10:67560954-67561193 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 190
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 10

Conread position: 368-636
Cow position: chr10:52419962-52420217 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 0

Conread position: 371-594
Cow position: chr10:52449997-52450225 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 139, 27

Conread position: 388-512
Cow position: chr10:17315829-17315949 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 16

Conread position: 394-580
Cow position: chr10:7730533-7730350 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 57, 38

Conread position: 405-698
Cow position: chr10:27414223-27413933 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 169, 43

Conread position: 408-706
Cow position: chr10:34450414-34450708 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 44

Conread position: 413-589
Cow position: chr10:9862175-9862007 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 122, 17

Conread position: 413-593
Cow position: chr10:133356-133183 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 413-664
Cow position: chr10:60610968-60610718 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 124, 26

Conread position: 416-594
Cow position: chr10:25926831-25927008 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 158, 98

Conread position: 423-708
Cow position: chr10:63689971-63690256 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 27, 89

Conread position: 426-706
Cow position: chr10:31397495-31397769 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 147, 84

Conread position: 464-594
Cow position: chr10:33813847-33813721 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 470-589
Cow position: chr10:62889414-62889294 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 88

Conread position: 470-693
Cow position: chr10:7408248-7408468 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 104, 35

Conread position: 554-708
Cow position: chr10:19593495-19593341 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 11

Conread position: 325-480
Cow position: chr11:32391137-32390981 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 68

Conread position: 354-594
Cow position: chr11:39234756-39234520 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 356-468
Cow position: chr11:37729217-37729106 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 357-587
Cow position: chr11:4176631-4176419 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 173, 47

Conread position: 357-599
Cow position: chr11:9806425-9806659 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 53, 124

Conread position: 358-496
Cow position: chr11:72347021-72347159 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 116
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 358-513
Cow position: chr11:36258842-36258989 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 358-539
Cow position: chr11:7050164-7050343 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 54

Conread position: 358-547
Cow position: chr11:63678386-63678202 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 358-585
Cow position: chr11:11682893-11682664 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 60, 45

Conread position: 358-590
Cow position: chr11:18167384-18167607 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 358-594
Cow position: chr11:881510-881741 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 358-594
Cow position: chr11:37125237-37125470 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 358-594
Cow position: chr11:37330119-37329886 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 358-594
Cow position: chr11:37356206-37356439 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 72, 155

Conread position: 358-594
Cow position: chr11:39242997-39242765 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 360-443
Cow position: chr11:7550241-7550324 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 75
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 360-468
Cow position: chr11:39241410-39241302 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 360-479
Cow position: chr11:39204216-39204098 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 82, 74

Conread position: 360-579
Cow position: chr11:6604928-6604710 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 29

Conread position: 360-589
Cow position: chr11:31888443-31888212 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 80

Conread position: 360-591
Cow position: chr11:67774727-67774510 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 176, 44

Conread position: 360-593
Cow position: chr11:36901348-36901584 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 16

Conread position: 360-593
Cow position: chr11:51842321-51842544 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 176, 44

Conread position: 360-594
Cow position: chr11:5144373-5144605 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 29

Conread position: 360-594
Cow position: chr11:19703347-19703113 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 101

Conread position: 360-594
Cow position: chr11:41483271-41483495 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 362-446
Cow position: chr11:63664981-63664897 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 363-589
Cow position: chr11:8097860-8098084 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 166, 38

Conread position: 363-594
Cow position: chr11:85953440-85953226 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 364-594
Cow position: chr11:20423453-20423227 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 210, 132

Conread position: 365-594
Cow position: chr11:37398904-37399124 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 103, 77

Conread position: 365-605
Cow position: chr11:67966890-67967123 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 11

Conread position: 374-589
Cow position: chr11:4127469-4127259 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 149, 14

Conread position: 377-517
Cow position: chr11:42058110-42057969 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 390-593
Cow position: chr11:11602595-11602795 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 14

Conread position: 400-594
Cow position: chr11:12342506-12342696 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 171, 111

Conread position: 401-589
Cow position: chr11:5187624-5187437 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 153
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 116, 0

Conread position: 401-594
Cow position: chr11:5252402-5252595 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 403-706
Cow position: chr11:13857740-13857445 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 172, 111

Conread position: 405-572
Cow position: chr11:68403705-68403864 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 431-547
Cow position: chr11:33917770-33917654 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 104, 51

Conread position: 439-588
Cow position: chr11:39530656-39530510 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 96, 110

Conread position: 448-594
Cow position: chr11:63664620-63664478 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 607-723
Cow position: chr11:39874509-39874394 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 356-594
Cow position: chr12:9381914-9382144 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 357-594
Cow position: chr12:9956131-9955896 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 79, 43

Conread position: 358-474
Cow position: chr12:43226516-43226400 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 358-479
Cow position: chr12:8540557-8540436 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 358-539
Cow position: chr12:15178848-15178677 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 358-589
Cow position: chr12:2911295-2911063 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 68

Conread position: 358-592
Cow position: chr12:34408715-34408946 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 358-594
Cow position: chr12:8978573-8978804 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 359-613
Cow position: chr12:4541511-4541267 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 0

Conread position: 360-509
Cow position: chr12:43016172-43016021 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 360-593
Cow position: chr12:31622089-31621862 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 177, 49

Conread position: 360-594
Cow position: chr12:3016353-3016125 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 87, 0

Conread position: 360-594
Cow position: chr12:39571807-39572037 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 365-593
Cow position: chr12:43972382-43972603 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 401-594
Cow position: chr12:8259821-8259629 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 137, 92

Conread position: 414-594
Cow position: chr12:34772624-34772437 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 423-585
Cow position: chr12:21241849-21242007 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 458-708
Cow position: chr12:12216709-12216957 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 115, 53

Conread position: 464-589
Cow position: chr12:15364527-15364651 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 470-589
Cow position: chr12:8540211-8540093 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 519-693
Cow position: chr12:8541143-8540966 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 149

Conread position: 357-592
Cow position: chr13:17026478-17026250 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 58

Conread position: 357-594
Cow position: chr13:17968572-17968341 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 185, 31

Conread position: 358-510
Cow position: chr13:19214434-19214581 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 358-587
Cow position: chr13:33245015-33244787 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 213, 72

Conread position: 358-594
Cow position: chr13:30329906-30329682 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 358-602
Cow position: chr13:51924841-51925084 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 142

Conread position: 360-547
Cow position: chr13:47664229-47664041 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 57, 62

Conread position: 360-594
Cow position: chr13:15700878-15701104 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 0

Conread position: 360-625
Cow position: chr13:53189423-53189679 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 250, 28

Conread position: 362-578
Cow position: chr13:19282148-19282365 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 13, 192

Conread position: 362-616
Cow position: chr13:33321818-33322064 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 232, 13

Conread position: 365-593
Cow position: chr13:35026130-35026348 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 170, 39

Conread position: 365-593
Cow position: chr13:52288660-52288889 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 119

Conread position: 404-594
Cow position: chr13:33191227-33191413 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 169, 93

Conread position: 408-594
Cow position: chr13:45321276-45321461 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 150, 0

Conread position: 415-592
Cow position: chr13:45305064-45305239 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 24

Conread position: 419-706
Cow position: chr13:52190320-52190604 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 155, 92

Conread position: 460-594
Cow position: chr13:5248534-5248402 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 82

Conread position: 522-708
Cow position: chr13:48604797-48604980 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 52, 6

Conread position: 572-708
Cow position: chr13:12484444-12484308 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 93

Conread position: 329-695
Cow position: chr14:35408433-35408068 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 86

Conread position: 353-580
Cow position: chr14:3541516-3541299 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 177, 51

Conread position: 356-594
Cow position: chr14:44739724-44739954 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 357-586
Cow position: chr14:33158543-33158308 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 165

Conread position: 358-512
Cow position: chr14:3690125-3690275 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 358-594
Cow position: chr14:31969551-31969785 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 199, 156

Conread position: 358-594
Cow position: chr14:34208063-34207829 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 360-471
Cow position: chr14:25934483-25934371 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 80

Conread position: 360-513
Cow position: chr14:40069135-40068985 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 22, 14

Conread position: 360-574
Cow position: chr14:12337351-12337141 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 360-588
Cow position: chr14:27621913-27622131 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 175, 16

Conread position: 360-594
Cow position: chr14:5363285-5363519 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 360-594
Cow position: chr14:8807697-8807928 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 151

Conread position: 364-589
Cow position: chr14:9228663-9228438 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 364-594
Cow position: chr14:20891039-20890813 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 365-473
Cow position: chr14:3701566-3701674 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 366-512
Cow position: chr14:10487651-10487794 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 134, 22

Conread position: 366-582
Cow position: chr14:43081698-43081493 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 38

Conread position: 366-594
Cow position: chr14:24207423-24207668 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 368-560
Cow position: chr14:46525008-46524824 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 368-588
Cow position: chr14:46396751-46396967 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 368-606
Cow position: chr14:33156268-33156029 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 173, 36

Conread position: 388-512
Cow position: chr14:8197489-8197608 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 394-594
Cow position: chr14:48427442-48427628 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 400-594
Cow position: chr14:27622128-27622320 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 47

Conread position: 401-599
Cow position: chr14:23876956-23877143 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 164, 29

Conread position: 408-594
Cow position: chr14:16735623-16735443 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 162, 106

Conread position: 413-588
Cow position: chr14:10618750-10618575 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 27

Conread position: 413-589
Cow position: chr14:26622085-26621911 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 144
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 124, 13

Conread position: 413-593
Cow position: chr14:37033574-37033393 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 30, 24

Conread position: 451-587
Cow position: chr14:15963549-15963415 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 102

Conread position: 462-591
Cow position: chr14:25934261-25934131 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 464-590
Cow position: chr14:47680784-47680909 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 357-594
Cow position: chr15:1998766-1998992 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 358-514
Cow position: chr15:11809445-11809290 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 17

Conread position: 358-572
Cow position: chr15:26616710-26616919 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 105

Conread position: 358-594
Cow position: chr15:20127893-20128126 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 58

Conread position: 358-708
Cow position: chr15:3033541-3033199 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 229
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 30, 78

Conread position: 358-708
Cow position: chr15:8709445-8709802 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 190, 17

Conread position: 360-580
Cow position: chr15:10539609-10539832 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 64, 159

Conread position: 360-581
Cow position: chr15:14257995-14257782 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 175, 44

Conread position: 360-591
Cow position: chr15:234049-233805 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 56, 83

Conread position: 361-594
Cow position: chr15:52310961-52311197 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 115, 37

Conread position: 362-568
Cow position: chr15:17289258-17289067 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 362-572
Cow position: chr15:6173215-6173427 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 27, 168

Conread position: 364-572
Cow position: chr15:23079279-23079476 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 413-588
Cow position: chr15:11620609-11620443 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 423-589
Cow position: chr15:11347915-11348082 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 150, 133

Conread position: 423-594
Cow position: chr15:18788382-18788549 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 28, 49

Conread position: 465-593
Cow position: chr15:50293440-50293312 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 98

Conread position: 493-706
Cow position: chr15:28606108-28605898 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 81, 18

Conread position: 352-589
Cow position: chr16:23495687-23495931 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 93

Conread position: 354-588
Cow position: chr16:19262180-19262411 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 19, 62

Conread position: 357-589
Cow position: chr16:34131419-34131645 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 33

Conread position: 357-594
Cow position: chr16:33147782-33147552 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 358-544
Cow position: chr16:27974621-27974808 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 18

Conread position: 358-590
Cow position: chr16:8786713-8786944 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 358-594
Cow position: chr16:1632669-1632437 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 358-594
Cow position: chr16:20984997-20984757 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 156, 0

Conread position: 358-594
Cow position: chr16:26065659-26065422 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 358-594
Cow position: chr16:35411982-35412213 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 15, 58

Conread position: 358-594
Cow position: chr16:50545635-50545867 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 42, 54

Conread position: 359-594
Cow position: chr16:3892079-3891858 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 62, 29

Conread position: 360-520
Cow position: chr16:33709754-33709597 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 360-545
Cow position: chr16:32029453-32029273 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 175, 44

Conread position: 360-582
Cow position: chr16:37842300-37842090 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 175, 44

Conread position: 360-588
Cow position: chr16:43162655-43162871 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 175, 44

Conread position: 360-591
Cow position: chr16:7770387-7770163 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 16

Conread position: 360-592
Cow position: chr16:22240350-22240128 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 175, 44

Conread position: 361-498
Cow position: chr16:3854318-3854454 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 363-595
Cow position: chr16:56224035-56223808 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 13

Conread position: 364-510
Cow position: chr16:23384549-23384401 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 32

Conread position: 370-589
Cow position: chr16:200444-200230 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 6

Conread position: 370-589
Cow position: chr16:49726377-49726156 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 73

Conread position: 379-594
Cow position: chr16:10444357-10444131 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 28, 192

Conread position: 391-586
Cow position: chr16:43196442-43196253 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 400-594
Cow position: chr16:46377257-46377440 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 403-593
Cow position: chr16:10250725-10250538 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 139, 0

Conread position: 407-594
Cow position: chr16:54409359-54409177 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 45, 38

Conread position: 408-580
Cow position: chr16:46545348-46545516 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 107

Conread position: 415-676
Cow position: chr16:22245544-22245285 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 120, 23

Conread position: 424-594
Cow position: chr16:44522975-44522810 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 426-594
Cow position: chr16:30563362-30563198 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 426-594
Cow position: chr16:31703599-31703435 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 441-594
Cow position: chr16:36429990-36429842 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 126
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 444-612
Cow position: chr16:13126794-13126962 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 162

Conread position: 453-708
Cow position: chr16:30712668-30712923 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 105, 16

Conread position: 465-706
Cow position: chr16:9575132-9575374 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 46

Conread position: 466-602
Cow position: chr16:28755407-28755271 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 71, 97

Conread position: 473-707
Cow position: chr16:51098709-51098943 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 38

Conread position: 475-593
Cow position: chr16:19937360-19937244 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 358-581
Cow position: chr17:21591775-21591554 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 88, 0

Conread position: 358-589
Cow position: chr17:1325239-1325458 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 358-589
Cow position: chr17:1730237-1730467 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 358-589
Cow position: chr17:11072271-11072498 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 24, 17

Conread position: 358-592
Cow position: chr17:21585636-21585404 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 41, 138

Conread position: 358-594
Cow position: chr17:1491263-1491498 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 30

Conread position: 358-594
Cow position: chr17:4879196-4879430 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 358-594
Cow position: chr17:24861648-24861880 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 57, 0

Conread position: 358-609
Cow position: chr17:15483757-15483512 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 359-592
Cow position: chr17:27761190-27761412 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 178, 13

Conread position: 360-498
Cow position: chr17:25148103-25147965 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 360-539
Cow position: chr17:20347298-20347126 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 24

Conread position: 360-541
Cow position: chr17:22822983-22822806 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 6, 49

Conread position: 360-582
Cow position: chr17:41950365-41950573 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 175, 44

Conread position: 360-589
Cow position: chr17:16359943-16360168 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 214, 89

Conread position: 360-589
Cow position: chr17:27302347-27302119 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 169

Conread position: 360-589
Cow position: chr17:31562351-31562121 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 55, 81

Conread position: 360-593
Cow position: chr17:25546239-25546006 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 362-528
Cow position: chr17:24997363-24997197 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 362-594
Cow position: chr17:1756936-1756704 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 362-594
Cow position: chr17:38189914-38189690 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 363-580
Cow position: chr17:891695-891479 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 97

