Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8002C22.3 |
| Conread position: | 1-497 |
| Cow position: | chr1:7501722-7502271 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 366 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 25, 21 |
| Conread position: | 342-501 |
| Cow position: | chr1:17642074-17641916 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 94 |
| Conread position: | 356-490 |
| Cow position: | chr1:37409128-37408996 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 80 |
| Conread position: | 393-888 |
| Cow position: | chr1:30110485-30110022 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 99 |
| Conread position: | 406-774 |
| Cow position: | chr1:96362155-96361797 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 117, 29 |
| Conread position: | 544-793 |
| Cow position: | chr1:37408916-37408689 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 544-889 |
| Cow position: | chr1:9441323-9440980 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 58 |
| Conread position: | 544-897 |
| Cow position: | chr1:39486893-39487247 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 544-897 |
| Cow position: | chr1:95403230-95402874 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 566-886 |
| Cow position: | chr1:21372581-21372898 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 575-857 |
| Cow position: | chr1:53515223-53515499 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 602-878 |
| Cow position: | chr1:17641665-17641386 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 128 |
| Conread position: | 1-897 |
| Cow position: | chr10:40623258-40624187 (view UCSC Genome Browser custom track) |
| Alignm length: | 944 |
| Alignm identity: | 609 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 158 |
| Conread position: | 406-692 |
| Cow position: | chr10:3739219-3739529 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 97, 215 |
| Conread position: | 544-674 |
| Cow position: | chr10:28770984-28770854 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 590-878 |
| Cow position: | chr10:21528334-21528618 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 13 |
| Conread position: | 590-878 |
| Cow position: | chr10:21545706-21545990 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 230, 13 |
| Conread position: | 661-859 |
| Cow position: | chr10:27742096-27741899 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 158, 60 |
| Conread position: | 661-897 |
| Cow position: | chr10:57100486-57100715 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 29, 68 |
| Conread position: | 665-900 |
| Cow position: | chr10:32122676-32122443 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 49 |
| Conread position: | 722-900 |
| Cow position: | chr10:36850932-36851108 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1-138 |
| Cow position: | chr11:24246249-24246384 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 192-497 |
| Cow position: | chr11:24246493-24246807 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 127, 80 |
| Conread position: | 345-490 |
| Cow position: | chr11:47174705-47174559 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 544-837 |
| Cow position: | chr11:10132913-10133197 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 545-773 |
| Cow position: | chr11:24246891-24247108 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 545-897 |
| Cow position: | chr11:47174472-47174121 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 56 |
| Conread position: | 609-900 |
| Cow position: | chr11:2438296-2438587 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 212, 14 |
| Conread position: | 661-838 |
| Cow position: | chr11:22728014-22728194 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 718-900 |
| Cow position: | chr11:58109418-58109601 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 101, 70 |
| Conread position: | 356-784 |
| Cow position: | chr12:23423521-23423069 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 544-897 |
| Cow position: | chr12:374574-374936 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 328 |
| Conread position: | 713-900 |
| Cow position: | chr12:17361733-17361539 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 50 |
| Conread position: | 718-900 |
| Cow position: | chr12:26723913-26724103 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 99, 49 |
| Conread position: | 741-871 |
| Cow position: | chr12:20221774-20221903 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 356-837 |
| Cow position: | chr13:12449963-12450482 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 544-859 |
| Cow position: | chr13:51917500-51917810 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 544-891 |
| Cow position: | chr13:41263489-41263165 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 717-860 |
| Cow position: | chr13:21117262-21117117 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 98, 7 |
| Conread position: | 401-885 |
| Cow position: | chr14:22088126-22087616 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 218 |
| Conread position: | 420-897 |
| Cow position: | chr14:4723865-4724354 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 276 |
| Conread position: | 638-892 |
| Cow position: | chr14:5564056-5563807 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 6, 138 |
| Conread position: | 661-895 |
| Cow position: | chr14:13983214-13982972 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 70, 149 |
| Conread position: | 667-851 |
| Cow position: | chr14:16574114-16573927 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 154, 20 |
| Conread position: | 739-900 |
| Cow position: | chr14:16840480-16840643 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 80, 62 |
| Conread position: | 3-210 |
| Cow position: | chr15:49192150-49191935 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 568-832 |
| Cow position: | chr15:32055537-32055787 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 347-497 |
| Cow position: | chr16:5686935-5686784 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 60, 106 |
| Conread position: | 544-779 |
| Cow position: | chr16:10186256-10186015 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 544-855 |
| Cow position: | chr16:46530796-46530483 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 57 |
| Conread position: | 544-891 |
| Cow position: | chr16:27961653-27962016 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 661-900 |
| Cow position: | chr16:27144218-27144465 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 709-896 |
| Cow position: | chr16:24686501-24686689 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 544-895 |
| Cow position: | chr17:24603976-24603621 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 59 |
| Conread position: | 642-864 |
| Cow position: | chr17:9085708-9085487 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 357-900 |
| Cow position: | chr18:43024615-43025182 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 228 |
| Conread position: | 361-500 |
| Cow position: | chr19:1800323-1800183 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 406-718 |
| Cow position: | chr19:32215006-32215347 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 224 |
| Conread position: | 654-860 |
| Cow position: | chr19:13088058-13088265 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 81 |
| Conread position: | 661-775 |
| Cow position: | chr19:1799594-1799479 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 710-885 |
| Cow position: | chr19:32215557-32215732 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 2-500 |
| Cow position: | chr2:36130702-36131216 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 348 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 63 |
| Conread position: | 356-497 |
| Cow position: | chr2:16282651-16282514 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 356-897 |
| Cow position: | chr2:7139793-7140357 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 390-858 |
| Cow position: | chr2:26194518-26194037 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 240 |
| Conread position: | 544-819 |
| Cow position: | chr2:36131292-36131571 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 114 |
| Conread position: | 661-896 |
| Cow position: | chr2:79191677-79191448 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 758-879 |
| Cow position: | chr2:16281999-16281879 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 109, 115 |
| Conread position: | 389-900 |
| Cow position: | chr20:27359155-27359659 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 219 |
| Conread position: | 544-766 |
| Cow position: | chr20:15313130-15312909 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 134 |
| Conread position: | 544-900 |
| Cow position: | chr20:27192423-27192074 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 28 |
| Conread position: | 568-713 |
| Cow position: | chr20:36935813-36935958 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 533-895 |
| Cow position: | chr21:29071086-29070743 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 81 |
| Conread position: | 661-896 |
| Cow position: | chr21:36446001-36446231 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 145, 38 |
| Conread position: | 189-497 |
| Cow position: | chr22:41379-41063 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 312 |
| Conread position: | 729-900 |
| Cow position: | chr22:40842-40663 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 88, 144 |
| Conread position: | 549-776 |
| Cow position: | chr23:25398701-25398470 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 104, 51 |
| Conread position: | 651-787 |
| Cow position: | chr23:12894054-12893918 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 717-832 |
| Cow position: | chr23:29283319-29283204 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 107 |
| Conread position: | 100-500 |
| Cow position: | chr24:6134602-6134191 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 192-501 |
| Cow position: | chr24:36849721-36849403 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 126, 52 |
| Conread position: | 532-889 |
| Cow position: | chr24:36849347-36848992 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 541-895 |
| Cow position: | chr24:6133838-6133510 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 544-786 |
| Cow position: | chr24:6191297-6191541 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 661-897 |
| Cow position: | chr24:37176383-37176141 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 160, 81 |
| Conread position: | 718-874 |
| Cow position: | chr24:7883116-7883277 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 88, 45 |
| Conread position: | 529-899 |
| Cow position: | chr25:18346952-18347323 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 72 |
| Conread position: | 608-885 |
| Cow position: | chr25:16827663-16827372 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 684-807 |
| Cow position: | chr25:15587687-15587563 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 390-645 |
| Cow position: | chr26:3000343-3000071 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 141 |
| Conread position: | 544-865 |
| Cow position: | chr26:4266997-4266678 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 58 |
| Conread position: | 544-890 |
| Cow position: | chr26:29174648-29174300 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 57 |
| Conread position: | 661-900 |
| Cow position: | chr26:3000088-2999857 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 675-896 |
| Cow position: | chr26:30280999-30280780 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 25-712 |
| Cow position: | chr27:8415560-8416273 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 217 |
| Conread position: | 500-897 |
| Cow position: | chr27:27157005-27156598 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 111 |
| Conread position: | 544-832 |
| Cow position: | chr27:4595432-4595715 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 56 |
| Conread position: | 544-897 |
| Cow position: | chr29:38012086-38012418 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 548-896 |
| Cow position: | chr29:36187836-36187491 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 58 |
| Conread position: | 557-897 |
| Cow position: | chr29:40149104-40148775 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 49 |
| Conread position: | 163-501 |
| Cow position: | chr3:31081254-31080897 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 349-497 |
