Cow genome map
| Conread name: | Ss1.1-Pig2-66G21.5 |
| Conread position: | 1367-1627 |
| Cow position: | chr10:9643114-9642855 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 1421-1599 |
| Cow position: | chr10:32934198-32934017 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1412-1601 |
| Cow position: | chr11:80149480-80149672 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 150 |
| Conread position: | 1419-1652 |
| Cow position: | chr11:50924603-50924370 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 53 |
| Conread position: | 1375-1547 |
| Cow position: | chr12:48469133-48468966 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 146, 45 |
| Conread position: | 1379-1601 |
| Cow position: | chr12:29746858-29747076 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 35 |
| Conread position: | 1419-1601 |
| Cow position: | chr12:27375814-27376002 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1368-1612 |
| Cow position: | chr13:8432500-8432737 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 1371-1601 |
| Cow position: | chr13:55033453-55033226 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 71, 44 |
| Conread position: | 1383-1594 |
| Cow position: | chr13:52595312-52595105 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 140, 40 |
| Conread position: | 1419-1606 |
| Cow position: | chr13:51822522-51822712 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1419-1617 |
| Cow position: | chr13:5541796-5541993 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 115 |
| Conread position: | 1399-1611 |
| Cow position: | chr14:44994858-44995072 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 107 |
| Conread position: | 1421-1611 |
| Cow position: | chr14:24706499-24706694 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1383-1595 |
| Cow position: | chr15:46668857-46669066 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 1410-1601 |
| Cow position: | chr15:33760528-33760720 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 168 |
| Conread position: | 1413-1599 |
| Cow position: | chr15:2059620-2059437 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 1421-1601 |
| Cow position: | chr15:22564349-22564528 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 149 |
| Conread position: | 1420-1607 |
| Cow position: | chr16:17026506-17026699 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 145 |
| Conread position: | 2-254 |
| Cow position: | chr17:10527117-10526856 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1384-1547 |
| Cow position: | chr17:4593822-4593666 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 1418-1601 |
| Cow position: | chr17:26314669-26314483 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 1409-1601 |
| Cow position: | chr18:19274216-19274014 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 1413-1601 |
| Cow position: | chr18:20662163-20662352 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 1422-1601 |
| Cow position: | chr18:32047019-32046843 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 116 |
| Conread position: | 1460-1612 |
| Cow position: | chr18:17718728-17718583 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1377-1611 |
| Cow position: | chr19:33234274-33234508 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 12, 32 |
| Conread position: | 1389-1611 |
| Cow position: | chr19:29630388-29630605 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 1429-1601 |
| Cow position: | chr19:40367984-40367811 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 91, 148 |
| Conread position: | 1359-1606 |
| Cow position: | chr21:1264470-1264230 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 56 |
| Conread position: | 1392-1601 |
| Cow position: | chr21:12704646-12704430 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 1348-1601 |
| Cow position: | chr22:37222081-37222325 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 180, 7 |
| Conread position: | 1419-1554 |
| Cow position: | chr22:10844745-10844882 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1419-1605 |
| Cow position: | chr22:38705014-38705208 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1441-1601 |
| Cow position: | chr22:12812785-12812945 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 154, 123 |
| Conread position: | 1458-1601 |
| Cow position: | chr22:8696541-8696397 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1376-1599 |
| Cow position: | chr23:35687652-35687874 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 70, 11 |
| Conread position: | 1383-1603 |
| Cow position: | chr23:30338644-30338424 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 1419-1599 |
| Cow position: | chr23:18219887-18220068 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 145 |
| Conread position: | 1420-1604 |
| Cow position: | chr23:22006901-22007086 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 1420-1629 |
| Cow position: | chr24:42136329-42136119 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 183 |
| Conread position: | 1335-1603 |
| Cow position: | chr25:30276422-30276155 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 1446-1601 |
| Cow position: | chr25:12768954-12769110 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1368-1611 |
| Cow position: | chr26:11789874-11789634 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 1373-1611 |
| Cow position: | chr26:22537545-22537775 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 148, 12 |
| Conread position: | 1408-1617 |
| Cow position: | chr27:16475201-16474991 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 1367-1634 |
| Cow position: | chr28:22382991-22382727 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 141, 15 |
| Conread position: | 1380-1599 |
| Cow position: | chr28:30376883-30376667 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 141, 37 |
| Conread position: | 1419-1606 |
| Cow position: | chr28:1571431-1571240 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 1345-1601 |
| Cow position: | chr29:33123930-33123675 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 1419-1595 |
| Cow position: | chr29:37432252-37432076 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 102, 22 |
| Conread position: | 1419-1606 |
| Cow position: | chr29:7078140-7078324 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 100, 17 |
| Conread position: | 1-1660 |
| Cow position: | chr7:607797-606112 (view UCSC Genome Browser custom track) |
| Alignm length: | 1723 |
| Alignm identity: | 1375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 437 |
| Conread position: | 1383-1605 |
| Cow position: | chr7:43905141-43904912 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1374-1607 |
| Cow position: | chr8:24752694-24752467 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 147, 46 |
| Conread position: | 1436-1605 |
| Cow position: | chr8:33481972-33482143 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1370-1606 |
| Cow position: | chr9:14179242-14179472 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 15 |
| Conread position: | 1368-1601 |
| Cow position: | chrX:33171791-33172023 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 33 |
| Conread position: | 1373-1600 |
| Cow position: | chrX:20591665-20591442 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 1374-1601 |
| Cow position: | chrX:18798897-18799120 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 1384-1601 |
| Cow position: | chrX:27418838-27419050 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 1414-1601 |
| Cow position: | chrX:42176883-42176698 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 107, 6 |
| Conread position: | 1435-1601 |
| Cow position: | chrX:507475-507643 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1447-1601 |
| Cow position: | chrX:20538098-20537944 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 74, 113 |