Conread position: 364-593
Cow position: chr17:11052005-11052237 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 199

Conread position: 369-601
Cow position: chr17:21461130-21461360 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 33

Conread position: 370-585
Cow position: chr17:10636398-10636179 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 72

Conread position: 377-622
Cow position: chr17:16380554-16380308 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 40, 64

Conread position: 382-594
Cow position: chr17:17641847-17641636 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 64, 97

Conread position: 399-704
Cow position: chr17:20194009-20193718 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 174, 70

Conread position: 400-543
Cow position: chr17:5347951-5347808 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 400-589
Cow position: chr17:24584050-24583861 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 67, 30

Conread position: 405-593
Cow position: chr17:11124388-11124201 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 408-512
Cow position: chr17:24988793-24988689 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 413-589
Cow position: chr17:11244533-11244708 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 103, 24

Conread position: 419-589
Cow position: chr17:6763136-6763309 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 143
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 146, 63

Conread position: 427-582
Cow position: chr17:34054058-34054211 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 28

Conread position: 428-589
Cow position: chr17:22836161-22835998 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 436-593
Cow position: chr17:2134755-2134601 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 92, 99

Conread position: 531-691
Cow position: chr17:30148907-30148749 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 30

Conread position: 357-703
Cow position: chr18:50288822-50288495 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 201, 32

Conread position: 358-528
Cow position: chr18:465167-464997 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 358-545
Cow position: chr18:15806276-15806461 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 60, 72

Conread position: 358-580
Cow position: chr18:43133835-43133616 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 58

Conread position: 358-594
Cow position: chr18:42986157-42985927 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 142, 155

Conread position: 358-706
Cow position: chr18:16351286-16351632 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 62

Conread position: 360-587
Cow position: chr18:5226885-5227099 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 360-593
Cow position: chr18:38904755-38904531 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 175, 44

Conread position: 360-594
Cow position: chr18:23470374-23470605 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 98

Conread position: 360-606
Cow position: chr18:4940450-4940209 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 5, 37

Conread position: 364-589
Cow position: chr18:29105700-29105478 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 218, 111

Conread position: 364-708
Cow position: chr18:37219885-37220222 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 208, 150

Conread position: 369-545
Cow position: chr18:7115241-7115072 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 89, 0

Conread position: 390-589
Cow position: chr18:14727760-14727560 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 33, 52

Conread position: 400-593
Cow position: chr18:21549309-21549501 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 20

Conread position: 405-593
Cow position: chr18:54945828-54945641 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 131, 35

Conread position: 422-588
Cow position: chr18:18990651-18990485 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 89, 15

Conread position: 429-593
Cow position: chr18:50301201-50301037 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 448-586
Cow position: chr18:12027760-12027621 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 125, 110

Conread position: 354-512
Cow position: chr19:21266654-21266809 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 130
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 357-594
Cow position: chr19:1065103-1065336 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 153, 0

Conread position: 358-594
Cow position: chr19:10552072-10551843 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 16

Conread position: 358-597
Cow position: chr19:45593939-45593704 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 139, 70

Conread position: 358-599
Cow position: chr19:13222157-13222392 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 360-575
Cow position: chr19:7671542-7671736 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 175, 44

Conread position: 360-591
Cow position: chr19:49165059-49164844 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 177, 44

Conread position: 360-593
Cow position: chr19:7879464-7879243 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 175, 41

Conread position: 365-586
Cow position: chr19:2819452-2819662 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 20

Conread position: 369-594
Cow position: chr19:27830215-27830441 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 46

Conread position: 401-706
Cow position: chr19:24089166-24088876 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 171, 110

Conread position: 403-589
Cow position: chr19:23666011-23666192 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 166, 31

Conread position: 407-607
Cow position: chr19:5633741-5633548 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 415-589
Cow position: chr19:17221511-17221335 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 144

Conread position: 418-593
Cow position: chr19:52753331-52753501 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 155, 8

Conread position: 444-705
Cow position: chr19:7589377-7589105 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 107

Conread position: 565-708
Cow position: chr19:47320710-47320858 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 104

Conread position: 719-900
Cow position: chr19:9810994-9811175 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 148
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 349-599
Cow position: chr2:43551206-43551454 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 147, 0

Conread position: 357-467
Cow position: chr2:64175580-64175471 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 357-594
Cow position: chr2:38838200-38837964 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 175, 157

Conread position: 358-473
Cow position: chr2:46215650-46215535 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 358-510
Cow position: chr2:66982058-66982210 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 358-556
Cow position: chr2:17862068-17862257 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 79, 61

Conread position: 358-567
Cow position: chr2:46939143-46939345 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 358-589
Cow position: chr2:46966719-46966950 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 358-589
Cow position: chr2:74693101-74692868 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 63

Conread position: 358-593
Cow position: chr2:46408844-46408612 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 34

Conread position: 358-593
Cow position: chr2:57381725-57381491 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 100

Conread position: 358-594
Cow position: chr2:16798919-16799152 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 58

Conread position: 358-594
Cow position: chr2:30639597-30639838 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 97, 53

Conread position: 358-594
Cow position: chr2:34328892-34328660 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 30, 155

Conread position: 358-594
Cow position: chr2:46025419-46025651 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 24

Conread position: 358-602
Cow position: chr2:12146245-12146482 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 359-588
Cow position: chr2:70829704-70829928 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 24, 60

Conread position: 360-517
Cow position: chr2:63042038-63041873 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 360-593
Cow position: chr2:71474966-71475183 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 360-594
Cow position: chr2:37076512-37076280 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 198, 0

Conread position: 360-594
Cow position: chr2:38871905-38872138 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 169, 36

Conread position: 360-594
Cow position: chr2:46008588-46008356 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 362-473
Cow position: chr2:45284195-45284306 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 362-593
Cow position: chr2:39579026-39579248 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 173, 42

Conread position: 362-684
Cow position: chr2:54443179-54442884 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 363-582
Cow position: chr2:45773281-45773489 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 81, 0

Conread position: 364-494
Cow position: chr2:28574453-28574583 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 364-574
Cow position: chr2:50138440-50138235 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 148, 0

Conread position: 364-575
Cow position: chr2:38897405-38897605 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 99, 0

Conread position: 364-594
Cow position: chr2:9937357-9937579 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 207, 16

Conread position: 365-594
Cow position: chr2:38876606-38876827 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 205, 36

Conread position: 370-594
Cow position: chr2:46773395-46773179 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 376-593
Cow position: chr2:54448633-54448847 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 39, 67

Conread position: 382-602
Cow position: chr2:44556669-44556450 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 160, 0

Conread position: 401-540
Cow position: chr2:86513782-86513644 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 403-708
Cow position: chr2:36856494-36856201 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 166, 40

Conread position: 403-708
Cow position: chr2:72404326-72404621 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 168, 22

Conread position: 407-585
Cow position: chr2:65399985-65400164 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 167, 151

Conread position: 409-545
Cow position: chr2:10970135-10969998 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 413-589
Cow position: chr2:7348231-7348055 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 124, 24

Conread position: 413-593
Cow position: chr2:41697501-41697680 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 117, 26

Conread position: 415-706
Cow position: chr2:66856328-66856037 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 157, 92

Conread position: 416-594
Cow position: chr2:1332390-1332565 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 419-708
Cow position: chr2:78797652-78797367 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 154, 13

Conread position: 460-586
Cow position: chr2:40048139-40048265 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 482-708
Cow position: chr2:38648031-38647812 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 92, 31

Conread position: 482-708
Cow position: chr2:56274083-56273856 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 91, 29

Conread position: 531-707
Cow position: chr2:19508399-19508222 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 121