| Cow position: | chr3:28152087-28151940 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 54, 50 |
| Conread position: | 503-896 |
| Cow position: | chr3:1811822-1811411 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 544-900 |
| Cow position: | chr3:28151854-28151508 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 661-777 |
| Cow position: | chr3:31080742-31080626 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 676-896 |
| Cow position: | chr3:2880706-2880923 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 68, 112 |
| Conread position: | 406-719 |
| Cow position: | chr4:29887577-29887280 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 542-696 |
| Cow position: | chr4:43754716-43754563 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 605-897 |
| Cow position: | chr4:68976278-68976555 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 637-897 |
| Cow position: | chr4:57078294-57078046 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 184, 94 |
| Conread position: | 694-886 |
| Cow position: | chr4:43754534-43754344 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-865 |
| Cow position: | chr5:53952380-53953271 (view UCSC Genome Browser custom track) |
| Alignm length: | 924 |
| Alignm identity: | 638 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 18 |
| Conread position: | 387-495 |
| Cow position: | chr5:38636427-38636536 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 447-874 |
| Cow position: | chr5:47052737-47052301 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 164 |
| Conread position: | 534-884 |
| Cow position: | chr5:37821631-37822009 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 265 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 36, 71 |
| Conread position: | 542-896 |
| Cow position: | chr5:55420979-55420639 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 585-900 |
| Cow position: | chr5:12578761-12578445 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 15 |
| Conread position: | 625-895 |
| Cow position: | chr5:72454643-72454361 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 145, 244 |
| Conread position: | 656-897 |
| Cow position: | chr5:38636867-38637113 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 204 |
| Conread position: | 661-859 |
| Cow position: | chr5:53687594-53687392 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 94 |
| Conread position: | 5-430 |
| Cow position: | chr6:38261417-38260961 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 301 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 362-895 |
| Cow position: | chr6:33398755-33398214 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 47 |
| Conread position: | 387-856 |
| Cow position: | chr6:36498225-36498684 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 46 |
| Conread position: | 390-897 |
| Cow position: | chr6:44643257-44643765 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 544-718 |
| Cow position: | chr6:41636783-41636609 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 544-801 |
| Cow position: | chr6:32132775-32133031 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 544-810 |
| Cow position: | chr6:11450005-11449750 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 544-885 |
| Cow position: | chr6:38260527-38260172 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 653-764 |
| Cow position: | chr6:42046126-42046238 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 661-900 |
| Cow position: | chr6:35363852-35363620 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 154, 62 |
| Conread position: | 661-900 |
| Cow position: | chr6:42711854-42712086 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 139, 36 |
| Conread position: | 712-886 |
| Cow position: | chr6:41636057-41635878 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 342-501 |
| Cow position: | chr7:51633360-51633200 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 356-500 |
| Cow position: | chr7:62524603-62524748 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 535-819 |
| Cow position: | chr7:51022663-51022381 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 66 |
| Conread position: | 656-880 |
| Cow position: | chr7:7654945-7655176 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 27 |
| Conread position: | 661-818 |
| Cow position: | chr7:62524914-62525071 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 102, 93 |
| Conread position: | 393-748 |
| Cow position: | chr8:16412232-16412573 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 99 |
| Conread position: | 555-895 |
| Cow position: | chr8:23107830-23108160 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 30 |
| Conread position: | 617-828 |
| Cow position: | chr8:24205214-24205415 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 202, 122 |
| Conread position: | 1-501 |
| Cow position: | chr9:2106432-2105877 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 368 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 16, 331 |
| Conread position: | 1-730 |
| Cow position: | chr9:1479857-1480597 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 172 |
| Conread position: | 387-501 |
| Cow position: | chr9:61310076-61309961 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 503-870 |
| Cow position: | chr9:2105853-2105479 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 103 |
| Conread position: | 544-838 |
| Cow position: | chr9:26234473-26234761 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 62 |
| Conread position: | 673-891 |
| Cow position: | chr9:41856038-41855823 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 144, 19 |
| Conread position: | 703-899 |
| Cow position: | chr9:12170482-12170284 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 127 |
| Conread position: | 708-826 |
| Cow position: | chr9:61309488-61309370 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 742-887 |
| Cow position: | chr9:1480709-1480852 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 128, 81 |
| Conread position: | 544-900 |
| Cow position: | chrX:42531745-42531391 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 601-767 |
| Cow position: | chrX:21850502-21850665 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 80, 62 |