Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8003C20.5 |
| Conread position: | 89-1194 |
| Cow position: | chr1:93219643-93218528 (view UCSC Genome Browser custom track) |
| Alignm length: | 1125 |
| Alignm identity: | 889 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 275-1193 |
| Cow position: | chr1:63254711-63255624 (view UCSC Genome Browser custom track) |
| Alignm length: | 924 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 306 |
| Conread position: | 39-191 |
| Cow position: | chr10:19088092-19087940 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 140 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 189-516 |
| Cow position: | chr10:19086812-19086485 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 512-682 |
| Cow position: | chr10:19085776-19085606 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 663-871 |
| Cow position: | chr10:19085497-19085289 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 864-1051 |
| Cow position: | chr10:19084515-19084328 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1050-1365 |
| Cow position: | chr10:19083781-19083455 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 318-430 |
| Cow position: | chr11:9335607-9335719 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-516 |
| Cow position: | chr11:9335971-9336059 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 78 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-675 |
| Cow position: | chr11:9337768-9337937 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 142 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 677-882 |
| Cow position: | chr11:9338702-9338906 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 864-1064 |
| Cow position: | chr11:9340532-9340732 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1050-1198 |
| Cow position: | chr11:9343069-9343217 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 129 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 81-1197 |
| Cow position: | chr16:36112546-36111436 (view UCSC Genome Browser custom track) |
| Alignm length: | 1119 |
| Alignm identity: | 663 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 600, 566 |
| Conread position: | 428-894 |
| Cow position: | chr19:45155242-45154777 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 446, 0 |
| Conread position: | 777-1135 |
| Cow position: | chr19:26728292-26727945 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 869-1051 |
| Cow position: | chr19:45154694-45154512 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 147 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1050-1195 |
| Cow position: | chr19:45154425-45154280 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 128 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-859 |
| Cow position: | chr22:38195947-38195390 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 350 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 277, 294 |
| Conread position: | 152-346 |
| Cow position: | chr24:27076001-27076197 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 175, 30 |
| Conread position: | 188-434 |
| Cow position: | chr25:37061288-37061534 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-871 |
| Cow position: | chr25:37061968-37062411 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-191 |
| Cow position: | chr26:5421830-5421675 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 189-325 |
| Cow position: | chr26:5420326-5420189 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 318-430 |
| Cow position: | chr26:5417264-5417152 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-516 |
| Cow position: | chr26:5414849-5414761 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 494-625 |
| Cow position: | chr26:14057000-14057131 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 507-682 |
| Cow position: | chr26:5414395-5414220 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 674-872 |
| Cow position: | chr26:5412437-5412239 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 869-1051 |
| Cow position: | chr26:5410967-5410785 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1050-1196 |
| Cow position: | chr26:5408175-5408029 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 128 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 62-191 |
| Cow position: | chr28:456078-456207 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 179-516 |
| Cow position: | chr28:456301-456637 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 513-684 |
| Cow position: | chr28:456737-456908 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 669-871 |
| Cow position: | chr28:456994-457196 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 869-1051 |
| Cow position: | chr28:457289-457471 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1050-1194 |
| Cow position: | chr28:457556-457700 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-1193 |
| Cow position: | chr3:54413015-54414137 (view UCSC Genome Browser custom track) |
| Alignm length: | 1123 |
| Alignm identity: | 891 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 78-1193 |
| Cow position: | chr7:14383840-14382734 (view UCSC Genome Browser custom track) |
| Alignm length: | 1122 |
| Alignm identity: | 635 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 569, 166 |