Conread position: 358-510
Cow position: chr20:23760910-23761061 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 358-515
Cow position: chr20:20142744-20142591 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 358-572
Cow position: chr20:34264286-34264079 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 18

Conread position: 358-587
Cow position: chr20:35652273-35652497 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 135, 0

Conread position: 358-589
Cow position: chr20:19620866-19621104 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 59, 0

Conread position: 359-510
Cow position: chr20:36174697-36174546 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 359-589
Cow position: chr20:30748893-30748667 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 360-594
Cow position: chr20:3315139-3315369 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 213, 16

Conread position: 360-594
Cow position: chr20:7380987-7380756 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 213, 41

Conread position: 362-593
Cow position: chr20:34105898-34105667 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 142

Conread position: 364-589
Cow position: chr20:19124789-19124563 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 77

Conread position: 368-584
Cow position: chr20:27997439-27997640 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 167, 40

Conread position: 404-594
Cow position: chr20:37067522-37067336 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 65

Conread position: 411-594
Cow position: chr20:38558238-38558061 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 101, 0

Conread position: 423-548
Cow position: chr20:38659152-38659031 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 434-594
Cow position: chr20:35723214-35723375 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 107, 48

Conread position: 462-594
Cow position: chr20:13895125-13895259 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 351-593
Cow position: chr21:44721912-44722147 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 184, 19

Conread position: 355-593
Cow position: chr21:9207002-9206781 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 182, 62

Conread position: 355-594
Cow position: chr21:23639706-23639457 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 27, 42

Conread position: 357-480
Cow position: chr21:7074197-7074076 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 107
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 357-593
Cow position: chr21:16845227-16845009 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 178, 47

Conread position: 357-594
Cow position: chr21:24735406-24735164 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 15

Conread position: 358-527
Cow position: chr21:6326678-6326510 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 106, 0

Conread position: 358-593
Cow position: chr21:6134676-6134465 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 358-594
Cow position: chr21:8851085-8851324 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 131

Conread position: 358-594
Cow position: chr21:25592850-25592622 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 359-498
Cow position: chr21:41687969-41687842 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 359-503
Cow position: chr21:7747582-7747725 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 360-501
Cow position: chr21:41569424-41569285 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 360-565
Cow position: chr21:17933843-17933628 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 83

Conread position: 360-572
Cow position: chr21:45501862-45502069 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 170, 46

Conread position: 360-578
Cow position: chr21:34140261-34140472 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 175, 44

Conread position: 360-593
Cow position: chr21:15249855-15250078 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 177, 44

Conread position: 360-593
Cow position: chr21:20786028-20785790 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 208

Conread position: 360-593
Cow position: chr21:42475263-42475032 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 360-594
Cow position: chr21:41532400-41532629 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 360-601
Cow position: chr21:20186205-20185958 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 208

Conread position: 362-510
Cow position: chr21:12898619-12898766 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 362-583
Cow position: chr21:41548119-41547909 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 364-597
Cow position: chr21:7143632-7143414 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 24

Conread position: 365-612
Cow position: chr21:1184776-1184534 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 369-594
Cow position: chr21:47963476-47963259 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 384-594
Cow position: chr21:29200619-29200827 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 386-678
Cow position: chr21:8399936-8400225 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 188, 126

Conread position: 392-594
Cow position: chr21:35449700-35449497 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 127

Conread position: 393-594
Cow position: chr21:24207624-24207822 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 400-593
Cow position: chr21:34428408-34428598 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 134, 18

Conread position: 400-594
Cow position: chr21:20172582-20172394 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 405-708
Cow position: chr21:35695768-35695470 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 168, 102

Conread position: 408-640
Cow position: chr21:22512943-22512715 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 165, 99

Conread position: 409-589
Cow position: chr21:43623960-43623783 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 123, 78

Conread position: 409-594
Cow position: chr21:48595949-48595769 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 164, 78

Conread position: 410-594
Cow position: chr21:42169456-42169634 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 102, 0

Conread position: 414-594
Cow position: chr21:46767162-46766978 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 125, 0

Conread position: 423-609
Cow position: chr21:43626654-43626471 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 352-585
Cow position: chr22:1495003-1494766 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 46, 199

Conread position: 357-589
Cow position: chr22:29053472-29053242 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 34, 47

Conread position: 357-592
Cow position: chr22:5653585-5653362 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 358-509
Cow position: chr22:18484698-18484849 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 18

Conread position: 358-586
Cow position: chr22:3070207-3070431 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 171, 18

Conread position: 360-589
Cow position: chr22:31917435-31917660 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 73

Conread position: 361-509
Cow position: chr22:48302086-48301941 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 362-594
Cow position: chr22:5455299-5455070 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 178, 5

Conread position: 364-594
Cow position: chr22:3476406-3476183 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 61

Conread position: 382-544
Cow position: chr22:29050095-29049946 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 401-589
Cow position: chr22:22541793-22541606 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 170, 116

Conread position: 452-705
Cow position: chr22:5350544-5350294 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 116, 59

Conread position: 464-704
Cow position: chr22:4617277-4617034 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 206

Conread position: 572-706
Cow position: chr22:40405549-40405416 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 93

Conread position: 354-589
Cow position: chr23:37098732-37098967 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 26

Conread position: 354-592
Cow position: chr23:18271863-18272109 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 5

Conread position: 357-589
Cow position: chr23:5424703-5424932 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 46

Conread position: 357-591
Cow position: chr23:21730271-21730039 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 74

Conread position: 358-518
Cow position: chr23:3552533-3552373 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 134
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 358-572
Cow position: chr23:37136160-37135939 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 153

Conread position: 358-593
Cow position: chr23:13562483-13562248 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 358-594
Cow position: chr23:9728537-9728304 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 16, 58

Conread position: 359-509
Cow position: chr23:3531677-3531825 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 87, 0

Conread position: 359-594
Cow position: chr23:35974291-35974074 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 178, 45

Conread position: 360-587
Cow position: chr23:9463773-9463988 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 175, 16

Conread position: 360-587
Cow position: chr23:14159377-14159604 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 73

Conread position: 360-593
Cow position: chr23:1165055-1164823 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 360-593
Cow position: chr23:4506601-4506835 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 360-593
Cow position: chr23:39078309-39078090 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 175, 43

Conread position: 360-593
Cow position: chr23:39092584-39092804 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 175, 44

Conread position: 360-594
Cow position: chr23:4785709-4785955 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 10, 95

Conread position: 362-591
Cow position: chr23:37977323-37977093 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 118

Conread position: 364-594
Cow position: chr23:39032478-39032247 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 364-599
Cow position: chr23:2536485-2536711 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 376-594
Cow position: chr23:3521770-3521979 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 111, 0

Conread position: 406-593
Cow position: chr23:39491404-39491216 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 154

Conread position: 409-594
Cow position: chr23:20785713-20785896 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 164, 105

Conread position: 411-594
Cow position: chr23:21746933-21747109 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 103, 0

Conread position: 412-588
Cow position: chr23:10720226-10720054 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 161, 56

Conread position: 413-593
Cow position: chr23:14176835-14177013 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 9

Conread position: 420-589
Cow position: chr23:38426643-38426803 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 463-693
Cow position: chr23:15609922-15609692 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 110, 51

Conread position: 465-594
Cow position: chr23:38221786-38221912 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 570-709
Cow position: chr23:6591595-6591733 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 95

Conread position: 572-712
Cow position: chr23:35933550-35933407 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 96

Conread position: 355-594
Cow position: chr24:8399059-8398829 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 356-594
Cow position: chr24:39673321-39673555 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 70, 105

Conread position: 357-590
Cow position: chr24:16618396-16618166 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 216, 100

Conread position: 358-512
Cow position: chr24:26693612-26693458 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 358-594
Cow position: chr24:28829511-28829274 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 18

