Cow genome map
| Conread name: | Ss1.1-Pig2-87E10.5 |
| Conread position: | 149-373 |
| Cow position: | chr15:48468459-48468683 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 122, 126 |
| Conread position: | 123-379 |
| Cow position: | chr17:44467857-44468113 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 49 |
| Conread position: | 125-408 |
| Cow position: | chr17:44467943-44468228 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 151-335 |
| Cow position: | chr17:41440678-41440494 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 2-379 |
| Cow position: | chr18:56391474-56391093 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 108 |
| Conread position: | 19-888 |
| Cow position: | chr18:54687637-54688502 (view UCSC Genome Browser custom track) |
| Alignm length: | 887 |
| Alignm identity: | 729 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 5 |
| Conread position: | 51-379 |
| Cow position: | chr18:54670339-54670010 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 91-376 |
| Cow position: | chr18:54669701-54669422 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 125-373 |
| Cow position: | chr18:56391095-56390847 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 125-379 |
| Cow position: | chr18:56391263-56391009 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-379 |
| Cow position: | chr18:56391515-56391261 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 54, 46 |
| Conread position: | 129-373 |
| Cow position: | chr18:55497282-55497038 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 43 |
| Conread position: | 143-333 |
| Cow position: | chr18:44818572-44818762 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 114 |
| Conread position: | 112-379 |
| Cow position: | chr21:12659070-12659336 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 13 |
| Conread position: | 125-378 |
| Cow position: | chr21:12659586-12659839 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 22 |
| Conread position: | 4-334 |
| Cow position: | chr25:33530353-33530687 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 130 |
| Conread position: | 6-362 |
| Cow position: | chr25:33530271-33530631 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 89 |
| Conread position: | 54-335 |
| Cow position: | chr25:3675922-3676199 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 125-335 |
| Cow position: | chr25:3663928-3664138 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 195, 191 |
| Conread position: | 125-373 |
| Cow position: | chr25:3676157-3676405 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 125-379 |
| Cow position: | chr25:33530562-33530816 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 131-333 |
| Cow position: | chr25:33529101-33529303 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 31 |
| Conread position: | 136-379 |
| Cow position: | chr25:25652868-25653111 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 32, 37 |
| Conread position: | 142-362 |
| Cow position: | chr25:25652286-25652506 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 143-379 |
| Cow position: | chr25:4657450-4657214 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 133, 128 |
| Conread position: | 149-379 |
| Cow position: | chr25:3676097-3676327 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 1-404 |
| Cow position: | chr3:20194326-20194722 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 126, 26 |
| Conread position: | 50-334 |
| Cow position: | chr3:20194733-20195012 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 238, 15 |
| Conread position: | 124-387 |
| Cow position: | chr3:20195054-20195317 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 14-333 |
| Cow position: | chr4:65703615-65703294 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 50-379 |
| Cow position: | chr4:65703656-65703332 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 131, 15 |
| Conread position: | 55-367 |
| Cow position: | chr4:65121717-65122024 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 104-367 |
| Cow position: | chr4:65146395-65146659 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 246 |
| Conread position: | 117-379 |
| Cow position: | chr4:65703679-65703416 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 149 |
| Conread position: | 123-333 |
| Cow position: | chr4:65121612-65121822 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 123-352 |
| Cow position: | chr4:65350292-65350518 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 34 |
| Conread position: | 103-379 |
| Cow position: | chr6:49428540-49428815 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 79, 21 |
| Conread position: | 108-361 |
| Cow position: | chr6:49428208-49428461 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-335 |
| Cow position: | chr6:49429233-49429443 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 67 |
| Conread position: | 125-379 |
| Cow position: | chr6:49428729-49428983 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 57 |
| Conread position: | 129-335 |
| Cow position: | chr6:49428649-49428855 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |