Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8004C14.3 |
| Conread position: | 9-156 |
| Cow position: | chr10:55172253-55172107 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 145-296 |
| Cow position: | chr10:55168909-55168758 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 294-405 |
| Cow position: | chr10:55168315-55168204 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 404-546 |
| Cow position: | chr10:55167710-55167568 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 542-733 |
| Cow position: | chr10:55166821-55166630 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 135, 129 |
| Conread position: | 728-865 |
| Cow position: | chr10:55166366-55166229 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 863-1044 |
| Cow position: | chr10:55165238-55165057 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 150 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 1040-1191 |
| Cow position: | chr10:55164309-55164158 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 132 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1257-1416 |
| Cow position: | chr10:55161408-55161249 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1419-1571 |
| Cow position: | chr10:55159778-55159626 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-151 |
| Cow position: | chr18:40814860-40814718 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-296 |
| Cow position: | chr18:40810829-40810678 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 404-562 |
| Cow position: | chr18:40808101-40807944 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 543-731 |
| Cow position: | chr18:40807873-40807685 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 167, 163 |
| Conread position: | 725-886 |
| Cow position: | chr18:40807584-40807423 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 860-1044 |
| Cow position: | chr18:40806434-40806250 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1043-1189 |
| Cow position: | chr18:40805516-40805370 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1257-1416 |
| Cow position: | chr18:40803485-40803326 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 53, 49 |
| Conread position: | 1419-1579 |
| Cow position: | chr18:40803219-40803059 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-146 |
| Cow position: | chr28:4911294-4911439 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 133 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-296 |
| Cow position: | chr28:4913291-4913442 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 138 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 297-405 |
| Cow position: | chr28:4917273-4917381 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 404-546 |
| Cow position: | chr28:4919486-4919628 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 132 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 545-732 |
| Cow position: | chr28:4921252-4921439 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 728-865 |
| Cow position: | chr28:4924232-4924369 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 133 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 863-1044 |
| Cow position: | chr28:4925291-4925472 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1037-1191 |
| Cow position: | chr28:4926341-4926496 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1257-1425 |
| Cow position: | chr28:4931395-4931563 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1415-1632 |
| Cow position: | chr28:4933055-4933268 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 184 |
| Conread position: | 9-138 |
| Cow position: | chr29:36978959-36978830 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-296 |
| Cow position: | chr29:36978404-36978253 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-546 |
| Cow position: | chr29:36977523-36977389 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 543-747 |
| Cow position: | chr29:36977130-36976925 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 737-865 |
| Cow position: | chr29:36976489-36976361 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 888-1044 |
| Cow position: | chr29:36976248-36976092 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1043-1191 |
| Cow position: | chr29:36975832-36975684 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1257-1406 |
| Cow position: | chr29:36975043-36974894 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 49, 60 |