Conread position: 360-587
Cow position: chr24:18049237-18049452 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 175, 44

Conread position: 360-590
Cow position: chr24:27743287-27743065 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 177, 44

Conread position: 360-593
Cow position: chr24:30265402-30265173 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 213, 36

Conread position: 360-594
Cow position: chr24:2454611-2454389 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 57, 16

Conread position: 360-594
Cow position: chr24:28760390-28760618 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 210, 28

Conread position: 362-599
Cow position: chr24:40560825-40560596 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 229, 79

Conread position: 363-593
Cow position: chr24:39510964-39511183 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 37

Conread position: 370-586
Cow position: chr24:113336-113134 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 370-594
Cow position: chr24:5916567-5916787 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 383-588
Cow position: chr24:39798837-39798633 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 132

Conread position: 398-579
Cow position: chr24:2930350-2930169 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 106, 159

Conread position: 413-589
Cow position: chr24:21129421-21129596 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 19

Conread position: 415-706
Cow position: chr24:26679982-26679708 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 158, 80

Conread position: 445-678
Cow position: chr24:31047285-31047050 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 110

Conread position: 460-706
Cow position: chr24:13163377-13163626 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 96, 54

Conread position: 353-628
Cow position: chr25:22585492-22585232 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 5

Conread position: 357-486
Cow position: chr25:6067082-6066954 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 357-593
Cow position: chr25:16805806-16805578 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 172, 43

Conread position: 358-496
Cow position: chr25:5779389-5779522 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 39, 30

Conread position: 358-587
Cow position: chr25:7222043-7221816 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 41, 139

Conread position: 358-593
Cow position: chr25:36035207-36035443 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 186

Conread position: 358-594
Cow position: chr25:6130942-6131181 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 358-600
Cow position: chr25:26243733-26243497 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 360-546
Cow position: chr25:22809321-22809504 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 175, 62

Conread position: 360-546
Cow position: chr25:22816568-22816751 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 175, 62

Conread position: 360-602
Cow position: chr25:18009992-18009761 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 91, 43

Conread position: 361-588
Cow position: chr25:9152-8921 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 176

Conread position: 362-508
Cow position: chr25:21956319-21956174 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 362-569
Cow position: chr25:8544012-8544218 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 134
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 141, 0

Conread position: 365-589
Cow position: chr25:6260858-6260637 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 209, 149

Conread position: 365-602
Cow position: chr25:5783517-5783736 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 170, 38

Conread position: 368-594
Cow position: chr25:22569515-22569739 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 173, 0

Conread position: 371-594
Cow position: chr25:22597535-22597325 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 19

Conread position: 377-601
Cow position: chr25:11256309-11256089 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 49

Conread position: 380-594
Cow position: chr25:16155138-16155345 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 17, 134

Conread position: 392-594
Cow position: chr25:36075896-36075695 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 149, 99

Conread position: 400-589
Cow position: chr25:27495693-27495883 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 173, 158

Conread position: 404-589
Cow position: chr25:24605054-24604871 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 133, 15

Conread position: 413-593
Cow position: chr25:31246983-31246805 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 124, 27

Conread position: 414-555
Cow position: chr25:14530856-14530717 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 415-591
Cow position: chr25:10292204-10292379 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 120, 24

Conread position: 415-599
Cow position: chr25:24580525-24580708 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 150
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 40, 109

Conread position: 416-588
Cow position: chr25:25645104-25645272 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 434-594
Cow position: chr25:15456161-15456001 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 447-589
Cow position: chr25:16164338-16164476 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 88, 103

Conread position: 447-594
Cow position: chr25:11321358-11321213 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 449-594
Cow position: chr25:15656834-15656985 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 458-593
Cow position: chr25:21653613-21653478 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 105

Conread position: 357-609
Cow position: chr26:5717490-5717739 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 215, 24

Conread position: 357-636
Cow position: chr26:15530305-15530038 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 216, 31

Conread position: 358-572
Cow position: chr26:16049641-16049849 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 358-586
Cow position: chr26:19381655-19381885 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 219

Conread position: 358-594
Cow position: chr26:16446934-16447174 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 93

Conread position: 358-594
Cow position: chr26:20868257-20868019 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 159

Conread position: 360-528
Cow position: chr26:12271293-12271458 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 25, 60

Conread position: 360-592
Cow position: chr26:19175389-19175617 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 203, 108

Conread position: 360-593
Cow position: chr26:219066-219289 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 175, 44

Conread position: 360-593
Cow position: chr26:8093477-8093265 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 360-594
Cow position: chr26:30871877-30871647 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 364-587
Cow position: chr26:1070456-1070238 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 210, 62

Conread position: 364-593
Cow position: chr26:4827934-4827701 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 75

Conread position: 400-594
Cow position: chr26:16753631-16753441 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 8, 93

Conread position: 412-594
Cow position: chr26:9865085-9865267 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 161, 95

Conread position: 412-594
Cow position: chr26:9868758-9868935 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 145, 82

Conread position: 438-594
Cow position: chr26:27469939-27469781 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 131
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 111, 0

Conread position: 475-708
Cow position: chr26:9682222-9682449 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 100, 36

Conread position: 355-473
Cow position: chr27:23030892-23031007 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 357-539
Cow position: chr27:26444343-26444510 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 357-594
Cow position: chr27:29664557-29664790 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 172, 16

Conread position: 358-577
Cow position: chr27:24717791-24718009 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 360-570
Cow position: chr27:15106209-15106000 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 116

Conread position: 360-587
Cow position: chr27:29158829-29158606 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 15

Conread position: 360-593
Cow position: chr27:27714820-27715052 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 16

Conread position: 360-594
Cow position: chr27:26465557-26465325 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 72, 66

Conread position: 360-594
Cow position: chr27:26470355-26470127 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 28

Conread position: 360-594
Cow position: chr27:27412719-27412950 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 27, 155

Conread position: 371-594
Cow position: chr27:3794652-3794429 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 140, 43

Conread position: 429-589
Cow position: chr27:26124893-26125051 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 145, 0

Conread position: 434-594
Cow position: chr27:4498519-4498358 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 435-708
Cow position: chr27:13331780-13331522 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 79

Conread position: 436-619
Cow position: chr27:22727719-22727903 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 79

Conread position: 442-581
Cow position: chr27:26459459-26459323 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 72

Conread position: 448-594
Cow position: chr27:29521288-29521429 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 352-578
Cow position: chr28:10695613-10695396 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 72

Conread position: 358-582
Cow position: chr28:5414618-5414837 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 156, 0

Conread position: 358-594
Cow position: chr28:15982444-15982678 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 86, 48

Conread position: 358-708
Cow position: chr28:11097292-11097625 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 60

Conread position: 359-594
Cow position: chr28:4133542-4133771 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 51

Conread position: 360-496
Cow position: chr28:10778927-10778794 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 360-576
Cow position: chr28:5969326-5969116 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 360-581
Cow position: chr28:1286599-1286393 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 175, 43

Conread position: 360-588
Cow position: chr28:32152554-32152320 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 16

Conread position: 360-589
Cow position: chr28:11279426-11279214 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 360-589
Cow position: chr28:18714333-18714559 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 360-593
Cow position: chr28:1656631-1656854 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 44, 0

Conread position: 360-594
Cow position: chr28:9792725-9792956 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 153

Conread position: 360-594
Cow position: chr28:34761310-34761540 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 375-602
Cow position: chr28:87501-87275 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 26

Conread position: 377-594
Cow position: chr28:14214566-14214357 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 56

Conread position: 385-594
Cow position: chr28:18585018-18584813 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 125, 0

Conread position: 386-594
Cow position: chr28:23801993-23801798 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 104, 0

Conread position: 354-602
Cow position: chr29:44022144-44021893 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 87

Conread position: 355-594
Cow position: chr29:4245410-4245173 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 144

Conread position: 358-449
Cow position: chr29:3336770-3336860 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 358-511
Cow position: chr29:16336221-16336069 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 61

Conread position: 358-599
Cow position: chr29:45620078-45619843 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 207, 111

Conread position: 359-598
Cow position: chr29:13562155-13561917 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 136

Conread position: 360-473
Cow position: chr29:44696636-44696748 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 360-509
Cow position: chr29:1542116-1541962 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 83

Conread position: 360-546
Cow position: chr29:32939583-32939770 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 10

Conread position: 360-567
Cow position: chr29:29783649-29783859 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 360-588
Cow position: chr29:3841135-3840915 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 176, 44

Conread position: 360-588
Cow position: chr29:13386899-13386676 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 177, 58

Conread position: 360-593
Cow position: chr29:20672870-20673093 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 183
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 177, 44

Conread position: 361-589
Cow position: chr29:1627564-1627776 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 168, 0

Conread position: 362-592
Cow position: chr29:37996520-37996751 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 362-593
Cow position: chr29:4669067-4668834 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 77

Conread position: 364-582
Cow position: chr29:36055078-36055288 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 171, 40

Conread position: 367-512
Cow position: chr29:27058669-27058524 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 367-589
Cow position: chr29:11191250-11191035 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 75

Conread position: 368-594
Cow position: chr29:26737804-26738028 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 93, 64

Conread position: 369-594
Cow position: chr29:27060305-27060529 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 19

Conread position: 381-589
Cow position: chr29:24311787-24311993 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 37, 135

Conread position: 388-593
Cow position: chr29:37065068-37064873 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 147, 16

Conread position: 409-594
Cow position: chr29:33557486-33557653 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 413-588
Cow position: chr29:32149156-32149327 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 122, 26

Conread position: 419-594
Cow position: chr29:38865546-38865716 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 433-594
Cow position: chr29:26945971-26945813 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 439-586
Cow position: chr29:36478258-36478405 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 96, 120

Conread position: 450-594
Cow position: chr29:26644809-26644953 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 462-594
Cow position: chr29:2121161-2121292 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 533-708
Cow position: chr29:28016773-28016597 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 357-581
Cow position: chr3:19236890-19237113 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 137

Conread position: 357-593
Cow position: chr3:3643459-3643693 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 60, 83

Conread position: 357-594
Cow position: chr3:7865349-7865117 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 59

Conread position: 358-485
Cow position: chr3:58594680-58594553 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 122

Conread position: 358-586
Cow position: chr3:36415943-36416172 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 215, 200

Conread position: 358-589
Cow position: chr3:4126864-4127087 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 63, 0

Conread position: 358-589
Cow position: chr3:37256013-37256238 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 358-594
Cow position: chr3:7837484-7837708 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 29, 0

Conread position: 358-594
Cow position: chr3:19236493-19236258 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 156

Conread position: 358-594
Cow position: chr3:26586206-26586430 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 358-594
Cow position: chr3:27387701-27387951 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 180

Conread position: 358-594
Cow position: chr3:28926190-28926406 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 358-594
Cow position: chr3:75077029-75077248 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 359-594
Cow position: chr3:63270879-63270652 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 214, 29

Conread position: 360-586
Cow position: chr3:22703073-22702858 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 360-588
Cow position: chr3:19230132-19229917 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 175, 16

Conread position: 360-593
Cow position: chr3:14185473-14185242 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 57, 84

Conread position: 362-600
Cow position: chr3:52026591-52026823 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 364-594
Cow position: chr3:22699730-22699508 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 364-594
Cow position: chr3:23938415-23938647 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 45, 119

Conread position: 364-594
Cow position: chr3:69220193-69220413 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 12, 0

Conread position: 377-511
Cow position: chr3:35151154-35151021 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 380-501
Cow position: chr3:36543793-36543914 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 400-723
Cow position: chr3:548210-547891 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 173, 28

Conread position: 401-593
Cow position: chr3:74797379-74797569 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 402-600
Cow position: chr3:5052335-5052138 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 46

Conread position: 403-659
Cow position: chr3:7813401-7813658 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 169, 111

Conread position: 403-704
Cow position: chr3:84872176-84872469 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 170, 27

Conread position: 404-581
Cow position: chr3:68544151-68544322 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 170, 73

Conread position: 404-646
Cow position: chr3:2682750-2682982 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 161, 29

Conread position: 408-694
Cow position: chr3:28650082-28649800 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 165, 106

Conread position: 411-707
Cow position: chr3:47749557-47749851 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 106

Conread position: 413-593
Cow position: chr3:40567054-40567234 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 124, 24

Conread position: 414-576
Cow position: chr3:9255388-9255229 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 116, 25

Conread position: 415-594
Cow position: chr3:45839625-45839449 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 415-706
Cow position: chr3:41408071-41408354 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 159, 99

Conread position: 422-576
Cow position: chr3:7829836-7829991 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 149, 136

Conread position: 436-594
Cow position: chr3:33568037-33568191 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 448-588
Cow position: chr3:67815576-67815436 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 109

Conread position: 453-708
Cow position: chr3:81356044-81356294 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 37, 59

Conread position: 458-708
Cow position: chr3:43807878-43808126 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 115, 56

Conread position: 469-706
Cow position: chr3:668033-668266 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 104, 45

Conread position: 471-594
Cow position: chr3:58594330-58594208 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 549-692
Cow position: chr3:13565430-13565285 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 124

Conread position: 351-589
Cow position: chr4:40252470-40252696 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 37, 0

Conread position: 355-567
Cow position: chr4:12263092-12263295 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 128, 49

Conread position: 355-587
Cow position: chr4:61680512-61680741 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 63, 35

Conread position: 357-482
Cow position: chr4:11689731-11689858 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 358-498
Cow position: chr4:32366819-32366680 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 358-545
Cow position: chr4:5206196-5206379 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 8

Conread position: 358-573
Cow position: chr4:60941993-60941788 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 18

Conread position: 358-594
Cow position: chr4:5227940-5228173 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 15, 58

Conread position: 358-594
Cow position: chr4:12228071-12227840 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 58

Conread position: 358-594
Cow position: chr4:20316222-20316452 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 98, 89

Conread position: 358-594
Cow position: chr4:21614992-21615219 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 358-599
Cow position: chr4:6656577-6656336 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 18

Conread position: 358-609
Cow position: chr4:45986660-45986919 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 359-498
Cow position: chr4:26685950-26685814 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 360-588
Cow position: chr4:59866170-59866388 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 175, 36

Conread position: 360-594
Cow position: chr4:52119892-52119659 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 91, 40

Conread position: 361-501
Cow position: chr4:59065169-59065315 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 362-589
Cow position: chr4:20647802-20647588 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 362-594
Cow position: chr4:56412555-56412319 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 27, 53

Conread position: 364-556
Cow position: chr4:31180263-31180073 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 176, 150

Conread position: 365-498
Cow position: chr4:59205799-59205666 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 370-535
Cow position: chr4:14527239-14527399 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 380-594
Cow position: chr4:5265430-5265215 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 194, 167

Conread position: 400-594
Cow position: chr4:12263687-12263879 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 174, 68

Conread position: 400-706
Cow position: chr4:1918214-1917929 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 232, 69

Conread position: 402-706
Cow position: chr4:3671763-3672058 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 171, 92

Conread position: 403-706
Cow position: chr4:8131360-8131652 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 191, 108

Conread position: 463-594
Cow position: chr4:11691378-11691505 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 81

Conread position: 463-707
Cow position: chr4:19678216-19677986 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 112, 51

Conread position: 565-706
Cow position: chr4:17640573-17640714 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 46

Conread position: 352-510
Cow position: chr5:12785264-12785106 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 107, 94

Conread position: 355-498
Cow position: chr5:24886912-24887056 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 125
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 355-498
Cow position: chr5:24893350-24893493 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 125
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 72

Conread position: 356-690
Cow position: chr5:51576864-51576528 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 18

Conread position: 357-591
Cow position: chr5:44888183-44888417 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 82

Conread position: 357-599
Cow position: chr5:46862446-46862208 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 358-511
Cow position: chr5:19004414-19004262 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 358-588
Cow position: chr5:47997188-47996962 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 358-589
Cow position: chr5:22847146-22846919 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 215, 28

Conread position: 358-594
Cow position: chr5:8763566-8763798 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 61

Conread position: 358-594
Cow position: chr5:17044208-17043977 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 48, 0

Conread position: 359-496
Cow position: chr5:59088062-59088202 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 65, 81

Conread position: 360-498
Cow position: chr5:47960612-47960483 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 360-574
Cow position: chr5:68391561-68391771 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 172, 153

Conread position: 364-594
Cow position: chr5:18777974-18777750 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 12, 0

Conread position: 364-594
Cow position: chr5:27990770-27990545 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 41, 150

Conread position: 365-708
Cow position: chr5:43659785-43659449 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 101

Conread position: 365-708
Cow position: chr5:44114482-44114824 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 23

Conread position: 370-588
Cow position: chr5:30412686-30412897 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 71, 34

Conread position: 389-594
Cow position: chr5:2187190-2186989 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 182, 71

Conread position: 390-589
Cow position: chr5:67964575-67964769 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 58, 0

Conread position: 394-594
Cow position: chr5:40699274-40699072 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 140, 111

Conread position: 400-589
Cow position: chr5:31568308-31568119 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 92, 143

Conread position: 435-539
Cow position: chr5:22172980-22172876 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 439-593
Cow position: chr5:33715343-33715190 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 76, 66

Conread position: 470-708
Cow position: chr5:9329354-9329591 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 103, 56

Conread position: 486-706
Cow position: chr5:56634675-56634460 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 89, 25

Conread position: 492-706
Cow position: chr5:35622700-35622483 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 81, 35

Conread position: 493-708
Cow position: chr5:10886397-10886187 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 80, 21

Conread position: 519-706
Cow position: chr5:16054148-16053954 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 152

Conread position: 542-690
Cow position: chr5:24887055-24887204 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 123
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 353-497
Cow position: chr6:68572289-68572148 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 356-559
Cow position: chr6:42932115-42932316 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 91, 0

Conread position: 356-594
Cow position: chr6:20676005-20676241 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 76, 69

Conread position: 357-589
Cow position: chr6:22602025-22602253 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 358-473
Cow position: chr6:60062887-60063001 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 358-579
Cow position: chr6:44820067-44819849 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 98, 0

Conread position: 358-582
Cow position: chr6:49166802-49167032 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 131

Conread position: 358-587
Cow position: chr6:11087189-11086959 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 66, 185

Conread position: 358-587
Cow position: chr6:45338202-45338417 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 358-589
Cow position: chr6:60258485-60258716 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 202

Conread position: 358-593
Cow position: chr6:4066321-4066555 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 18

Conread position: 358-594
Cow position: chr6:23899089-23899321 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 59

Conread position: 358-594
Cow position: chr6:26224050-26224282 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 60, 70

Conread position: 358-602
Cow position: chr6:26207347-26207594 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 18

Conread position: 358-621
Cow position: chr6:61642758-61643016 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 150, 167

Conread position: 358-707
Cow position: chr6:21410856-21411201 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 32, 18

Conread position: 359-594
Cow position: chr6:16550736-16550967 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 76, 64

Conread position: 360-582
Cow position: chr6:67736619-67736404 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 175, 44

Conread position: 360-589
Cow position: chr6:19012396-19012173 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 181
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 54, 80

Conread position: 360-589
Cow position: chr6:36146630-36146410 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 8, 30

Conread position: 360-593
Cow position: chr6:60174642-60174876 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 59, 124

Conread position: 362-593
Cow position: chr6:58035595-58035826 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 364-528
Cow position: chr6:18788879-18789053 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 368-558
Cow position: chr6:14716683-14716860 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 374-493
Cow position: chr6:27047626-27047744 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 392-707
Cow position: chr6:45499425-45499721 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 179, 60

Conread position: 393-554
Cow position: chr6:26938107-26937951 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 112

Conread position: 399-594
Cow position: chr6:2869873-2870065 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 174, 115

Conread position: 400-589
Cow position: chr6:49544670-49544486 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 400-594
Cow position: chr6:44686471-44686286 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 405-527
Cow position: chr6:44697339-44697462 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 411-594
Cow position: chr6:5668066-5667872 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 133, 61

Conread position: 413-508
Cow position: chr6:27275072-27275167 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 413-582
Cow position: chr6:1012807-1012643 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 122, 26

Conread position: 470-704
Cow position: chr6:48376288-48376053 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 44, 34

Conread position: 587-708
Cow position: chr6:35548420-35548299 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 71

Conread position: 597-722
Cow position: chr6:58085664-58085785 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 357-589
Cow position: chr7:58445376-58445599 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 178, 47

Conread position: 357-592
Cow position: chr7:43051661-43051890 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 19

Conread position: 357-603
Cow position: chr7:23795246-23795000 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 73, 30

Conread position: 358-512
Cow position: chr7:44938432-44938270 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 358-581
Cow position: chr7:43870770-43870549 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 358-594
Cow position: chr7:3168768-3169003 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 204, 135

Conread position: 358-594
Cow position: chr7:3662971-3662745 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 58

Conread position: 358-594
Cow position: chr7:18108657-18108426 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 15, 58

Conread position: 358-594
Cow position: chr7:49094082-49094310 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 215, 31

Conread position: 358-599
Cow position: chr7:31117876-31118113 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 154, 0

Conread position: 358-610
Cow position: chr7:43568967-43569219 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 210, 173

Conread position: 359-592
Cow position: chr7:43899628-43899398 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 41

Conread position: 360-588
Cow position: chr7:32919265-32919493 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 156, 44

Conread position: 360-589
Cow position: chr7:23927874-23927633 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 360-591
Cow position: chr7:33468508-33468288 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 105, 44

Conread position: 360-593
Cow position: chr7:8606976-8606759 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 177, 43

Conread position: 360-593
Cow position: chr7:25967143-25967366 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 175, 44

Conread position: 360-593
Cow position: chr7:28335929-28336150 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 362-593
Cow position: chr7:21994486-21994263 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 102, 42

Conread position: 365-708
Cow position: chr7:25127095-25126759 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 149

Conread position: 374-594
Cow position: chr7:5343241-5343447 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 8, 46

Conread position: 382-593
Cow position: chr7:45939897-45940107 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 155, 22

Conread position: 394-563
Cow position: chr7:61510513-61510686 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 143, 0

Conread position: 400-594
Cow position: chr7:2127997-2128193 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 39

Conread position: 403-632
Cow position: chr7:21994038-21994254 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 189, 107

Conread position: 408-601
Cow position: chr7:32874344-32874534 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 24

Conread position: 410-594
Cow position: chr7:4699447-4699267 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 24

Conread position: 413-589
Cow position: chr7:14403021-14402846 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 122, 24

Conread position: 413-600
Cow position: chr7:52896785-52896597 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 124, 26

Conread position: 432-588
Cow position: chr7:47884161-47884010 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 26

Conread position: 464-708
Cow position: chr7:11647983-11648220 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 57

Conread position: 466-708
Cow position: chr7:11614485-11614251 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 90, 49

Conread position: 533-706
Cow position: chr7:67304468-67304641 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 132

Conread position: 560-706
Cow position: chr7:45598515-45598663 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 113

Conread position: 352-570
Cow position: chr8:7676660-7676873 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 102, 96

Conread position: 357-486
Cow position: chr8:4934890-4934761 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 357-594
Cow position: chr8:35511752-35511532 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 357-594
Cow position: chr8:54009604-54009828 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 358-510
Cow position: chr8:30550272-30550424 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 24

Conread position: 358-594
Cow position: chr8:6569095-6569325 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 358-594
Cow position: chr8:27827593-27827361 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 358-594
Cow position: chr8:49793208-49793446 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 84, 201

Conread position: 358-594
Cow position: chr8:50704833-50704586 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 74, 171

Conread position: 358-706
Cow position: chr8:11921840-11922182 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 73

Conread position: 359-589
Cow position: chr8:13847377-13847148 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 359-707
Cow position: chr8:55930053-55930398 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 43

Conread position: 360-584
Cow position: chr8:21056456-21056667 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 175, 44

Conread position: 360-589
Cow position: chr8:4127514-4127744 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 79

Conread position: 360-594
Cow position: chr8:1626270-1626504 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 28

Conread position: 360-602
Cow position: chr8:48978700-48978466 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 362-473
Cow position: chr8:51241555-51241444 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 365-497
Cow position: chr8:4052529-4052656 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 368-594
Cow position: chr8:26082675-26082454 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 0

Conread position: 368-594
Cow position: chr8:40324690-40324461 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 42, 140

Conread position: 370-588
Cow position: chr8:26829748-26829534 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 371-510
Cow position: chr8:38367653-38367514 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 371-578
Cow position: chr8:52022801-52022602 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 380-594
Cow position: chr8:5519004-5519213 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 389-589
Cow position: chr8:9294678-9294477 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 185, 169

Conread position: 392-593
Cow position: chr8:12840675-12840481 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 41

Conread position: 397-594
Cow position: chr8:13324161-13324349 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 181, 118

Conread position: 398-589
Cow position: chr8:5440289-5440467 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 175, 17

Conread position: 400-594
Cow position: chr8:33516531-33516337 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 159, 46

Conread position: 401-510
Cow position: chr8:45858177-45858287 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 405-706
Cow position: chr8:23094496-23094793 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 27, 21

Conread position: 414-594
Cow position: chr8:54315889-54315713 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 58, 41

Conread position: 420-590
Cow position: chr8:30563635-30563813 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 115, 17

Conread position: 420-594
Cow position: chr8:5655021-5655198 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 122, 92

Conread position: 424-708
Cow position: chr8:25582226-25581949 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 60

Conread position: 435-708
Cow position: chr8:830997-831258 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 138, 18

Conread position: 447-599
Cow position: chr8:33173188-33173335 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 463-587
Cow position: chr8:24628707-24628583 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 97

Conread position: 481-708
Cow position: chr8:44484302-44484525 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 14

Conread position: 519-708
Cow position: chr8:24631739-24631929 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 147

Conread position: 349-594
Cow position: chr9:41954028-41954265 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 131

Conread position: 357-512
Cow position: chr9:25800364-25800515 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 358-589
Cow position: chr9:9733438-9733209 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 109

Conread position: 358-589
Cow position: chr9:36396751-36396982 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 15

Conread position: 358-589
Cow position: chr9:51279836-51280067 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 59, 40

Conread position: 358-594
Cow position: chr9:25794376-25794608 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 90

Conread position: 358-594
Cow position: chr9:44609782-44610011 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 358-597
Cow position: chr9:64594616-64594388 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 215, 30

Conread position: 359-593
Cow position: chr9:36426073-36426306 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 56

Conread position: 359-706
Cow position: chr9:23518879-23518540 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 42

Conread position: 360-575
Cow position: chr9:7798552-7798764 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 360-588
Cow position: chr9:46090651-46090438 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 179, 44

Conread position: 360-589
Cow position: chr9:63662311-63662091 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 95, 57

Conread position: 360-593
Cow position: chr9:10290376-10290144 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 79

Conread position: 360-594
Cow position: chr9:6126964-6126741 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 20, 0

Conread position: 360-594
Cow position: chr9:6134096-6133867 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 360-594
Cow position: chr9:45406725-45406952 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 212, 42

Conread position: 362-566
Cow position: chr9:61851727-61851515 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 26

Conread position: 362-592
Cow position: chr9:21499745-21499524 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 174, 46

Conread position: 364-587
Cow position: chr9:15223890-15223668 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 364-594
Cow position: chr9:56294097-56294316 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 209, 135

Conread position: 366-528
Cow position: chr9:46990380-46990228 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 366-578
Cow position: chr9:25574551-25574750 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 16, 9

Conread position: 366-586
Cow position: chr9:6590059-6590281 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 369-558
Cow position: chr9:36681733-36681913 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 172, 35

Conread position: 384-594
Cow position: chr9:10160364-10160160 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 88, 130

Conread position: 400-594
Cow position: chr9:8847871-8848059 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 61

Conread position: 407-599
Cow position: chr9:5478707-5478889 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 412-593
Cow position: chr9:54107932-54107754 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 125, 27

Conread position: 418-607
Cow position: chr9:26528557-26528744 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 8, 130

Conread position: 434-589
Cow position: chr9:51276172-51276016 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 67, 0

Conread position: 469-580
Cow position: chr9:56082440-56082329 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 94

Conread position: 352-593
Cow position: chrX:38674911-38674669 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 24

Conread position: 357-510
Cow position: chrX:6999602-6999449 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 357-589
Cow position: chrX:3513268-3513498 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 74, 66

Conread position: 357-594
Cow position: chrX:29815820-29815585 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 358-504
Cow position: chrX:31910711-31910862 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 358-589
Cow position: chrX:1742931-1743165 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 100

Conread position: 358-589
Cow position: chrX:38741137-38740910 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 121

Conread position: 358-594
Cow position: chrX:34704450-34704677 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 204, 42

Conread position: 358-603
Cow position: chrX:27529607-27529366 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 129

Conread position: 359-567
Cow position: chrX:25180430-25180225 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 360-554
Cow position: chrX:40315860-40315666 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 159
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 58, 36

Conread position: 360-588
Cow position: chrX:12834978-12834760 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 14

Conread position: 360-589
Cow position: chrX:33159066-33158836 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 360-590
Cow position: chrX:34767793-34768041 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 195
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 360-594
Cow position: chrX:35981694-35981466 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 140, 0

Conread position: 360-601
Cow position: chrX:3450799-3451041 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 21

Conread position: 361-512
Cow position: chrX:10062244-10062093 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 124
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 361-563
Cow position: chrX:37251484-37251283 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 156

Conread position: 361-595
Cow position: chrX:16893598-16893368 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 362-591
Cow position: chrX:38129237-38129471 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 142

Conread position: 364-473
Cow position: chrX:23320511-23320402 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 364-509
Cow position: chrX:34635530-34635675 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 364-594
Cow position: chrX:19738131-19737911 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 205, 58

Conread position: 370-599
Cow position: chrX:832294-832071 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 371-582
Cow position: chrX:34213818-34213611 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 35

Conread position: 380-594
Cow position: chrX:29145479-29145269 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 132, 0

Conread position: 403-652
Cow position: chrX:28847810-28848055 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 104

Conread position: 407-539
Cow position: chrX:29539082-29538950 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 411-589
Cow position: chrX:36874174-36873999 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 131, 101

Conread position: 423-594
Cow position: chrX:25179639-25179475 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 424-542
Cow position: chrX:34626619-34626737 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 447-594
Cow position: chrX:23323112-23323253 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 448-594
Cow position: chrX:33008528-33008386 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 460-708
Cow position: chrX:19049128-19049377 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 84

Conread position: 482-593
Cow position: chrX:31911101-31911212 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 572-710
Cow position: chrX:42467666-42467528 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 61

Conread position: 590-708
Cow position: chrX:18080185-18080068 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 0